health-data-standards 3.6.1 → 3.7.0
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- checksums.yaml +4 -4
- data/Gemfile +7 -2
- data/Rakefile +2 -1
- data/lib/health-data-standards.rb +22 -1
- data/lib/health-data-standards/export/cat_1.rb +25 -6
- data/lib/health-data-standards/export/cat_1_r2.rb +8 -2
- data/lib/health-data-standards/export/cat_3.rb +8 -7
- data/lib/health-data-standards/export/exceptions.rb +13 -0
- data/lib/health-data-standards/export/helper/cat1_view_helper.rb +17 -11
- data/lib/health-data-standards/export/helper/html_view_helper.rb +13 -7
- data/lib/health-data-standards/export/helper/scooped_view_helper.rb +68 -25
- data/lib/health-data-standards/export/html.rb +9 -4
- data/lib/health-data-standards/export/qrda/entry_template_resolver.rb +29 -11
- data/lib/health-data-standards/export/qrda/hqmf-qrda-oids.json +89 -5
- data/lib/health-data-standards/export/rendering_context.rb +2 -2
- data/lib/health-data-standards/export/template_helper.rb +7 -2
- data/lib/health-data-standards/export/view_helper.rb +107 -39
- data/lib/health-data-standards/import/bulk_record_importer.rb +8 -5
- data/lib/health-data-standards/import/bundle/importer.rb +21 -14
- data/lib/health-data-standards/import/c32/care_goal_importer.rb +1 -1
- data/lib/health-data-standards/import/c32/immunization_importer.rb +1 -1
- data/lib/health-data-standards/import/cat1/clinical_trial_participant_importer.rb +20 -0
- data/lib/health-data-standards/import/cat1/device_order_importer.rb +20 -0
- data/lib/health-data-standards/import/cat1/diagnosis_active_importer.rb +4 -9
- data/lib/health-data-standards/import/cat1/diagnosis_importer.rb +15 -0
- data/lib/health-data-standards/import/cat1/diagnosis_inactive_importer.rb +1 -1
- data/lib/health-data-standards/import/cat1/diagnostic_study_order_importer.rb +6 -0
- data/lib/health-data-standards/import/cat1/encounter_order_act_importer.rb +19 -0
- data/lib/health-data-standards/import/cat1/encounter_performed_act_importer.rb +19 -0
- data/lib/health-data-standards/import/cat1/encounter_performed_importer.rb +16 -0
- data/lib/health-data-standards/import/cat1/immunization_administered_importer.rb +14 -0
- data/lib/health-data-standards/import/cat1/medication_dispensed_act_importer.rb +18 -0
- data/lib/health-data-standards/import/cat1/patient_importer.rb +44 -17
- data/lib/health-data-standards/import/cat1/procedure_order_importer.rb +4 -4
- data/lib/health-data-standards/import/cat1/procedure_performed_importer.rb +1 -0
- data/lib/health-data-standards/import/cat1/transfer_from_act_importer.rb +18 -0
- data/lib/health-data-standards/import/cat1/transfer_from_importer.rb +24 -0
- data/lib/health-data-standards/import/cat1/transfer_to_act_importer.rb +18 -0
- data/lib/health-data-standards/import/cat1/transfer_to_importer.rb +23 -0
- data/lib/health-data-standards/import/cda/allergy_importer.rb +1 -1
- data/lib/health-data-standards/import/cda/communication_importer.rb +55 -0
- data/lib/health-data-standards/import/cda/condition_importer.rb +17 -1
- data/lib/health-data-standards/import/cda/encounter_importer.rb +23 -21
- data/lib/health-data-standards/import/cda/medical_equipment_importer.rb +1 -0
- data/lib/health-data-standards/import/cda/medication_importer.rb +14 -4
- data/lib/health-data-standards/import/cda/procedure_importer.rb +4 -4
- data/lib/health-data-standards/import/cda/result_importer.rb +1 -1
- data/lib/health-data-standards/import/cda/section_importer.rb +59 -18
- data/lib/health-data-standards/models/assessment.rb +3 -0
- data/lib/health-data-standards/models/care_experience.rb +2 -0
- data/lib/health-data-standards/models/care_goal.rb +4 -0
- data/lib/health-data-standards/models/communication.rb +3 -0
- data/lib/health-data-standards/models/condition.rb +12 -9
- data/lib/health-data-standards/models/cqm/bundle.rb +2 -1
- data/lib/health-data-standards/models/cqm/measure.rb +2 -1
- data/lib/health-data-standards/models/cqm/patient_cache.rb +7 -3
- data/lib/health-data-standards/models/cqm/query_cache.rb +2 -0
- data/lib/health-data-standards/models/encounter.rb +14 -1
- data/lib/health-data-standards/models/encounter_principal_diagnosis.rb +36 -0
- data/lib/health-data-standards/models/entry.rb +5 -1
- data/lib/health-data-standards/models/family_history.rb +4 -0
- data/lib/health-data-standards/models/immunization.rb +1 -0
- data/lib/health-data-standards/models/lab_result.rb +10 -1
- data/lib/health-data-standards/models/medical_equipment.rb +2 -1
- data/lib/health-data-standards/models/medication.rb +19 -2
- data/lib/health-data-standards/models/patient_preference.rb +5 -0
- data/lib/health-data-standards/models/procedure.rb +16 -3
- data/lib/health-data-standards/models/provider.rb +17 -1
- data/lib/health-data-standards/models/provider_preference.rb +5 -0
- data/lib/health-data-standards/models/record.rb +8 -9
- data/lib/health-data-standards/models/reference.rb +1 -1
- data/lib/health-data-standards/models/svs/value_set.rb +28 -10
- data/lib/health-data-standards/models/transfer.rb +6 -1
- data/lib/health-data-standards/tasks/bundle.rake +5 -3
- data/lib/health-data-standards/util/hqmf_template_helper.rb +20 -14
- data/lib/health-data-standards/util/hqmfr2_template_oid_map.json +382 -0
- data/lib/health-data-standards/util/nlm_helper.rb +14 -0
- data/lib/health-data-standards/util/vs_api.rb +72 -54
- data/lib/health-data-standards/validate/measure_validator.rb +8 -3
- data/lib/health-data-standards/validate/performance_rate_validator.rb +1 -1
- data/lib/health-data-standards/validate/qrda_qdm_template_validator.rb +253 -0
- data/lib/health-data-standards/validate/reported_result_extractor.rb +5 -1
- data/lib/health-data-standards/validate/schematron_validator.rb +6 -0
- data/lib/health-data-standards/validate/validators.rb +49 -1
