google-api-client 0.28.4 → 0.28.5
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- checksums.yaml +5 -5
- data/.kokoro/build.sh +3 -5
- data/.kokoro/continuous/linux.cfg +1 -1
- data/.kokoro/presubmit/linux.cfg +1 -1
- data/CHANGELOG.md +147 -0
- data/generated/google/apis/accesscontextmanager_v1.rb +34 -0
- data/generated/google/apis/accesscontextmanager_v1/classes.rb +755 -0
- data/generated/google/apis/accesscontextmanager_v1/representations.rb +282 -0
- data/generated/google/apis/accesscontextmanager_v1/service.rb +788 -0
- data/generated/google/apis/accesscontextmanager_v1beta.rb +1 -1
- data/generated/google/apis/accesscontextmanager_v1beta/classes.rb +46 -30
- data/generated/google/apis/accesscontextmanager_v1beta/representations.rb +4 -0
- data/generated/google/apis/adexchangebuyer2_v2beta1.rb +1 -1
- data/generated/google/apis/adexchangebuyer2_v2beta1/classes.rb +2 -2
- data/generated/google/apis/admin_directory_v1.rb +1 -1
- data/generated/google/apis/admin_directory_v1/classes.rb +5 -50
- data/generated/google/apis/admin_directory_v1/representations.rb +0 -2
- data/generated/google/apis/alertcenter_v1beta1.rb +1 -1
- data/generated/google/apis/alertcenter_v1beta1/classes.rb +3 -2
- data/generated/google/apis/alertcenter_v1beta1/service.rb +7 -7
- data/generated/google/apis/analyticsreporting_v4.rb +1 -1
- data/generated/google/apis/analyticsreporting_v4/classes.rb +638 -0
- data/generated/google/apis/analyticsreporting_v4/representations.rb +248 -0
- data/generated/google/apis/analyticsreporting_v4/service.rb +30 -0
- data/generated/google/apis/androiddeviceprovisioning_v1.rb +1 -1
- data/generated/google/apis/androiddeviceprovisioning_v1/classes.rb +10 -10
- data/generated/google/apis/androidenterprise_v1.rb +1 -1
- data/generated/google/apis/androidenterprise_v1/classes.rb +8 -0
- data/generated/google/apis/androidenterprise_v1/representations.rb +2 -0
- data/generated/google/apis/androidmanagement_v1.rb +1 -1
- data/generated/google/apis/androidmanagement_v1/classes.rb +59 -2
- data/generated/google/apis/androidmanagement_v1/representations.rb +33 -0
- data/generated/google/apis/appengine_v1.rb +1 -1
- data/generated/google/apis/appengine_v1/classes.rb +43 -98
- data/generated/google/apis/appengine_v1/representations.rb +17 -35
- data/generated/google/apis/appengine_v1alpha.rb +1 -1
- data/generated/google/apis/appengine_v1alpha/classes.rb +0 -97
- data/generated/google/apis/appengine_v1alpha/representations.rb +0 -35
- data/generated/google/apis/appengine_v1beta.rb +1 -1
- data/generated/google/apis/appengine_v1beta/classes.rb +3 -99
- data/generated/google/apis/appengine_v1beta/representations.rb +0 -35
- data/generated/google/apis/bigquery_v2.rb +1 -1
- data/generated/google/apis/bigquery_v2/classes.rb +244 -173
- data/generated/google/apis/bigquery_v2/representations.rb +79 -58
- data/generated/google/apis/bigquerydatatransfer_v1.rb +3 -3
- data/generated/google/apis/bigquerydatatransfer_v1/classes.rb +10 -10
- data/generated/google/apis/bigquerydatatransfer_v1/service.rb +38 -6
- data/generated/google/apis/bigtableadmin_v2.rb +1 -1
- data/generated/google/apis/bigtableadmin_v2/classes.rb +4 -4
- data/generated/google/apis/binaryauthorization_v1beta1.rb +1 -1
- data/generated/google/apis/binaryauthorization_v1beta1/classes.rb +66 -6
- data/generated/google/apis/binaryauthorization_v1beta1/representations.rb +17 -0
- data/generated/google/apis/cloudasset_v1.rb +34 -0
- data/generated/google/apis/cloudasset_v1/classes.rb +805 -0
- data/generated/google/apis/cloudasset_v1/representations.rb +263 -0
- data/generated/google/apis/cloudasset_v1/service.rb +190 -0
- data/generated/google/apis/cloudasset_v1beta1.rb +1 -1
- data/generated/google/apis/cloudasset_v1beta1/classes.rb +20 -18
- data/generated/google/apis/cloudasset_v1beta1/service.rb +4 -4
- data/generated/google/apis/cloudbilling_v1.rb +1 -1
- data/generated/google/apis/cloudbilling_v1/classes.rb +1 -1
- data/generated/google/apis/cloudbuild_v1.rb +1 -1
- data/generated/google/apis/cloudbuild_v1/classes.rb +149 -10
- data/generated/google/apis/cloudbuild_v1/representations.rb +65 -0
- data/generated/google/apis/cloudbuild_v1alpha1.rb +1 -1
- data/generated/google/apis/cloudbuild_v1alpha1/classes.rb +6 -0
- data/generated/google/apis/cloudbuild_v1alpha1/representations.rb +2 -0
- data/generated/google/apis/cloudbuild_v1alpha1/service.rb +1 -1
- data/generated/google/apis/cloudfunctions_v1.rb +1 -1
- data/generated/google/apis/cloudfunctions_v1/classes.rb +11 -4
- data/generated/google/apis/cloudfunctions_v1/service.rb +8 -2
- data/generated/google/apis/cloudfunctions_v1beta2.rb +1 -1
- data/generated/google/apis/cloudfunctions_v1beta2/classes.rb +2 -1
- data/generated/google/apis/cloudfunctions_v1beta2/service.rb +6 -0
- data/generated/google/apis/cloudidentity_v1.rb +7 -1
- data/generated/google/apis/cloudidentity_v1/classes.rb +13 -13
- data/generated/google/apis/cloudidentity_v1/service.rb +6 -15
- data/generated/google/apis/cloudidentity_v1beta1.rb +7 -1
- data/generated/google/apis/cloudidentity_v1beta1/classes.rb +10 -10
- data/generated/google/apis/cloudidentity_v1beta1/service.rb +4 -10
- data/generated/google/apis/cloudiot_v1.rb +1 -1
- data/generated/google/apis/cloudiot_v1/classes.rb +11 -11
- data/generated/google/apis/cloudkms_v1.rb +1 -1
- data/generated/google/apis/cloudkms_v1/classes.rb +7 -3
- data/generated/google/apis/cloudprivatecatalog_v1beta1.rb +35 -0
- data/generated/google/apis/cloudprivatecatalog_v1beta1/classes.rb +358 -0
- data/generated/google/apis/cloudprivatecatalog_v1beta1/representations.rb +123 -0
- data/generated/google/apis/cloudprivatecatalog_v1beta1/service.rb +486 -0
- data/generated/google/apis/cloudprivatecatalogproducer_v1beta1.rb +35 -0
- data/generated/google/apis/cloudprivatecatalogproducer_v1beta1/classes.rb +1212 -0
- data/generated/google/apis/cloudprivatecatalogproducer_v1beta1/representations.rb +399 -0
- data/generated/google/apis/cloudprivatecatalogproducer_v1beta1/service.rb +1073 -0
- data/generated/google/apis/cloudresourcemanager_v1.rb +1 -1
- data/generated/google/apis/cloudresourcemanager_v1/classes.rb +17 -16
- data/generated/google/apis/cloudresourcemanager_v1beta1.rb +1 -1
- data/generated/google/apis/cloudresourcemanager_v1beta1/classes.rb +3 -3
- data/generated/google/apis/cloudresourcemanager_v2.rb +1 -1
- data/generated/google/apis/cloudresourcemanager_v2/classes.rb +14 -15
- data/generated/google/apis/cloudresourcemanager_v2/service.rb +1 -1
- data/generated/google/apis/cloudresourcemanager_v2beta1.rb +1 -1
- data/generated/google/apis/cloudresourcemanager_v2beta1/classes.rb +14 -15
- data/generated/google/apis/cloudresourcemanager_v2beta1/service.rb +1 -1
- data/generated/google/apis/cloudscheduler_v1beta1.rb +1 -1
- data/generated/google/apis/cloudscheduler_v1beta1/classes.rb +60 -44
- data/generated/google/apis/cloudscheduler_v1beta1/service.rb +5 -2
- data/generated/google/apis/cloudsearch_v1.rb +1 -1
- data/generated/google/apis/cloudsearch_v1/classes.rb +220 -48
- data/generated/google/apis/cloudsearch_v1/representations.rb +91 -0
- data/generated/google/apis/cloudsearch_v1/service.rb +15 -13
- data/generated/google/apis/cloudshell_v1.rb +1 -1
- data/generated/google/apis/cloudshell_v1/classes.rb +10 -10
- data/generated/google/apis/cloudshell_v1alpha1.rb +1 -1
- data/generated/google/apis/cloudshell_v1alpha1/classes.rb +17 -10
- data/generated/google/apis/cloudshell_v1alpha1/representations.rb +1 -0
- data/generated/google/apis/{partners_v2.rb → cloudtasks_v2.rb} +11 -9
- data/generated/google/apis/cloudtasks_v2/classes.rb +1432 -0
- data/generated/google/apis/cloudtasks_v2/representations.rb +408 -0
- data/generated/google/apis/cloudtasks_v2/service.rb +856 -0
- data/generated/google/apis/cloudtasks_v2beta2.rb +1 -1
- data/generated/google/apis/cloudtasks_v2beta2/classes.rb +119 -88
- data/generated/google/apis/cloudtasks_v2beta2/service.rb +3 -2
- data/generated/google/apis/cloudtasks_v2beta3.rb +1 -1
- data/generated/google/apis/cloudtasks_v2beta3/classes.rb +122 -90
- data/generated/google/apis/cloudtasks_v2beta3/service.rb +3 -2
- data/generated/google/apis/cloudtrace_v2.rb +1 -1
- data/generated/google/apis/cloudtrace_v2/classes.rb +10 -10
- data/generated/google/apis/composer_v1.rb +1 -1
- data/generated/google/apis/composer_v1/classes.rb +21 -15
- data/generated/google/apis/composer_v1beta1.rb +1 -1
- data/generated/google/apis/composer_v1beta1/classes.rb +165 -29
- data/generated/google/apis/composer_v1beta1/representations.rb +50 -0
- data/generated/google/apis/compute_alpha.rb +1 -1
- data/generated/google/apis/compute_alpha/classes.rb +7147 -4656
- data/generated/google/apis/compute_alpha/representations.rb +1205 -236
- data/generated/google/apis/compute_alpha/service.rb +4338 -3274
- data/generated/google/apis/compute_beta.rb +1 -1
- data/generated/google/apis/compute_beta/classes.rb +5974 -4567
- data/generated/google/apis/compute_beta/representations.rb +846 -283
- data/generated/google/apis/compute_beta/service.rb +4274 -3153
- data/generated/google/apis/compute_v1.rb +1 -1
- data/generated/google/apis/compute_v1/classes.rb +325 -50
- data/generated/google/apis/compute_v1/representations.rb +104 -1
- data/generated/google/apis/compute_v1/service.rb +153 -2
- data/generated/google/apis/container_v1.rb +1 -1
- data/generated/google/apis/container_v1/classes.rb +1 -0
- data/generated/google/apis/container_v1/service.rb +4 -4
- data/generated/google/apis/container_v1beta1.rb +1 -1
- data/generated/google/apis/container_v1beta1/classes.rb +7 -0
- data/generated/google/apis/container_v1beta1/representations.rb +2 -0
- data/generated/google/apis/container_v1beta1/service.rb +4 -4
- data/generated/google/apis/containeranalysis_v1alpha1.rb +1 -1
- data/generated/google/apis/containeranalysis_v1alpha1/classes.rb +25 -17
- data/generated/google/apis/containeranalysis_v1alpha1/representations.rb +1 -0
- data/generated/google/apis/containeranalysis_v1beta1.rb +1 -1
- data/generated/google/apis/containeranalysis_v1beta1/classes.rb +137 -12
- data/generated/google/apis/containeranalysis_v1beta1/representations.rb +33 -0
- data/generated/google/apis/content_v2.rb +1 -1
- data/generated/google/apis/content_v2/classes.rb +204 -93
- data/generated/google/apis/content_v2/representations.rb +49 -0
- data/generated/google/apis/content_v2/service.rb +82 -41
- data/generated/google/apis/content_v2_1.rb +1 -1
- data/generated/google/apis/content_v2_1/classes.rb +360 -209
- data/generated/google/apis/content_v2_1/representations.rb +129 -56
- data/generated/google/apis/content_v2_1/service.rb +97 -10
- data/generated/google/apis/dataflow_v1b3.rb +1 -1
- data/generated/google/apis/dataflow_v1b3/classes.rb +51 -19
- data/generated/google/apis/dataflow_v1b3/representations.rb +2 -0
- data/generated/google/apis/dataflow_v1b3/service.rb +133 -25
- data/generated/google/apis/dataproc_v1.rb +1 -1
- data/generated/google/apis/dataproc_v1/classes.rb +20 -15
- data/generated/google/apis/dataproc_v1/representations.rb +1 -0
- data/generated/google/apis/dataproc_v1beta2.rb +1 -1
- data/generated/google/apis/dataproc_v1beta2/classes.rb +516 -45
- data/generated/google/apis/dataproc_v1beta2/representations.rb +185 -7
- data/generated/google/apis/dataproc_v1beta2/service.rb +575 -6
- data/generated/google/apis/dfareporting_v3_3.rb +1 -1
- data/generated/google/apis/dfareporting_v3_3/classes.rb +3 -3
- data/generated/google/apis/dialogflow_v2.rb +1 -1
- data/generated/google/apis/dialogflow_v2/classes.rb +126 -77
- data/generated/google/apis/dialogflow_v2/service.rb +40 -24
- data/generated/google/apis/dialogflow_v2beta1.rb +1 -1
- data/generated/google/apis/dialogflow_v2beta1/classes.rb +126 -77
- data/generated/google/apis/dialogflow_v2beta1/service.rb +40 -24
- data/generated/google/apis/dlp_v2.rb +1 -1
- data/generated/google/apis/dlp_v2/classes.rb +44 -41
- data/generated/google/apis/dlp_v2/representations.rb +12 -0
- data/generated/google/apis/dlp_v2/service.rb +35 -0
- data/generated/google/apis/dns_v1.rb +1 -1
- data/generated/google/apis/dns_v1/classes.rb +163 -190
- data/generated/google/apis/dns_v1/representations.rb +34 -0
- data/generated/google/apis/dns_v1/service.rb +15 -110
- data/generated/google/apis/dns_v1beta2.rb +1 -1
- data/generated/google/apis/dns_v1beta2/classes.rb +117 -248
- data/generated/google/apis/dns_v1beta2/service.rb +21 -141
- data/generated/google/apis/dns_v2beta1.rb +1 -1
- data/generated/google/apis/dns_v2beta1/classes.rb +163 -190
- data/generated/google/apis/dns_v2beta1/representations.rb +34 -0
- data/generated/google/apis/dns_v2beta1/service.rb +15 -110
- data/generated/google/apis/docs_v1.rb +1 -1
- data/generated/google/apis/docs_v1/classes.rb +118 -47
- data/generated/google/apis/docs_v1/representations.rb +39 -0
- data/generated/google/apis/drive_v2.rb +1 -1
- data/generated/google/apis/drive_v2/service.rb +3 -1
- data/generated/google/apis/drive_v3.rb +1 -1
- data/generated/google/apis/drive_v3/service.rb +3 -2
- data/generated/google/apis/factchecktools_v1alpha1.rb +34 -0
- data/generated/google/apis/factchecktools_v1alpha1/classes.rb +459 -0
- data/generated/google/apis/factchecktools_v1alpha1/representations.rb +207 -0
- data/generated/google/apis/factchecktools_v1alpha1/service.rb +300 -0
- data/generated/google/apis/file_v1.rb +1 -1
- data/generated/google/apis/file_v1/classes.rb +203 -10
- data/generated/google/apis/file_v1/representations.rb +70 -0
- data/generated/google/apis/file_v1/service.rb +190 -0
- data/generated/google/apis/file_v1beta1.rb +1 -1
- data/generated/google/apis/file_v1beta1/classes.rb +10 -10
- data/generated/google/apis/firebasedynamiclinks_v1.rb +1 -1
- data/generated/google/apis/firebasedynamiclinks_v1/classes.rb +13 -10
- data/generated/google/apis/firebaserules_v1.rb +1 -1
- data/generated/google/apis/firebaserules_v1/service.rb +1 -1
- data/generated/google/apis/fitness_v1.rb +1 -1
- data/generated/google/apis/fitness_v1/classes.rb +3 -0
- data/generated/google/apis/fitness_v1/service.rb +1 -45
- data/generated/google/apis/games_management_v1management.rb +2 -2
- data/generated/google/apis/games_v1.rb +2 -2
- data/generated/google/apis/genomics_v1.rb +1 -10
- data/generated/google/apis/genomics_v1/classes.rb +190 -3321
- data/generated/google/apis/genomics_v1/representations.rb +128 -1265
- data/generated/google/apis/genomics_v1/service.rb +75 -1982
- data/generated/google/apis/genomics_v1alpha2.rb +1 -1
- data/generated/google/apis/genomics_v1alpha2/classes.rb +11 -51
- data/generated/google/apis/genomics_v1alpha2/representations.rb +0 -26
- data/generated/google/apis/genomics_v1alpha2/service.rb +1 -2
- data/generated/google/apis/genomics_v2alpha1.rb +1 -1
- data/generated/google/apis/genomics_v2alpha1/classes.rb +19 -58
- data/generated/google/apis/genomics_v2alpha1/representations.rb +0 -26
- data/generated/google/apis/genomics_v2alpha1/service.rb +1 -2
- data/generated/google/apis/groupssettings_v1.rb +2 -2
- data/generated/google/apis/groupssettings_v1/classes.rb +126 -1
- data/generated/google/apis/groupssettings_v1/representations.rb +18 -0
- data/generated/google/apis/groupssettings_v1/service.rb +1 -1
- data/generated/google/apis/iam_v1.rb +1 -1
- data/generated/google/apis/iam_v1/classes.rb +123 -1
- data/generated/google/apis/iam_v1/representations.rb +67 -0
- data/generated/google/apis/iam_v1/service.rb +198 -5
- data/generated/google/apis/iamcredentials_v1.rb +1 -1
- data/generated/google/apis/iamcredentials_v1/classes.rb +8 -4
- data/generated/google/apis/iamcredentials_v1/service.rb +10 -5
- data/generated/google/apis/iap_v1.rb +1 -1
- data/generated/google/apis/iap_v1/classes.rb +1 -1
- data/generated/google/apis/iap_v1beta1.rb +1 -1
- data/generated/google/apis/iap_v1beta1/classes.rb +1 -1
- data/generated/google/apis/jobs_v2.rb +1 -1
- data/generated/google/apis/jobs_v2/classes.rb +7 -9
- data/generated/google/apis/jobs_v3.rb +1 -1
- data/generated/google/apis/jobs_v3/classes.rb +1 -1
- data/generated/google/apis/jobs_v3p1beta1.rb +1 -1
- data/generated/google/apis/jobs_v3p1beta1/classes.rb +11 -11
- data/generated/google/apis/language_v1.rb +1 -1
- data/generated/google/apis/language_v1/classes.rb +5 -5
- data/generated/google/apis/language_v1beta1.rb +1 -1
- data/generated/google/apis/language_v1beta1/classes.rb +5 -5
- data/generated/google/apis/language_v1beta2.rb +1 -1
- data/generated/google/apis/language_v1beta2/classes.rb +5 -5
