health-data-standards 3.6.1 → 3.7.0

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Files changed (434) hide show
  1. checksums.yaml +4 -4
  2. data/Gemfile +7 -2
  3. data/Rakefile +2 -1
  4. data/lib/health-data-standards.rb +22 -1
  5. data/lib/health-data-standards/export/cat_1.rb +25 -6
  6. data/lib/health-data-standards/export/cat_1_r2.rb +8 -2
  7. data/lib/health-data-standards/export/cat_3.rb +8 -7
  8. data/lib/health-data-standards/export/exceptions.rb +13 -0
  9. data/lib/health-data-standards/export/helper/cat1_view_helper.rb +17 -11
  10. data/lib/health-data-standards/export/helper/html_view_helper.rb +13 -7
  11. data/lib/health-data-standards/export/helper/scooped_view_helper.rb +68 -25
  12. data/lib/health-data-standards/export/html.rb +9 -4
  13. data/lib/health-data-standards/export/qrda/entry_template_resolver.rb +29 -11
  14. data/lib/health-data-standards/export/qrda/hqmf-qrda-oids.json +89 -5
  15. data/lib/health-data-standards/export/rendering_context.rb +2 -2
  16. data/lib/health-data-standards/export/template_helper.rb +7 -2
  17. data/lib/health-data-standards/export/view_helper.rb +107 -39
  18. data/lib/health-data-standards/import/bulk_record_importer.rb +8 -5
  19. data/lib/health-data-standards/import/bundle/importer.rb +21 -14
  20. data/lib/health-data-standards/import/c32/care_goal_importer.rb +1 -1
  21. data/lib/health-data-standards/import/c32/immunization_importer.rb +1 -1
  22. data/lib/health-data-standards/import/cat1/clinical_trial_participant_importer.rb +20 -0
  23. data/lib/health-data-standards/import/cat1/device_order_importer.rb +20 -0
  24. data/lib/health-data-standards/import/cat1/diagnosis_active_importer.rb +4 -9
  25. data/lib/health-data-standards/import/cat1/diagnosis_importer.rb +15 -0
  26. data/lib/health-data-standards/import/cat1/diagnosis_inactive_importer.rb +1 -1
  27. data/lib/health-data-standards/import/cat1/diagnostic_study_order_importer.rb +6 -0
  28. data/lib/health-data-standards/import/cat1/encounter_order_act_importer.rb +19 -0
  29. data/lib/health-data-standards/import/cat1/encounter_performed_act_importer.rb +19 -0
  30. data/lib/health-data-standards/import/cat1/encounter_performed_importer.rb +16 -0
  31. data/lib/health-data-standards/import/cat1/immunization_administered_importer.rb +14 -0
  32. data/lib/health-data-standards/import/cat1/medication_dispensed_act_importer.rb +18 -0
  33. data/lib/health-data-standards/import/cat1/patient_importer.rb +44 -17
  34. data/lib/health-data-standards/import/cat1/procedure_order_importer.rb +4 -4
  35. data/lib/health-data-standards/import/cat1/procedure_performed_importer.rb +1 -0
  36. data/lib/health-data-standards/import/cat1/transfer_from_act_importer.rb +18 -0
  37. data/lib/health-data-standards/import/cat1/transfer_from_importer.rb +24 -0
  38. data/lib/health-data-standards/import/cat1/transfer_to_act_importer.rb +18 -0
  39. data/lib/health-data-standards/import/cat1/transfer_to_importer.rb +23 -0
  40. data/lib/health-data-standards/import/cda/allergy_importer.rb +1 -1
  41. data/lib/health-data-standards/import/cda/communication_importer.rb +55 -0
  42. data/lib/health-data-standards/import/cda/condition_importer.rb +17 -1
  43. data/lib/health-data-standards/import/cda/encounter_importer.rb +23 -21
  44. data/lib/health-data-standards/import/cda/medical_equipment_importer.rb +1 -0
  45. data/lib/health-data-standards/import/cda/medication_importer.rb +14 -4
  46. data/lib/health-data-standards/import/cda/procedure_importer.rb +4 -4
  47. data/lib/health-data-standards/import/cda/result_importer.rb +1 -1
  48. data/lib/health-data-standards/import/cda/section_importer.rb +59 -18
  49. data/lib/health-data-standards/models/assessment.rb +3 -0
  50. data/lib/health-data-standards/models/care_experience.rb +2 -0
  51. data/lib/health-data-standards/models/care_goal.rb +4 -0
  52. data/lib/health-data-standards/models/communication.rb +3 -0
  53. data/lib/health-data-standards/models/condition.rb +12 -9
  54. data/lib/health-data-standards/models/cqm/bundle.rb +2 -1
  55. data/lib/health-data-standards/models/cqm/measure.rb +2 -1
  56. data/lib/health-data-standards/models/cqm/patient_cache.rb +7 -3
  57. data/lib/health-data-standards/models/cqm/query_cache.rb +2 -0
  58. data/lib/health-data-standards/models/encounter.rb +14 -1
  59. data/lib/health-data-standards/models/encounter_principal_diagnosis.rb +36 -0
  60. data/lib/health-data-standards/models/entry.rb +5 -1
  61. data/lib/health-data-standards/models/family_history.rb +4 -0
  62. data/lib/health-data-standards/models/immunization.rb +1 -0
  63. data/lib/health-data-standards/models/lab_result.rb +10 -1
  64. data/lib/health-data-standards/models/medical_equipment.rb +2 -1
  65. data/lib/health-data-standards/models/medication.rb +19 -2
  66. data/lib/health-data-standards/models/patient_preference.rb +5 -0
  67. data/lib/health-data-standards/models/procedure.rb +16 -3
  68. data/lib/health-data-standards/models/provider.rb +17 -1
  69. data/lib/health-data-standards/models/provider_preference.rb +5 -0
  70. data/lib/health-data-standards/models/record.rb +8 -9
  71. data/lib/health-data-standards/models/reference.rb +1 -1
  72. data/lib/health-data-standards/models/svs/value_set.rb +28 -10
  73. data/lib/health-data-standards/models/transfer.rb +6 -1
  74. data/lib/health-data-standards/tasks/bundle.rake +5 -3
  75. data/lib/health-data-standards/util/hqmf_template_helper.rb +20 -14
  76. data/lib/health-data-standards/util/hqmfr2_template_oid_map.json +382 -0
  77. data/lib/health-data-standards/util/nlm_helper.rb +14 -0
  78. data/lib/health-data-standards/util/vs_api.rb +72 -54
