graffiti 2.1

data/ChangeLog.mtn

@@ -0,0 +1,233 @@
+-----------------------------------------------------------------
+Revision: 5f07d75e7786d56d30659b04ac0091fc8bc37fda
+Ancestor: e13812ed0f84c7e722284750df4ac1a8ef81a501
+Author: angdraug@debian.org
+Date: 2009-10-11T12:23:07
+Branch: graffiti-head
+
+Deleted entries:
+        doc/diagrams/graffiti_classes.dia
+Added files:
+        doc/diagrams/graffiti-classes.svg
+        doc/diagrams/graffiti-deployment.svg
+        doc/diagrams/graffiti-store-sequence.svg
+        doc/diagrams/squish-select-sequence.svg
+
+ChangeLog: 
+
+replaced the old Dia diagram with SVG diagrams produced with BoUML
+
+-----------------------------------------------------------------
+Revision: e13812ed0f84c7e722284750df4ac1a8ef81a501
+Ancestor: e364f136ecc00b4559a0f0d07f257886f48ae4ef
+Author: angdraug@debian.org
+Date: 2009-09-06T13:47:40
+Branch: graffiti-head
+
+Modified files:
+        README.rdoc
+
+ChangeLog: 
+
+relational data adaptation instructions added
+
+-----------------------------------------------------------------
+Revision: e364f136ecc00b4559a0f0d07f257886f48ae4ef
+Ancestor: f2ef2d91fb1e29ee91928b5ebf52c22b09def60b
+Author: angdraug@debian.org
+Date: 2009-09-06T13:22:12
+Branch: graffiti-head
+
+Modified files:
+        README.rdoc
+
+ChangeLog: 
+
+update language description added
+
+-----------------------------------------------------------------
+Revision: f2ef2d91fb1e29ee91928b5ebf52c22b09def60b
+Ancestor: c5c5ad50f2f0e1159628804eb141c60977483fb7
+Author: angdraug@debian.org
+Date: 2009-09-06T13:12:45
+Branch: graffiti-head
+
+Modified files:
+        README.rdoc
+
+ChangeLog: 
+
+query language description added
+
+-----------------------------------------------------------------
+Revision: c5c5ad50f2f0e1159628804eb141c60977483fb7
+Ancestor: c6389322361c36538d626257f8dd957864e7b85e
+Author: angdraug@debian.org
+Date: 2009-08-22T12:38:32
+Branch: graffiti-head
+
+Modified files:
+        TODO lib/graffiti/rdf_config.rb
+        lib/graffiti/rdf_property_map.rb lib/graffiti/sql_mapper.rb
+
+ChangeLog: 
+
+move setting of subproperty_of and transitive_closure outside of the RdfPropertyMap constructor; documented some missing pieces
+
+-----------------------------------------------------------------
+Revision: c6389322361c36538d626257f8dd957864e7b85e
+Ancestor: 41a4f5d475227a9df9aae268506bcdb2dbf2e6ab
+Author: angdraug@debian.org
+Date: 2009-08-22T12:37:03
+Branch: graffiti-head
+
+Modified files:
+        lib/graffiti/squish.rb
+
+ChangeLog: 
+
+use @db, db shortcut is no longer available
+
+-----------------------------------------------------------------
+Revision: 41a4f5d475227a9df9aae268506bcdb2dbf2e6ab
+Ancestor: bed7201b8512540b0c225add168a66b18cfad5f3
+Author: angdraug@debian.org
+Date: 2009-08-05T13:16:50
+Branch: graffiti-head
+
+Modified files:
+        lib/graffiti/squish.rb
+
+ChangeLog: 
+
+allow PostgreSQL full text search operators in expressions
+
+-----------------------------------------------------------------
+Revision: bed7201b8512540b0c225add168a66b18cfad5f3
+Ancestor: 3538ff90e492811cd2c022cf6502439090241d8e
+Author: angdraug@debian.org
+Date: 2009-08-02T14:34:09
+Branch: graffiti-head
+
+Modified files:
+        lib/graffiti/sql_mapper.rb
+
+ChangeLog: 