- data/generated/google/apis/logging_v2.rb +1 -1
- data/generated/google/apis/logging_v2/classes.rb +2 -3
- data/generated/google/apis/logging_v2beta1.rb +1 -1
- data/generated/google/apis/logging_v2beta1/classes.rb +2 -3
- data/generated/google/apis/ml_v1.rb +1 -1
- data/generated/google/apis/ml_v1/classes.rb +158 -36
- data/generated/google/apis/ml_v1/representations.rb +23 -2
- data/generated/google/apis/monitoring_v3.rb +1 -1
- data/generated/google/apis/monitoring_v3/classes.rb +8 -7
- data/generated/google/apis/monitoring_v3/service.rb +6 -1
- data/generated/google/apis/oauth2_v1.rb +2 -5
- data/generated/google/apis/oauth2_v1/classes.rb +0 -124
- data/generated/google/apis/oauth2_v1/representations.rb +0 -62
- data/generated/google/apis/oauth2_v1/service.rb +0 -159
- data/generated/google/apis/oauth2_v2.rb +2 -5
- data/generated/google/apis/people_v1.rb +3 -3
- data/generated/google/apis/people_v1/classes.rb +19 -18
- data/generated/google/apis/people_v1/service.rb +4 -0
- data/generated/google/apis/plus_domains_v1.rb +3 -3
- data/generated/google/apis/plus_v1.rb +3 -3
- data/generated/google/apis/poly_v1.rb +1 -1
- data/generated/google/apis/poly_v1/classes.rb +5 -4
- data/generated/google/apis/proximitybeacon_v1beta1.rb +1 -1
- data/generated/google/apis/proximitybeacon_v1beta1/classes.rb +8 -6
- data/generated/google/apis/pubsub_v1.rb +1 -1
- data/generated/google/apis/pubsub_v1/classes.rb +53 -38
- data/generated/google/apis/pubsub_v1/representations.rb +16 -0
- data/generated/google/apis/pubsub_v1/service.rb +6 -29
- data/generated/google/apis/pubsub_v1beta2.rb +1 -1
- data/generated/google/apis/pubsub_v1beta2/classes.rb +45 -1
- data/generated/google/apis/pubsub_v1beta2/representations.rb +16 -0
- data/generated/google/apis/redis_v1.rb +1 -1
- data/generated/google/apis/redis_v1beta1.rb +1 -1
- data/generated/google/apis/redis_v1beta1/classes.rb +0 -10
- data/generated/google/apis/redis_v1beta1/representations.rb +0 -1
- data/generated/google/apis/remotebuildexecution_v1.rb +1 -1
- data/generated/google/apis/remotebuildexecution_v1/classes.rb +42 -28
- data/generated/google/apis/remotebuildexecution_v1/representations.rb +2 -0
- data/generated/google/apis/remotebuildexecution_v1alpha.rb +1 -1
- data/generated/google/apis/remotebuildexecution_v1alpha/classes.rb +42 -28
- data/generated/google/apis/remotebuildexecution_v1alpha/representations.rb +2 -0
- data/generated/google/apis/remotebuildexecution_v2.rb +1 -1
- data/generated/google/apis/remotebuildexecution_v2/classes.rb +52 -38
- data/generated/google/apis/remotebuildexecution_v2/representations.rb +2 -0
- data/generated/google/apis/reseller_v1.rb +1 -1
- data/generated/google/apis/reseller_v1/classes.rb +32 -39
- data/generated/google/apis/reseller_v1/service.rb +1 -1
- data/generated/google/apis/runtimeconfig_v1.rb +1 -1
- data/generated/google/apis/runtimeconfig_v1/classes.rb +10 -10
- data/generated/google/apis/runtimeconfig_v1beta1.rb +1 -1
- data/generated/google/apis/runtimeconfig_v1beta1/classes.rb +25 -24
- data/generated/google/apis/script_v1.rb +1 -1
- data/generated/google/apis/script_v1/classes.rb +0 -6
- data/generated/google/apis/script_v1/representations.rb +0 -1
- data/generated/google/apis/serviceconsumermanagement_v1.rb +1 -1
- data/generated/google/apis/serviceconsumermanagement_v1/classes.rb +73 -151
- data/generated/google/apis/serviceconsumermanagement_v1/service.rb +48 -50
- data/generated/google/apis/servicecontrol_v1.rb +1 -1
- data/generated/google/apis/servicecontrol_v1/classes.rb +108 -24
- data/generated/google/apis/servicecontrol_v1/representations.rb +45 -0
- data/generated/google/apis/servicemanagement_v1.rb +1 -1
- data/generated/google/apis/servicemanagement_v1/classes.rb +35 -113
- data/generated/google/apis/servicemanagement_v1/service.rb +6 -3
- data/generated/google/apis/servicenetworking_v1.rb +38 -0
- data/generated/google/apis/servicenetworking_v1/classes.rb +3591 -0
- data/generated/google/apis/servicenetworking_v1/representations.rb +1082 -0
- data/generated/google/apis/servicenetworking_v1/service.rb +440 -0
- data/generated/google/apis/servicenetworking_v1beta.rb +1 -1
- data/generated/google/apis/servicenetworking_v1beta/classes.rb +32 -110
- data/generated/google/apis/serviceusage_v1.rb +1 -1
- data/generated/google/apis/serviceusage_v1/classes.rb +33 -150
- data/generated/google/apis/serviceusage_v1beta1.rb +1 -1
- data/generated/google/apis/serviceusage_v1beta1/classes.rb +34 -190
- data/generated/google/apis/sheets_v4.rb +1 -1
- data/generated/google/apis/sheets_v4/classes.rb +115 -26
- data/generated/google/apis/slides_v1.rb +1 -1
- data/generated/google/apis/slides_v1/classes.rb +2 -2
- data/generated/google/apis/sourcerepo_v1.rb +1 -1
- data/generated/google/apis/sourcerepo_v1/classes.rb +1 -1
- data/generated/google/apis/spanner_v1.rb +1 -1
- data/generated/google/apis/spanner_v1/classes.rb +171 -0
- data/generated/google/apis/spanner_v1/representations.rb +49 -0
- data/generated/google/apis/spanner_v1/service.rb +51 -1
- data/generated/google/apis/speech_v1.rb +1 -1
- data/generated/google/apis/speech_v1/classes.rb +107 -10
- data/generated/google/apis/speech_v1/representations.rb +24 -0
- data/generated/google/apis/speech_v1p1beta1.rb +1 -1
- data/generated/google/apis/speech_v1p1beta1/classes.rb +16 -10
- data/generated/google/apis/speech_v1p1beta1/representations.rb +1 -0
- data/generated/google/apis/sqladmin_v1beta4.rb +1 -1
- data/generated/google/apis/sqladmin_v1beta4/classes.rb +11 -15
- data/generated/google/apis/sqladmin_v1beta4/representations.rb +1 -0
- data/generated/google/apis/storage_v1.rb +1 -1
- data/generated/google/apis/storage_v1/classes.rb +57 -4
- data/generated/google/apis/storage_v1/representations.rb +19 -1
- data/generated/google/apis/storagetransfer_v1.rb +2 -2
- data/generated/google/apis/storagetransfer_v1/classes.rb +28 -21
- data/generated/google/apis/storagetransfer_v1/service.rb +4 -4
- data/generated/google/apis/streetviewpublish_v1.rb +1 -1
- data/generated/google/apis/streetviewpublish_v1/classes.rb +26 -26
- data/generated/google/apis/streetviewpublish_v1/service.rb +27 -31
- data/generated/google/apis/tagmanager_v1.rb +1 -1
- data/generated/google/apis/tagmanager_v1/service.rb +0 -46
- data/generated/google/apis/tagmanager_v2.rb +1 -1
- data/generated/google/apis/tagmanager_v2/classes.rb +197 -292
- data/generated/google/apis/tagmanager_v2/representations.rb +62 -103
- data/generated/google/apis/tagmanager_v2/service.rb +219 -181
- data/generated/google/apis/tasks_v1.rb +2 -2
- data/generated/google/apis/tasks_v1/service.rb +5 -5
- data/generated/google/apis/testing_v1.rb +1 -1
- data/generated/google/apis/testing_v1/classes.rb +13 -13
- data/generated/google/apis/toolresults_v1beta3.rb +1 -1
- data/generated/google/apis/toolresults_v1beta3/classes.rb +92 -0
- data/generated/google/apis/toolresults_v1beta3/representations.rb +47 -0
- data/generated/google/apis/tpu_v1.rb +1 -1
- data/generated/google/apis/tpu_v1/classes.rb +10 -10
- data/generated/google/apis/tpu_v1alpha1.rb +1 -1
- data/generated/google/apis/tpu_v1alpha1/classes.rb +10 -10
- data/generated/google/apis/vault_v1.rb +1 -1
- data/generated/google/apis/vault_v1/classes.rb +7 -0
- data/generated/google/apis/vault_v1/representations.rb +1 -0
- data/generated/google/apis/videointelligence_v1.rb +3 -2
- data/generated/google/apis/videointelligence_v1/classes.rb +2193 -350
- data/generated/google/apis/videointelligence_v1/representations.rb +805 -6
- data/generated/google/apis/videointelligence_v1/service.rb +2 -1
- data/generated/google/apis/videointelligence_v1beta2.rb +3 -2
- data/generated/google/apis/videointelligence_v1beta2/classes.rb +2448 -605
- data/generated/google/apis/videointelligence_v1beta2/representations.rb +806 -7
- data/generated/google/apis/videointelligence_v1beta2/service.rb +2 -1
- data/generated/google/apis/videointelligence_v1p1beta1.rb +3 -2
- data/generated/google/apis/videointelligence_v1p1beta1/classes.rb +2422 -579
- data/generated/google/apis/videointelligence_v1p1beta1/representations.rb +806 -7
- data/generated/google/apis/videointelligence_v1p1beta1/service.rb +2 -1
- data/generated/google/apis/videointelligence_v1p2beta1.rb +3 -2
- data/generated/google/apis/videointelligence_v1p2beta1/classes.rb +2645 -830
- data/generated/google/apis/videointelligence_v1p2beta1/representations.rb +796 -12
- data/generated/google/apis/videointelligence_v1p2beta1/service.rb +2 -1
- data/generated/google/apis/videointelligence_v1p3beta1.rb +36 -0
- data/generated/google/apis/videointelligence_v1p3beta1/classes.rb +4687 -0
- data/generated/google/apis/videointelligence_v1p3beta1/representations.rb +2005 -0
- data/generated/google/apis/videointelligence_v1p3beta1/service.rb +94 -0
- data/generated/google/apis/vision_v1.rb +1 -1
- data/generated/google/apis/vision_v1/classes.rb +1977 -40
- data/generated/google/apis/vision_v1/representations.rb +833 -0
- data/generated/google/apis/vision_v1p1beta1.rb +1 -1
- data/generated/google/apis/vision_v1p1beta1/classes.rb +1972 -35
- data/generated/google/apis/vision_v1p1beta1/representations.rb +833 -0
- data/generated/google/apis/vision_v1p2beta1.rb +1 -1
- data/generated/google/apis/vision_v1p2beta1/classes.rb +1972 -35
- data/generated/google/apis/vision_v1p2beta1/representations.rb +833 -0
- data/generated/google/apis/websecurityscanner_v1beta.rb +34 -0
- data/generated/google/apis/websecurityscanner_v1beta/classes.rb +973 -0
- data/generated/google/apis/websecurityscanner_v1beta/representations.rb +452 -0
- data/generated/google/apis/websecurityscanner_v1beta/service.rb +548 -0
- data/generated/google/apis/youtube_partner_v1.rb +1 -1
- data/generated/google/apis/youtubereporting_v1.rb +1 -1
- data/lib/google/apis/core/http_command.rb +1 -0
- data/lib/google/apis/generator/model.rb +1 -1
- data/lib/google/apis/version.rb +1 -1
- metadata +39 -8
- data/generated/google/apis/partners_v2/classes.rb +0 -2260
- data/generated/google/apis/partners_v2/representations.rb +0 -905
- data/generated/google/apis/partners_v2/service.rb +0 -1077
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def create_annotation(annotation_object = nil, fields: nil, quota_user: nil, options: nil, &block)
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def delete_annotation(annotation_id, fields: nil, quota_user: nil, options: nil, &block)
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def get_annotation(annotation_id, fields: nil, quota_user: nil, options: nil, &block)
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# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
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def search_annotations(search_annotations_request_object = nil, fields: nil, quota_user: nil, options: nil, &block)
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# @param [String] annotation_id
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# @param [String] fields
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# @yieldparam result [Google::Apis::GenomicsV1::Annotation] parsed result object
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#
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# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
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# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
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# @raise [Google::Apis::AuthorizationError] Authorization is required
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def update_annotation(annotation_id, annotation_object = nil, update_mask: nil, fields: nil, quota_user: nil, options: nil, &block)
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command = make_simple_command(:put, 'v1/annotations/{annotationId}', options)
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command.request_representation = Google::Apis::GenomicsV1::Annotation::Representation
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command.request_object = annotation_object
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command.response_representation = Google::Apis::GenomicsV1::Annotation::Representation
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command.response_class = Google::Apis::GenomicsV1::Annotation
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command.params['annotationId'] = annotation_id unless annotation_id.nil?
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command.query['updateMask'] = update_mask unless update_mask.nil?
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command.query['fields'] = fields unless fields.nil?
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command.query['quotaUser'] = quota_user unless quota_user.nil?
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execute_or_queue_command(command, &block)
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end
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# Creates a new annotation set. Caller must have WRITE permission for the
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# associated dataset.
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# The following fields are required:
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# * datasetId
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# * referenceSetId
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# All other fields may be optionally specified, unless documented as being
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# server-generated (for example, the `id` field).
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# @param [Google::Apis::GenomicsV1::AnnotationSet] annotation_set_object
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# @param [String] fields
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# Selector specifying which fields to include in a partial response.
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# @param [String] quota_user
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# Available to use for quota purposes for server-side applications. Can be any
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# arbitrary string assigned to a user, but should not exceed 40 characters.
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# @param [Google::Apis::RequestOptions] options
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# Request-specific options
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#
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# @yield [result, err] Result & error if block supplied
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# @yieldparam result [Google::Apis::GenomicsV1::AnnotationSet] parsed result object
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# @yieldparam err [StandardError] error object if request failed
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#
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# @return [Google::Apis::GenomicsV1::AnnotationSet]
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#
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# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
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# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
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# @raise [Google::Apis::AuthorizationError] Authorization is required
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def create_annotation_set(annotation_set_object = nil, fields: nil, quota_user: nil, options: nil, &block)
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command = make_simple_command(:post, 'v1/annotationsets', options)
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command.request_representation = Google::Apis::GenomicsV1::AnnotationSet::Representation
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command.request_object = annotation_set_object
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command.response_representation = Google::Apis::GenomicsV1::AnnotationSet::Representation
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command.response_class = Google::Apis::GenomicsV1::AnnotationSet
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command.query['fields'] = fields unless fields.nil?
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command.query['quotaUser'] = quota_user unless quota_user.nil?