  79. data/lib/health-data-standards/validate/measure_validator.rb +8 -3
  80. data/lib/health-data-standards/validate/performance_rate_validator.rb +1 -1
  81. data/lib/health-data-standards/validate/qrda_qdm_template_validator.rb +253 -0
  82. data/lib/health-data-standards/validate/reported_result_extractor.rb +5 -1
  83. data/lib/health-data-standards/validate/schematron_validator.rb +6 -0
  84. data/lib/health-data-standards/validate/validators.rb +49 -1
  85. data/lib/hqmf-generator/document.xml.erb +6 -5
  86. data/lib/hqmf-generator/field.xml.erb +1 -0
  87. data/lib/hqmf-generator/hqmf-generator.rb +85 -41
  88. data/lib/hqmf-generator/subset.xml.erb +15 -0
  89. data/lib/hqmf-generator/temporal_relationship.xml.erb +8 -3
  90. data/lib/hqmf-generator/temporal_relationship_attribute.xml.erb +10 -0
  91. data/lib/hqmf-generator/value.xml.erb +2 -2
  92. data/lib/hqmf-model/data_criteria.json +88 -17
  93. data/lib/hqmf-model/data_criteria.rb +144 -72
  94. data/lib/hqmf-model/population_criteria.rb +20 -18
  95. data/lib/hqmf-model/precondition.rb +6 -3
  96. data/lib/hqmf-model/types.rb +1 -1
  97. data/lib/hqmf-parser.rb +9 -0
  98. data/lib/hqmf-parser/1.0/utilities.rb +1 -1
  99. data/lib/hqmf-parser/2.0/data_criteria.rb +293 -319
  100. data/lib/hqmf-parser/2.0/data_criteria_helpers/dc_base_extract.rb +80 -0
  101. data/lib/hqmf-parser/2.0/data_criteria_helpers/dc_definition_from_template_or_type_extract.rb +201 -0
  102. data/lib/hqmf-parser/2.0/data_criteria_helpers/dc_post_processing.rb +85 -0
  103. data/lib/hqmf-parser/2.0/data_criteria_helpers/dc_specific_occurrences_and_source_data_criteria_extract.rb +117 -0
  104. data/lib/hqmf-parser/2.0/document.rb +246 -222
  105. data/lib/hqmf-parser/2.0/document_helpers/doc_population_helper.rb +175 -0
  106. data/lib/hqmf-parser/2.0/document_helpers/doc_utilities.rb +131 -0
  107. data/lib/hqmf-parser/2.0/field_value_helper.rb +251 -0
  108. data/lib/hqmf-parser/2.0/population_criteria.rb +101 -32
  109. data/lib/hqmf-parser/2.0/precondition.rb +61 -35
  110. data/lib/hqmf-parser/2.0/source_data_criteria_helper.rb +112 -0
  111. data/lib/hqmf-parser/2.0/types.rb +253 -73
  112. data/lib/hqmf-parser/2.0/utilities.rb +27 -12
  113. data/lib/hqmf-parser/2.0/value_set_helper.rb +101 -0
  114. data/lib/hqmf-parser/converter/pass1/data_criteria_converter.rb +6 -1
  115. data/lib/hqmf-parser/converter/pass1/population_criteria_converter.rb +34 -30
  116. data/lib/hqmf-parser/parser.rb +5 -5
  117. data/resources/schematron/qrda/cat_1/{CDAR2_QRDA_I_R1_D3_2015MAY_Schematron.sch → HL7_CDAR2_QRDA_Category_I_2_12_16.sch} +4692 -4675
  118. data/resources/schematron/qrda/cat_1_r3_1/HL7 QRDA Category I STU 3.1.sch +3573 -0
  119. data/resources/schematron/qrda/cat_1_r3_1/HL7 QRDA Category III STU 1.1.sch +464 -0
  120. data/resources/schematron/qrda/cat_1_r3_1/QRDA Category I STU Release 3.1.sch +5394 -0
  121. data/resources/schematron/qrda/cat_1_r3_1/voc.xml +1229 -0
  122. data/resources/schematron/qrda/cat_1_r4/HL7 QRDA Category I STU 4.sch +3526 -0
  123. data/resources/schematron/qrda/cat_1_r4/voc.xml +1186 -0
  124. data/resources/schematron/qrda/cat_3_r1_1/HL7 QRDA Category III STU 1.1.sch +528 -0
  125. data/resources/schematron/qrda/cat_3_r1_1/voc.xml +8 -0
  126. data/resources/schematron/qrda/cat_3_r2/HL7 QRDA Category III STU 2.sch +677 -0
  127. data/resources/schematron/qrda/cat_3_r2/voc.xml +1186 -0
  128. data/resources/schematron/qrda/cat_3_r2_1/HL7 QRDA Category III STU 2.1.sch +678 -0
  129. data/resources/schematron/qrda/cat_3_r2_1/voc.xml +1186 -0
  130. data/templates/c32/_medical_equipment.c32.erb +1 -1
  131. data/templates/c32/_vital_signs.c32.erb +1 -1
  132. data/templates/cat1/{_2.16.840.1.113883.10.20.22.4.85.cat1.erb → r2/_2.16.840.1.113883.10.20.22.4.85.cat1.erb} +1 -1
  133. data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.1.cat1.erb → r2/_2.16.840.1.113883.10.20.24.3.1.cat1.erb} +3 -3
  134. data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.101.cat1.erb → r2/_2.16.840.1.113883.10.20.24.3.101.cat1.erb} +1 -1
  135. data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.103.cat1.erb → r2/_2.16.840.1.113883.10.20.24.3.103.cat1.erb} +9 -5
  136. data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.105.cat1.erb → r2/_2.16.840.1.113883.10.20.24.3.105.cat1.erb} +18 -10
  137. data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.11.cat1.erb +88 -0
  138. data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.12.cat1.erb +50 -0
  139. data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.13.cat1.erb +54 -0
  140. data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.135.cat1.erb +70 -0
  141. data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.136.cat1.erb +52 -0
  142. data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.14.cat1.erb → r2/_2.16.840.1.113883.10.20.24.3.14.cat1.erb} +24 -6
  143. data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.140.cat1.erb +39 -0
  144. data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.17.cat1.erb +23 -0
  145. data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.18.cat1.erb +25 -0
  146. data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.2.cat1.erb +29 -0
  147. data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.20.cat1.erb → r2/_2.16.840.1.113883.10.20.24.3.20.cat1.erb} +4 -4
  148. data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.22.cat1.erb +22 -0
  149. data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.23.cat1.erb +114 -0
  150. data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.26.cat1.erb +20 -0
  151. data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.28.cat1.erb → r2/_2.16.840.1.113883.10.20.24.3.28.cat1.erb} +2 -2
