datasketches 0.3.1 → 0.4.0
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- checksums.yaml +4 -4
- data/CHANGELOG.md +10 -0
- data/NOTICE +1 -1
- data/README.md +0 -2
- data/ext/datasketches/cpc_wrapper.cpp +3 -3
- data/ext/datasketches/kll_wrapper.cpp +0 -10
- data/lib/datasketches/version.rb +1 -1
- data/lib/datasketches.rb +1 -1
- data/vendor/datasketches-cpp/CMakeLists.txt +23 -20
- data/vendor/datasketches-cpp/CODE_OF_CONDUCT.md +3 -0
- data/vendor/datasketches-cpp/CONTRIBUTING.md +50 -0
- data/vendor/datasketches-cpp/Doxyfile +2827 -0
- data/vendor/datasketches-cpp/LICENSE +0 -76
- data/vendor/datasketches-cpp/README.md +1 -3
- data/vendor/datasketches-cpp/common/CMakeLists.txt +12 -11
- data/vendor/datasketches-cpp/common/include/MurmurHash3.h +25 -27
- data/vendor/datasketches-cpp/common/include/common_defs.hpp +15 -10
- data/vendor/datasketches-cpp/common/include/count_zeros.hpp +11 -2
- data/vendor/datasketches-cpp/common/include/kolmogorov_smirnov.hpp +9 -6
- data/vendor/datasketches-cpp/common/include/memory_operations.hpp +5 -4
- data/vendor/datasketches-cpp/common/include/optional.hpp +148 -0
- data/vendor/datasketches-cpp/common/include/quantiles_sorted_view.hpp +95 -2
- data/vendor/datasketches-cpp/common/include/quantiles_sorted_view_impl.hpp +1 -1
- data/vendor/datasketches-cpp/common/include/serde.hpp +69 -20
- data/vendor/datasketches-cpp/common/test/CMakeLists.txt +2 -2
- data/vendor/datasketches-cpp/common/test/integration_test.cpp +6 -0
- data/vendor/datasketches-cpp/common/test/optional_test.cpp +85 -0
- data/vendor/datasketches-cpp/common/test/test_allocator.hpp +14 -14
- data/vendor/datasketches-cpp/{python/src/__init__.py → count/CMakeLists.txt} +25 -1
- data/vendor/datasketches-cpp/count/include/count_min.hpp +405 -0
- data/vendor/datasketches-cpp/count/include/count_min_impl.hpp +497 -0
- data/vendor/datasketches-cpp/{MANIFEST.in → count/test/CMakeLists.txt} +23 -20
- data/vendor/datasketches-cpp/count/test/count_min_allocation_test.cpp +155 -0
- data/vendor/datasketches-cpp/count/test/count_min_test.cpp +303 -0
- data/vendor/datasketches-cpp/cpc/include/cpc_common.hpp +14 -20
- data/vendor/datasketches-cpp/cpc/include/cpc_compressor.hpp +7 -4
- data/vendor/datasketches-cpp/cpc/include/cpc_compressor_impl.hpp +17 -17
- data/vendor/datasketches-cpp/cpc/include/cpc_confidence.hpp +3 -3
- data/vendor/datasketches-cpp/cpc/include/cpc_sketch.hpp +40 -40
- data/vendor/datasketches-cpp/cpc/include/cpc_sketch_impl.hpp +14 -11
- data/vendor/datasketches-cpp/cpc/include/cpc_union.hpp +35 -11
- data/vendor/datasketches-cpp/cpc/include/cpc_union_impl.hpp +8 -8
- data/vendor/datasketches-cpp/cpc/include/cpc_util.hpp +16 -8
- data/vendor/datasketches-cpp/cpc/include/u32_table.hpp +3 -2
- data/vendor/datasketches-cpp/cpc/include/u32_table_impl.hpp +5 -5
- data/vendor/datasketches-cpp/cpc/test/CMakeLists.txt +20 -7
- data/vendor/datasketches-cpp/cpc/test/cpc_sketch_deserialize_from_java_test.cpp +60 -0
- data/vendor/datasketches-cpp/cpc/test/cpc_sketch_serialize_for_java.cpp +38 -0