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execute_or_queue_command(command, &block)
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end
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# Deletes an annotation set. Caller must have WRITE permission
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# for the associated annotation set.
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# @param [String] annotation_set_id
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# The ID of the annotation set to be deleted.
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# @param [String] fields
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# Selector specifying which fields to include in a partial response.
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# @param [String] quota_user
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# Available to use for quota purposes for server-side applications. Can be any
|
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# arbitrary string assigned to a user, but should not exceed 40 characters.
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# @param [Google::Apis::RequestOptions] options
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# Request-specific options
|
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#
|
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# @yield [result, err] Result & error if block supplied
|
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|
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# @yieldparam result [Google::Apis::GenomicsV1::Empty] parsed result object
|
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# @yieldparam err [StandardError] error object if request failed
|
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|
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#
|
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# @return [Google::Apis::GenomicsV1::Empty]
|
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|
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#
|
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|
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# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
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|
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# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
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|
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# @raise [Google::Apis::AuthorizationError] Authorization is required
|
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|
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def delete_annotationset(annotation_set_id, fields: nil, quota_user: nil, options: nil, &block)
|
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|
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command = make_simple_command(:delete, 'v1/annotationsets/{annotationSetId}', options)
|
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|
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command.response_representation = Google::Apis::GenomicsV1::Empty::Representation
|
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|
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command.response_class = Google::Apis::GenomicsV1::Empty
|
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|
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command.params['annotationSetId'] = annotation_set_id unless annotation_set_id.nil?
|
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|
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command.query['fields'] = fields unless fields.nil?
|
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|
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command.query['quotaUser'] = quota_user unless quota_user.nil?
|
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|
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execute_or_queue_command(command, &block)
|
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|
-
end
|
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|
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|
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|
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# Gets an annotation set. Caller must have READ permission for
|
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|
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# the associated dataset.
|
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|
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# @param [String] annotation_set_id
|
346
|
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# The ID of the annotation set to be retrieved.
|
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|
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# @param [String] fields
|
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|
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# Selector specifying which fields to include in a partial response.
|
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|
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# @param [String] quota_user
|
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|
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# Available to use for quota purposes for server-side applications. Can be any
|
351
|
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# arbitrary string assigned to a user, but should not exceed 40 characters.
|
352
|
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# @param [Google::Apis::RequestOptions] options
|
353
|
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# Request-specific options
|
354
|
-
#
|
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|
-
# @yield [result, err] Result & error if block supplied
|
356
|
-
# @yieldparam result [Google::Apis::GenomicsV1::AnnotationSet] parsed result object
|
357
|
-
# @yieldparam err [StandardError] error object if request failed
|
358
|
-
#
|
359
|
-
# @return [Google::Apis::GenomicsV1::AnnotationSet]
|
360
|
-
#
|
361
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
362
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
363
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
364
|
-
def get_annotation_set(annotation_set_id, fields: nil, quota_user: nil, options: nil, &block)
|
365
|
-
command = make_simple_command(:get, 'v1/annotationsets/{annotationSetId}', options)
|
366
|
-
command.response_representation = Google::Apis::GenomicsV1::AnnotationSet::Representation
|
367
|
-
command.response_class = Google::Apis::GenomicsV1::AnnotationSet
|
368
|
-
command.params['annotationSetId'] = annotation_set_id unless annotation_set_id.nil?
|
369
|
-
command.query['fields'] = fields unless fields.nil?
|
370
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
371
|
-
execute_or_queue_command(command, &block)
|
372
|
-
end
|
373
|
-
|
374
|
-
# Searches for annotation sets that match the given criteria. Annotation sets
|
375
|
-
# are returned in an unspecified order. This order is consistent, such that
|
376
|
-
# two queries for the same content (regardless of page size) yield annotation
|
377
|
-
# sets in the same order across their respective streams of paginated
|
378
|
-
# responses. Caller must have READ permission for the queried datasets.
|
379
|
-
# @param [Google::Apis::GenomicsV1::SearchAnnotationSetsRequest] search_annotation_sets_request_object
|
380
|
-
# @param [String] fields
|
381
|
-
# Selector specifying which fields to include in a partial response.
|
382
|
-
# @param [String] quota_user
|
383
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
384
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
385
|
-
# @param [Google::Apis::RequestOptions] options
|
386
|
-
# Request-specific options
|
387
|
-
#
|
388
|
-
# @yield [result, err] Result & error if block supplied
|
389
|
-
# @yieldparam result [Google::Apis::GenomicsV1::SearchAnnotationSetsResponse] parsed result object
|
390
|
-
# @yieldparam err [StandardError] error object if request failed
|
391
|
-
#
|
392
|
-
# @return [Google::Apis::GenomicsV1::SearchAnnotationSetsResponse]
|
393
|
-
#
|
394
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
395
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
396
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
397
|
-
def search_annotationset_annotation_sets(search_annotation_sets_request_object = nil, fields: nil, quota_user: nil, options: nil, &block)
|
398
|
-
command = make_simple_command(:post, 'v1/annotationsets/search', options)
|
399
|
-
command.request_representation = Google::Apis::GenomicsV1::SearchAnnotationSetsRequest::Representation
|
400
|
-
command.request_object = search_annotation_sets_request_object
|
401
|
-
command.response_representation = Google::Apis::GenomicsV1::SearchAnnotationSetsResponse::Representation
|
402
|
-
command.response_class = Google::Apis::GenomicsV1::SearchAnnotationSetsResponse
|
403
|
-
command.query['fields'] = fields unless fields.nil?
|
404
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
405
|
-
execute_or_queue_command(command, &block)
|
406
|
-
end
|
407
|
-
|
408
|
-
# Updates an annotation set. The update must respect all mutability
|
409
|
-
# restrictions and other invariants described on the annotation set resource.
|
410
|
-
# Caller must have WRITE permission for the associated dataset.
|
411
|
-
# @param [String] annotation_set_id
|
412
|
-
# The ID of the annotation set to be updated.
|
413
|
-
# @param [Google::Apis::GenomicsV1::AnnotationSet] annotation_set_object
|
414
|
-
# @param [String] update_mask
|
415
|
-
# An optional mask specifying which fields to update. Mutable fields are
|
416
|
-
# name,
|
417
|
-
# source_uri, and
|
418
|
-
# info. If unspecified, all
|
419
|
-
# mutable fields will be updated.
|
420
|
-
# @param [String] fields
|
421
|
-
# Selector specifying which fields to include in a partial response.
|
422
|
-
# @param [String] quota_user
|
423
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
424
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
425
|
-
# @param [Google::Apis::RequestOptions] options
|
426
|
-
# Request-specific options
|
427
|
-
#
|
428
|
-
# @yield [result, err] Result & error if block supplied
|
429
|
-
# @yieldparam result [Google::Apis::GenomicsV1::AnnotationSet] parsed result object
|
430
|
-
# @yieldparam err [StandardError] error object if request failed
|
431
|
-
#
|
432
|
-
# @return [Google::Apis::GenomicsV1::AnnotationSet]
|
433
|
-
#
|
434
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
435
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
436
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
437
|
-
def update_annotationset(annotation_set_id, annotation_set_object = nil, update_mask: nil, fields: nil, quota_user: nil, options: nil, &block)
|
438
|
-
command = make_simple_command(:put, 'v1/annotationsets/{annotationSetId}', options)
|
439
|
-
command.request_representation = Google::Apis::GenomicsV1::AnnotationSet::Representation
|
440
|
-
command.request_object = annotation_set_object
|
441
|
-
command.response_representation = Google::Apis::GenomicsV1::AnnotationSet::Representation
|
442
|
-
command.response_class = Google::Apis::GenomicsV1::AnnotationSet
|
443
|
-
command.params['annotationSetId'] = annotation_set_id unless annotation_set_id.nil?
|
444
|
-
command.query['updateMask'] = update_mask unless update_mask.nil?
|
445
|
-
command.query['fields'] = fields unless fields.nil?
|
446
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
447
|
-
execute_or_queue_command(command, &block)
|
448
|
-
end
|
449
|
-
|
450
|
-
# Creates a new call set.
|
451
|
-
# @param [Google::Apis::GenomicsV1::CallSet] call_set_object
|
452
|
-
# @param [String] fields
|
453
|
-
# Selector specifying which fields to include in a partial response.
|
454
|
-
# @param [String] quota_user
|
455
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
456
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
457
|
-
# @param [Google::Apis::RequestOptions] options
|
458
|
-
# Request-specific options
|
459
|
-
#
|
460
|
-
# @yield [result, err] Result & error if block supplied
|
461
|
-
# @yieldparam result [Google::Apis::GenomicsV1::CallSet] parsed result object
|
462
|
-
# @yieldparam err [StandardError] error object if request failed
|
463
|
-
#
|
464
|
-
# @return [Google::Apis::GenomicsV1::CallSet]
|
465
|
-
#
|
466
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
467
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
468
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
469
|
-
def create_call_set(call_set_object = nil, fields: nil, quota_user: nil, options: nil, &block)
|
470
|
-
command = make_simple_command(:post, 'v1/callsets', options)
|
471
|
-
command.request_representation = Google::Apis::GenomicsV1::CallSet::Representation
|
472
|
-
command.request_object = call_set_object
|
473
|
-
command.response_representation = Google::Apis::GenomicsV1::CallSet::Representation
|
474
|
-
command.response_class = Google::Apis::GenomicsV1::CallSet
|
475
|
-
command.query['fields'] = fields unless fields.nil?
|
476
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
477
|
-
execute_or_queue_command(command, &block)
|
478
|
-
end
|
479
|
-
|
480
|
-
# Deletes a call set.
|
481
|
-
# @param [String] call_set_id
|
482
|
-
# The ID of the call set to be deleted.
|
483
|
-
# @param [String] fields
|
484
|
-
# Selector specifying which fields to include in a partial response.
|
485
|
-
# @param [String] quota_user
|
486
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
487
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
488
|
-
# @param [Google::Apis::RequestOptions] options
|
489
|
-
# Request-specific options
|
490
|
-
#
|
491
|
-
# @yield [result, err] Result & error if block supplied
|
492
|
-
# @yieldparam result [Google::Apis::GenomicsV1::Empty] parsed result object
|
493
|
-
# @yieldparam err [StandardError] error object if request failed
|
494
|
-
#
|
495
|
-
# @return [Google::Apis::GenomicsV1::Empty]
|
496
|
-
#
|
497
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
498
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
499
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
500
|
-
def delete_call_set(call_set_id, fields: nil, quota_user: nil, options: nil, &block)
|
501
|
-
command = make_simple_command(:delete, 'v1/callsets/{callSetId}', options)
|
502
|
-
command.response_representation = Google::Apis::GenomicsV1::Empty::Representation
|
503
|
-
command.response_class = Google::Apis::GenomicsV1::Empty
|
504
|
-
command.params['callSetId'] = call_set_id unless call_set_id.nil?
|
505
|
-
command.query['fields'] = fields unless fields.nil?
|
506
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
507
|
-
execute_or_queue_command(command, &block)
|
508
|
-
end
|
509
|
-
|
510
|
-
# Gets a call set by ID.
|
511
|
-
# @param [String] call_set_id
|
512
|
-
# The ID of the call set.
|
513
|
-
# @param [String] fields
|
514
|
-
# Selector specifying which fields to include in a partial response.
|
515
|
-
# @param [String] quota_user
|
516
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
517
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
518
|
-
# @param [Google::Apis::RequestOptions] options
|
519
|
-
# Request-specific options
|
520
|
-
#
|
521
|
-
# @yield [result, err] Result & error if block supplied
|
522
|
-
# @yieldparam result [Google::Apis::GenomicsV1::CallSet] parsed result object
|
523
|
-
# @yieldparam err [StandardError] error object if request failed
|
524
|
-
#
|
525
|
-
# @return [Google::Apis::GenomicsV1::CallSet]
|
526
|
-
#
|
527
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
528
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
529
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
530
|
-
def get_call_set(call_set_id, fields: nil, quota_user: nil, options: nil, &block)
|
531
|
-
command = make_simple_command(:get, 'v1/callsets/{callSetId}', options)
|
532
|
-
command.response_representation = Google::Apis::GenomicsV1::CallSet::Representation
|
533
|
-
command.response_class = Google::Apis::GenomicsV1::CallSet
|
534
|
-
command.params['callSetId'] = call_set_id unless call_set_id.nil?
|
535
|
-
command.query['fields'] = fields unless fields.nil?
|
536
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
537
|
-
execute_or_queue_command(command, &block)
|
538
|
-
end
|
539
|
-
|
540
|
-
# Updates a call set.
|
541
|
-
# This method supports patch semantics.
|
542
|
-
# @param [String] call_set_id
|
543
|
-
# The ID of the call set to be updated.
|
544
|
-
# @param [Google::Apis::GenomicsV1::CallSet] call_set_object
|
545
|
-
# @param [String] update_mask
|
546
|
-
# An optional mask specifying which fields to update. At this time, the only
|
547
|
-
# mutable field is name. The only
|
548
|
-
# acceptable value is "name". If unspecified, all mutable fields will be
|
549
|
-
# updated.
|
550
|
-
# @param [String] fields
|
551
|
-
# Selector specifying which fields to include in a partial response.
|
552
|
-
# @param [String] quota_user
|
553
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
554
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
555
|
-
# @param [Google::Apis::RequestOptions] options
|
556
|
-
# Request-specific options
|
557
|
-
#
|
558
|
-
# @yield [result, err] Result & error if block supplied
|
559
|
-
# @yieldparam result [Google::Apis::GenomicsV1::CallSet] parsed result object
|
560
|
-
# @yieldparam err [StandardError] error object if request failed
|
561
|
-
#
|
562
|
-
# @return [Google::Apis::GenomicsV1::CallSet]
|
563
|
-
#
|
564
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
565
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
566
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
567
|
-
def patch_call_set(call_set_id, call_set_object = nil, update_mask: nil, fields: nil, quota_user: nil, options: nil, &block)
|
568
|
-
command = make_simple_command(:patch, 'v1/callsets/{callSetId}', options)
|
569
|
-
command.request_representation = Google::Apis::GenomicsV1::CallSet::Representation
|
570
|
-
command.request_object = call_set_object
|
571
|
-
command.response_representation = Google::Apis::GenomicsV1::CallSet::Representation
|
572
|
-
command.response_class = Google::Apis::GenomicsV1::CallSet
|
573
|
-
command.params['callSetId'] = call_set_id unless call_set_id.nil?
|
574
|
-
command.query['updateMask'] = update_mask unless update_mask.nil?
|
575
|
-
command.query['fields'] = fields unless fields.nil?
|
576
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
577
|
-
execute_or_queue_command(command, &block)
|
578
|
-
end
|
579
|
-
|
580
|
-
# Gets a list of call sets matching the criteria.
|
581
|
-
# Implements
|
582
|
-
# [GlobalAllianceApi.searchCallSets](https://github.com/ga4gh/schemas/blob/v0.5.
|
583
|
-
# 1/src/main/resources/avro/variantmethods.avdl#L178).
|
584
|
-
# @param [Google::Apis::GenomicsV1::SearchCallSetsRequest] search_call_sets_request_object
|
585
|
-
# @param [String] fields
|
586
|
-
# Selector specifying which fields to include in a partial response.
|
587
|
-
# @param [String] quota_user
|
588
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
589
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
590
|
-
# @param [Google::Apis::RequestOptions] options
|
591
|
-
# Request-specific options
|
592
|
-
#
|
593
|
-
# @yield [result, err] Result & error if block supplied
|
594
|
-
# @yieldparam result [Google::Apis::GenomicsV1::SearchCallSetsResponse] parsed result object
|
595
|
-
# @yieldparam err [StandardError] error object if request failed
|
596
|
-
#
|
597
|
-
# @return [Google::Apis::GenomicsV1::SearchCallSetsResponse]
|
598
|
-
#
|
599
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
600
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
601
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
602
|
-
def search_call_sets(search_call_sets_request_object = nil, fields: nil, quota_user: nil, options: nil, &block)
|
603
|
-
command = make_simple_command(:post, 'v1/callsets/search', options)
|
604
|
-
command.request_representation = Google::Apis::GenomicsV1::SearchCallSetsRequest::Representation
|
605
|
-
command.request_object = search_call_sets_request_object
|
606
|
-
command.response_representation = Google::Apis::GenomicsV1::SearchCallSetsResponse::Representation
|
607
|
-
command.response_class = Google::Apis::GenomicsV1::SearchCallSetsResponse
|
608
|
-
command.query['fields'] = fields unless fields.nil?
|
609
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
610
|
-
execute_or_queue_command(command, &block)
|
611
|
-
end
|
612
|
-
|
613
|
-
# Creates a new dataset.
|
614
|
-
# @param [Google::Apis::GenomicsV1::Dataset] dataset_object
|
615
|
-
# @param [String] fields
|
616
|
-
# Selector specifying which fields to include in a partial response.
|
617
|
-
# @param [String] quota_user
|
618
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
619
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
620
|
-
# @param [Google::Apis::RequestOptions] options
|
621
|
-
# Request-specific options
|
622
|
-
#
|
623
|
-
# @yield [result, err] Result & error if block supplied
|
624
|
-
# @yieldparam result [Google::Apis::GenomicsV1::Dataset] parsed result object
|
625
|
-
# @yieldparam err [StandardError] error object if request failed
|
626
|
-
#
|
627
|
-
# @return [Google::Apis::GenomicsV1::Dataset]
|
628
|
-
#
|
629
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
630
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
631
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
632
|
-
def create_dataset(dataset_object = nil, fields: nil, quota_user: nil, options: nil, &block)
|
633
|
-
command = make_simple_command(:post, 'v1/datasets', options)
|
634
|
-
command.request_representation = Google::Apis::GenomicsV1::Dataset::Representation
|
635
|
-
command.request_object = dataset_object
|
636
|
-
command.response_representation = Google::Apis::GenomicsV1::Dataset::Representation
|
637
|
-
command.response_class = Google::Apis::GenomicsV1::Dataset
|
638
|
-
command.query['fields'] = fields unless fields.nil?