- data/lib/hqmf-generator/document.xml.erb +6 -5
- data/lib/hqmf-generator/field.xml.erb +1 -0
- data/lib/hqmf-generator/hqmf-generator.rb +85 -41
- data/lib/hqmf-generator/subset.xml.erb +15 -0
- data/lib/hqmf-generator/temporal_relationship.xml.erb +8 -3
- data/lib/hqmf-generator/temporal_relationship_attribute.xml.erb +10 -0
- data/lib/hqmf-generator/value.xml.erb +2 -2
- data/lib/hqmf-model/data_criteria.json +88 -17
- data/lib/hqmf-model/data_criteria.rb +144 -72
- data/lib/hqmf-model/population_criteria.rb +20 -18
- data/lib/hqmf-model/precondition.rb +6 -3
- data/lib/hqmf-model/types.rb +1 -1
- data/lib/hqmf-parser.rb +9 -0
- data/lib/hqmf-parser/1.0/utilities.rb +1 -1
- data/lib/hqmf-parser/2.0/data_criteria.rb +293 -319
- data/lib/hqmf-parser/2.0/data_criteria_helpers/dc_base_extract.rb +80 -0
- data/lib/hqmf-parser/2.0/data_criteria_helpers/dc_definition_from_template_or_type_extract.rb +201 -0
- data/lib/hqmf-parser/2.0/data_criteria_helpers/dc_post_processing.rb +85 -0
- data/lib/hqmf-parser/2.0/data_criteria_helpers/dc_specific_occurrences_and_source_data_criteria_extract.rb +117 -0
- data/lib/hqmf-parser/2.0/document.rb +246 -222
- data/lib/hqmf-parser/2.0/document_helpers/doc_population_helper.rb +175 -0
- data/lib/hqmf-parser/2.0/document_helpers/doc_utilities.rb +131 -0
- data/lib/hqmf-parser/2.0/field_value_helper.rb +251 -0
- data/lib/hqmf-parser/2.0/population_criteria.rb +101 -32
- data/lib/hqmf-parser/2.0/precondition.rb +61 -35
- data/lib/hqmf-parser/2.0/source_data_criteria_helper.rb +112 -0
- data/lib/hqmf-parser/2.0/types.rb +253 -73
- data/lib/hqmf-parser/2.0/utilities.rb +27 -12
- data/lib/hqmf-parser/2.0/value_set_helper.rb +101 -0
- data/lib/hqmf-parser/converter/pass1/data_criteria_converter.rb +6 -1
- data/lib/hqmf-parser/converter/pass1/population_criteria_converter.rb +34 -30
- data/lib/hqmf-parser/parser.rb +5 -5
- data/resources/schematron/qrda/cat_1/{CDAR2_QRDA_I_R1_D3_2015MAY_Schematron.sch → HL7_CDAR2_QRDA_Category_I_2_12_16.sch} +4692 -4675
- data/resources/schematron/qrda/cat_1_r3_1/HL7 QRDA Category I STU 3.1.sch +3573 -0
- data/resources/schematron/qrda/cat_1_r3_1/HL7 QRDA Category III STU 1.1.sch +464 -0
- data/resources/schematron/qrda/cat_1_r3_1/QRDA Category I STU Release 3.1.sch +5394 -0
- data/resources/schematron/qrda/cat_1_r3_1/voc.xml +1229 -0
- data/resources/schematron/qrda/cat_1_r4/HL7 QRDA Category I STU 4.sch +3526 -0
- data/resources/schematron/qrda/cat_1_r4/voc.xml +1186 -0
- data/resources/schematron/qrda/cat_3_r1_1/HL7 QRDA Category III STU 1.1.sch +528 -0
- data/resources/schematron/qrda/cat_3_r1_1/voc.xml +8 -0
- data/resources/schematron/qrda/cat_3_r2/HL7 QRDA Category III STU 2.sch +677 -0
- data/resources/schematron/qrda/cat_3_r2/voc.xml +1186 -0
- data/resources/schematron/qrda/cat_3_r2_1/HL7 QRDA Category III STU 2.1.sch +678 -0
- data/resources/schematron/qrda/cat_3_r2_1/voc.xml +1186 -0
- data/templates/c32/_medical_equipment.c32.erb +1 -1
- data/templates/c32/_vital_signs.c32.erb +1 -1
- data/templates/cat1/{_2.16.840.1.113883.10.20.22.4.85.cat1.erb → r2/_2.16.840.1.113883.10.20.22.4.85.cat1.erb} +1 -1
- data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.1.cat1.erb → r2/_2.16.840.1.113883.10.20.24.3.1.cat1.erb} +3 -3
- data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.101.cat1.erb → r2/_2.16.840.1.113883.10.20.24.3.101.cat1.erb} +1 -1
- data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.103.cat1.erb → r2/_2.16.840.1.113883.10.20.24.3.103.cat1.erb} +9 -5
- data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.105.cat1.erb → r2/_2.16.840.1.113883.10.20.24.3.105.cat1.erb} +18 -10
- data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.11.cat1.erb +88 -0
- data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.12.cat1.erb +50 -0
- data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.13.cat1.erb +54 -0
- data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.135.cat1.erb +70 -0
- data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.136.cat1.erb +52 -0
- data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.14.cat1.erb → r2/_2.16.840.1.113883.10.20.24.3.14.cat1.erb} +24 -6
- data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.140.cat1.erb +39 -0
- data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.17.cat1.erb +23 -0
- data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.18.cat1.erb +25 -0
- data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.2.cat1.erb +29 -0
- data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.20.cat1.erb → r2/_2.16.840.1.113883.10.20.24.3.20.cat1.erb} +4 -4
- data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.22.cat1.erb +22 -0
- data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.23.cat1.erb +114 -0
- data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.26.cat1.erb +20 -0
- data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.28.cat1.erb → r2/_2.16.840.1.113883.10.20.24.3.28.cat1.erb} +2 -2
- data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.3.cat1.erb +25 -0
- data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.31.cat1.erb +23 -0
- data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.32.cat1.erb +20 -0
- data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.34.cat1.erb → r2/_2.16.840.1.113883.10.20.24.3.34.cat1.erb} +6 -6
- data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.37.cat1.erb +22 -0
- data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.38.cat1.erb +20 -0
- data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.4.cat1.erb +29 -0
- data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.40.cat1.erb → r2/_2.16.840.1.113883.10.20.24.3.40.cat1.erb} +3 -3
- data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.41.cat1.erb +46 -0
