entropy 0.0.2
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- data/.gitignore +4 -0
- data/Gemfile +4 -0
- data/LICENSE.txt +674 -0
- data/README.txt +48 -0
- data/Rakefile +22 -0
- data/doc/rdocs/Entropy.html +234 -0
- data/doc/rdocs/Entropy/Dict.html +311 -0
- data/doc/rdocs/Entropy/ProbabilityMetricSpace.html +544 -0
- data/doc/rdocs/Entropy/ProbabilitySpace.html +473 -0
- data/doc/rdocs/Entropy/Stream.html +281 -0
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- data/doc/rdocs/js/quicksearch.js +114 -0
- data/doc/rdocs/js/thickbox-compressed.js +10 -0
- data/doc/rdocs/lib/entropy/dict_rb.html +56 -0
- data/doc/rdocs/lib/entropy/metric_space_rb.html +54 -0
- data/doc/rdocs/lib/entropy/probability_space_rb.html +52 -0
- data/doc/rdocs/lib/entropy/stream_rb.html +52 -0
- data/doc/rdocs/lib/entropy/version_rb.html +52 -0
- data/doc/rdocs/lib/entropy_rb.html +62 -0
- data/doc/rdocs/rdoc.css +763 -0
- data/entropy.gemspec +24 -0
- data/example/metric_prob_space.rb +42 -0
- data/example/prob_space.rb +31 -0
- data/lib/entropy.rb +13 -0
- data/lib/entropy/dict.rb +30 -0
- data/lib/entropy/metric_space.rb +116 -0
- data/lib/entropy/probability_space.rb +91 -0
- data/lib/entropy/stream.rb +37 -0
- data/lib/entropy/version.rb +3 -0
- data/test/stream0.txt +1 -0
- data/test/stream1.txt +1 -0
- data/test/stream2.txt +1 -0
- data/test/stream_random.bin +2 -0
- data/test/test_entropy_def.rb +10 -0
- data/test/test_entropy_metr.rb +36 -0
- data/test/test_entropy_prob.rb +64 -0
- data/test/test_entropy_stream.rb +29 -0
- metadata +127 -0
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<h1 class="class">Entropy::ProbabilitySpace</h1>
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<p><a href="ProbabilitySpace.html">Entropy::ProbabilitySpace</a> defines a
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finite probability space</p>
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<span class="ruby-keyword">def</span> <span class="ruby-identifier">initialize</span>
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<span class="ruby-ivar">@space</span> = <span class="ruby-constant">Entropy</span><span class="ruby-operator">::</span><span class="ruby-constant">Stream</span>.<span class="ruby-identifier">new</span>
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<span class="ruby-identifier">card</span> = <span class="ruby-ivar">@prob_space</span>.<span class="ruby-identifier">map</span> {<span class="ruby-operator">|</span><span class="ruby-identifier">p</span><span class="ruby-operator">|</span> <span class="ruby-identifier">p</span><span class="ruby-operator">**</span>(<span class="ruby-operator">-</span><span class="ruby-identifier">p</span>)}.<span class="ruby-identifier">inject</span>(<span class="ruby-value">1</span>, <span class="ruby-value">:*</span>)
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<span class="ruby-identifier">card</span> = <span class="ruby-value">1.0</span><span class="ruby-operator">/</span><span class="ruby-ivar">@prob_space</span>.<span class="ruby-identifier">max</span>
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<span class="ruby-identifier">card</span> = <span class="ruby-identifier">card</span> <span class="ruby-operator">**</span> (<span class="ruby-value">1.0</span> <span class="ruby-operator">/</span> (<span class="ruby-value">1</span> <span class="ruby-operator">-</span> <span class="ruby-identifier">alpha</span>))
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<span class="ruby-comment"># File lib/entropy/probability_space.rb, line 41</span>
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<span class="ruby-keyword">def</span> <span class="ruby-identifier">diversity</span>(<span class="ruby-identifier">alpha</span>)
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<span class="ruby-ivar">@prob_space</span>.<span class="ruby-identifier">map</span> {<span class="ruby-operator">|</span><span class="ruby-identifier">p</span><span class="ruby-operator">|</span> <span class="ruby-identifier">p</span> * <span class="ruby-identifier">surprise</span>(<span class="ruby-identifier">alpha</span>, <span class="ruby-identifier">p</span>) }.<span class="ruby-identifier">inject</span>(<span class="ruby-value">:+</span>)
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<p>Computes the Renyi <a href="../Entropy.html">Entropy</a> (α-<a
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href="../Entropy.html">Entropy</a>) of the space</p>
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<span class="ruby-comment"># File lib/entropy/probability_space.rb, line 27</span>
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<span class="ruby-keyword">def</span> <span class="ruby-identifier">renyi_entropy</span>(<span class="ruby-identifier">alpha</span>)
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<span class="ruby-identifier">h</span> = <span class="ruby-value">0</span>