  152. data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.3.cat1.erb +25 -0
  153. data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.31.cat1.erb +23 -0
  154. data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.32.cat1.erb +20 -0
  155. data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.34.cat1.erb → r2/_2.16.840.1.113883.10.20.24.3.34.cat1.erb} +6 -6
  156. data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.37.cat1.erb +22 -0
  157. data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.38.cat1.erb +20 -0
  158. data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.4.cat1.erb +29 -0
  159. data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.40.cat1.erb → r2/_2.16.840.1.113883.10.20.24.3.40.cat1.erb} +3 -3
  160. data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.41.cat1.erb +46 -0
  161. data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.42.cat1.erb +38 -0
  162. data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.43.cat1.erb +24 -0
  163. data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.44.cat1.erb +25 -0
  164. data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.45.cat1.erb +26 -0
  165. data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.46.cat1.erb +30 -0
  166. data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.47.cat1.erb +47 -0
  167. data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.51.cat1.erb +14 -0
  168. data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.54.cat1.erb +32 -0
  169. data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.55.cat1.erb → r2/_2.16.840.1.113883.10.20.24.3.55.cat1.erb} +0 -0
  170. data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.57.cat1.erb +23 -0
  171. data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.59.cat1.erb +22 -0
  172. data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.62.cat1.erb +36 -0
  173. data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.63.cat1.erb +21 -0
  174. data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.64.cat1.erb +52 -0
  175. data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.66.cat1.erb → r2/_2.16.840.1.113883.10.20.24.3.66.cat1.erb} +6 -6
  176. data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.69.cat1.erb +23 -0
  177. data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.7.cat1.erb +33 -0
  178. data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.76.cat1.erb → r2/_2.16.840.1.113883.10.20.24.3.76.cat1.erb} +5 -3
  179. data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.81.cat1.erb +23 -0
  180. data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.82.cat1.erb +23 -0
  181. data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.9.cat1.erb +64 -0
  182. data/templates/cat1/r2/_2.16.840.1.113883.10.20.28.3.6.cat1.erb +17 -0
  183. data/templates/cat1/{_address.cat1.erb → r2/_address.cat1.erb} +0 -0
  184. data/templates/cat1/{_author.cat1.erb → r2/_author.cat1.erb} +0 -0
  185. data/templates/cat1/r2/_fulfills.cat1.erb +14 -0
  186. data/templates/cat1/{_id.cat1.erb → r2/_id.cat1.erb} +0 -0
  187. data/templates/cat1/{_measures.cat1.erb → r2/_measures.cat1.erb} +1 -1
  188. data/templates/cat1/{_medication_details.cat1.erb → r2/_medication_details.cat1.erb} +3 -2
  189. data/templates/cat1/r2/_medication_dispense.cat1.erb +22 -0
  190. data/templates/cat1/{_ordinality.cat1.erb → r2/_ordinality.cat1.erb} +0 -0
  191. data/templates/cat1/{_organization.cat1.erb → r2/_organization.cat1.erb} +0 -0
  192. data/templates/cat1/{_patient_data.cat1.erb → r2/_patient_data.cat1.erb} +4 -1
  193. data/templates/cat1/r2/_patient_data_r3_1.cat1.erb +17 -0
  194. data/templates/cat1/r2/_providers.cat1.erb +76 -0
  195. data/templates/cat1/r2/_reason.cat1.erb +45 -0
  196. data/templates/cat1/{_record_target.cat1.erb → r2/_record_target.cat1.erb} +3 -0
  197. data/templates/cat1/r2/_reporting_parameters.cat1.erb +31 -0
  198. data/templates/cat1/{_result_value.cat1.erb → r2/_result_value.cat1.erb} +1 -1
  199. data/templates/cat1/{_telecom.cat1.erb → r2/_telecom.cat1.erb} +0 -0
  200. data/templates/cat1/{show.cat1.erb → r2/show.cat1.erb} +52 -5
  201. data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.1.cat1.erb +14 -0
  202. data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.103.cat1.erb +17 -0
  203. data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.105.cat1.erb +68 -0
  204. data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.11.cat1.erb +58 -0
  205. data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.12.cat1.erb → r3/_2.16.840.1.113883.10.20.24.3.12.cat1.erb} +4 -5
  206. data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.13.cat1.erb +39 -0
  207. data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.14.cat1.erb +39 -0
  208. data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.17.cat1.erb +23 -0
  209. data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.18.cat1.erb +25 -0
  210. data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.2.cat1.erb +29 -0
  211. data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.22.cat1.erb → r3/_2.16.840.1.113883.10.20.24.3.22.cat1.erb} +6 -5
  212. data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.23.cat1.erb → r3/_2.16.840.1.113883.10.20.24.3.23.cat1.erb} +26 -30
  213. data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.26.cat1.erb +20 -0
  214. data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.3.cat1.erb +25 -0
  215. data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.31.cat1.erb +23 -0
  216. data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.32.cat1.erb → r3/_2.16.840.1.113883.10.20.24.3.32.cat1.erb} +4 -4