- data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.42.cat1.erb +38 -0
- data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.43.cat1.erb +24 -0
- data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.44.cat1.erb +25 -0
- data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.45.cat1.erb +26 -0
- data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.46.cat1.erb +30 -0
- data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.47.cat1.erb +47 -0
- data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.51.cat1.erb +14 -0
- data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.54.cat1.erb +32 -0
- data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.55.cat1.erb → r2/_2.16.840.1.113883.10.20.24.3.55.cat1.erb} +0 -0
- data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.57.cat1.erb +23 -0
- data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.59.cat1.erb +22 -0
- data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.62.cat1.erb +36 -0
- data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.63.cat1.erb +21 -0
- data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.64.cat1.erb +52 -0
- data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.66.cat1.erb → r2/_2.16.840.1.113883.10.20.24.3.66.cat1.erb} +6 -6
- data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.69.cat1.erb +23 -0
- data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.7.cat1.erb +33 -0
- data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.76.cat1.erb → r2/_2.16.840.1.113883.10.20.24.3.76.cat1.erb} +5 -3
- data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.81.cat1.erb +23 -0
- data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.82.cat1.erb +23 -0
- data/templates/cat1/r2/_2.16.840.1.113883.10.20.24.3.9.cat1.erb +64 -0
- data/templates/cat1/r2/_2.16.840.1.113883.10.20.28.3.6.cat1.erb +17 -0
- data/templates/cat1/{_address.cat1.erb → r2/_address.cat1.erb} +0 -0
- data/templates/cat1/{_author.cat1.erb → r2/_author.cat1.erb} +0 -0
- data/templates/cat1/r2/_fulfills.cat1.erb +14 -0
- data/templates/cat1/{_id.cat1.erb → r2/_id.cat1.erb} +0 -0
- data/templates/cat1/{_measures.cat1.erb → r2/_measures.cat1.erb} +1 -1
- data/templates/cat1/{_medication_details.cat1.erb → r2/_medication_details.cat1.erb} +3 -2
- data/templates/cat1/r2/_medication_dispense.cat1.erb +22 -0
- data/templates/cat1/{_ordinality.cat1.erb → r2/_ordinality.cat1.erb} +0 -0
- data/templates/cat1/{_organization.cat1.erb → r2/_organization.cat1.erb} +0 -0
- data/templates/cat1/{_patient_data.cat1.erb → r2/_patient_data.cat1.erb} +4 -1
- data/templates/cat1/r2/_patient_data_r3_1.cat1.erb +17 -0
- data/templates/cat1/r2/_providers.cat1.erb +76 -0
- data/templates/cat1/r2/_reason.cat1.erb +45 -0
- data/templates/cat1/{_record_target.cat1.erb → r2/_record_target.cat1.erb} +3 -0
- data/templates/cat1/r2/_reporting_parameters.cat1.erb +31 -0
- data/templates/cat1/{_result_value.cat1.erb → r2/_result_value.cat1.erb} +1 -1
- data/templates/cat1/{_telecom.cat1.erb → r2/_telecom.cat1.erb} +0 -0
- data/templates/cat1/{show.cat1.erb → r2/show.cat1.erb} +52 -5
- data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.1.cat1.erb +14 -0
- data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.103.cat1.erb +17 -0
- data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.105.cat1.erb +68 -0
- data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.11.cat1.erb +58 -0
- data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.12.cat1.erb → r3/_2.16.840.1.113883.10.20.24.3.12.cat1.erb} +4 -5
- data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.13.cat1.erb +39 -0
- data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.14.cat1.erb +39 -0
- data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.17.cat1.erb +23 -0
- data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.18.cat1.erb +25 -0
- data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.2.cat1.erb +29 -0
- data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.22.cat1.erb → r3/_2.16.840.1.113883.10.20.24.3.22.cat1.erb} +6 -5
- data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.23.cat1.erb → r3/_2.16.840.1.113883.10.20.24.3.23.cat1.erb} +26 -30
- data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.26.cat1.erb +20 -0
- data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.3.cat1.erb +25 -0
- data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.31.cat1.erb +23 -0
- data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.32.cat1.erb → r3/_2.16.840.1.113883.10.20.24.3.32.cat1.erb} +4 -4
- data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.37.cat1.erb +22 -0
- data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.38.cat1.erb → r3/_2.16.840.1.113883.10.20.24.3.38.cat1.erb} +3 -3
- data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.4.cat1.erb +29 -0
- data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.41.cat1.erb → r3/_2.16.840.1.113883.10.20.24.3.41.cat1.erb} +8 -10
- data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.42.cat1.erb +38 -0
- data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.43.cat1.erb +24 -0
- data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.44.cat1.erb +25 -0
- data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.45.cat1.erb → r3/_2.16.840.1.113883.10.20.24.3.45.cat1.erb} +5 -5
- data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.46.cat1.erb +30 -0
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- data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.54.cat1.erb → r3/_2.16.840.1.113883.10.20.24.3.54.cat1.erb} +4 -4
- data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.55.cat1.erb +18 -0
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- data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.63.cat1.erb → r3/_2.16.840.1.113883.10.20.24.3.63.cat1.erb} +6 -8