|
639
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
640
|
-
execute_or_queue_command(command, &block)
|
641
|
-
end
|
642
|
-
|
643
|
-
# Deletes a dataset and all of its contents (all read group sets,
|
644
|
-
# reference sets, variant sets, call sets, annotation sets, etc.)
|
645
|
-
# This is reversible (up to one week after the deletion) via
|
646
|
-
# the
|
647
|
-
# datasets.undelete
|
648
|
-
# operation.
|
649
|
-
# @param [String] dataset_id
|
650
|
-
# The ID of the dataset to be deleted.
|
651
|
-
# @param [String] fields
|
652
|
-
# Selector specifying which fields to include in a partial response.
|
653
|
-
# @param [String] quota_user
|
654
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
655
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
656
|
-
# @param [Google::Apis::RequestOptions] options
|
657
|
-
# Request-specific options
|
658
|
-
#
|
659
|
-
# @yield [result, err] Result & error if block supplied
|
660
|
-
# @yieldparam result [Google::Apis::GenomicsV1::Empty] parsed result object
|
661
|
-
# @yieldparam err [StandardError] error object if request failed
|
662
|
-
#
|
663
|
-
# @return [Google::Apis::GenomicsV1::Empty]
|
664
|
-
#
|
665
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
666
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
667
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
668
|
-
def delete_dataset(dataset_id, fields: nil, quota_user: nil, options: nil, &block)
|
669
|
-
command = make_simple_command(:delete, 'v1/datasets/{datasetId}', options)
|
670
|
-
command.response_representation = Google::Apis::GenomicsV1::Empty::Representation
|
671
|
-
command.response_class = Google::Apis::GenomicsV1::Empty
|
672
|
-
command.params['datasetId'] = dataset_id unless dataset_id.nil?
|
673
|
-
command.query['fields'] = fields unless fields.nil?
|
674
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
675
|
-
execute_or_queue_command(command, &block)
|
676
|
-
end
|
677
|
-
|
678
|
-
# Gets a dataset by ID.
|
679
|
-
# @param [String] dataset_id
|
680
|
-
# The ID of the dataset.
|
681
|
-
# @param [String] fields
|
682
|
-
# Selector specifying which fields to include in a partial response.
|
683
|
-
# @param [String] quota_user
|
684
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
685
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
686
|
-
# @param [Google::Apis::RequestOptions] options
|
687
|
-
# Request-specific options
|
688
|
-
#
|
689
|
-
# @yield [result, err] Result & error if block supplied
|
690
|
-
# @yieldparam result [Google::Apis::GenomicsV1::Dataset] parsed result object
|
691
|
-
# @yieldparam err [StandardError] error object if request failed
|
692
|
-
#
|
693
|
-
# @return [Google::Apis::GenomicsV1::Dataset]
|
694
|
-
#
|
695
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
696
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
697
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
698
|
-
def get_dataset(dataset_id, fields: nil, quota_user: nil, options: nil, &block)
|
699
|
-
command = make_simple_command(:get, 'v1/datasets/{datasetId}', options)
|
700
|
-
command.response_representation = Google::Apis::GenomicsV1::Dataset::Representation
|
701
|
-
command.response_class = Google::Apis::GenomicsV1::Dataset
|
702
|
-
command.params['datasetId'] = dataset_id unless dataset_id.nil?
|
703
|
-
command.query['fields'] = fields unless fields.nil?
|
704
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
705
|
-
execute_or_queue_command(command, &block)
|
706
|
-
end
|
707
|
-
|
708
|
-
# Gets the access control policy for the dataset. This is empty if the
|
709
|
-
# policy or resource does not exist.
|
710
|
-
# See <a href="/iam/docs/managing-policies#getting_a_policy">Getting a
|
711
|
-
# Policy</a> for more information.
|
712
|
-
# @param [String] resource
|
713
|
-
# REQUIRED: The resource for which policy is being specified. Format is
|
714
|
-
# `datasets/<dataset ID>`.
|
715
|
-
# @param [Google::Apis::GenomicsV1::GetIamPolicyRequest] get_iam_policy_request_object
|
716
|
-
# @param [String] fields
|
717
|
-
# Selector specifying which fields to include in a partial response.
|
718
|
-
# @param [String] quota_user
|
719
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
720
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
721
|
-
# @param [Google::Apis::RequestOptions] options
|
722
|
-
# Request-specific options
|
723
|
-
#
|
724
|
-
# @yield [result, err] Result & error if block supplied
|
725
|
-
# @yieldparam result [Google::Apis::GenomicsV1::Policy] parsed result object
|
726
|
-
# @yieldparam err [StandardError] error object if request failed
|
727
|
-
#
|
728
|
-
# @return [Google::Apis::GenomicsV1::Policy]
|
729
|
-
#
|
730
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
731
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
732
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
733
|
-
def get_dataset_iam_policy(resource, get_iam_policy_request_object = nil, fields: nil, quota_user: nil, options: nil, &block)
|
734
|
-
command = make_simple_command(:post, 'v1/{+resource}:getIamPolicy', options)
|
735
|
-
command.request_representation = Google::Apis::GenomicsV1::GetIamPolicyRequest::Representation
|
736
|
-
command.request_object = get_iam_policy_request_object
|
737
|
-
command.response_representation = Google::Apis::GenomicsV1::Policy::Representation
|
738
|
-
command.response_class = Google::Apis::GenomicsV1::Policy
|
739
|
-
command.params['resource'] = resource unless resource.nil?
|
740
|
-
command.query['fields'] = fields unless fields.nil?
|
741
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
742
|
-
execute_or_queue_command(command, &block)
|
743
|
-
end
|
744
|
-
|
745
|
-
# Lists datasets within a project.
|
746
|
-
# @param [Fixnum] page_size
|
747
|
-
# The maximum number of results to return in a single page. If unspecified,
|
748
|
-
# defaults to 50. The maximum value is 1024.
|
749
|
-
# @param [String] page_token
|
750
|
-
# The continuation token, which is used to page through large result sets.
|
751
|
-
# To get the next page of results, set this parameter to the value of
|
752
|
-
# `nextPageToken` from the previous response.
|
753
|
-
# @param [String] project_id
|
754
|
-
# Required. The Google Cloud project ID to list datasets for.
|
755
|
-
# @param [String] fields
|
756
|
-
# Selector specifying which fields to include in a partial response.
|
757
|
-
# @param [String] quota_user
|
758
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
759
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
760
|
-
# @param [Google::Apis::RequestOptions] options
|
761
|
-
# Request-specific options
|
762
|
-
#
|
763
|
-
# @yield [result, err] Result & error if block supplied
|
764
|
-
# @yieldparam result [Google::Apis::GenomicsV1::ListDatasetsResponse] parsed result object
|
765
|
-
# @yieldparam err [StandardError] error object if request failed
|
766
|
-
#
|
767
|
-
# @return [Google::Apis::GenomicsV1::ListDatasetsResponse]
|
768
|
-
#
|
769
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
770
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
771
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
772
|
-
def list_datasets(page_size: nil, page_token: nil, project_id: nil, fields: nil, quota_user: nil, options: nil, &block)
|
773
|
-
command = make_simple_command(:get, 'v1/datasets', options)
|
774
|
-
command.response_representation = Google::Apis::GenomicsV1::ListDatasetsResponse::Representation
|
775
|
-
command.response_class = Google::Apis::GenomicsV1::ListDatasetsResponse
|
776
|
-
command.query['pageSize'] = page_size unless page_size.nil?
|
777
|
-
command.query['pageToken'] = page_token unless page_token.nil?
|
778
|
-
command.query['projectId'] = project_id unless project_id.nil?
|
779
|
-
command.query['fields'] = fields unless fields.nil?
|
780
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
781
|
-
execute_or_queue_command(command, &block)
|
782
|
-
end
|
783
|
-
|
784
|
-
# Updates a dataset.
|
785
|
-
# This method supports patch semantics.
|
786
|
-
# @param [String] dataset_id
|
787
|
-
# The ID of the dataset to be updated.
|
788
|
-
# @param [Google::Apis::GenomicsV1::Dataset] dataset_object
|
789
|
-
# @param [String] update_mask
|
790
|
-
# An optional mask specifying which fields to update. At this time, the only
|
791
|
-
# mutable field is name. The only
|
792
|
-
# acceptable value is "name". If unspecified, all mutable fields will be
|
793
|
-
# updated.
|
794
|
-
# @param [String] fields
|
795
|
-
# Selector specifying which fields to include in a partial response.
|
796
|
-
# @param [String] quota_user
|
797
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
798
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
799
|
-
# @param [Google::Apis::RequestOptions] options
|
800
|
-
# Request-specific options
|
801
|
-
#
|
802
|
-
# @yield [result, err] Result & error if block supplied
|
803
|
-
# @yieldparam result [Google::Apis::GenomicsV1::Dataset] parsed result object
|
804
|
-
# @yieldparam err [StandardError] error object if request failed
|
805
|
-
#
|
806
|
-
# @return [Google::Apis::GenomicsV1::Dataset]
|
807
|
-
#
|
808
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
809
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
810
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
811
|
-
def patch_dataset(dataset_id, dataset_object = nil, update_mask: nil, fields: nil, quota_user: nil, options: nil, &block)
|
812
|
-
command = make_simple_command(:patch, 'v1/datasets/{datasetId}', options)
|
813
|
-
command.request_representation = Google::Apis::GenomicsV1::Dataset::Representation
|
814
|
-
command.request_object = dataset_object
|
815
|
-
command.response_representation = Google::Apis::GenomicsV1::Dataset::Representation
|
816
|
-
command.response_class = Google::Apis::GenomicsV1::Dataset
|
817
|
-
command.params['datasetId'] = dataset_id unless dataset_id.nil?
|
818
|
-
command.query['updateMask'] = update_mask unless update_mask.nil?
|
819
|
-
command.query['fields'] = fields unless fields.nil?
|
820
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
821
|
-
execute_or_queue_command(command, &block)
|
822
|
-
end
|
823
|
-
|
824
|
-
# Sets the access control policy on the specified dataset. Replaces any
|
825
|
-
# existing policy.
|
826
|
-
# See <a href="/iam/docs/managing-policies#setting_a_policy">Setting a
|
827
|
-
# Policy</a> for more information.
|
828
|
-
# @param [String] resource
|
829
|
-
# REQUIRED: The resource for which policy is being specified. Format is
|
830
|
-
# `datasets/<dataset ID>`.
|
831
|
-
# @param [Google::Apis::GenomicsV1::SetIamPolicyRequest] set_iam_policy_request_object
|
832
|
-
# @param [String] fields
|
833
|
-
# Selector specifying which fields to include in a partial response.
|
834
|
-
# @param [String] quota_user
|
835
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
836
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
837
|
-
# @param [Google::Apis::RequestOptions] options
|
838
|
-
# Request-specific options
|
839
|
-
#
|
840
|
-
# @yield [result, err] Result & error if block supplied
|
841
|
-
# @yieldparam result [Google::Apis::GenomicsV1::Policy] parsed result object
|
842
|
-
# @yieldparam err [StandardError] error object if request failed
|
843
|
-
#
|
844
|
-
# @return [Google::Apis::GenomicsV1::Policy]
|
845
|
-
#
|
846
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
847
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
848
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
849
|
-
def set_dataset_iam_policy(resource, set_iam_policy_request_object = nil, fields: nil, quota_user: nil, options: nil, &block)
|
850
|
-
command = make_simple_command(:post, 'v1/{+resource}:setIamPolicy', options)
|
851
|
-
command.request_representation = Google::Apis::GenomicsV1::SetIamPolicyRequest::Representation
|
852
|
-
command.request_object = set_iam_policy_request_object
|
853
|
-
command.response_representation = Google::Apis::GenomicsV1::Policy::Representation
|
854
|
-
command.response_class = Google::Apis::GenomicsV1::Policy
|
855
|
-
command.params['resource'] = resource unless resource.nil?
|
856
|
-
command.query['fields'] = fields unless fields.nil?
|
857
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
858
|
-
execute_or_queue_command(command, &block)
|
859
|
-
end
|
860
|
-
|
861
|
-
# Returns permissions that a caller has on the specified resource.
|
862
|
-
# See <a href="/iam/docs/managing-policies#testing_permissions">Testing
|
863
|
-
# Permissions</a> for more information.
|
864
|
-
# @param [String] resource
|
865
|
-
# REQUIRED: The resource for which policy is being specified. Format is
|
866
|
-
# `datasets/<dataset ID>`.
|
867
|
-
# @param [Google::Apis::GenomicsV1::TestIamPermissionsRequest] test_iam_permissions_request_object
|
868
|
-
# @param [String] fields
|
869
|
-
# Selector specifying which fields to include in a partial response.
|
870
|
-
# @param [String] quota_user
|
871
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
872
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
873
|
-
# @param [Google::Apis::RequestOptions] options
|
874
|
-
# Request-specific options
|
875
|
-
#
|
876
|
-
# @yield [result, err] Result & error if block supplied
|
877
|
-
# @yieldparam result [Google::Apis::GenomicsV1::TestIamPermissionsResponse] parsed result object
|
878
|
-
# @yieldparam err [StandardError] error object if request failed
|
879
|
-
#
|
880
|
-
# @return [Google::Apis::GenomicsV1::TestIamPermissionsResponse]
|
881
|
-
#
|
882
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
883
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
884
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
885
|
-
def test_dataset_iam_permissions(resource, test_iam_permissions_request_object = nil, fields: nil, quota_user: nil, options: nil, &block)
|
886
|
-
command = make_simple_command(:post, 'v1/{+resource}:testIamPermissions', options)
|
887
|
-
command.request_representation = Google::Apis::GenomicsV1::TestIamPermissionsRequest::Representation
|
888
|
-
command.request_object = test_iam_permissions_request_object
|
889
|
-
command.response_representation = Google::Apis::GenomicsV1::TestIamPermissionsResponse::Representation
|
890
|
-
command.response_class = Google::Apis::GenomicsV1::TestIamPermissionsResponse
|
891
|
-
command.params['resource'] = resource unless resource.nil?
|
892
|
-
command.query['fields'] = fields unless fields.nil?
|
893
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
894
|
-
execute_or_queue_command(command, &block)
|
895
|
-
end
|
896
|
-
|
897
|
-
# Undeletes a dataset by restoring a dataset which was deleted via this API.
|
898
|
-
# This operation is only possible for a week after the deletion occurred.
|
899
|
-
# @param [String] dataset_id
|
900
|
-
# The ID of the dataset to be undeleted.
|
901
|
-
# @param [Google::Apis::GenomicsV1::UndeleteDatasetRequest] undelete_dataset_request_object
|
902
|
-
# @param [String] fields
|
903
|
-
# Selector specifying which fields to include in a partial response.
|
904
|
-
# @param [String] quota_user
|
905
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
906
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
907
|
-
# @param [Google::Apis::RequestOptions] options
|
908
|
-
# Request-specific options
|
909
|
-
#
|
910
|
-
# @yield [result, err] Result & error if block supplied
|
911
|
-
# @yieldparam result [Google::Apis::GenomicsV1::Dataset] parsed result object
|
912
|
-
# @yieldparam err [StandardError] error object if request failed
|
913
|
-
#
|
914
|
-
# @return [Google::Apis::GenomicsV1::Dataset]
|
915
|
-
#
|
916
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
917
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
918
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
919
|
-
def undelete_dataset(dataset_id, undelete_dataset_request_object = nil, fields: nil, quota_user: nil, options: nil, &block)
|
920
|
-
command = make_simple_command(:post, 'v1/datasets/{datasetId}:undelete', options)
|
921
|
-
command.request_representation = Google::Apis::GenomicsV1::UndeleteDatasetRequest::Representation
|
922
|
-
command.request_object = undelete_dataset_request_object
|
923
|
-
command.response_representation = Google::Apis::GenomicsV1::Dataset::Representation
|
924
|
-
command.response_class = Google::Apis::GenomicsV1::Dataset
|
925
|
-
command.params['datasetId'] = dataset_id unless dataset_id.nil?
|
926
|
-
command.query['fields'] = fields unless fields.nil?