  217. data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.37.cat1.erb +22 -0
  218. data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.38.cat1.erb → r3/_2.16.840.1.113883.10.20.24.3.38.cat1.erb} +3 -3
  219. data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.4.cat1.erb +29 -0
  220. data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.41.cat1.erb → r3/_2.16.840.1.113883.10.20.24.3.41.cat1.erb} +8 -10
  221. data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.42.cat1.erb +38 -0
  222. data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.43.cat1.erb +24 -0
  223. data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.44.cat1.erb +25 -0
  224. data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.45.cat1.erb → r3/_2.16.840.1.113883.10.20.24.3.45.cat1.erb} +5 -5
  225. data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.46.cat1.erb +30 -0
  226. data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.47.cat1.erb +47 -0
  227. data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.51.cat1.erb +14 -0
  228. data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.54.cat1.erb → r3/_2.16.840.1.113883.10.20.24.3.54.cat1.erb} +4 -4
  229. data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.55.cat1.erb +18 -0
  230. data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.57.cat1.erb +23 -0
  231. data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.59.cat1.erb +22 -0
  232. data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.62.cat1.erb +36 -0
  233. data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.63.cat1.erb → r3/_2.16.840.1.113883.10.20.24.3.63.cat1.erb} +6 -8
  234. data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.64.cat1.erb +51 -0
  235. data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.69.cat1.erb +23 -0
  236. data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.7.cat1.erb +33 -0
  237. data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.76.cat1.erb +19 -0
  238. data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.81.cat1.erb +24 -0
  239. data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.82.cat1.erb +24 -0
  240. data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.9.cat1.erb +57 -0
  241. data/templates/cat1/r3/_address.cat1.erb +9 -0
  242. data/templates/{cat3/_author.cat3.erb → cat1/r3/_author.cat1.erb} +0 -0
  243. data/templates/cat1/{_fulfills.cat1.erb → r3/_fulfills.cat1.erb} +0 -0
  244. data/templates/{cat3/_id.cat3.erb → cat1/r3/_id.cat1.erb} +0 -0
  245. data/templates/cat1/r3/_measures.cat1.erb +93 -0
  246. data/templates/cat1/r3/_medication_details.cat1.erb +16 -0
  247. data/templates/cat1/{_medication_dispense.cat1.erb → r3/_medication_dispense.cat1.erb} +3 -3
  248. data/templates/cat1/r3/_ordinality.cat1.erb +10 -0
  249. data/templates/cat1/r3/_organization.cat1.erb +9 -0
  250. data/templates/cat1/r3/_patient_data.cat1.erb +17 -0
  251. data/templates/cat1/r3/_providers.cat1.erb +76 -0
  252. data/templates/cat1/r3/_reason.cat1.erb +34 -0
  253. data/templates/cat1/r3/_record_target.cat1.erb +56 -0
  254. data/templates/cat1/r3/_reporting_parameters.cat1.erb +31 -0
  255. data/templates/cat1/r3/_result_value.cat1.erb +28 -0
  256. data/templates/{cat3/_telecom.cat3.erb → cat1/r3/_telecom.cat1.erb} +0 -0
  257. data/templates/cat1/r3/show.cat1.erb +183 -0
  258. data/templates/cat1/r3_1/_2.16.840.1.113883.10.20.24.3.1.cat1.erb +14 -0
  259. data/templates/cat1/r3_1/_2.16.840.1.113883.10.20.24.3.103.cat1.erb +17 -0
  260. data/templates/cat1/r3_1/_2.16.840.1.113883.10.20.24.3.105.cat1.erb +68 -0
  261. data/templates/cat1/r3_1/_2.16.840.1.113883.10.20.24.3.12.cat1.erb +53 -0
  262. data/templates/cat1/r3_1/_2.16.840.1.113883.10.20.24.3.135.cat1.erb +71 -0
  263. data/templates/cat1/r3_1/_2.16.840.1.113883.10.20.24.3.136.cat1.erb +52 -0
  264. data/templates/cat1/r3_1/_2.16.840.1.113883.10.20.24.3.140.cat1.erb +39 -0
  265. data/templates/cat1/r3_1/_2.16.840.1.113883.10.20.24.3.17.cat1.erb +23 -0
  266. data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.18.cat1.erb → r3_1/_2.16.840.1.113883.10.20.24.3.18.cat1.erb} +3 -3
  267. data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.2.cat1.erb → r3_1/_2.16.840.1.113883.10.20.24.3.2.cat1.erb} +2 -2
  268. data/templates/cat1/r3_1/_2.16.840.1.113883.10.20.24.3.22.cat1.erb +30 -0
  269. data/templates/cat1/r3_1/_2.16.840.1.113883.10.20.24.3.23.cat1.erb +116 -0
  270. data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.26.cat1.erb → r3_1/_2.16.840.1.113883.10.20.24.3.26.cat1.erb} +4 -2
  271. data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.3.cat1.erb → r3_1/_2.16.840.1.113883.10.20.24.3.3.cat1.erb} +2 -2
  272. data/templates/cat1/r3_1/_2.16.840.1.113883.10.20.24.3.31.cat1.erb +24 -0
  273. data/templates/cat1/r3_1/_2.16.840.1.113883.10.20.24.3.32.cat1.erb +21 -0
  274. data/templates/cat1/r3_1/_2.16.840.1.113883.10.20.24.3.37.cat1.erb +22 -0
  275. data/templates/cat1/r3_1/_2.16.840.1.113883.10.20.24.3.38.cat1.erb +21 -0
  276. data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.4.cat1.erb → r3_1/_2.16.840.1.113883.10.20.24.3.4.cat1.erb} +2 -2
  277. data/templates/cat1/r3_1/_2.16.840.1.113883.10.20.24.3.41.cat1.erb +45 -0
  278. data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.42.cat1.erb → r3_1/_2.16.840.1.113883.10.20.24.3.42.cat1.erb} +4 -4
  279. data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.43.cat1.erb → r3_1/_2.16.840.1.113883.10.20.24.3.43.cat1.erb} +3 -3
  280. data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.44.cat1.erb → r3_1/_2.16.840.1.113883.10.20.24.3.44.cat1.erb} +3 -3