- data/vendor/datasketches-cpp/cpc/test/cpc_sketch_test.cpp +4 -29
- data/vendor/datasketches-cpp/cpc/test/cpc_union_test.cpp +4 -4
- data/vendor/datasketches-cpp/{tox.ini → density/CMakeLists.txt} +24 -8
- data/vendor/datasketches-cpp/density/include/density_sketch.hpp +256 -0
- data/vendor/datasketches-cpp/density/include/density_sketch_impl.hpp +543 -0
- data/vendor/datasketches-cpp/{python/datasketches/__init__.py → density/test/CMakeLists.txt} +15 -3
- data/vendor/datasketches-cpp/density/test/density_sketch_test.cpp +244 -0
- data/vendor/datasketches-cpp/fi/include/frequent_items_sketch.hpp +21 -9
- data/vendor/datasketches-cpp/fi/include/frequent_items_sketch_impl.hpp +6 -4
- data/vendor/datasketches-cpp/fi/include/reverse_purge_hash_map.hpp +9 -3
- data/vendor/datasketches-cpp/fi/test/CMakeLists.txt +14 -1
- data/vendor/datasketches-cpp/fi/test/frequent_items_sketch_deserialize_from_java_test.cpp +95 -0
- data/vendor/datasketches-cpp/fi/test/frequent_items_sketch_serialize_for_java.cpp +83 -0
- data/vendor/datasketches-cpp/fi/test/frequent_items_sketch_test.cpp +3 -42
- data/vendor/datasketches-cpp/hll/include/CouponList-internal.hpp +2 -2
- data/vendor/datasketches-cpp/hll/include/CouponList.hpp +3 -1
- data/vendor/datasketches-cpp/hll/include/Hll4Array-internal.hpp +19 -11
- data/vendor/datasketches-cpp/hll/include/Hll4Array.hpp +2 -5
- data/vendor/datasketches-cpp/hll/include/Hll6Array-internal.hpp +19 -7
- data/vendor/datasketches-cpp/hll/include/Hll6Array.hpp +1 -1
- data/vendor/datasketches-cpp/hll/include/Hll8Array-internal.hpp +98 -42
- data/vendor/datasketches-cpp/hll/include/Hll8Array.hpp +2 -0
- data/vendor/datasketches-cpp/hll/include/HllArray-internal.hpp +94 -61
- data/vendor/datasketches-cpp/hll/include/HllArray.hpp +20 -8
- data/vendor/datasketches-cpp/hll/include/HllSketch-internal.hpp +4 -4
- data/vendor/datasketches-cpp/hll/include/HllSketchImpl.hpp +3 -1
- data/vendor/datasketches-cpp/hll/include/HllSketchImplFactory.hpp +3 -21
- data/vendor/datasketches-cpp/hll/include/HllUnion-internal.hpp +8 -0
- data/vendor/datasketches-cpp/hll/include/HllUtil.hpp +14 -18
- data/vendor/datasketches-cpp/hll/include/coupon_iterator-internal.hpp +1 -1
- data/vendor/datasketches-cpp/hll/include/coupon_iterator.hpp +8 -2
- data/vendor/datasketches-cpp/hll/include/hll.hpp +79 -65
- data/vendor/datasketches-cpp/hll/test/CMakeLists.txt +14 -1
- data/vendor/datasketches-cpp/hll/test/HllUnionTest.cpp +7 -1
- data/vendor/datasketches-cpp/hll/test/ToFromByteArrayTest.cpp +0 -68
- data/vendor/datasketches-cpp/hll/test/hll_sketch_deserialize_from_java_test.cpp +69 -0
- data/vendor/datasketches-cpp/hll/test/hll_sketch_serialize_for_java.cpp +52 -0
- data/vendor/datasketches-cpp/kll/include/kll_helper.hpp +0 -1
- data/vendor/datasketches-cpp/kll/include/kll_helper_impl.hpp +2 -2
- data/vendor/datasketches-cpp/kll/include/kll_sketch.hpp +79 -53
- data/vendor/datasketches-cpp/kll/include/kll_sketch_impl.hpp +61 -132
- data/vendor/datasketches-cpp/kll/test/CMakeLists.txt +14 -1
- data/vendor/datasketches-cpp/kll/test/kll_sketch_deserialize_from_java_test.cpp +103 -0