|
927
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
928
|
-
execute_or_queue_command(command, &block)
|
929
|
-
end
|
930
|
-
|
931
|
-
# Starts asynchronous cancellation on a long-running operation.
|
932
|
-
# The server makes a best effort to cancel the operation, but success is not
|
933
|
-
# guaranteed. Clients may use Operations.GetOperation
|
934
|
-
# or Operations.ListOperations
|
935
|
-
# to check whether the cancellation succeeded or the operation completed
|
936
|
-
# despite cancellation.
|
937
|
-
# Authorization requires the following [Google IAM](https://cloud.google.com/iam)
|
938
|
-
# permission:
|
939
|
-
# * `genomics.operations.cancel`
|
940
|
-
# @param [String] name
|
941
|
-
# The name of the operation resource to be cancelled.
|
942
|
-
# @param [Google::Apis::GenomicsV1::CancelOperationRequest] cancel_operation_request_object
|
943
|
-
# @param [String] fields
|
944
|
-
# Selector specifying which fields to include in a partial response.
|
945
|
-
# @param [String] quota_user
|
946
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
947
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
948
|
-
# @param [Google::Apis::RequestOptions] options
|
949
|
-
# Request-specific options
|
950
|
-
#
|
951
|
-
# @yield [result, err] Result & error if block supplied
|
952
|
-
# @yieldparam result [Google::Apis::GenomicsV1::Empty] parsed result object
|
953
|
-
# @yieldparam err [StandardError] error object if request failed
|
954
|
-
#
|
955
|
-
# @return [Google::Apis::GenomicsV1::Empty]
|
956
|
-
#
|
957
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
958
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
959
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
960
|
-
def cancel_operation(name, cancel_operation_request_object = nil, fields: nil, quota_user: nil, options: nil, &block)
|
961
|
-
command = make_simple_command(:post, 'v1/{+name}:cancel', options)
|
962
|
-
command.request_representation = Google::Apis::GenomicsV1::CancelOperationRequest::Representation
|
963
|
-
command.request_object = cancel_operation_request_object
|
964
|
-
command.response_representation = Google::Apis::GenomicsV1::Empty::Representation
|
965
|
-
command.response_class = Google::Apis::GenomicsV1::Empty
|
966
|
-
command.params['name'] = name unless name.nil?
|
967
|
-
command.query['fields'] = fields unless fields.nil?
|
968
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
969
|
-
execute_or_queue_command(command, &block)
|
970
|
-
end
|
971
|
-
|
972
|
-
# Gets the latest state of a long-running operation.
|
973
|
-
# Clients can use this method to poll the operation result at intervals as
|
974
|
-
# recommended by the API service.
|
975
|
-
# Authorization requires the following [Google IAM](https://cloud.google.com/iam)
|
976
|
-
# permission:
|
977
|
-
# * `genomics.operations.get`
|
978
|
-
# @param [String] name
|
979
|
-
# The name of the operation resource.
|
980
|
-
# @param [String] fields
|
981
|
-
# Selector specifying which fields to include in a partial response.
|
982
|
-
# @param [String] quota_user
|
983
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
984
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
985
|
-
# @param [Google::Apis::RequestOptions] options
|
986
|
-
# Request-specific options
|
987
|
-
#
|
988
|
-
# @yield [result, err] Result & error if block supplied
|
989
|
-
# @yieldparam result [Google::Apis::GenomicsV1::Operation] parsed result object
|
990
|
-
# @yieldparam err [StandardError] error object if request failed
|
991
|
-
#
|
992
|
-
# @return [Google::Apis::GenomicsV1::Operation]
|
993
|
-
#
|
994
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
995
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
996
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
997
|
-
def get_operation(name, fields: nil, quota_user: nil, options: nil, &block)
|
998
|
-
command = make_simple_command(:get, 'v1/{+name}', options)
|
999
|
-
command.response_representation = Google::Apis::GenomicsV1::Operation::Representation
|
1000
|
-
command.response_class = Google::Apis::GenomicsV1::Operation
|
1001
|
-
command.params['name'] = name unless name.nil?
|
1002
|
-
command.query['fields'] = fields unless fields.nil?
|
1003
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1004
|
-
execute_or_queue_command(command, &block)
|
1005
|
-
end
|
1006
|
-
|
1007
|
-
# Lists operations that match the specified filter in the request.
|
1008
|
-
# Authorization requires the following [Google IAM](https://cloud.google.com/iam)
|
1009
|
-
# permission:
|
1010
|
-
# * `genomics.operations.list`
|
1011
|
-
# @param [String] name
|
1012
|
-
# The name of the operation's parent resource.
|
1013
|
-
# @param [String] filter
|
1014
|
-
# A string for filtering Operations.
|
1015
|
-
# In v2alpha1, the following filter fields are supported:
|
1016
|
-
# * createTime: The time this job was created
|
1017
|
-
# * events: The set of event (names) that have occurred while running
|
1018
|
-
# the pipeline. The : operator can be used to determine if a
|
1019
|
-
# particular event has occurred.
|
1020
|
-
# * error: If the pipeline is running, this value is NULL. Once the
|
1021
|
-
# pipeline finishes, the value is the standard Google error code.
|
1022
|
-
# * labels.key or labels."key with space" where key is a label key.
|
1023
|
-
# * done: If the pipeline is running, this value is false. Once the
|
1024
|
-
# pipeline finishes, the value is true.
|
1025
|
-
# In v1 and v1alpha2, the following filter fields are supported:
|
1026
|
-
# * projectId: Required. Corresponds to
|
1027
|
-
# OperationMetadata.projectId.
|
1028
|
-
# * createTime: The time this job was created, in seconds from the
|
1029
|
-
# [epoch](http://en.wikipedia.org/wiki/Unix_time). Can use `>=` and/or `<=`
|
1030
|
-
# operators.
|
1031
|
-
# * status: Can be `RUNNING`, `SUCCESS`, `FAILURE`, or `CANCELED`. Only
|
1032
|
-
# one status may be specified.
|
1033
|
-
# * labels.key where key is a label key.
|
1034
|
-
# Examples:
|
1035
|
-
# * `projectId = my-project AND createTime >= 1432140000`
|
1036
|
-
# * `projectId = my-project AND createTime >= 1432140000 AND createTime <=
|
1037
|
-
# 1432150000 AND status = RUNNING`
|
1038
|
-
# * `projectId = my-project AND labels.color = *`
|
1039
|
-
# * `projectId = my-project AND labels.color = red`
|
1040
|
-
# @param [Fixnum] page_size
|
1041
|
-
# The maximum number of results to return. If unspecified, defaults to
|
1042
|
-
# 256. The maximum value is 2048.
|
1043
|
-
# @param [String] page_token
|
1044
|
-
# The standard list page token.
|
1045
|
-
# @param [String] fields
|
1046
|
-
# Selector specifying which fields to include in a partial response.
|
1047
|
-
# @param [String] quota_user
|
1048
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
1049
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
1050
|
-
# @param [Google::Apis::RequestOptions] options
|
1051
|
-
# Request-specific options
|
1052
|
-
#
|
1053
|
-
# @yield [result, err] Result & error if block supplied
|
1054
|
-
# @yieldparam result [Google::Apis::GenomicsV1::ListOperationsResponse] parsed result object
|
1055
|
-
# @yieldparam err [StandardError] error object if request failed
|
1056
|
-
#
|
1057
|
-
# @return [Google::Apis::GenomicsV1::ListOperationsResponse]
|
1058
|
-
#
|
1059
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1060
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1061
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1062
|
-
def list_operations(name, filter: nil, page_size: nil, page_token: nil, fields: nil, quota_user: nil, options: nil, &block)
|
1063
|
-
command = make_simple_command(:get, 'v1/{+name}', options)
|
1064
|
-
command.response_representation = Google::Apis::GenomicsV1::ListOperationsResponse::Representation
|
1065
|
-
command.response_class = Google::Apis::GenomicsV1::ListOperationsResponse
|
1066
|
-
command.params['name'] = name unless name.nil?
|
1067
|
-
command.query['filter'] = filter unless filter.nil?
|
1068
|
-
command.query['pageSize'] = page_size unless page_size.nil?
|
1069
|
-
command.query['pageToken'] = page_token unless page_token.nil?
|
1070
|
-
command.query['fields'] = fields unless fields.nil?
|
1071
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1072
|
-
execute_or_queue_command(command, &block)
|
1073
|
-
end
|
1074
|
-
|
1075
|
-
# Deletes a read group set.
|
1076
|
-
# @param [String] read_group_set_id
|
1077
|
-
# The ID of the read group set to be deleted. The caller must have WRITE
|
1078
|
-
# permissions to the dataset associated with this read group set.
|
1079
|
-
# @param [String] fields
|
1080
|
-
# Selector specifying which fields to include in a partial response.
|
1081
|
-
# @param [String] quota_user
|
1082
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
1083
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
1084
|
-
# @param [Google::Apis::RequestOptions] options
|
1085
|
-
# Request-specific options
|
1086
|
-
#
|
1087
|
-
# @yield [result, err] Result & error if block supplied
|
1088
|
-
# @yieldparam result [Google::Apis::GenomicsV1::Empty] parsed result object
|
1089
|
-
# @yieldparam err [StandardError] error object if request failed
|
1090
|
-
#
|
1091
|
-
# @return [Google::Apis::GenomicsV1::Empty]
|
1092
|
-
#
|
1093
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1094
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1095
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1096
|
-
def delete_read_group_set(read_group_set_id, fields: nil, quota_user: nil, options: nil, &block)
|
1097
|
-
command = make_simple_command(:delete, 'v1/readgroupsets/{readGroupSetId}', options)
|
1098
|
-
command.response_representation = Google::Apis::GenomicsV1::Empty::Representation
|
1099
|
-
command.response_class = Google::Apis::GenomicsV1::Empty
|
1100
|
-
command.params['readGroupSetId'] = read_group_set_id unless read_group_set_id.nil?
|
1101
|
-
command.query['fields'] = fields unless fields.nil?
|
1102
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1103
|
-
execute_or_queue_command(command, &block)
|
1104
|
-
end
|
1105
|
-
|
1106
|
-
# Exports a read group set to a BAM file in Google Cloud Storage.
|
1107
|
-
# Note that currently there may be some differences between exported BAM
|
1108
|
-
# files and the original BAM file at the time of import. See
|
1109
|
-
# ImportReadGroupSets
|
1110
|
-
# for caveats.
|
1111
|
-
# @param [String] read_group_set_id
|
1112
|
-
# Required. The ID of the read group set to export. The caller must have
|
1113
|
-
# READ access to this read group set.
|
1114
|
-
# @param [Google::Apis::GenomicsV1::ExportReadGroupSetRequest] export_read_group_set_request_object
|
1115
|
-
# @param [String] fields
|
1116
|
-
# Selector specifying which fields to include in a partial response.
|
1117
|
-
# @param [String] quota_user
|
1118
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
1119
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
1120
|
-
# @param [Google::Apis::RequestOptions] options
|
1121
|
-
# Request-specific options
|
1122
|
-
#
|
1123
|
-
# @yield [result, err] Result & error if block supplied
|
1124
|
-
# @yieldparam result [Google::Apis::GenomicsV1::Operation] parsed result object
|
1125
|
-
# @yieldparam err [StandardError] error object if request failed
|
1126
|
-
#
|
1127
|
-
# @return [Google::Apis::GenomicsV1::Operation]
|
1128
|
-
#
|
1129
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1130
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1131
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1132
|
-
def export_read_group_sets(read_group_set_id, export_read_group_set_request_object = nil, fields: nil, quota_user: nil, options: nil, &block)
|
1133
|
-
command = make_simple_command(:post, 'v1/readgroupsets/{readGroupSetId}:export', options)
|
1134
|
-
command.request_representation = Google::Apis::GenomicsV1::ExportReadGroupSetRequest::Representation
|
1135
|
-
command.request_object = export_read_group_set_request_object
|
1136
|
-
command.response_representation = Google::Apis::GenomicsV1::Operation::Representation
|
1137
|
-
command.response_class = Google::Apis::GenomicsV1::Operation
|
1138
|
-
command.params['readGroupSetId'] = read_group_set_id unless read_group_set_id.nil?
|
1139
|
-
command.query['fields'] = fields unless fields.nil?
|
1140
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1141
|
-
execute_or_queue_command(command, &block)
|
1142
|
-
end
|
1143
|
-
|
1144
|
-
# Gets a read group set by ID.
|
1145
|
-
# @param [String] read_group_set_id
|
1146
|
-
# The ID of the read group set.
|
1147
|
-
# @param [String] fields
|
1148
|
-
# Selector specifying which fields to include in a partial response.
|
1149
|
-
# @param [String] quota_user
|
1150
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
1151
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
1152
|
-
# @param [Google::Apis::RequestOptions] options
|
1153
|
-
# Request-specific options
|
1154
|
-
#
|
1155
|
-
# @yield [result, err] Result & error if block supplied
|
1156
|
-
# @yieldparam result [Google::Apis::GenomicsV1::ReadGroupSet] parsed result object
|
1157
|
-
# @yieldparam err [StandardError] error object if request failed
|
1158
|
-
#
|
1159
|
-
# @return [Google::Apis::GenomicsV1::ReadGroupSet]
|
1160
|
-
#
|
1161
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1162
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1163
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1164
|
-
def get_read_group_set(read_group_set_id, fields: nil, quota_user: nil, options: nil, &block)
|
1165
|
-
command = make_simple_command(:get, 'v1/readgroupsets/{readGroupSetId}', options)
|
1166
|
-
command.response_representation = Google::Apis::GenomicsV1::ReadGroupSet::Representation
|
1167
|
-
command.response_class = Google::Apis::GenomicsV1::ReadGroupSet
|
1168
|
-
command.params['readGroupSetId'] = read_group_set_id unless read_group_set_id.nil?
|
1169
|
-
command.query['fields'] = fields unless fields.nil?
|
1170
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1171
|
-
execute_or_queue_command(command, &block)
|
1172
|
-
end
|
1173
|
-
|
1174
|
-
# Creates read group sets by asynchronously importing the provided
|
1175
|
-
# information.
|
1176
|
-
# The caller must have WRITE permissions to the dataset.
|
1177
|
-
# ## Notes on [BAM](https://samtools.github.io/hts-specs/SAMv1.pdf) import
|
1178
|
-
# - Tags will be converted to strings - tag types are not preserved
|
1179
|
-
# - Comments (`@CO`) in the input file header will not be preserved
|
1180
|
-
# - Original header order of references (`@SQ`) will not be preserved
|
1181
|
-
# - Any reverse stranded unmapped reads will be reverse complemented, and
|
1182
|
-
# their qualities (also the "BQ" and "OQ" tags, if any) will be reversed
|
1183
|
-
# - Unmapped reads will be stripped of positional information (reference name
|
1184
|
-
# and position)
|
1185
|
-
# @param [Google::Apis::GenomicsV1::ImportReadGroupSetsRequest] import_read_group_sets_request_object
|
1186
|
-
# @param [String] fields
|
1187
|
-
# Selector specifying which fields to include in a partial response.
|
1188
|
-
# @param [String] quota_user
|
1189
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
1190
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
1191
|
-
# @param [Google::Apis::RequestOptions] options
|
1192
|
-
# Request-specific options
|
1193
|
-
#
|
1194
|
-
# @yield [result, err] Result & error if block supplied
|
1195
|
-
# @yieldparam result [Google::Apis::GenomicsV1::Operation] parsed result object
|
1196
|
-
# @yieldparam err [StandardError] error object if request failed
|
1197
|
-
#
|
1198
|
-
# @return [Google::Apis::GenomicsV1::Operation]
|
1199
|
-
#
|
1200
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1201
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1202
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1203
|
-
def import_read_group_sets(import_read_group_sets_request_object = nil, fields: nil, quota_user: nil, options: nil, &block)
|
1204
|
-
command = make_simple_command(:post, 'v1/readgroupsets:import', options)
|
1205
|
-
command.request_representation = Google::Apis::GenomicsV1::ImportReadGroupSetsRequest::Representation
|
1206
|
-
command.request_object = import_read_group_sets_request_object
|
1207
|
-
command.response_representation = Google::Apis::GenomicsV1::Operation::Representation
|
1208
|
-
command.response_class = Google::Apis::GenomicsV1::Operation
|
1209
|
-
command.query['fields'] = fields unless fields.nil?
|
1210
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1211
|
-
execute_or_queue_command(command, &block)
|
1212
|
-
end
|
1213
|
-
|
1214
|
-
# Updates a read group set.
|
1215
|
-
# This method supports patch semantics.
|
1216
|
-
# @param [String] read_group_set_id
|
1217
|
-
# The ID of the read group set to be updated. The caller must have WRITE
|
1218
|
-
# permissions to the dataset associated with this read group set.
|
1219
|
-
# @param [Google::Apis::GenomicsV1::ReadGroupSet] read_group_set_object
|
1220
|
-
# @param [String] update_mask
|
1221
|
-
# An optional mask specifying which fields to update. Supported fields:
|
1222
|
-
# * name.
|
1223
|
-
# * referenceSetId.
|
1224
|
-
# Leaving `updateMask` unset is equivalent to specifying all mutable
|
1225
|
-
# fields.
|
1226
|
-
# @param [String] fields
|
1227
|
-
# Selector specifying which fields to include in a partial response.
|
1228
|
-
# @param [String] quota_user
|
1229
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
1230
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
1231
|
-
# @param [Google::Apis::RequestOptions] options
|
1232
|
-
# Request-specific options
|
1233
|
-
#
|
1234
|
-
# @yield [result, err] Result & error if block supplied
|
1235
|
-
# @yieldparam result [Google::Apis::GenomicsV1::ReadGroupSet] parsed result object
|
1236
|
-
# @yieldparam err [StandardError] error object if request failed
|
1237
|
-
#
|
1238
|
-
# @return [Google::Apis::GenomicsV1::ReadGroupSet]
|
1239
|
-
#
|
1240
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1241
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1242
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1243
|
-
def patch_read_group_set(read_group_set_id, read_group_set_object = nil, update_mask: nil, fields: nil, quota_user: nil, options: nil, &block)
|
1244
|
-
command = make_simple_command(:patch, 'v1/readgroupsets/{readGroupSetId}', options)
|
1245
|
-
command.request_representation = Google::Apis::GenomicsV1::ReadGroupSet::Representation
|
1246
|
-
command.request_object = read_group_set_object
|
1247
|
-
command.response_representation = Google::Apis::GenomicsV1::ReadGroupSet::Representation
|
1248
|
-
command.response_class = Google::Apis::GenomicsV1::ReadGroupSet
|
1249
|
-
command.params['readGroupSetId'] = read_group_set_id unless read_group_set_id.nil?