+
+move SqlNodeBinding and SqlExpression out of SqlMapper namespace; move exception raising into check_graph
+
+-----------------------------------------------------------------
+Revision: 3538ff90e492811cd2c022cf6502439090241d8e
+Ancestor: ad944a53e855766391fb1840b09cc47eac78f911
+Author: angdraug@debian.org
+Date: 2009-07-30T08:50:54
+Branch: graffiti-head
+
+Added files:
+        lib/graffiti/exceptions.rb lib/graffiti/rdf_config.rb
+        lib/graffiti/rdf_property_map.rb lib/graffiti/sql_mapper.rb
+        lib/graffiti/squish.rb lib/graffiti/store.rb
+Added directories:
+        lib/graffiti
+Modified files:
+        lib/graffiti.rb
+
+ChangeLog: 
+
+split Graffiti classes into their own .rb files
+
+-----------------------------------------------------------------
+Revision: ad944a53e855766391fb1840b09cc47eac78f911
+Ancestor: 35e3b7019eda146e755449c86f2b04f035796608
+Author: angdraug@debian.org
+Date: 2009-07-28T12:42:47
+Branch: graffiti-head
+
+Modified files:
+        README.rdoc
+
+ChangeLog: 
+
+mention SynCache in README.rdoc
+
+-----------------------------------------------------------------
+Revision: 35e3b7019eda146e755449c86f2b04f035796608
+Ancestor: 7eeecf40a8f1e0127ecc6d2f818bd6d80e0b1f90
+Author: angdraug@debian.org
+Date: 2009-07-28T10:56:06
+Branch: graffiti-head
+
+Modified files:
+        README.rdoc lib/graffiti.rb test/ts_graffiti.rb
+
+ChangeLog: 
+
+module initialization fixes
+
+-----------------------------------------------------------------
+Revision: 7eeecf40a8f1e0127ecc6d2f818bd6d80e0b1f90
+Ancestor: 35efa8b3fb65bbe7744fc930dc3ceb5a98564a98
+Author: angdraug@debian.org
+Date: 2009-07-28T10:45:31
+Branch: graffiti-head
+
+Modified files:
+        README.rdoc
+
+ChangeLog: 
+
+minor documentation cleanup
+
+-----------------------------------------------------------------
+Revision: 35efa8b3fb65bbe7744fc930dc3ceb5a98564a98
+Ancestor: 60fc13b5ffccadc9990d5303de93e71be30128bb
+Author: angdraug@debian.org
+Date: 2009-07-28T10:38:48
+Branch: graffiti-head
+
+Added files:
+        doc/diagrams/graffiti_classes.dia
+Added directories:
+        doc/diagrams
+Modified files:
+        README.rdoc
+
+ChangeLog: 
+
+documentation update
+
+-----------------------------------------------------------------
+Revision: 60fc13b5ffccadc9990d5303de93e71be30128bb
+Ancestor: abd14a047ad68bc4e92ca80916e71a39f605b14c
+Author: angdraug@debian.org
+Date: 2009-07-27T19:20:47
+Branch: graffiti-head
+
+Renamed entries:
+        doc/examples/samizdat-triggers-pgsql-sql to doc/examples/samizdat-triggers-pgsql.sql
+
+ChangeLog: 
+
+fixed .sql extension for triggers example
+
+-----------------------------------------------------------------
+Revision: abd14a047ad68bc4e92ca80916e71a39f605b14c
+Ancestor: 
+Author: angdraug@debian.org
+Date: 2009-07-27T19:16:55
+Branch: graffiti-head
+
+Added files:
+        COPYING README.rdoc TODO
+        doc/examples/samizdat-rdf-config.yaml
+        doc/examples/samizdat-triggers-pgsql-sql
+        doc/papers/collreif.tex doc/papers/rel-rdf.tex
+        doc/rdf-impl-report.txt lib/graffiti.rb setup.rb
+        test/ts_graffiti.rb
+Added directories:
+        . doc doc/examples doc/papers lib test
+
+ChangeLog: 
+
+initial checkin: Graffiti is a spin-off of storage.rb from Samizdat project
+