  281. data/templates/cat1/r3_1/_2.16.840.1.113883.10.20.24.3.45.cat1.erb +35 -0
  282. data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.46.cat1.erb → r3_1/_2.16.840.1.113883.10.20.24.3.46.cat1.erb} +4 -4
  283. data/templates/cat1/r3_1/_2.16.840.1.113883.10.20.24.3.47.cat1.erb +47 -0
  284. data/templates/cat1/r3_1/_2.16.840.1.113883.10.20.24.3.51.cat1.erb +14 -0
  285. data/templates/cat1/r3_1/_2.16.840.1.113883.10.20.24.3.54.cat1.erb +32 -0
  286. data/templates/cat1/r3_1/_2.16.840.1.113883.10.20.24.3.55.cat1.erb +18 -0
  287. data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.57.cat1.erb → r3_1/_2.16.840.1.113883.10.20.24.3.57.cat1.erb} +3 -3
  288. data/templates/cat1/r3_1/_2.16.840.1.113883.10.20.24.3.59.cat1.erb +22 -0
  289. data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.62.cat1.erb → r3_1/_2.16.840.1.113883.10.20.24.3.62.cat1.erb} +5 -5
  290. data/templates/cat1/r3_1/_2.16.840.1.113883.10.20.24.3.63.cat1.erb +21 -0
  291. data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.64.cat1.erb → r3_1/_2.16.840.1.113883.10.20.24.3.64.cat1.erb} +7 -7
  292. data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.69.cat1.erb → r3_1/_2.16.840.1.113883.10.20.24.3.69.cat1.erb} +2 -2
  293. data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.7.cat1.erb → r3_1/_2.16.840.1.113883.10.20.24.3.7.cat1.erb} +12 -9
  294. data/templates/cat1/r3_1/_2.16.840.1.113883.10.20.24.3.81.cat1.erb +33 -0
  295. data/templates/cat1/r3_1/_2.16.840.1.113883.10.20.24.3.82.cat1.erb +33 -0
  296. data/templates/cat1/r3_1/_2.16.840.1.113883.10.20.24.3.9.cat1.erb +41 -0
  297. data/templates/cat1/r3_1/_2.16.840.1.113883.10.20.28.3.6.cat1.erb +17 -0
  298. data/templates/cat1/r3_1/_address.cat1.erb +9 -0
  299. data/templates/cat1/r3_1/_author.cat1.erb +28 -0
  300. data/templates/cat1/r3_1/_fulfills.cat1.erb +14 -0
  301. data/templates/cat1/r3_1/_id.cat1.erb +1 -0
  302. data/templates/cat1/r3_1/_measures.cat1.erb +93 -0
  303. data/templates/cat1/r3_1/_medication_details.cat1.erb +16 -0
  304. data/templates/cat1/r3_1/_medication_dispense.cat1.erb +22 -0
  305. data/templates/cat1/r3_1/_ordinality.cat1.erb +10 -0
  306. data/templates/cat1/r3_1/_organization.cat1.erb +9 -0
  307. data/templates/cat1/r3_1/_patient_data.cat1.erb +17 -0
  308. data/templates/cat1/r3_1/_providers.cat1.erb +76 -0
  309. data/templates/cat1/r3_1/_reason.cat1.erb +34 -0
  310. data/templates/cat1/r3_1/_record_target.cat1.erb +56 -0
  311. data/templates/cat1/r3_1/_reporting_parameters.cat1.erb +31 -0
  312. data/templates/cat1/r3_1/_result_value.cat1.erb +28 -0
  313. data/templates/cat1/r3_1/_telecom.cat1.erb +1 -0
  314. data/templates/cat1/r3_1/show.cat1.erb +183 -0
  315. data/templates/cat1/r4/_2.16.840.1.113883.10.20.24.3.1.cat1.erb +14 -0
  316. data/templates/cat1/r4/_2.16.840.1.113883.10.20.24.3.103.cat1.erb +17 -0
  317. data/templates/cat1/r4/_2.16.840.1.113883.10.20.24.3.105.cat1.erb +68 -0
  318. data/templates/cat1/r4/_2.16.840.1.113883.10.20.24.3.12.cat1.erb +53 -0
  319. data/templates/cat1/r4/_2.16.840.1.113883.10.20.24.3.135.cat1.erb +75 -0
  320. data/templates/cat1/r4/_2.16.840.1.113883.10.20.24.3.136.cat1.erb +52 -0
  321. data/templates/cat1/r4/_2.16.840.1.113883.10.20.24.3.140.cat1.erb +39 -0
  322. data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.59.cat1.erb → r4/_2.16.840.1.113883.10.20.24.3.144.cat1.erb} +6 -6
  323. data/templates/cat1/r4/_2.16.840.1.113883.10.20.24.3.145.cat1.erb +24 -0
  324. data/templates/cat1/r4/_2.16.840.1.113883.10.20.24.3.17.cat1.erb +23 -0
  325. data/templates/cat1/r4/_2.16.840.1.113883.10.20.24.3.18.cat1.erb +25 -0
  326. data/templates/cat1/r4/_2.16.840.1.113883.10.20.24.3.2.cat1.erb +29 -0
  327. data/templates/cat1/r4/_2.16.840.1.113883.10.20.24.3.22.cat1.erb +30 -0
  328. data/templates/cat1/r4/_2.16.840.1.113883.10.20.24.3.23.cat1.erb +116 -0
  329. data/templates/cat1/r4/_2.16.840.1.113883.10.20.24.3.3.cat1.erb +25 -0
  330. data/templates/cat1/r4/_2.16.840.1.113883.10.20.24.3.31.cat1.erb +24 -0
  331. data/templates/cat1/r4/_2.16.840.1.113883.10.20.24.3.32.cat1.erb +21 -0
  332. data/templates/cat1/r4/_2.16.840.1.113883.10.20.24.3.37.cat1.erb +22 -0
  333. data/templates/cat1/r4/_2.16.840.1.113883.10.20.24.3.38.cat1.erb +21 -0
  334. data/templates/cat1/r4/_2.16.840.1.113883.10.20.24.3.4.cat1.erb +29 -0
  335. data/templates/cat1/r4/_2.16.840.1.113883.10.20.24.3.41.cat1.erb +45 -0
  336. data/templates/cat1/r4/_2.16.840.1.113883.10.20.24.3.42.cat1.erb +38 -0
  337. data/templates/cat1/r4/_2.16.840.1.113883.10.20.24.3.43.cat1.erb +24 -0
  338. data/templates/cat1/r4/_2.16.840.1.113883.10.20.24.3.44.cat1.erb +25 -0
  339. data/templates/cat1/r4/_2.16.840.1.113883.10.20.24.3.45.cat1.erb +35 -0
  340. data/templates/cat1/r4/_2.16.840.1.113883.10.20.24.3.46.cat1.erb +30 -0
  341. data/templates/cat1/r4/_2.16.840.1.113883.10.20.24.3.47.cat1.erb +47 -0
  342. data/templates/cat1/r4/_2.16.840.1.113883.10.20.24.3.51.cat1.erb +14 -0
  343. data/templates/cat1/r4/_2.16.840.1.113883.10.20.24.3.54.cat1.erb +32 -0
  344. data/templates/cat1/r4/_2.16.840.1.113883.10.20.24.3.55.cat1.erb +18 -0
  345. data/templates/cat1/r4/_2.16.840.1.113883.10.20.24.3.57.cat1.erb +23 -0
  346. data/templates/cat1/r4/_2.16.840.1.113883.10.20.24.3.59.cat1.erb +22 -0
  347. data/templates/cat1/r4/_2.16.840.1.113883.10.20.24.3.62.cat1.erb +36 -0
  348. data/templates/cat1/r4/_2.16.840.1.113883.10.20.24.3.63.cat1.erb +21 -0
  349. data/templates/cat1/r4/_2.16.840.1.113883.10.20.24.3.64.cat1.erb +52 -0
  350. data/templates/cat1/r4/_2.16.840.1.113883.10.20.24.3.7.cat1.erb +33 -0
  351. data/templates/cat1/r4/_2.16.840.1.113883.10.20.24.3.81.cat1.erb +33 -0
  352. data/templates/cat1/r4/_2.16.840.1.113883.10.20.24.3.82.cat1.erb +33 -0