- data/vendor/datasketches-cpp/kll/test/kll_sketch_serialize_for_java.cpp +62 -0
- data/vendor/datasketches-cpp/kll/test/kll_sketch_test.cpp +5 -40
- data/vendor/datasketches-cpp/quantiles/include/quantiles_sketch.hpp +76 -54
- data/vendor/datasketches-cpp/quantiles/include/quantiles_sketch_impl.hpp +66 -136
- data/vendor/datasketches-cpp/quantiles/test/CMakeLists.txt +14 -1
- data/vendor/datasketches-cpp/quantiles/test/quantiles_sketch_deserialize_from_java_test.cpp +84 -0
- data/vendor/datasketches-cpp/quantiles/test/quantiles_sketch_serialize_for_java.cpp +52 -0
- data/vendor/datasketches-cpp/quantiles/test/quantiles_sketch_test.cpp +15 -39
- data/vendor/datasketches-cpp/req/include/req_common.hpp +7 -3
- data/vendor/datasketches-cpp/req/include/req_compactor_impl.hpp +2 -4
- data/vendor/datasketches-cpp/req/include/req_sketch.hpp +105 -26
- data/vendor/datasketches-cpp/req/include/req_sketch_impl.hpp +50 -111
- data/vendor/datasketches-cpp/req/test/CMakeLists.txt +14 -1
- data/vendor/datasketches-cpp/req/test/req_sketch_deserialize_from_java_test.cpp +55 -0
- data/vendor/datasketches-cpp/{tuple/include/array_of_doubles_intersection_impl.hpp → req/test/req_sketch_serialize_for_java.cpp} +12 -7
- data/vendor/datasketches-cpp/req/test/req_sketch_test.cpp +3 -89
- data/vendor/datasketches-cpp/sampling/CMakeLists.txt +4 -0
- data/vendor/datasketches-cpp/sampling/include/ebpps_sample.hpp +210 -0
- data/vendor/datasketches-cpp/sampling/include/ebpps_sample_impl.hpp +535 -0
- data/vendor/datasketches-cpp/sampling/include/ebpps_sketch.hpp +281 -0
- data/vendor/datasketches-cpp/sampling/include/ebpps_sketch_impl.hpp +531 -0
- data/vendor/datasketches-cpp/sampling/include/var_opt_sketch.hpp +89 -32
- data/vendor/datasketches-cpp/sampling/include/var_opt_sketch_impl.hpp +33 -19
- data/vendor/datasketches-cpp/sampling/include/var_opt_union.hpp +13 -10
- data/vendor/datasketches-cpp/sampling/include/var_opt_union_impl.hpp +23 -19
- data/vendor/datasketches-cpp/sampling/test/CMakeLists.txt +55 -8
- data/vendor/datasketches-cpp/sampling/test/ebpps_allocation_test.cpp +96 -0
- data/vendor/datasketches-cpp/sampling/test/ebpps_sample_test.cpp +137 -0
- data/vendor/datasketches-cpp/sampling/test/ebpps_sketch_test.cpp +266 -0
- data/vendor/datasketches-cpp/sampling/test/var_opt_sketch_deserialize_from_java_test.cpp +81 -0
- data/vendor/datasketches-cpp/sampling/test/var_opt_sketch_serialize_for_java.cpp +54 -0
- data/vendor/datasketches-cpp/sampling/test/var_opt_sketch_test.cpp +33 -51
- data/vendor/datasketches-cpp/sampling/test/var_opt_union_deserialize_from_java_test.cpp +50 -0
- data/vendor/datasketches-cpp/sampling/test/var_opt_union_serialize_for_java.cpp +56 -0
- data/vendor/datasketches-cpp/sampling/test/var_opt_union_test.cpp +0 -20
- data/vendor/datasketches-cpp/theta/CMakeLists.txt +1 -0
- data/vendor/datasketches-cpp/theta/include/bit_packing.hpp +6279 -0
- data/vendor/datasketches-cpp/theta/include/bounds_on_ratios_in_sampled_sets.hpp +1 -0
- data/vendor/datasketches-cpp/theta/include/bounds_on_ratios_in_theta_sketched_sets.hpp +7 -6