- data/templates/cat1/r3/_2.16.840.1.113883.10.20.24.3.64.cat1.erb +51 -0
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- data/templates/cat1/r3/_address.cat1.erb +9 -0
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- data/templates/{cat3/_id.cat3.erb → cat1/r3/_id.cat1.erb} +0 -0
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- data/templates/cat1/r3_1/_2.16.840.1.113883.10.20.24.3.1.cat1.erb +14 -0
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- data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.18.cat1.erb → r3_1/_2.16.840.1.113883.10.20.24.3.18.cat1.erb} +3 -3
- data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.2.cat1.erb → r3_1/_2.16.840.1.113883.10.20.24.3.2.cat1.erb} +2 -2
- data/templates/cat1/r3_1/_2.16.840.1.113883.10.20.24.3.22.cat1.erb +30 -0
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- data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.26.cat1.erb → r3_1/_2.16.840.1.113883.10.20.24.3.26.cat1.erb} +4 -2
- data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.3.cat1.erb → r3_1/_2.16.840.1.113883.10.20.24.3.3.cat1.erb} +2 -2
- data/templates/cat1/r3_1/_2.16.840.1.113883.10.20.24.3.31.cat1.erb +24 -0
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- data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.4.cat1.erb → r3_1/_2.16.840.1.113883.10.20.24.3.4.cat1.erb} +2 -2
- data/templates/cat1/r3_1/_2.16.840.1.113883.10.20.24.3.41.cat1.erb +45 -0
- data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.42.cat1.erb → r3_1/_2.16.840.1.113883.10.20.24.3.42.cat1.erb} +4 -4
- data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.43.cat1.erb → r3_1/_2.16.840.1.113883.10.20.24.3.43.cat1.erb} +3 -3
- data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.44.cat1.erb → r3_1/_2.16.840.1.113883.10.20.24.3.44.cat1.erb} +3 -3
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- data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.46.cat1.erb → r3_1/_2.16.840.1.113883.10.20.24.3.46.cat1.erb} +4 -4
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- data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.57.cat1.erb → r3_1/_2.16.840.1.113883.10.20.24.3.57.cat1.erb} +3 -3
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- data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.62.cat1.erb → r3_1/_2.16.840.1.113883.10.20.24.3.62.cat1.erb} +5 -5
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- data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.64.cat1.erb → r3_1/_2.16.840.1.113883.10.20.24.3.64.cat1.erb} +7 -7
- data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.69.cat1.erb → r3_1/_2.16.840.1.113883.10.20.24.3.69.cat1.erb} +2 -2
- data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.7.cat1.erb → r3_1/_2.16.840.1.113883.10.20.24.3.7.cat1.erb} +12 -9
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- data/templates/cat1/{_2.16.840.1.113883.10.20.24.3.59.cat1.erb → r4/_2.16.840.1.113883.10.20.24.3.144.cat1.erb} +6 -6
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- data/templates/cat1/_2.16.840.1.113883.10.20.24.3.37.cat1.erb +0 -20
- data/templates/cat1/_2.16.840.1.113883.10.20.24.3.47.cat1.erb +0 -27
- data/templates/cat1/_2.16.840.1.113883.10.20.24.3.51.cat1.erb +0 -13
- data/templates/cat1/_reason.cat1.erb +0 -23
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<documentationOf typeCode="DOC">
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<serviceEvent classCode="PCPR"> <!-- care provision -->
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<% if providers.empty? -%>
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<!-- No provider data found in the patient record
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putting in a fake provider -->
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<effectiveTime>
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<low value="20020716"/>
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<high value="<%= Time.now.utc.to_formatted_s(:number) %>"/>
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</effectiveTime>
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<!-- You can include multiple performers, each with an NPI, TIN, CCN. -->
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<performer typeCode="PRF">
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<time>
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<low value="20020716"/>
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<high value="<%= Time.now.utc.to_formatted_s(:number) %>"/>
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</time>
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<assignedEntity>
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<!-- This is the provider NPI -->
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<id root="2.16.840.1.113883.4.6" extension="111111111" />
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<representedOrganization>
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<!-- This is the organization TIN -->
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<id root="2.16.840.1.113883.4.2" extension="1234567" />
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<!-- This is the organization CCN -->
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<id root="2.16.840.1.113883.4.336" extension="54321" />
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</representedOrganization>
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</assignedEntity>
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</performer>
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<% else -%>
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<% providers.each do |prov| -%>
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<effectiveTime>