  353. data/templates/cat1/r4/_2.16.840.1.113883.10.20.24.3.9.cat1.erb +41 -0
  354. data/templates/cat1/r4/_2.16.840.1.113883.10.20.28.3.6.cat1.erb +17 -0
  355. data/templates/cat1/r4/_address.cat1.erb +7 -0
  356. data/templates/cat1/r4/_author.cat1.erb +28 -0
  357. data/templates/cat1/r4/_fulfills.cat1.erb +14 -0
  358. data/templates/cat1/r4/_id.cat1.erb +1 -0
  359. data/templates/cat1/r4/_measures.cat1.erb +93 -0
  360. data/templates/cat1/r4/_medication_details.cat1.erb +16 -0
  361. data/templates/cat1/r4/_medication_dispense.cat1.erb +22 -0
  362. data/templates/cat1/r4/_ordinality.cat1.erb +10 -0
  363. data/templates/cat1/r4/_organization.cat1.erb +9 -0
  364. data/templates/cat1/r4/_patient_data.cat1.erb +17 -0
  365. data/templates/cat1/r4/_providers.cat1.erb +76 -0
  366. data/templates/cat1/r4/_reason.cat1.erb +34 -0
  367. data/templates/cat1/r4/_record_target.cat1.erb +54 -0
  368. data/templates/cat1/r4/_reporting_parameters.cat1.erb +31 -0
  369. data/templates/cat1/r4/_result_value.cat1.erb +28 -0
  370. data/templates/cat1/r4/_telecom.cat1.erb +1 -0
  371. data/templates/cat1/r4/show.cat1.erb +192 -0
  372. data/templates/cat3/{_address.cat3.erb → r1/_address.cat3.erb} +0 -0
  373. data/templates/cat3/r1/_author.cat3.erb +28 -0
  374. data/templates/cat3/{_continuous_variable_value.cat3.erb → r1/_continuous_variable_value.cat3.erb} +0 -0
  375. data/templates/cat3/r1/_id.cat3.erb +1 -0
  376. data/templates/cat3/{_measure_data.cat3.erb → r1/_measure_data.cat3.erb} +7 -6
  377. data/templates/cat3/{_organization.cat3.erb → r1/_organization.cat3.erb} +0 -0
  378. data/templates/cat3/{_performance_rate.cat3.erb → r1/_performance_rate.cat3.erb} +1 -3
  379. data/templates/cat3/{_providers.cat3.erb → r1/_providers.cat3.erb} +0 -0
  380. data/templates/cat3/{_reporting_parameters.cat3.erb → r1/_reporting_parameters.cat3.erb} +0 -0
  381. data/templates/cat3/{_supplemental_data.cat3.erb → r1/_supplemental_data.cat3.erb} +2 -0
  382. data/templates/cat3/r1/_telecom.cat3.erb +1 -0
  383. data/templates/cat3/{show.cat3.erb → r1/show.cat3.erb} +5 -5
  384. data/templates/cat3/r1_1/_address.cat3.erb +9 -0
  385. data/templates/cat3/r1_1/_author.cat3.erb +28 -0
  386. data/templates/cat3/r1_1/_continuous_variable_value.cat3.erb +20 -0
  387. data/templates/cat3/r1_1/_id.cat3.erb +1 -0
  388. data/templates/cat3/r1_1/_measure_data.cat3.erb +136 -0
  389. data/templates/cat3/r1_1/_organization.cat3.erb +6 -0
  390. data/templates/cat3/r1_1/_performance_rate.cat3.erb +18 -0
  391. data/templates/{cat1/_providers.cat1.erb → cat3/r1_1/_providers.cat3.erb} +18 -18
  392. data/templates/{cat1/_reporting_parameters.cat1.erb → cat3/r1_1/_reporting_parameters.cat3.erb} +5 -1
  393. data/templates/cat3/r1_1/_supplemental_data.cat3.erb +38 -0
  394. data/templates/cat3/r1_1/_telecom.cat3.erb +1 -0
  395. data/templates/cat3/r1_1/show.cat3.erb +150 -0
  396. data/templates/cat3/r2/_address.cat3.erb +9 -0
  397. data/templates/cat3/r2/_author.cat3.erb +28 -0
  398. data/templates/cat3/r2/_continuous_variable_value.cat3.erb +20 -0
  399. data/templates/cat3/r2/_id.cat3.erb +1 -0
  400. data/templates/cat3/r2/_measure_data.cat3.erb +136 -0
  401. data/templates/cat3/r2/_organization.cat3.erb +6 -0
  402. data/templates/cat3/r2/_performance_rate.cat3.erb +19 -0
  403. data/templates/cat3/r2/_providers.cat3.erb +57 -0
  404. data/templates/cat3/r2/_reporting_parameters.cat3.erb +29 -0
  405. data/templates/cat3/r2/_supplemental_data.cat3.erb +38 -0
  406. data/templates/cat3/r2/_telecom.cat3.erb +1 -0
  407. data/templates/cat3/r2/show.cat3.erb +150 -0
  408. data/templates/cat3/r2_1/_address.cat3.erb +9 -0
  409. data/templates/cat3/r2_1/_author.cat3.erb +28 -0
  410. data/templates/cat3/r2_1/_continuous_variable_value.cat3.erb +20 -0
  411. data/templates/cat3/r2_1/_id.cat3.erb +1 -0
  412. data/templates/cat3/r2_1/_measure_data.cat3.erb +136 -0
  413. data/templates/cat3/r2_1/_organization.cat3.erb +6 -0
  414. data/templates/cat3/r2_1/_performance_rate.cat3.erb +19 -0
  415. data/templates/cat3/r2_1/_providers.cat3.erb +57 -0
  416. data/templates/cat3/r2_1/_reporting_parameters.cat3.erb +20 -0
  417. data/templates/cat3/r2_1/_reporting_parameters_act.cat3.erb +10 -0
  418. data/templates/cat3/r2_1/_supplemental_data.cat3.erb +38 -0
  419. data/templates/cat3/r2_1/_telecom.cat3.erb +1 -0
  420. data/templates/cat3/r2_1/show.cat3.erb +153 -0
  421. data/templates/ccda/_medical_equipment.ccda.erb +1 -1
  422. data/templates/ccda/_social_history.ccda.erb +2 -2
  423. data/templates/ccda/_vital_signs.ccda.erb +1 -1
  424. data/templates/html/_entries_by_section.html.erb +1 -1
  425. metadata +425 -153
  426. data/lib/health-data-standards/import/cat1/procedure_importer.rb +0 -42
  427. data/templates/cat1/_2.16.840.1.113883.10.20.24.3.11.cat1.erb +0 -55
  428. data/templates/cat1/_2.16.840.1.113883.10.20.24.3.13.cat1.erb +0 -38
  429. data/templates/cat1/_2.16.840.1.113883.10.20.24.3.17.cat1.erb +0 -22
  430. data/templates/cat1/_2.16.840.1.113883.10.20.24.3.31.cat1.erb +0 -22
  431. data/templates/cat1/_2.16.840.1.113883.10.20.24.3.37.cat1.erb +0 -20
  432. data/templates/cat1/_2.16.840.1.113883.10.20.24.3.47.cat1.erb +0 -27
  433. data/templates/cat1/_2.16.840.1.113883.10.20.24.3.51.cat1.erb +0 -13
  434. data/templates/cat1/_reason.cat1.erb +0 -23
data/lib/health-data-standards/import/cat1/procedure_importer.rb DELETED
@@ -1,42 +0,0 @@
1
- module HealthDataStandards
2
- module Import
3
- module Cat1
4
- class ProcedureImporter < CDA::ProcedureImporter
5
-
6
- def initialize(entry_finder=CDA::EntryFinder.new("./cda:entry/cda:act[cda:templateId/@root = '2.16.840.1.113883.10.20.24.3.4']"))