|
1250
|
-
command.query['updateMask'] = update_mask unless update_mask.nil?
|
1251
|
-
command.query['fields'] = fields unless fields.nil?
|
1252
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1253
|
-
execute_or_queue_command(command, &block)
|
1254
|
-
end
|
1255
|
-
|
1256
|
-
# Searches for read group sets matching the criteria.
|
1257
|
-
# Implements
|
1258
|
-
# [GlobalAllianceApi.searchReadGroupSets](https://github.com/ga4gh/schemas/blob/
|
1259
|
-
# v0.5.1/src/main/resources/avro/readmethods.avdl#L135).
|
1260
|
-
# @param [Google::Apis::GenomicsV1::SearchReadGroupSetsRequest] search_read_group_sets_request_object
|
1261
|
-
# @param [String] fields
|
1262
|
-
# Selector specifying which fields to include in a partial response.
|
1263
|
-
# @param [String] quota_user
|
1264
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
1265
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
1266
|
-
# @param [Google::Apis::RequestOptions] options
|
1267
|
-
# Request-specific options
|
1268
|
-
#
|
1269
|
-
# @yield [result, err] Result & error if block supplied
|
1270
|
-
# @yieldparam result [Google::Apis::GenomicsV1::SearchReadGroupSetsResponse] parsed result object
|
1271
|
-
# @yieldparam err [StandardError] error object if request failed
|
1272
|
-
#
|
1273
|
-
# @return [Google::Apis::GenomicsV1::SearchReadGroupSetsResponse]
|
1274
|
-
#
|
1275
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1276
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1277
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1278
|
-
def search_read_group_sets(search_read_group_sets_request_object = nil, fields: nil, quota_user: nil, options: nil, &block)
|
1279
|
-
command = make_simple_command(:post, 'v1/readgroupsets/search', options)
|
1280
|
-
command.request_representation = Google::Apis::GenomicsV1::SearchReadGroupSetsRequest::Representation
|
1281
|
-
command.request_object = search_read_group_sets_request_object
|
1282
|
-
command.response_representation = Google::Apis::GenomicsV1::SearchReadGroupSetsResponse::Representation
|
1283
|
-
command.response_class = Google::Apis::GenomicsV1::SearchReadGroupSetsResponse
|
1284
|
-
command.query['fields'] = fields unless fields.nil?
|
1285
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1286
|
-
execute_or_queue_command(command, &block)
|
1287
|
-
end
|
1288
|
-
|
1289
|
-
# Lists fixed width coverage buckets for a read group set, each of which
|
1290
|
-
# correspond to a range of a reference sequence. Each bucket summarizes
|
1291
|
-
# coverage information across its corresponding genomic range.
|
1292
|
-
# Coverage is defined as the number of reads which are aligned to a given
|
1293
|
-
# base in the reference sequence. Coverage buckets are available at several
|
1294
|
-
# precomputed bucket widths, enabling retrieval of various coverage 'zoom
|
1295
|
-
# levels'. The caller must have READ permissions for the target read group
|
1296
|
-
# set.
|
1297
|
-
# @param [String] read_group_set_id
|
1298
|
-
# Required. The ID of the read group set over which coverage is requested.
|
1299
|
-
# @param [Fixnum] end_
|
1300
|
-
# The end position of the range on the reference, 0-based exclusive. If
|
1301
|
-
# specified, `referenceName` must also be specified. If unset or 0, defaults
|
1302
|
-
# to the length of the reference.
|
1303
|
-
# @param [Fixnum] page_size
|
1304
|
-
# The maximum number of results to return in a single page. If unspecified,
|
1305
|
-
# defaults to 1024. The maximum value is 2048.
|
1306
|
-
# @param [String] page_token
|
1307
|
-
# The continuation token, which is used to page through large result sets.
|
1308
|
-
# To get the next page of results, set this parameter to the value of
|
1309
|
-
# `nextPageToken` from the previous response.
|
1310
|
-
# @param [String] reference_name
|
1311
|
-
# The name of the reference to query, within the reference set associated
|
1312
|
-
# with this query. Optional.
|
1313
|
-
# @param [Fixnum] start
|
1314
|
-
# The start position of the range on the reference, 0-based inclusive. If
|
1315
|
-
# specified, `referenceName` must also be specified. Defaults to 0.
|
1316
|
-
# @param [Fixnum] target_bucket_width
|
1317
|
-
# The desired width of each reported coverage bucket in base pairs. This
|
1318
|
-
# will be rounded down to the nearest precomputed bucket width; the value
|
1319
|
-
# of which is returned as `bucketWidth` in the response. Defaults
|
1320
|
-
# to infinity (each bucket spans an entire reference sequence) or the length
|
1321
|
-
# of the target range, if specified. The smallest precomputed
|
1322
|
-
# `bucketWidth` is currently 2048 base pairs; this is subject to
|
1323
|
-
# change.
|
1324
|
-
# @param [String] fields
|
1325
|
-
# Selector specifying which fields to include in a partial response.
|
1326
|
-
# @param [String] quota_user
|
1327
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
1328
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
1329
|
-
# @param [Google::Apis::RequestOptions] options
|
1330
|
-
# Request-specific options
|
1331
|
-
#
|
1332
|
-
# @yield [result, err] Result & error if block supplied
|
1333
|
-
# @yieldparam result [Google::Apis::GenomicsV1::ListCoverageBucketsResponse] parsed result object
|
1334
|
-
# @yieldparam err [StandardError] error object if request failed
|
1335
|
-
#
|
1336
|
-
# @return [Google::Apis::GenomicsV1::ListCoverageBucketsResponse]
|
1337
|
-
#
|
1338
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1339
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1340
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1341
|
-
def list_coverage_buckets(read_group_set_id, end_: nil, page_size: nil, page_token: nil, reference_name: nil, start: nil, target_bucket_width: nil, fields: nil, quota_user: nil, options: nil, &block)
|
1342
|
-
command = make_simple_command(:get, 'v1/readgroupsets/{readGroupSetId}/coveragebuckets', options)
|
1343
|
-
command.response_representation = Google::Apis::GenomicsV1::ListCoverageBucketsResponse::Representation
|
1344
|
-
command.response_class = Google::Apis::GenomicsV1::ListCoverageBucketsResponse
|
1345
|
-
command.params['readGroupSetId'] = read_group_set_id unless read_group_set_id.nil?
|
1346
|
-
command.query['end'] = end_ unless end_.nil?
|
1347
|
-
command.query['pageSize'] = page_size unless page_size.nil?
|
1348
|
-
command.query['pageToken'] = page_token unless page_token.nil?
|
1349
|
-
command.query['referenceName'] = reference_name unless reference_name.nil?
|
1350
|
-
command.query['start'] = start unless start.nil?
|
1351
|
-
command.query['targetBucketWidth'] = target_bucket_width unless target_bucket_width.nil?
|
1352
|
-
command.query['fields'] = fields unless fields.nil?
|
1353
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1354
|
-
execute_or_queue_command(command, &block)
|
1355
|
-
end
|
1356
|
-
|
1357
|
-
# Gets a list of reads for one or more read group sets.
|
1358
|
-
# Reads search operates over a genomic coordinate space of reference sequence
|
1359
|
-
# & position defined over the reference sequences to which the requested
|
1360
|
-
# read group sets are aligned.
|
1361
|
-
# If a target positional range is specified, search returns all reads whose
|
1362
|
-
# alignment to the reference genome overlap the range. A query which
|
1363
|
-
# specifies only read group set IDs yields all reads in those read group
|
1364
|
-
# sets, including unmapped reads.
|
1365
|
-
# All reads returned (including reads on subsequent pages) are ordered by
|
1366
|
-
# genomic coordinate (by reference sequence, then position). Reads with
|
1367
|
-
# equivalent genomic coordinates are returned in an unspecified order. This
|
1368
|
-
# order is consistent, such that two queries for the same content (regardless
|
1369
|
-
# of page size) yield reads in the same order across their respective streams
|
1370
|
-
# of paginated responses.
|
1371
|
-
# Implements
|
1372
|
-
# [GlobalAllianceApi.searchReads](https://github.com/ga4gh/schemas/blob/v0.5.1/
|
1373
|
-
# src/main/resources/avro/readmethods.avdl#L85).
|
1374
|
-
# @param [Google::Apis::GenomicsV1::SearchReadsRequest] search_reads_request_object
|
1375
|
-
# @param [String] fields
|
1376
|
-
# Selector specifying which fields to include in a partial response.
|
1377
|
-
# @param [String] quota_user
|
1378
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
1379
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
1380
|
-
# @param [Google::Apis::RequestOptions] options
|
1381
|
-
# Request-specific options
|
1382
|
-
#
|
1383
|
-
# @yield [result, err] Result & error if block supplied
|
1384
|
-
# @yieldparam result [Google::Apis::GenomicsV1::SearchReadsResponse] parsed result object
|
1385
|
-
# @yieldparam err [StandardError] error object if request failed
|
1386
|
-
#
|
1387
|
-
# @return [Google::Apis::GenomicsV1::SearchReadsResponse]
|
1388
|
-
#
|
1389
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1390
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1391
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1392
|
-
def search_reads(search_reads_request_object = nil, fields: nil, quota_user: nil, options: nil, &block)
|
1393
|
-
command = make_simple_command(:post, 'v1/reads/search', options)
|
1394
|
-
command.request_representation = Google::Apis::GenomicsV1::SearchReadsRequest::Representation
|
1395
|
-
command.request_object = search_reads_request_object
|
1396
|
-
command.response_representation = Google::Apis::GenomicsV1::SearchReadsResponse::Representation
|
1397
|
-
command.response_class = Google::Apis::GenomicsV1::SearchReadsResponse
|
1398
|
-
command.query['fields'] = fields unless fields.nil?
|
1399
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1400
|
-
execute_or_queue_command(command, &block)
|
1401
|
-
end
|
1402
|
-
|
1403
|
-
# Gets a reference.
|
1404
|
-
# Implements
|
1405
|
-
# [GlobalAllianceApi.getReference](https://github.com/ga4gh/schemas/blob/v0.5.1/
|
1406
|
-
# src/main/resources/avro/referencemethods.avdl#L158).
|
1407
|
-
# @param [String] reference_id
|
1408
|
-
# The ID of the reference.
|
1409
|
-
# @param [String] fields
|
1410
|
-
# Selector specifying which fields to include in a partial response.
|
1411
|
-
# @param [String] quota_user
|
1412
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
1413
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
1414
|
-
# @param [Google::Apis::RequestOptions] options
|
1415
|
-
# Request-specific options
|
1416
|
-
#
|
1417
|
-
# @yield [result, err] Result & error if block supplied
|
1418
|
-
# @yieldparam result [Google::Apis::GenomicsV1::Reference] parsed result object
|
1419
|
-
# @yieldparam err [StandardError] error object if request failed
|
1420
|
-
#
|
1421
|
-
# @return [Google::Apis::GenomicsV1::Reference]
|
1422
|
-
#
|
1423
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1424
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1425
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1426
|
-
def get_reference(reference_id, fields: nil, quota_user: nil, options: nil, &block)
|
1427
|
-
command = make_simple_command(:get, 'v1/references/{referenceId}', options)
|
1428
|
-
command.response_representation = Google::Apis::GenomicsV1::Reference::Representation
|
1429
|
-
command.response_class = Google::Apis::GenomicsV1::Reference
|
1430
|
-
command.params['referenceId'] = reference_id unless reference_id.nil?
|
1431
|
-
command.query['fields'] = fields unless fields.nil?
|
1432
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1433
|
-
execute_or_queue_command(command, &block)
|
1434
|
-
end
|
1435
|
-
|
1436
|
-
# Searches for references which match the given criteria.
|
1437
|
-
# Implements
|
1438
|
-
# [GlobalAllianceApi.searchReferences](https://github.com/ga4gh/schemas/blob/v0.
|
1439
|
-
# 5.1/src/main/resources/avro/referencemethods.avdl#L146).
|
1440
|
-
# @param [Google::Apis::GenomicsV1::SearchReferencesRequest] search_references_request_object
|
1441
|
-
# @param [String] fields
|
1442
|
-
# Selector specifying which fields to include in a partial response.
|
1443
|
-
# @param [String] quota_user
|
1444
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
1445
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
1446
|
-
# @param [Google::Apis::RequestOptions] options
|
1447
|
-
# Request-specific options
|
1448
|
-
#
|
1449
|
-
# @yield [result, err] Result & error if block supplied
|
1450
|
-
# @yieldparam result [Google::Apis::GenomicsV1::SearchReferencesResponse] parsed result object
|
1451
|
-
# @yieldparam err [StandardError] error object if request failed
|
1452
|
-
#
|
1453
|
-
# @return [Google::Apis::GenomicsV1::SearchReferencesResponse]
|
1454
|
-
#
|
1455
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1456
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1457
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1458
|
-
def search_references(search_references_request_object = nil, fields: nil, quota_user: nil, options: nil, &block)
|
1459
|
-
command = make_simple_command(:post, 'v1/references/search', options)
|
1460
|
-
command.request_representation = Google::Apis::GenomicsV1::SearchReferencesRequest::Representation
|
1461
|
-
command.request_object = search_references_request_object
|
1462
|
-
command.response_representation = Google::Apis::GenomicsV1::SearchReferencesResponse::Representation
|
1463
|
-
command.response_class = Google::Apis::GenomicsV1::SearchReferencesResponse
|
1464
|
-
command.query['fields'] = fields unless fields.nil?
|
1465
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1466
|
-
execute_or_queue_command(command, &block)
|
1467
|
-
end
|
1468
|
-
|
1469
|
-
# Lists the bases in a reference, optionally restricted to a range.
|
1470
|
-
# Implements
|
1471
|
-
# [GlobalAllianceApi.getReferenceBases](https://github.com/ga4gh/schemas/blob/v0.
|
1472
|
-
# 5.1/src/main/resources/avro/referencemethods.avdl#L221).
|
1473
|
-
# @param [String] reference_id
|
1474
|
-
# The ID of the reference.
|
1475
|
-
# @param [Fixnum] end_position
|
1476
|
-
# The end position (0-based, exclusive) of this query. Defaults to the length
|
1477
|
-
# of this reference.
|
1478
|
-
# @param [Fixnum] page_size
|
1479
|
-
# The maximum number of bases to return in a single page. If unspecified,
|
1480
|
-
# defaults to 200Kbp (kilo base pairs). The maximum value is 10Mbp (mega base
|
1481
|
-
# pairs).
|
1482
|
-
# @param [String] page_token
|
1483
|
-
# The continuation token, which is used to page through large result sets.
|
1484
|
-
# To get the next page of results, set this parameter to the value of
|
1485
|
-
# `nextPageToken` from the previous response.
|
1486
|
-
# @param [Fixnum] start_position
|
1487
|
-
# The start position (0-based) of this query. Defaults to 0.
|
1488
|
-
# @param [String] fields
|
1489
|
-
# Selector specifying which fields to include in a partial response.
|
1490
|
-
# @param [String] quota_user
|
1491
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
1492
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
1493
|
-
# @param [Google::Apis::RequestOptions] options
|
1494
|
-
# Request-specific options
|
1495
|
-
#
|
1496
|
-
# @yield [result, err] Result & error if block supplied
|
1497
|
-
# @yieldparam result [Google::Apis::GenomicsV1::ListBasesResponse] parsed result object
|
1498
|
-
# @yieldparam err [StandardError] error object if request failed
|
1499
|
-
#
|
1500
|
-
# @return [Google::Apis::GenomicsV1::ListBasesResponse]
|
1501
|
-
#
|
1502
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1503
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1504
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1505
|
-
def list_reference_bases(reference_id, end_position: nil, page_size: nil, page_token: nil, start_position: nil, fields: nil, quota_user: nil, options: nil, &block)
|
1506
|
-
command = make_simple_command(:get, 'v1/references/{referenceId}/bases', options)
|
1507
|
-
command.response_representation = Google::Apis::GenomicsV1::ListBasesResponse::Representation
|
1508
|
-
command.response_class = Google::Apis::GenomicsV1::ListBasesResponse
|
1509
|
-
command.params['referenceId'] = reference_id unless reference_id.nil?
|
1510
|
-
command.query['end'] = end_position unless end_position.nil?
|
1511
|
-
command.query['pageSize'] = page_size unless page_size.nil?
|
1512
|
-
command.query['pageToken'] = page_token unless page_token.nil?
|
1513
|
-
command.query['start'] = start_position unless start_position.nil?
|
1514
|
-
command.query['fields'] = fields unless fields.nil?