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<low value= "<%= start_date.utc.to_formatted_s(:number) %>" />
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<high value= "<%= end_date.utc.to_formatted_s(:number) %>" />
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</effectiveTime>
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<!-- You can include multiple performers, each with an NPI, TIN, CCN. -->
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<performer typeCode="PRF">
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<time>
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<low value="<%= start_date.utc.to_formatted_s(:number) %>" />
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<high value="<%= end_date.utc.to_formatted_s(:number) %>" />
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</time>
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<assignedEntity>
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<% prov.cda_identifiers.each do |cda_id| -%>
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<% unless cda_id.root.eql? '2.16.840.1.113883.4.2' -%>
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<id root="<%= cda_id.root %>" extension="<%= cda_id.extension %>" />
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<% end -%>
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<% end -%>
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<representedOrganization>
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<% prov.cda_identifiers.each do |cda_id| -%>
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<% if cda_id.root.eql?('2.16.840.1.113883.4.2') -%>
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<id root="2.16.840.1.113883.4.2" extension="<%= cda_id.extension %>" />
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<% end -%>
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<% end -%>
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</representedOrganization>
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</assignedEntity>
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</performer>
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<% end -%>
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<% end -%>
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</serviceEvent>
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</documentationOf>
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<component>
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<section>
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<!-- This is the templateId for Reporting Parameters section -->
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<templateId root="2.16.840.1.113883.10.20.17.2.1"/>
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<!-- This is the templateId for the QRDA III Reporting Parameters Section -->
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<templateId root="2.16.840.1.113883.10.20.27.2.2"/>
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<code code="55187-9" codeSystem="2.16.840.1.113883.6.1"/>
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<title>Reporting Parameters</title>
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<text>
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<list>
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<item>Reporting period: <%= start_date.to_formatted_s(:long_ordinal) %> - <%= end_date.to_formatted_s(:long_ordinal) %></item>
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</list>
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</text>
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<entry typeCode="DRIV">
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<%== render :partial => 'reporting_parameters_act', :locals => {:start_date => start_date, :end_date => end_date} %>
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</entry>
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</section>
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</component>
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<act classCode="ACT" moodCode="EVN">
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<!-- This is the templateId for Reporting Parameters Act -->
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<templateId root="2.16.840.1.113883.10.20.17.3.8"/>
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<id extension="<%= identifier_for([start_date, end_date]) %>" />
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<code code="252116004" codeSystem="2.16.840.1.113883.6.96" displayName="Observation Parameters"/>
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<effectiveTime>
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<low value="<%= start_date.to_formatted_s(:number) %>"/>
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<high value="<%= end_date.to_formatted_s(:number) %>"/>
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</effectiveTime>
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</act>
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<!-- Supplemental Data Template -->
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<entryRelationship typeCode="COMP">
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<observation classCode="OBS" moodCode="EVN">
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<!-- <%= template_name %> -->
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<% template_ids.each do |tid| %>
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<templateId root="<%= tid %>" extension="<%= extension %>"/>
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<% end %>
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<id nullFlavor="NA" />