data/README.rdoc

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+= Graffiti - relational RDF store for Ruby
+
+== Synopsis
+
+  require 'sequel'
+  require 'yaml'
+  require 'graffiti'
+
+  db = Sequel.connect(:adapter => 'pg', :database = > dbname)
+  config = File.open('rdf.yaml') {|f| YAML.load(f.read) }
+  store = Graffiti::Store.new(db, config)
+
+  data = store.fetch(%{
+    SELECT ?date, ?title
+    WHERE (dc::date ?r ?date FILTER ?date >= :start)
+          (dc::title ?r ?title)
+    ORDER BY ?date DESC}, 10, 0, :start => Time.now - 24*3600)
+
+  puts data.first[:title]
+
+
+== Description
+
+Graffiti is an RDF store based on dynamic translation of RDF queries
+into SQL. Graffiti allows to map any relational database schema into RDF
+semantics and vice versa, to store any RDF data in a relational
+database.
+
+
+== Requirements
+
+Graffiti uses Sequel to connect to database backend and provides a
+DBI-like interface to run RDF queries in Squish query language from Ruby
+applications. SynCache object cache is used for in-process cache of
+translated Squish queries.
+
+
+== Query Language
+
+Graffiti implements Squish RDF query language with several extensions. A
+query may include following clauses:
+
+* SELECT: comma-separated list of result expressions, which may be
+  variables or aggregate functions.
+
+* WHERE: main graph pattern, described as a list of triple patterns.
+  Each triple is enclosed in parenthesis and includes predicate, subject
+  and object. Predicate must be a URL and may use a shorthand notation
+  with namespace id separated by double colon. Subject may be a URL,
+  internal resource id, or variable. Object may be a URL, internal
+  resource id, variable, or literal. Values of variables bound by the
+  triple pattern may be bound by an optional FILTER expression.
+
+* EXCEPT: negative graph pattern. Solutions that match any part of the
+  negative graph pattern are excluded from the result set.
+
+* OPTIONAL: optional graph pattern. Variables defined in the optional
+  pattern are only included in the result set only for solutions that
+  match corresponding parts of the optional graph pattern.
+
+* LITERAL: global filter expression. Used for expressions that involve
+  variables from different triple patterns.
+
+* GROUP BY: result set aggregation criteria.
+
+* ORDER BY: result set ordering criteria.
+
+* USING: namespaces definitions. Namespaces defined in the RDF store
+  configuration do not have to be repeated here.
+
+A basic update language is also implemented. A Squish assert statement
+uses the same structure as a query, with SELECT clause replaced by
+either one or both of the following clauses:
+
+* INSERT: list of variables representing new resources to be inserted
+  into the RDF graph.
+
+* UPDATE: list of assignments of literal expressions to variables bound
+  by a solution.
+
+Assert statement will only update one solution per invocation, if more
+solutions match the graph pattern, only the first will be updated.
+
+
+== Relational Data
+
+Relational data has to be adapted for RDF access using Graffiti. The
+adaptation is non-intrusive and will not break compatibility with
+existing SQL queries.
+
+Following schema changes are required for all cases:
+
+* Create rdfs:Resource superclass table with auto-generated primary key.
+
+* Replace primary keys of mapped subclass tables with foreign keys
+  referencing the rdfs:Resource table (existing foreign keys may need to
+  be updated to reflect this change.
+
+* Register rdfs:subClassOf inference database triggers to update the
+  rdfs:Re-source table and maintain foreign keys integrity on all
+  changes in mapped subclass tables.
+
+Following changes may be necessary to support optional RDF mapping
+features:
+
+* Register database triggers for other cases of rdfs:subClassOf
+  entailment.
+
+* Create triples table (required to represent non-relational RDF data
+  and RDF statement reification).
+
+* Add sub-property qualifier attributes referencing property URIref
+  entry in the rdfs:Resource table for each attribute mapped to a
+  super-property.
+
+* Create transitive closure tables, register owl:TransitiveProperty
+  inference triggers.
+
+Example of RDF map and corresponding triggers can be found in
+doc/examples/.
+
+
+== Copying
+
+  Copyright (c) 2002-2011  Dmitry Borodaenko <angdraug@debian.org>
+
+  This program is free software.
+  You can distribute/modify this program under the terms of the GNU
+  General Public License version 3 or later.

data/TODO

@@ -0,0 +1,30 @@
+Graffiti ToDo List
+==================
+
+- generalize RDF storage, implement SPARQL
+- unit, functional, and performance test suite (in progress)
+- separate library for RDF storage (done)
+- investigate alternative backends: FramerD, 3store, Redland
+  -- depends on separate library for RDF storage
+  -- depends on test suite
+- security: Squish literal condition safety (done), limited number of
+  query clauses (done), dry-run of user-defined query, approvable
+  resource usage
+- query result set representation
+- optional patterns and negation (done)
+- parametrized queries (done)
+  -- cache prepared statements
+- support blob literals
+  -- depends on parametrized queries
+- vocabulary entailment: RDF, RDFS, OWL
+- RDF aggregates storage internalization (Seq, Bag, Alt)
+- query introspection
+- storage workflow control (triggers)
+- transparent (structured) RDF query storage
+  -- depends on RDF aggregates storage
+  -- depends on storage workflow control
+- subqueries (query premise)
+  -- depends on transparent query storage
+- chain queries
+  -- depends on native RDF storage
+

data/doc/diagrams/graffiti-classes.svg

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