7
- super(entry_finder)
8
- @reference_xpath = "./sdtc:inFulfillmentOf1"
9
- end
10
-
11
- def create_entry(entry_element, nrh = CDA::NarrativeReferenceHandler.new)
12
- procedure = super
13
- extract_references(entry_element, procedure)
14
- procedure
15
- end
16
-
17
- private
18
-
19
- def extract_references(parent_element, entry)
20
- parent_element.xpath(@reference_xpath).each do |ref_xml|
21
- ref = Reference.new
22
- ref.type = case ref_xml.at_xpath("./@typeCode").value
23
- when "FLFS"
24
- "fulfills"
25
- end
26
- ref.referenced_type = case ref_xml.at_xpath("./sdtc:actReference/@classCode").value
27
- when "ACT"
28
- "Procedure"
29
- end
30
- id_element = ref_xml.at_xpath("./sdtc:actReference/sdtc:id")
31
- identifier = CDAIdentifier.new
32
- identifier.root = id_element['root']
33
- identifier.extension = id_element['extension']
34
- ref.referenced_id = identifier
35
- entry.references << ref
36
- end
37
- end
38
-
39
- end
40
- end
41
- end
42
- end
data/templates/cat1/_2.16.840.1.113883.10.20.24.3.11.cat1.erb DELETED
@@ -1,55 +0,0 @@
1
- <entry>
2
- <observation classCode="OBS" moodCode="EVN">
3
- <!-- Problem observation template -->
4
- <templateId root="2.16.840.1.113883.10.20.22.4.4"/>
5
- <!-- Diagnosis active template -->
6
- <templateId root="2.16.840.1.113883.10.20.24.3.11"/>
7
- <id root="1.3.6.1.4.1.115" extension="<%= entry.id %>"/>
8
- <code code="282291009" displayName="diagnosis" codeSystem="2.16.840.1.113883.6.96" codeSystemName="SNOMED-CT"/>
9
- <text><%= entry.description %></text>
10
- <statusCode code="completed"/>
11
- <effectiveTime>
12
- <!-- Attribute: admission datetime -->
13
- <low <%= value_or_null_flavor(entry.start_time) %>/>
14
- <!-- Attribute: discharge datetime -->
15
- <high <%= value_or_null_flavor(entry.end_time) %>/>
16
- </effectiveTime>
17
- <%== render(:partial => 'ordinality', :locals => {:entry => entry, :ordinality_oids=>field_oids["ORDINAL"]}) %>
18
-
19
- <%== code_display(entry, {'tag_name' => 'value', 'value_set_map' => value_set_map,'preferred_code_sets' => ['LOINC', 'SNOMED-CT', 'ICD-9-CM', 'ICD-10-CM'],
20
- 'extra_content' => "xsi:type=\"CD\" sdtc:valueSet=\"#{value_set_oid}\""}) %>
21
-
22
- <entryRelationship typeCode="REFR">
23
- <observation classCode="OBS" moodCode="EVN">
24
- <!-- Problem Status (consolidation) template -->
25
- <templateId root="2.16.840.1.113883.10.20.22.4.6"/>
26
- <!-- Problem Status, Active template -->
27
- <templateId root="2.16.840.1.113883.10.20.24.3.94"/>
28
- <id root="<%= UUID.generate %>"/>
29
- <code code="33999-4"
30
- codeSystem="2.16.840.1.113883.6.1"
31
- codeSystemName="LOINC"
32
- displayName="status"/>
33
- <statusCode code="completed"/>
34
- <value xsi:type="CD" code="55561003"
35
- displayName="active"
36
- codeSystem="2.16.840.1.113883.6.96"
37
- codeSystemName="SNOMED CT"/>
38
- </observation>
39
- </entryRelationship>
40
- <% if entry.severity
41
-
42
- %>
43
- <entryRelationship typeCode="REFR">
44
- <observation classCode="OBS" moodCode="EVN">
45
- <templateId root="2.16.840.1.113883.10.20.22.4.8"/>
46
- <code code="SEV"
47
- codeSystem="2.16.840.1.113883.5.4"/>
48
- <statusCode code="completed"/>
49
- <%== render(:partial => 'result_value', :locals => {:values => [entry.severity], :result_oids=>field_oids["SEVERITY"]} ) %>
50
- </observation>
51
-
52
- </entryRelationship>
53
- <% end %>
54
- </observation>
55
- </entry>
data/templates/cat1/_2.16.840.1.113883.10.20.24.3.13.cat1.erb DELETED
@@ -1,38 +0,0 @@
1
- <entry>
2
- <observation classCode="OBS" moodCode="EVN">
3
- <!-- Problem observation template -->
4
- <templateId root="2.16.840.1.113883.10.20.22.4.4"/>
5
- <!-- Diagnosis, inactive template -->
6
- <templateId root="2.16.840.1.113883.10.20.24.3.13"/>
7
- <id root="1.3.6.1.4.1.115" extension="<%= entry.id %>"/>
8
- <code code="282291009" codeSystem="2.16.840.1.113883.6.96" codeSystemName="SNOMED CT" displayName="diagnosis"/>
9
-
10
- <statusCode code="completed"/>
11
-
12
- <effectiveTime>
13
- <!-- Attribute: Start Datetime -->
14
- <low <%= value_or_null_flavor(entry.start_time) %>/>
15
- <!-- Attribute: Stop Datetime -->
16
- <high <%= value_or_null_flavor(entry.end_time) %>/>
17
- </effectiveTime>
18
- <%== render(:partial => 'ordinality', :locals => {:entry => entry, :ordinality_oids=>field_oids["ORDINAL"]}) %>
19
-
20
- <%== code_display(entry, 'value_set_map' => value_set_map,'tag_name' => 'value', 'preferred_code_sets' => ['SNOMED-CT', 'ICD-9-CM', 'ICD-10-CM', 'LOINC'], 'extra_content' => "xsi:type=\"CD\" sdtc:valueSet=\"#{value_set_oid}\"") %>
21
- <text><%= entry.description %></text>
22
- <!-- Status -->
23
- <entryRelationship typeCode="REFR">
24
- <observation classCode="OBS" moodCode="EVN">
25
- <!-- Problem Status (consolidation) template -->
26
- <templateId root="2.16.840.1.113883.10.20.22.4.6"/>
27
- <!-- Problem Status, Inactive template -->
28
- <templateId root="2.16.840.1.113883.10.20.24.3.95"/>
29
- <id root="<%= UUID.generate %>"/>
30
- <code code="33999-4" codeSystem="2.16.840.1.113883.6.1" codeSystemName="LOINC" displayName="status"/>
31
- <statusCode code="completed"/>
32
- <value code="73425007" codeSystem="2.16.840.1.113883.6.96" codeSystemName="SNOMED CT" displayName="inactive" xsi:type="CD"/>
33
- </observation>
34
-
35
- </entryRelationship>
36
-
37
- </observation>
38
- </entry>
data/templates/cat1/_2.16.840.1.113883.10.20.24.3.17.cat1.erb DELETED
@@ -1,22 +0,0 @@
1
- <entry>
2
- <observation classCode="OBS" moodCode="RQO">
3
- <!-- Consolidated Plan of Care Activity Observation
4
- templateId (Implied Template) -->
5
- <templateId root="2.16.840.1.113883.10.20.22.4.44"/>
6
- <!-- Diagnostic Study, Order template -->