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<code code="<%= supplemental_data_code %>"
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codeSystem="<%= supplemental_data_code_system %>"/>
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<statusCode code="completed"/>
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<% if supplemental_data_value_code == "" || supplemental_data_value_code == "UNK" -%>
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<value xsi:type="CD"
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nullFlavor="UNK" />
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<% else -%>
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<value xsi:type="CD"
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code="<%= supplemental_data_value_code %>"
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codeSystem="<%= supplemental_data_value_code_system %>"/>
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<% end %>
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<entryRelationship typeCode="SUBJ" inversionInd="true">
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<!-- Aggregate Count template -->
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<observation classCode="OBS" moodCode="EVN">
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<templateId root="2.16.840.1.113883.10.20.27.3.3"/>
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<code code="MSRAGG"
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displayName="rate aggregation"
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codeSystem="2.16.840.1.113883.5.4"
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codeSystemName="ActCode"/>
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<value xsi:type="INT" value="<%= count.round %>"/>
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<methodCode code="COUNT"
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displayName="Count"
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codeSystem="2.16.840.1.113883.5.84"
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codeSystemName="ObservationMethod"/>
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</observation>
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</entryRelationship>
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</observation>
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</entryRelationship>
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<telecom use="<%=telecom.use%>" value="tel:+<%=telecom.value%>" />
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<?xml version="1.0" encoding="utf-8"?>
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<ClinicalDocument xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
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xmlns="urn:hl7-org:v3"
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xmlns:cda="urn:hl7-org:v3">
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<!--
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********************************************************
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CDA Header
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********************************************************
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-->
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<realmCode code="US"/>
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<typeId root="2.16.840.1.113883.1.3" extension="POCD_HD000040"/>
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<!-- QRDA Category III template ID (this template ID differs from QRDA III comment only template ID). -->
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<templateId root="2.16.840.1.113883.10.20.27.1.1" extension="2017-06-01"/>
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<%== render :partial=>"id", :locals=>{identifier: header.identifier} %>
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<!-- SHALL QRDA III document type code -->
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<code code="55184-6" codeSystem="2.16.840.1.113883.6.1" codeSystemName="LOINC"
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displayName="Quality Reporting Document Architecture Calculated Summary Report"/>
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<!-- SHALL Title, SHOULD have this content -->
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<title>QRDA Calculated Summary Report</title>
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<!-- SHALL -->
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<effectiveTime value="<%= Time.now.utc.to_formatted_s(:number) %>"/>
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<confidentialityCode codeSystem="2.16.840.1.113883.5.25" code="N"/>
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<languageCode code="en"/>
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<!-- SHOULD The version of the file being submitted. -->
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<versionNumber value="1"/>
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<!-- SHALL contain recordTarget and ID - but ID is nulled to NA. This is an aggregate summary report. Therefore CDA's required patient identifier is nulled. -->
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<recordTarget>
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<patientRole>
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<id nullFlavor="NA"/>
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</patientRole>
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</recordTarget>
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<%== render :partial=>"author", :collection=>header.authors %>
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<!-- SHALL have 1..* author. MAY be device or person.