|
1515
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1516
|
-
execute_or_queue_command(command, &block)
|
1517
|
-
end
|
1518
|
-
|
1519
|
-
# Gets a reference set.
|
1520
|
-
# Implements
|
1521
|
-
# [GlobalAllianceApi.getReferenceSet](https://github.com/ga4gh/schemas/blob/v0.5.
|
1522
|
-
# 1/src/main/resources/avro/referencemethods.avdl#L83).
|
1523
|
-
# @param [String] reference_set_id
|
1524
|
-
# The ID of the reference set.
|
1525
|
-
# @param [String] fields
|
1526
|
-
# Selector specifying which fields to include in a partial response.
|
1527
|
-
# @param [String] quota_user
|
1528
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
1529
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
1530
|
-
# @param [Google::Apis::RequestOptions] options
|
1531
|
-
# Request-specific options
|
1532
|
-
#
|
1533
|
-
# @yield [result, err] Result & error if block supplied
|
1534
|
-
# @yieldparam result [Google::Apis::GenomicsV1::ReferenceSet] parsed result object
|
1535
|
-
# @yieldparam err [StandardError] error object if request failed
|
1536
|
-
#
|
1537
|
-
# @return [Google::Apis::GenomicsV1::ReferenceSet]
|
1538
|
-
#
|
1539
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1540
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1541
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1542
|
-
def get_reference_set(reference_set_id, fields: nil, quota_user: nil, options: nil, &block)
|
1543
|
-
command = make_simple_command(:get, 'v1/referencesets/{referenceSetId}', options)
|
1544
|
-
command.response_representation = Google::Apis::GenomicsV1::ReferenceSet::Representation
|
1545
|
-
command.response_class = Google::Apis::GenomicsV1::ReferenceSet
|
1546
|
-
command.params['referenceSetId'] = reference_set_id unless reference_set_id.nil?
|
1547
|
-
command.query['fields'] = fields unless fields.nil?
|
1548
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1549
|
-
execute_or_queue_command(command, &block)
|
1550
|
-
end
|
1551
|
-
|
1552
|
-
# Searches for reference sets which match the given criteria.
|
1553
|
-
# Implements
|
1554
|
-
# [GlobalAllianceApi.searchReferenceSets](https://github.com/ga4gh/schemas/blob/
|
1555
|
-
# v0.5.1/src/main/resources/avro/referencemethods.avdl#L71)
|
1556
|
-
# @param [Google::Apis::GenomicsV1::SearchReferenceSetsRequest] search_reference_sets_request_object
|
1557
|
-
# @param [String] fields
|
1558
|
-
# Selector specifying which fields to include in a partial response.
|
1559
|
-
# @param [String] quota_user
|
1560
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
1561
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
1562
|
-
# @param [Google::Apis::RequestOptions] options
|
1563
|
-
# Request-specific options
|
1564
|
-
#
|
1565
|
-
# @yield [result, err] Result & error if block supplied
|
1566
|
-
# @yieldparam result [Google::Apis::GenomicsV1::SearchReferenceSetsResponse] parsed result object
|
1567
|
-
# @yieldparam err [StandardError] error object if request failed
|
1568
|
-
#
|
1569
|
-
# @return [Google::Apis::GenomicsV1::SearchReferenceSetsResponse]
|
1570
|
-
#
|
1571
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1572
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1573
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1574
|
-
def search_reference_sets(search_reference_sets_request_object = nil, fields: nil, quota_user: nil, options: nil, &block)
|
1575
|
-
command = make_simple_command(:post, 'v1/referencesets/search', options)
|
1576
|
-
command.request_representation = Google::Apis::GenomicsV1::SearchReferenceSetsRequest::Representation
|
1577
|
-
command.request_object = search_reference_sets_request_object
|
1578
|
-
command.response_representation = Google::Apis::GenomicsV1::SearchReferenceSetsResponse::Representation
|
1579
|
-
command.response_class = Google::Apis::GenomicsV1::SearchReferenceSetsResponse
|
1580
|
-
command.query['fields'] = fields unless fields.nil?
|
1581
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1582
|
-
execute_or_queue_command(command, &block)
|
1583
|
-
end
|
1584
|
-
|
1585
|
-
# Creates a new variant.
|
1586
|
-
# @param [Google::Apis::GenomicsV1::Variant] variant_object
|
1587
|
-
# @param [String] fields
|
1588
|
-
# Selector specifying which fields to include in a partial response.
|
1589
|
-
# @param [String] quota_user
|
1590
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
1591
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
1592
|
-
# @param [Google::Apis::RequestOptions] options
|
1593
|
-
# Request-specific options
|
1594
|
-
#
|
1595
|
-
# @yield [result, err] Result & error if block supplied
|
1596
|
-
# @yieldparam result [Google::Apis::GenomicsV1::Variant] parsed result object
|
1597
|
-
# @yieldparam err [StandardError] error object if request failed
|
1598
|
-
#
|
1599
|
-
# @return [Google::Apis::GenomicsV1::Variant]
|
1600
|
-
#
|
1601
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1602
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1603
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1604
|
-
def create_variant(variant_object = nil, fields: nil, quota_user: nil, options: nil, &block)
|
1605
|
-
command = make_simple_command(:post, 'v1/variants', options)
|
1606
|
-
command.request_representation = Google::Apis::GenomicsV1::Variant::Representation
|
1607
|
-
command.request_object = variant_object
|
1608
|
-
command.response_representation = Google::Apis::GenomicsV1::Variant::Representation
|
1609
|
-
command.response_class = Google::Apis::GenomicsV1::Variant
|
1610
|
-
command.query['fields'] = fields unless fields.nil?
|
1611
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1612
|
-
execute_or_queue_command(command, &block)
|
1613
|
-
end
|
1614
|
-
|
1615
|
-
# Deletes a variant.
|
1616
|
-
# @param [String] variant_id
|
1617
|
-
# The ID of the variant to be deleted.
|
1618
|
-
# @param [String] fields
|
1619
|
-
# Selector specifying which fields to include in a partial response.
|
1620
|
-
# @param [String] quota_user
|
1621
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
1622
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
1623
|
-
# @param [Google::Apis::RequestOptions] options
|
1624
|
-
# Request-specific options
|
1625
|
-
#
|
1626
|
-
# @yield [result, err] Result & error if block supplied
|
1627
|
-
# @yieldparam result [Google::Apis::GenomicsV1::Empty] parsed result object
|
1628
|
-
# @yieldparam err [StandardError] error object if request failed
|
1629
|
-
#
|
1630
|
-
# @return [Google::Apis::GenomicsV1::Empty]
|
1631
|
-
#
|
1632
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1633
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1634
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1635
|
-
def delete_variant(variant_id, fields: nil, quota_user: nil, options: nil, &block)
|
1636
|
-
command = make_simple_command(:delete, 'v1/variants/{variantId}', options)
|
1637
|
-
command.response_representation = Google::Apis::GenomicsV1::Empty::Representation
|
1638
|
-
command.response_class = Google::Apis::GenomicsV1::Empty
|
1639
|
-
command.params['variantId'] = variant_id unless variant_id.nil?
|
1640
|
-
command.query['fields'] = fields unless fields.nil?
|
1641
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1642
|
-
execute_or_queue_command(command, &block)
|
1643
|
-
end
|
1644
|
-
|
1645
|
-
# Gets a variant by ID.
|
1646
|
-
# @param [String] variant_id
|
1647
|
-
# The ID of the variant.
|
1648
|
-
# @param [String] fields
|
1649
|
-
# Selector specifying which fields to include in a partial response.
|
1650
|
-
# @param [String] quota_user
|
1651
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
1652
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
1653
|
-
# @param [Google::Apis::RequestOptions] options
|
1654
|
-
# Request-specific options
|
1655
|
-
#
|
1656
|
-
# @yield [result, err] Result & error if block supplied
|
1657
|
-
# @yieldparam result [Google::Apis::GenomicsV1::Variant] parsed result object
|
1658
|
-
# @yieldparam err [StandardError] error object if request failed
|
1659
|
-
#
|
1660
|
-
# @return [Google::Apis::GenomicsV1::Variant]
|
1661
|
-
#
|
1662
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1663
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1664
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1665
|
-
def get_variant(variant_id, fields: nil, quota_user: nil, options: nil, &block)
|
1666
|
-
command = make_simple_command(:get, 'v1/variants/{variantId}', options)
|
1667
|
-
command.response_representation = Google::Apis::GenomicsV1::Variant::Representation
|
1668
|
-
command.response_class = Google::Apis::GenomicsV1::Variant
|
1669
|
-
command.params['variantId'] = variant_id unless variant_id.nil?
|
1670
|
-
command.query['fields'] = fields unless fields.nil?
|
1671
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1672
|
-
execute_or_queue_command(command, &block)
|
1673
|
-
end
|
1674
|
-
|
1675
|
-
# Creates variant data by asynchronously importing the provided information.
|
1676
|
-
# The variants for import will be merged with any existing variant that
|
1677
|
-
# matches its reference sequence, start, end, reference bases, and
|
1678
|
-
# alternative bases. If no such variant exists, a new one will be created.
|
1679
|
-
# When variants are merged, the call information from the new variant
|
1680
|
-
# is added to the existing variant, and Variant info fields are merged
|
1681
|
-
# as specified in
|
1682
|
-
# infoMergeConfig.
|
1683
|
-
# As a special case, for single-sample VCF files, QUAL and FILTER fields will
|
1684
|
-
# be moved to the call level; these are sometimes interpreted in a
|
1685
|
-
# call-specific context.
|
1686
|
-
# Imported VCF headers are appended to the metadata already in a variant set.
|
1687
|
-
# @param [Google::Apis::GenomicsV1::ImportVariantsRequest] import_variants_request_object
|
1688
|
-
# @param [String] fields
|
1689
|
-
# Selector specifying which fields to include in a partial response.
|
1690
|
-
# @param [String] quota_user
|
1691
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
1692
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
1693
|
-
# @param [Google::Apis::RequestOptions] options
|
1694
|
-
# Request-specific options
|
1695
|
-
#
|
1696
|
-
# @yield [result, err] Result & error if block supplied
|
1697
|
-
# @yieldparam result [Google::Apis::GenomicsV1::Operation] parsed result object
|
1698
|
-
# @yieldparam err [StandardError] error object if request failed
|
1699
|
-
#
|
1700
|
-
# @return [Google::Apis::GenomicsV1::Operation]
|
1701
|
-
#
|
1702
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1703
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1704
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1705
|
-
def import_variants(import_variants_request_object = nil, fields: nil, quota_user: nil, options: nil, &block)
|
1706
|
-
command = make_simple_command(:post, 'v1/variants:import', options)
|
1707
|
-
command.request_representation = Google::Apis::GenomicsV1::ImportVariantsRequest::Representation
|
1708
|
-
command.request_object = import_variants_request_object
|
1709
|
-
command.response_representation = Google::Apis::GenomicsV1::Operation::Representation
|
1710
|
-
command.response_class = Google::Apis::GenomicsV1::Operation
|
1711
|
-
command.query['fields'] = fields unless fields.nil?
|
1712
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1713
|
-
execute_or_queue_command(command, &block)
|
1714
|
-
end
|
1715
|
-
|
1716
|
-
# Merges the given variants with existing variants.
|
1717
|
-
# Each variant will be
|
1718
|
-
# merged with an existing variant that matches its reference sequence,
|
1719
|
-
# start, end, reference bases, and alternative bases. If no such variant
|
1720
|
-
# exists, a new one will be created.
|
1721
|
-
# When variants are merged, the call information from the new variant
|
1722
|
-
# is added to the existing variant. Variant info fields are merged as
|
1723
|
-
# specified in the
|
1724
|
-
# infoMergeConfig
|
1725
|
-
# field of the MergeVariantsRequest.
|
1726
|
-
# Please exercise caution when using this method! It is easy to introduce
|
1727
|
-
# mistakes in existing variants and difficult to back out of them. For
|
1728
|
-
# example,
|
1729
|
-
# suppose you were trying to merge a new variant with an existing one and
|
1730
|
-
# both
|
1731
|
-
# variants contain calls that belong to callsets with the same callset ID.
|
1732
|
-
# // Existing variant - irrelevant fields trimmed for clarity
|
1733
|
-
# `
|
1734
|
-
# "variantSetId": "10473108253681171589",
|
1735
|
-
# "referenceName": "1",
|
1736
|
-
# "start": "10582",
|
1737
|
-
# "referenceBases": "G",
|
1738
|
-
# "alternateBases": [
|
1739
|
-
# "A"
|
1740
|
-
# ],
|
1741
|
-
# "calls": [
|
1742
|
-
# `
|
1743
|
-
# "callSetId": "10473108253681171589-0",
|
1744
|
-
# "callSetName": "CALLSET0",
|
1745
|
-
# "genotype": [
|
1746
|
-
# 0,
|
1747
|
-
# 1
|
1748
|
-
# ],
|
1749
|
-
# `
|
1750
|
-
# ]
|
1751
|
-
# `
|
1752
|
-
# // New variant with conflicting call information
|
1753
|
-
# `
|
1754
|
-
# "variantSetId": "10473108253681171589",
|
1755
|
-
# "referenceName": "1",
|
1756
|
-
# "start": "10582",
|
1757
|
-
# "referenceBases": "G",
|
1758
|
-
# "alternateBases": [
|
1759
|
-
# "A"
|
1760
|
-
# ],
|
1761
|
-
# "calls": [
|
1762
|
-
# `
|
1763
|
-
# "callSetId": "10473108253681171589-0",
|
1764
|
-
# "callSetName": "CALLSET0",
|
1765
|
-
# "genotype": [
|
1766
|
-
# 1,
|
1767
|
-
# 1
|
1768
|
-
# ],
|
1769
|
-
# `
|
1770
|
-
# ]
|
1771
|
-
# `
|
1772
|
-
# The resulting merged variant would overwrite the existing calls with those
|
1773
|
-
# from the new variant:
|
1774
|
-
# `
|
1775
|
-
# "variantSetId": "10473108253681171589",
|
1776
|
-
# "referenceName": "1",
|
1777
|
-
# "start": "10582",
|
1778
|
-
# "referenceBases": "G",
|
1779
|
-
# "alternateBases": [
|
1780
|
-
# "A"
|
1781
|
-
# ],
|
1782
|
-
# "calls": [
|
1783
|
-
# `
|
1784
|
-
# "callSetId": "10473108253681171589-0",
|
1785
|
-
# "callSetName": "CALLSET0",
|
1786
|
-
# "genotype": [
|
1787
|
-
# 1,
|
1788
|
-
# 1
|
1789
|
-
# ],
|
1790
|
-
# `
|
1791
|
-
# ]
|
1792
|
-
# `
|
1793
|
-
# This may be the desired outcome, but it is up to the user to determine if
|
1794
|
-
# if that is indeed the case.
|
1795
|
-
# @param [Google::Apis::GenomicsV1::MergeVariantsRequest] merge_variants_request_object
|
1796
|
-
# @param [String] fields
|
1797
|
-
# Selector specifying which fields to include in a partial response.
|
1798
|
-
# @param [String] quota_user
|
1799
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
1800
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
1801
|
-
# @param [Google::Apis::RequestOptions] options
|
1802
|
-
# Request-specific options
|
1803
|
-
#
|
1804
|
-
# @yield [result, err] Result & error if block supplied
|
1805
|
-
# @yieldparam result [Google::Apis::GenomicsV1::Empty] parsed result object
|
1806
|
-
# @yieldparam err [StandardError] error object if request failed
|
1807
|
-
#
|
1808
|
-
# @return [Google::Apis::GenomicsV1::Empty]
|
1809
|
-
#
|
1810
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1811
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1812
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1813
|
-
def merge_variants(merge_variants_request_object = nil, fields: nil, quota_user: nil, options: nil, &block)
|
1814
|
-
command = make_simple_command(:post, 'v1/variants:merge', options)
|
1815
|
-
command.request_representation = Google::Apis::GenomicsV1::MergeVariantsRequest::Representation
|
1816
|
-
command.request_object = merge_variants_request_object
|
1817
|
-
command.response_representation = Google::Apis::GenomicsV1::Empty::Representation
|
1818
|
-
command.response_class = Google::Apis::GenomicsV1::Empty
|
1819
|
-
command.query['fields'] = fields unless fields.nil?
|
1820
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1821
|
-
execute_or_queue_command(command, &block)
|
1822
|
-
end
|
1823
|
-
|
1824
|
-
# Updates a variant.
|
1825
|
-
# This method supports patch semantics. Returns the modified variant without
|
1826
|
-
# its calls.
|
1827
|
-
# @param [String] variant_id
|
1828
|
-
# The ID of the variant to be updated.
|
1829
|
-
# @param [Google::Apis::GenomicsV1::Variant] variant_object
|
1830
|
-
# @param [String] update_mask
|
1831
|
-
# An optional mask specifying which fields to update. At this time, mutable
|
1832
|
-
# fields are names and
|
1833
|
-
# info. Acceptable values are "names" and
|
1834
|
-
# "info". If unspecified, all mutable fields will be updated.
|
1835
|
-
# @param [String] fields
|
1836
|
-
# Selector specifying which fields to include in a partial response.
|
1837
|
-
# @param [String] quota_user
|
1838
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
1839
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
1840
|
-
# @param [Google::Apis::RequestOptions] options
|
1841
|
-
# Request-specific options
|
1842
|
-
#
|
1843
|
-
# @yield [result, err] Result & error if block supplied
|
1844
|
-
# @yieldparam result [Google::Apis::GenomicsV1::Variant] parsed result object
|
1845
|
-
# @yieldparam err [StandardError] error object if request failed
|
1846
|
-
#
|
1847
|
-
# @return [Google::Apis::GenomicsV1::Variant]
|
1848
|
-
#
|
1849
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1850
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1851
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1852
|
-
def patch_variant(variant_id, variant_object = nil, update_mask: nil, fields: nil, quota_user: nil, options: nil, &block)
|
1853
|
-
command = make_simple_command(:patch, 'v1/variants/{variantId}', options)
|
1854
|
-
command.request_representation = Google::Apis::GenomicsV1::Variant::Representation
|
1855
|
-
command.request_object = variant_object
|
1856
|
-
command.response_representation = Google::Apis::GenomicsV1::Variant::Representation
|
1857
|
-
command.response_class = Google::Apis::GenomicsV1::Variant
|
1858
|
-
command.params['variantId'] = variant_id unless variant_id.nil?