7
- <templateId root="2.16.840.1.113883.10.20.24.3.17"/>
8
- <id root="1.3.6.1.4.1.115" extension="<%= entry.id %>"/>
9
- <%== code_display(entry, 'value_set_map' => value_set_map,'preferred_code_sets' => ['LOINC'], 'extra_content' => "sdtc:valueSet=\"#{value_set_oid}\"") %>
10
- <text><%= entry.description %></text>
11
- <statusCode code="new"/>
12
-
13
- <!-- Attribute: datetime -->
14
- <author>
15
- <time <%= value_or_null_flavor(entry.as_point_in_time) %>/>
16
- <assignedAuthor>
17
- <id nullFlavor="NA" root="<%= UUID.generate %>"/>
18
- </assignedAuthor>
19
- </author>
20
-
21
- </observation>
22
- </entry>
data/templates/cat1/_2.16.840.1.113883.10.20.24.3.31.cat1.erb DELETED
@@ -1,22 +0,0 @@
1
- <entry>
2
- <act classCode="ACT" moodCode="RQO">
3
- <!-- Plan of Care Activity Act template -->
4
- <templateId root="2.16.840.1.113883.10.20.22.4.39"/>
5
- <!-- Intervention Order template -->
6
- <templateId root="2.16.840.1.113883.10.20.24.3.31"/>
7
- <id root="1.3.6.1.4.1.115" extension="<%= entry.id %>"/>
8
- <%== code_display(entry,'value_set_map' => value_set_map, 'preferred_code_sets' => ['LOINC', 'SNOMED-CT', 'ICD-9-CM', 'ICD-10-CM'], 'extra_content' => "sdtc:valueSet=\"#{value_set_oid}\"") %>
9
- <text><%= entry.description %></text>
10
- <statusCode code="completed"/>
11
- <effectiveTime>
12
- <low <%= value_or_null_flavor(entry.start_time) %>/>
13
- </effectiveTime>
14
- <author>
15
- <time <%= value_or_null_flavor(entry.as_point_in_time) %>/>
16
- <assignedAuthor>
17
- <id root="<%= UUID.generate %>"/>
18
- </assignedAuthor>
19
- </author>
20
-
21
- </act>
22
- </entry>
data/templates/cat1/_2.16.840.1.113883.10.20.24.3.37.cat1.erb DELETED
@@ -1,20 +0,0 @@
1
- <entry>
2
- <observation classCode="OBS" moodCode="RQO">
3
- <!-- Consolidation Plan of Care Activity Observation -->
4
- <templateId root="2.16.840.1.113883.10.20.22.4.44"/>
5
- <!-- Lab Test Order -->
6
- <templateId root="2.16.840.1.113883.10.20.24.3.37"/>
7
- <id root="1.3.6.1.4.1.115" extension="<%= entry.id %>"/>
8
- <%== code_display(entry, 'value_set_map' => value_set_map, 'preferred_code_sets' => ['LOINC'], 'extra_content' => "sdtc:valueSet=\"#{value_set_oid}\"") %>
9
- <text><%= entry.description %></text>
10
- <statusCode code="new"/>
11
-
12
- <!-- Attribute: datetime -->
13
- <author>
14
- <time <%= value_or_null_flavor(entry.as_point_in_time) %>/>
15
- <assignedAuthor>
16
- <id nullFlavor="NA" root="<%= UUID.generate %>"/>
17
- </assignedAuthor>
18
- </author>
19
- </observation>
20
- </entry>
data/templates/cat1/_2.16.840.1.113883.10.20.24.3.47.cat1.erb DELETED
@@ -1,27 +0,0 @@
1
- <entry>
2
- <!--Medication Order -->
3
- <substanceAdministration classCode="SBADM" moodCode="RQO" <%== negation_indicator(entry) %>>
4
- <templateId root="2.16.840.1.113883.10.20.22.4.42"/>
5
- <!-- Medication, Order template -->
6
- <templateId root="2.16.840.1.113883.10.20.24.3.47"/>
7
- <id root="1.3.6.1.4.1.115" extension="<%= entry.id %>"/>
8
- <text><%= entry.description %></text>
9
- <statusCode code="new"/>
10
- <effectiveTime xsi:type="IVL_TS">
11
- <low <%= value_or_null_flavor(entry.start_time) %>/>
12
- <high <%= value_or_null_flavor(entry.end_time) %>/>
13
- </effectiveTime>
14
- <%== render(:partial => 'medication_details', :locals => {:entry => entry, :route_oids=>field_oids["ROUTE"]}) %>
15
- <consumable>
16
- <manufacturedProduct classCode="MANU">
17
- <!-- Medication Information (consolidation) template -->
18
- <templateId root="2.16.840.1.113883.10.20.22.4.23"/>
19
- <id root="<%= UUID.generate %>"/>
20
- <manufacturedMaterial>
21
- <%== code_display(entry, 'value_set_map' => value_set_map, 'preferred_code_sets' => ['RxNorm', 'SNOMED-CT'], 'extra_content' => "sdtc:valueSet=\"#{value_set_oid}\"") %>
22
- </manufacturedMaterial>
23
- </manufacturedProduct>
24
- </consumable>
25
- <%== render(:partial => 'reason', :locals => {:entry => entry, :reason_oids=>field_oids["REASON"]}) %>
26
- </substanceAdministration>
27
- </entry>
data/templates/cat1/_2.16.840.1.113883.10.20.24.3.51.cat1.erb DELETED
@@ -1,13 +0,0 @@
1
- <entry>
2
- <!-- Clinical Trial Participant -->
3
- <observation classCode="OBS" moodCode="EVN">
4
- <templateId root="2.16.840.1.113883.10.20.24.3.51"/>
5
- <id root="<%= UUID.generate %>"/>
6
- <code code="ASSERTION" codeSystem="2.16.840.1.113883.5.4"/>
7
- <statusCode code="active"/>
8
- <effectiveTime>
9
- <low value="20100101"/> <!-- Currently hardcoded to January 1, 2010 -->
10
- </effectiveTime>
11
- <value code="428024001" codeSystem="2.16.840.1.113883.6.96" codeSystemName="SNOMED CT" displayName="clinical trial participant" xsi:type="CD"/>
12
- </observation>
13
- </entry>
data/templates/cat1/_reason.cat1.erb DELETED
@@ -1,23 +0,0 @@
1
- <% if entry.negation_reason.present?
2
- vset = oid_for_code(entry.negation_reason,reason_oids, entry.record["bundle_id"])
3
- -%>
4
- <entryRelationship typeCode="RSON">
5
- <observation classCode="OBS" moodCode="EVN">
6
- <templateId root="2.16.840.1.113883.10.20.24.3.88"/>
7
- <id extension="<%= identifier_for([entry.negation_reason, entry.start_time]) %>" />
8
- <code code="410666004"
9
- codeSystem="2.16.840.1.113883.6.96"
10
- displayName="reason"
11
- codeSystemName="SNOMED CT"/>
12
- <statusCode code="completed"/>
13
- <effectiveTime <%= value_or_null_flavor(entry.start_time) %>/>
14
- <value xsi:type="CD"
15
- code="<%= entry.negation_reason['code'] %>"
16
- codeSystem="<%= HealthDataStandards::Util::CodeSystemHelper.oid_for_code_system(entry.negation_reason['codeSystem'] || entry.negation_reason['code_system']) %>"
17
- <% if vset -%>
18
- sdtc:valueSet="<%= vset %>"
19
- <% end -%>
20
- />
21
- </observation>
22
- </entryRelationship>
23
- <% end -%>