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The author of the CDA document in this example is a device at a data submission vendor/registry. -->
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<!-- The custodian of the CDA document is the same as the legal authenticator in this
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example and represents the reporting organization. -->
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<!-- SHALL -->
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<custodian>
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<assignedCustodian>
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<%== render :partial=>"organization", :locals=>{organization: header.custodian.organization, tag_name: "representedCustodianOrganization"} %>
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</assignedCustodian>
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</custodian>
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<!-- The legal authenticator of the CDA document is a single person who is at the
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same organization as the custodian in this example. This element must be present. -->
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<!-- SHALL -->
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<legalAuthenticator>
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<!-- SHALL -->
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<time value="<%= header.legal_authenticator.time.utc.to_formatted_s(:number) %>"/>
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<!-- SHALL -->
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<signatureCode code="S"/>
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<assignedEntity>
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<!-- SHALL ID -->
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<%== render :partial=>"id", :collection=>header.legal_authenticator.ids, :id=>"identifier" %>
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<%== render :partial=>"address" , :collection=>header.legal_authenticator.addresses %>
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<assignedPerson>
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<name>
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<given><%= header.legal_authenticator.person.given %></given>
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<family><%= header.legal_authenticator.person.family %></family>
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</name>
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</assignedPerson>
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<%== render :partial=>"organization", :locals=>{organization: header.legal_authenticator.organization, tag_name: "representedOrganization"} %>
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</assignedEntity>
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</legalAuthenticator>
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<%== render :partial=>"providers", :locals=>{providers: header.performers, start_date: start_date, end_date: end_date} %>
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<!--
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********************************************************
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CDA Body
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********************************************************
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-->
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<component>
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<structuredBody>
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<!--
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********************************************************
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QRDA Category III Reporting Parameters
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********************************************************
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-->
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<%== render :partial => 'reporting_parameters', :locals => {:start_date => start_date, :end_date => end_date} %>
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<!--
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********************************************************
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Measure Section
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********************************************************
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-->
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<component>
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<section>
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<!-- Implied template Measure Section templateId -->
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<templateId root="2.16.840.1.113883.10.20.24.2.2"/>
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<!-- In this case the query is using an eMeasure -->
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<!-- QRDA Category III Measure Section template -->
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<templateId root="2.16.840.1.113883.10.20.27.2.1" extension="2017-06-01"/>
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<code code="55186-1" codeSystem="2.16.840.1.113883.6.1"/>
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<title>Measure Section</title>
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<text>
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</text>
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<% measures.each do |measure| %>
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<entry>
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<organizer classCode="CLUSTER" moodCode="EVN">
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<!-- Implied template Measure Reference templateId -->
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<templateId root="2.16.840.1.113883.10.20.24.3.98"/>
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<!-- SHALL 1..* (one for each referenced measure) Measure Reference and Results template -->
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<templateId root="2.16.840.1.113883.10.20.27.3.1" extension="2016-09-01"/>
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<id extension="<%= measure['id'] || UUID.generate %>"/>
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<statusCode code="completed"/>
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<reference typeCode="REFR">
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<externalDocument classCode="DOC" moodCode="EVN">
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<!-- SHALL: required Id but not restricted to the eMeasure Document/Id-->
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<!-- QualityMeasureDocument/id This is the version specific identifier for eMeasure -->
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<id root="2.16.840.1.113883.4.738" extension="<%= measure['hqmf_id'] %>"/>
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<!-- SHOULD This is the title of the eMeasure -->
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<text><%= measure['name'] %></text>
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<!-- SHOULD: setId is the eMeasure version neutral id -->
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<setId root="<%= measure['hqmf_set_id'] %>"/>
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<!-- This is the sequential eMeasure Version number -->
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<versionNumber value="1"/>
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</externalDocument>
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</reference>
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<% result = results[measure['hqmf_id']]
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unless result.is_cv?