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<span class="ruby-identifier">h</span> = <span class="ruby-ivar">@prob_space</span>.<span class="ruby-identifier">map</span> {<span class="ruby-operator">|</span><span class="ruby-identifier">p</span><span class="ruby-operator">|</span> <span class="ruby-operator">-</span><span class="ruby-identifier">p</span> * <span class="ruby-constant">Math</span>.<span class="ruby-identifier">log</span>(<span class="ruby-identifier">p</span>, <span class="ruby-value">2</span>)}.<span class="ruby-identifier">inject</span>(<span class="ruby-value">:+</span>)
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<span class="ruby-identifier">h</span> = <span class="ruby-operator">-</span><span class="ruby-constant">Math</span>.<span class="ruby-identifier">log</span>(<span class="ruby-ivar">@prob_space</span>.<span class="ruby-identifier">max</span>, <span class="ruby-value">2</span>)
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<span class="ruby-identifier">h</span> = <span class="ruby-value">1.0</span> <span class="ruby-operator">/</span> (<span class="ruby-value">1</span> <span class="ruby-operator">-</span> <span class="ruby-identifier">alpha</span>) * <span class="ruby-constant">Math</span>.<span class="ruby-identifier">log</span>(<span class="ruby-identifier">h</span>, <span class="ruby-value">2</span>)
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<span class="ruby-keyword">end</span>
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<span class="ruby-identifier">h</span>
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<span class="ruby-keyword">end</span></pre>
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<div id="shannon_entropy-method" class="method-detail ">
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<a name="method-i-shannon_entropy"></a>
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<span class="method-name">shannon_entropy</span><span
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class="method-args">()</span>
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</div>
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<p>Computes the Shannon <a href="../Entropy.html">Entropy</a> of the space</p>
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<div class="method-source-code" id="shannon_entropy-source">
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<pre>
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<span class="ruby-comment"># File lib/entropy/probability_space.rb, line 22</span>
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<span class="ruby-keyword">def</span> <span class="ruby-identifier">shannon_entropy</span>
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<span class="ruby-identifier">diversity</span>(<span class="ruby-value">1</span>)
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<span class="ruby-keyword">end</span></pre>
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</div><!-- shannon_entropy-method -->
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<div id="surprise-method" class="method-detail ">
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<a name="method-i-surprise"></a>
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class="method-args">(alpha, p)</span>
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<p>Surprise function</p>
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<pre>
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<span class="ruby-comment"># File lib/entropy/probability_space.rb, line 46</span>
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<span class="ruby-keyword">def</span> <span class="ruby-identifier">surprise</span>(<span class="ruby-identifier">alpha</span>, <span class="ruby-identifier">p</span>)
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<span class="ruby-identifier">s</span> = <span class="ruby-value">0</span>
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<span class="ruby-identifier">s</span> = <span class="ruby-operator">-</span><span class="ruby-constant">Math</span>.<span class="ruby-identifier">log</span>(<span class="ruby-identifier">p</span>, <span class="ruby-value">2</span>)
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<span class="ruby-identifier">s</span> = <span class="ruby-value">1.0</span> <span class="ruby-operator">/</span> <span class="ruby-identifier">e</span> * (<span class="ruby-value">1</span> <span class="ruby-operator">-</span> <span class="ruby-identifier">p</span><span class="ruby-operator">**</span><span class="ruby-identifier">e</span>)
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<p><small><a href="http://validator.w3.org/check/referer">[Validate]</a></small></p>
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Rdoc Generator</a> 2</small>.</p>
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