|
1859
|
-
command.query['updateMask'] = update_mask unless update_mask.nil?
|
1860
|
-
command.query['fields'] = fields unless fields.nil?
|
1861
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1862
|
-
execute_or_queue_command(command, &block)
|
1863
|
-
end
|
1864
|
-
|
1865
|
-
# Gets a list of variants matching the criteria.
|
1866
|
-
# Implements
|
1867
|
-
# [GlobalAllianceApi.searchVariants](https://github.com/ga4gh/schemas/blob/v0.5.
|
1868
|
-
# 1/src/main/resources/avro/variantmethods.avdl#L126).
|
1869
|
-
# @param [Google::Apis::GenomicsV1::SearchVariantsRequest] search_variants_request_object
|
1870
|
-
# @param [String] fields
|
1871
|
-
# Selector specifying which fields to include in a partial response.
|
1872
|
-
# @param [String] quota_user
|
1873
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
1874
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
1875
|
-
# @param [Google::Apis::RequestOptions] options
|
1876
|
-
# Request-specific options
|
1877
|
-
#
|
1878
|
-
# @yield [result, err] Result & error if block supplied
|
1879
|
-
# @yieldparam result [Google::Apis::GenomicsV1::SearchVariantsResponse] parsed result object
|
1880
|
-
# @yieldparam err [StandardError] error object if request failed
|
1881
|
-
#
|
1882
|
-
# @return [Google::Apis::GenomicsV1::SearchVariantsResponse]
|
1883
|
-
#
|
1884
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1885
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1886
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1887
|
-
def search_variants(search_variants_request_object = nil, fields: nil, quota_user: nil, options: nil, &block)
|
1888
|
-
command = make_simple_command(:post, 'v1/variants/search', options)
|
1889
|
-
command.request_representation = Google::Apis::GenomicsV1::SearchVariantsRequest::Representation
|
1890
|
-
command.request_object = search_variants_request_object
|
1891
|
-
command.response_representation = Google::Apis::GenomicsV1::SearchVariantsResponse::Representation
|
1892
|
-
command.response_class = Google::Apis::GenomicsV1::SearchVariantsResponse
|
1893
|
-
command.query['fields'] = fields unless fields.nil?
|
1894
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1895
|
-
execute_or_queue_command(command, &block)
|
1896
|
-
end
|
1897
|
-
|
1898
|
-
# Creates a new variant set.
|
1899
|
-
# The provided variant set must have a valid `datasetId` set - all other
|
1900
|
-
# fields are optional. Note that the `id` field will be ignored, as this is
|
1901
|
-
# assigned by the server.
|
1902
|
-
# @param [Google::Apis::GenomicsV1::VariantSet] variant_set_object
|
1903
|
-
# @param [String] fields
|
1904
|
-
# Selector specifying which fields to include in a partial response.
|
1905
|
-
# @param [String] quota_user
|
1906
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
1907
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
1908
|
-
# @param [Google::Apis::RequestOptions] options
|
1909
|
-
# Request-specific options
|
1910
|
-
#
|
1911
|
-
# @yield [result, err] Result & error if block supplied
|
1912
|
-
# @yieldparam result [Google::Apis::GenomicsV1::VariantSet] parsed result object
|
1913
|
-
# @yieldparam err [StandardError] error object if request failed
|
1914
|
-
#
|
1915
|
-
# @return [Google::Apis::GenomicsV1::VariantSet]
|
1916
|
-
#
|
1917
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1918
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1919
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1920
|
-
def create_variantset(variant_set_object = nil, fields: nil, quota_user: nil, options: nil, &block)
|
1921
|
-
command = make_simple_command(:post, 'v1/variantsets', options)
|
1922
|
-
command.request_representation = Google::Apis::GenomicsV1::VariantSet::Representation
|
1923
|
-
command.request_object = variant_set_object
|
1924
|
-
command.response_representation = Google::Apis::GenomicsV1::VariantSet::Representation
|
1925
|
-
command.response_class = Google::Apis::GenomicsV1::VariantSet
|
1926
|
-
command.query['fields'] = fields unless fields.nil?
|
1927
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1928
|
-
execute_or_queue_command(command, &block)
|
1929
|
-
end
|
1930
|
-
|
1931
|
-
# Deletes a variant set including all variants, call sets, and calls within.
|
1932
|
-
# This is not reversible.
|
1933
|
-
# @param [String] variant_set_id
|
1934
|
-
# The ID of the variant set to be deleted.
|
50
|
+
# Starts asynchronous cancellation on a long-running operation.
|
51
|
+
# The server makes a best effort to cancel the operation, but success is not
|
52
|
+
# guaranteed. Clients may use Operations.GetOperation
|
53
|
+
# or Operations.ListOperations
|
54
|
+
# to check whether the cancellation succeeded or the operation completed
|
55
|
+
# despite cancellation.
|
56
|
+
# Authorization requires the following [Google IAM](https://cloud.google.com/iam)
|
57
|
+
# permission:
|
58
|
+
# * `genomics.operations.cancel`
|
59
|
+
# @param [String] name
|
60
|
+
# The name of the operation resource to be cancelled.
|
61
|
+
# @param [Google::Apis::GenomicsV1::CancelOperationRequest] cancel_operation_request_object
|
1935
62
|
# @param [String] fields
|
1936
63
|
# Selector specifying which fields to include in a partial response.
|
1937
64
|
# @param [String] quota_user
|
@@ -1949,21 +76,26 @@ module Google
|
|
1949
76
|
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1950
77
|
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1951
78
|
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1952
|
-
def
|
1953
|
-
command = make_simple_command(:
|
79
|
+
def cancel_operation(name, cancel_operation_request_object = nil, fields: nil, quota_user: nil, options: nil, &block)
|
80
|
+
command = make_simple_command(:post, 'v1/{+name}:cancel', options)
|
81
|
+
command.request_representation = Google::Apis::GenomicsV1::CancelOperationRequest::Representation
|
82
|
+
command.request_object = cancel_operation_request_object
|
1954
83
|
command.response_representation = Google::Apis::GenomicsV1::Empty::Representation
|
1955
84
|
command.response_class = Google::Apis::GenomicsV1::Empty
|
1956
|
-
command.params['
|
85
|
+
command.params['name'] = name unless name.nil?
|
1957
86
|
command.query['fields'] = fields unless fields.nil?
|
1958
87
|
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1959
88
|
execute_or_queue_command(command, &block)
|
1960
89
|
end
|
1961
90
|
|
1962
|
-
#
|
1963
|
-
#
|
1964
|
-
#
|
1965
|
-
#
|
1966
|
-
#
|
91
|
+
# Gets the latest state of a long-running operation.
|
92
|
+
# Clients can use this method to poll the operation result at intervals as
|
93
|
+
# recommended by the API service.
|
94
|
+
# Authorization requires the following [Google IAM](https://cloud.google.com/iam)
|
95
|
+
# permission:
|
96
|
+
# * `genomics.operations.get`
|
97
|
+
# @param [String] name
|
98
|
+
# The name of the operation resource.
|
1967
99
|
# @param [String] fields
|
1968
100
|
# Selector specifying which fields to include in a partial response.
|
1969
101
|
# @param [String] quota_user
|
@@ -1981,94 +113,53 @@ module Google
|
|
1981
113
|
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
1982
114
|
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
1983
115
|
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
1984
|
-
def
|
1985
|
-
command = make_simple_command(:
|
1986
|
-
command.request_representation = Google::Apis::GenomicsV1::ExportVariantSetRequest::Representation
|
1987
|
-
command.request_object = export_variant_set_request_object
|
116
|
+
def get_operation(name, fields: nil, quota_user: nil, options: nil, &block)
|
117
|
+
command = make_simple_command(:get, 'v1/{+name}', options)
|
1988
118
|
command.response_representation = Google::Apis::GenomicsV1::Operation::Representation
|
1989
119
|
command.response_class = Google::Apis::GenomicsV1::Operation
|
1990
|
-
command.params['
|
1991
|
-
command.query['fields'] = fields unless fields.nil?
|
1992
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
1993
|
-
execute_or_queue_command(command, &block)
|
1994
|
-
end
|
1995
|
-
|
1996
|
-
# Gets a variant set by ID.
|
1997
|
-
# @param [String] variant_set_id
|
1998
|
-
# Required. The ID of the variant set.
|
1999
|
-
# @param [String] fields
|
2000
|
-
# Selector specifying which fields to include in a partial response.
|
2001
|
-
# @param [String] quota_user
|
2002
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
2003
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
2004
|
-
# @param [Google::Apis::RequestOptions] options
|
2005
|
-
# Request-specific options
|
2006
|
-
#
|
2007
|
-
# @yield [result, err] Result & error if block supplied
|
2008
|
-
# @yieldparam result [Google::Apis::GenomicsV1::VariantSet] parsed result object
|
2009
|
-
# @yieldparam err [StandardError] error object if request failed
|
2010
|
-
#
|
2011
|
-
# @return [Google::Apis::GenomicsV1::VariantSet]
|
2012
|
-
#
|
2013
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
2014
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
2015
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
2016
|
-
def get_variantset(variant_set_id, fields: nil, quota_user: nil, options: nil, &block)
|
2017
|
-
command = make_simple_command(:get, 'v1/variantsets/{variantSetId}', options)
|
2018
|
-
command.response_representation = Google::Apis::GenomicsV1::VariantSet::Representation
|
2019
|
-
command.response_class = Google::Apis::GenomicsV1::VariantSet
|
2020
|
-
command.params['variantSetId'] = variant_set_id unless variant_set_id.nil?
|
2021
|
-
command.query['fields'] = fields unless fields.nil?
|
2022
|
-
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
2023
|
-
execute_or_queue_command(command, &block)
|
2024
|
-
end
|
2025
|
-
|
2026
|
-
# Updates a variant set using patch semantics.
|
2027
|
-
# @param [String] variant_set_id
|
2028
|
-
# The ID of the variant to be updated (must already exist).
|
2029
|
-
# @param [Google::Apis::GenomicsV1::VariantSet] variant_set_object
|
2030
|
-
# @param [String] update_mask
|
2031
|
-
# An optional mask specifying which fields to update. Supported fields:
|
2032
|
-
# * metadata.
|
2033
|
-
# * name.
|
2034
|
-
# * description.
|
2035
|
-
# Leaving `updateMask` unset is equivalent to specifying all mutable
|
2036
|
-
# fields.
|
2037
|
-
# @param [String] fields
|
2038
|
-
# Selector specifying which fields to include in a partial response.
|
2039
|
-
# @param [String] quota_user
|
2040
|
-
# Available to use for quota purposes for server-side applications. Can be any
|
2041
|
-
# arbitrary string assigned to a user, but should not exceed 40 characters.
|
2042
|
-
# @param [Google::Apis::RequestOptions] options
|
2043
|
-
# Request-specific options
|
2044
|
-
#
|
2045
|
-
# @yield [result, err] Result & error if block supplied
|
2046
|
-
# @yieldparam result [Google::Apis::GenomicsV1::VariantSet] parsed result object
|
2047
|
-
# @yieldparam err [StandardError] error object if request failed
|
2048
|
-
#
|
2049
|
-
# @return [Google::Apis::GenomicsV1::VariantSet]
|
2050
|
-
#
|
2051
|
-
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
2052
|
-
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
2053
|
-
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
2054
|
-
def patch_variantset(variant_set_id, variant_set_object = nil, update_mask: nil, fields: nil, quota_user: nil, options: nil, &block)
|
2055
|
-
command = make_simple_command(:patch, 'v1/variantsets/{variantSetId}', options)
|
2056
|
-
command.request_representation = Google::Apis::GenomicsV1::VariantSet::Representation
|
2057
|
-
command.request_object = variant_set_object
|
2058
|
-
command.response_representation = Google::Apis::GenomicsV1::VariantSet::Representation
|
2059
|
-
command.response_class = Google::Apis::GenomicsV1::VariantSet
|
2060
|
-
command.params['variantSetId'] = variant_set_id unless variant_set_id.nil?
|
2061
|
-
command.query['updateMask'] = update_mask unless update_mask.nil?
|
120
|
+
command.params['name'] = name unless name.nil?
|
2062
121
|
command.query['fields'] = fields unless fields.nil?
|
2063
122
|
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
2064
123
|
execute_or_queue_command(command, &block)
|
2065
124
|
end
|
2066
125
|
|
2067
|
-
#
|
2068
|
-
#
|
2069
|
-
#
|
2070
|
-
#
|
2071
|
-
# @param [
|
126
|
+
# Lists operations that match the specified filter in the request.
|
127
|
+
# Authorization requires the following [Google IAM](https://cloud.google.com/iam)
|
128
|
+
# permission:
|
129
|
+
# * `genomics.operations.list`
|
130
|
+
# @param [String] name
|
131
|
+
# The name of the operation's parent resource.
|
132
|
+
# @param [String] filter
|
133
|
+
# A string for filtering Operations.
|
134
|
+
# In v2alpha1, the following filter fields are supported:
|
135
|
+
# * createTime: The time this job was created
|
136
|
+
# * events: The set of event (names) that have occurred while running
|
137
|
+
# the pipeline. The : operator can be used to determine if a
|
138
|
+
# particular event has occurred.
|
139
|
+
# * error: If the pipeline is running, this value is NULL. Once the
|
140
|
+
# pipeline finishes, the value is the standard Google error code.
|
141
|
+
# * labels.key or labels."key with space" where key is a label key.
|
142
|
+
# * done: If the pipeline is running, this value is false. Once the
|
143
|
+
# pipeline finishes, the value is true.
|
144
|
+
# In v1 and v1alpha2, the following filter fields are supported:
|
145
|
+
# * projectId: Required. Corresponds to
|
146
|
+
# OperationMetadata.projectId.
|
147
|
+
# * createTime: The time this job was created, in seconds from the
|
148
|
+
# [epoch](http://en.wikipedia.org/wiki/Unix_time). Can use `>=` and/or `<=`
|
149
|
+
# operators.
|
150
|
+
# * status: Can be `RUNNING`, `SUCCESS`, `FAILURE`, or `CANCELED`. Only
|
151
|
+
# one status may be specified.
|
152
|
+
# * labels.key where key is a label key.
|
153
|
+
# Examples:
|
154
|
+
# * `projectId = my-project AND createTime >= 1432140000`
|
155
|
+
# * `projectId = my-project AND createTime >= 1432140000 AND createTime <=
|
156
|
+
# 1432150000 AND status = RUNNING`
|
157
|
+
# * `projectId = my-project AND labels.color = *`
|
158
|
+
# * `projectId = my-project AND labels.color = red`
|
159
|
+
# @param [Fixnum] page_size
|
160
|
+
# The maximum number of results to return. The maximum value is 256.
|
161
|
+
# @param [String] page_token
|
162
|
+
# The standard list page token.
|
2072
163
|
# @param [String] fields
|
2073
164
|
# Selector specifying which fields to include in a partial response.
|
2074
165
|
# @param [String] quota_user
|
@@ -2078,20 +169,22 @@ module Google
|
|
2078
169
|
# Request-specific options
|
2079
170
|
#
|
2080
171
|
# @yield [result, err] Result & error if block supplied
|
2081
|
-
# @yieldparam result [Google::Apis::GenomicsV1::
|
172
|
+
# @yieldparam result [Google::Apis::GenomicsV1::ListOperationsResponse] parsed result object
|
2082
173
|
# @yieldparam err [StandardError] error object if request failed
|
2083
174
|
#
|
2084
|
-
# @return [Google::Apis::GenomicsV1::
|
175
|
+
# @return [Google::Apis::GenomicsV1::ListOperationsResponse]
|
2085
176
|
#
|
2086
177
|
# @raise [Google::Apis::ServerError] An error occurred on the server and the request can be retried
|
2087
178
|
# @raise [Google::Apis::ClientError] The request is invalid and should not be retried without modification
|
2088
179
|
# @raise [Google::Apis::AuthorizationError] Authorization is required
|
2089
|
-
def
|
2090
|
-
command = make_simple_command(:
|
2091
|
-
command.
|
2092
|
-
command.
|
2093
|
-
command.
|
2094
|
-
command.
|
180
|
+
def list_operations(name, filter: nil, page_size: nil, page_token: nil, fields: nil, quota_user: nil, options: nil, &block)
|
181
|
+
command = make_simple_command(:get, 'v1/{+name}', options)
|
182
|
+
command.response_representation = Google::Apis::GenomicsV1::ListOperationsResponse::Representation
|
183
|
+
command.response_class = Google::Apis::GenomicsV1::ListOperationsResponse
|
184
|
+
command.params['name'] = name unless name.nil?
|
185
|
+
command.query['filter'] = filter unless filter.nil?
|
186
|
+
command.query['pageSize'] = page_size unless page_size.nil?
|
187
|
+
command.query['pageToken'] = page_token unless page_token.nil?
|
2095
188
|
command.query['fields'] = fields unless fields.nil?
|
2096
189
|
command.query['quotaUser'] = quota_user unless quota_user.nil?
|
2097
190
|
execute_or_queue_command(command, &block)
|