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result.population_groups.each do |pg|
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-%>
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<component>
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<%== render :partial => 'performance_rate', :locals => {:population_group => pg, :qrda3_version => qrda3_version} %>
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</component>
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<% end
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end -%>
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<% result.populations.each do |pop|
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unless pop.type == 'OBSERV' -%>
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<component>
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<%== render :partial => 'measure_data', :locals => {:aggregate_count => result, :population => pop, :qrda3_version => qrda3_version} %>
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</component>
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<% end
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end -%>
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</organizer>
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</entry>
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<% end %>
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<entry>
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<%== render :partial => 'reporting_parameters_act', :locals => {:start_date => start_date, :end_date => end_date} %>
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</entry>
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</section>
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</component>
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</structuredBody>
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</component>
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</ClinicalDocument>
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@@ -15,8 +15,8 @@
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<%== code_display(entry, {:preferred_code_sets => ['SNOMED-CT']}) %>
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<statusCode code="completed"/>
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<effectiveTime <%= value_or_null_flavor(entry.as_point_in_time) %>/>
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-
</observation>
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+
</observation>
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</entry>
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<% end -%>
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</section>
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-
</component>
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</component>
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@@ -20,7 +20,7 @@
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<templateId root="2.16.840.1.113883.10.20.22.4.27"/>
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<!-- Result observation template -->
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<id root="<%= UUID.generate %>"/>
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-
<%== code_display(entry, {'preferred_code_sets' => ['LOINC','SNOMED']}) %>
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+
<%== code_display(entry, {'preferred_code_sets' => ['LOINC','SNOMED-CT']}) %>
|
24
24
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<text>
|
25
25
|
<reference value="vitals-desc-<%= i %>"/>
|
26
26
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</text>
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@@ -4,7 +4,7 @@
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4
4
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udcs = nil
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5
5
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udcs_entries = nil
|
6
6
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if measures.length > 0
|
7
|
-
udcs = unique_data_criteria(measures)
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7
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+
udcs = unique_data_criteria(measures, false)
|
8
8
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udcs_entries = udcs.collect{|dc| entries_for_data_criteria(dc['data_criteria'],patient)}
|
9
9
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udcs_entries.flatten!
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10
10
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udcs_entries.uniq!
|
metadata
CHANGED
@@ -1,203 +1,214 @@
|
|
1
1
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--- !ruby/object:Gem::Specification
|
2
2
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name: health-data-standards
|
3
3
|
version: !ruby/object:Gem::Version
|
4
|
-
version: 3.
|
4
|
+
version: 3.7.0
|
5
5
|
platform: ruby
|
6
6
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authors:
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7
|
-
-
|
8
|
-
|
9
|
-
- Marc Hadley
|
10
|
-
- Rob Dingwell
|
11
|
-
- Andre Quina
|
12
|
-
autorequire:
|
7
|
+
- The MITRE Corporation
|
8
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autorequire:
|
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bindir: bin
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|
cert_chain: []
|
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date:
|
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date: 2017-11-08 00:00:00.000000000 Z
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dependencies:
|
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name: rest-client
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requirement: !ruby/object:Gem::Requirement
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version: 1.8.0
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type: :runtime
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|
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|
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description: A library for generating and consuming various healthcare related formats.
|
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|
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|
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|
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description: A library for generating and consuming various healthcare related formats.
|
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|
+
These include HITSP C32, QRDA Category I, and QRDA Category III.
|
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email: tacoma-list@lists.mitre.org
|
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|
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|
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|
@@ -212,6 +223,7 @@ files:
|
|
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|
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|
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|
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|
@@ -232,26 +244,36 @@ files:
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- lib/health-data-standards/import/cat1/clinical_trial_participant_importer.rb
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- lib/health-data-standards/import/cat1/device_order_importer.rb
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- lib/health-data-standards/import/cat1/gestational_age_importer.rb
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- lib/health-data-standards/import/cat1/immunization_administered_importer.rb
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- lib/health-data-standards/import/cat1/procedure_importer.rb
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- lib/health-data-standards/import/cat1/transfer_from_act_importer.rb
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|
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|
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|
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|
@@ -265,6 +287,7 @@ files:
|
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|
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|
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|
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|
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|
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|
@@ -282,8 +305,12 @@ files:
|
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|
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|
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|
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|
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|
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|
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|
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- lib/health-data-standards/models/assessment.rb
|
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|
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|
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|
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|
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|
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|
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|
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|
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|
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|
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|
- lib/health-data-standards/models/cqm/aggregate_objects.rb
|
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|
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|
@@ -292,8 +319,10 @@ files:
|
|
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|
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|
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|
- lib/health-data-standards/models/cqm/query_cache.rb
|
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|
- lib/health-data-standards/models/encounter.rb
|
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|
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- lib/health-data-standards/models/encounter_principal_diagnosis.rb
|
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|
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|
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|
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|
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|
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- lib/health-data-standards/models/family_history.rb
|
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|
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|
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|
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|
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|
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@@ -582,26 +854,26 @@ files:
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homepage: https://github.com/projectcypress/health-data-standards
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licenses:
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-
-
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+
- Apache-2.0
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metadata: {}
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post_install_message:
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post_install_message:
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rdoc_options: []
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require_paths:
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- lib
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required_ruby_version: !ruby/object:Gem::Requirement
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requirements:
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- -
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- - ">="
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version: '0'
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required_rubygems_version: !ruby/object:Gem::Requirement
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requirements:
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version: '0'
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requirements: []
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rubyforge_project:
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rubygems_version: 2.
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signing_key:
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rubyforge_project:
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rubygems_version: 2.5.2.1
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signing_key:
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specification_version: 4
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summary: A library for generating and consuming various healthcare related formats.
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test_files: []
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