- data/vendor/datasketches-cpp/theta/include/compact_theta_sketch_parser.hpp +14 -8
- data/vendor/datasketches-cpp/theta/include/compact_theta_sketch_parser_impl.hpp +60 -46
- data/vendor/datasketches-cpp/theta/include/theta_a_not_b.hpp +20 -5
- data/vendor/datasketches-cpp/theta/include/theta_constants.hpp +10 -4
- data/vendor/datasketches-cpp/theta/include/theta_helpers.hpp +3 -1
- data/vendor/datasketches-cpp/theta/include/theta_intersection.hpp +13 -5
- data/vendor/datasketches-cpp/theta/include/theta_intersection_base_impl.hpp +5 -5
- data/vendor/datasketches-cpp/theta/include/theta_intersection_impl.hpp +3 -3
- data/vendor/datasketches-cpp/theta/include/theta_jaccard_similarity.hpp +2 -1
- data/vendor/datasketches-cpp/theta/include/theta_jaccard_similarity_base.hpp +1 -0
- data/vendor/datasketches-cpp/theta/include/theta_set_difference_base_impl.hpp +1 -1
- data/vendor/datasketches-cpp/theta/include/theta_sketch.hpp +180 -33
- data/vendor/datasketches-cpp/theta/include/theta_sketch_impl.hpp +430 -130
- data/vendor/datasketches-cpp/theta/include/theta_union.hpp +17 -10
- data/vendor/datasketches-cpp/theta/include/theta_union_base_impl.hpp +10 -10
- data/vendor/datasketches-cpp/theta/include/theta_union_impl.hpp +3 -3
- data/vendor/datasketches-cpp/theta/include/theta_update_sketch_base.hpp +21 -6
- data/vendor/datasketches-cpp/theta/include/theta_update_sketch_base_impl.hpp +13 -3
- data/vendor/datasketches-cpp/theta/test/CMakeLists.txt +15 -1
- data/vendor/datasketches-cpp/theta/test/bit_packing_test.cpp +80 -0
- data/vendor/datasketches-cpp/theta/test/theta_sketch_deserialize_from_java_test.cpp +57 -0
- data/vendor/datasketches-cpp/theta/test/theta_sketch_serialize_for_java.cpp +61 -0
- data/vendor/datasketches-cpp/theta/test/theta_sketch_test.cpp +39 -188
- data/vendor/datasketches-cpp/theta/test/theta_union_test.cpp +25 -0
- data/vendor/datasketches-cpp/tuple/CMakeLists.txt +8 -7
- data/vendor/datasketches-cpp/tuple/include/array_of_doubles_sketch.hpp +19 -144
- data/vendor/datasketches-cpp/tuple/include/{array_of_doubles_a_not_b.hpp → array_tuple_a_not_b.hpp} +24 -16
- data/vendor/datasketches-cpp/tuple/include/{array_of_doubles_a_not_b_impl.hpp → array_tuple_a_not_b_impl.hpp} +4 -4
- data/vendor/datasketches-cpp/tuple/include/array_tuple_intersection.hpp +65 -0
- data/vendor/datasketches-cpp/tuple/include/array_tuple_intersection_impl.hpp +31 -0
- data/vendor/datasketches-cpp/tuple/include/array_tuple_sketch.hpp +237 -0
- data/vendor/datasketches-cpp/tuple/include/{array_of_doubles_sketch_impl.hpp → array_tuple_sketch_impl.hpp} +40 -41
- data/vendor/datasketches-cpp/tuple/include/array_tuple_union.hpp +81 -0
- data/vendor/datasketches-cpp/tuple/include/array_tuple_union_impl.hpp +43 -0
- data/vendor/datasketches-cpp/tuple/include/tuple_a_not_b.hpp +11 -2
- data/vendor/datasketches-cpp/tuple/include/tuple_intersection.hpp +17 -10
- data/vendor/datasketches-cpp/tuple/include/tuple_jaccard_similarity.hpp +2 -1
- data/vendor/datasketches-cpp/tuple/include/tuple_sketch.hpp +95 -32
- data/vendor/datasketches-cpp/tuple/include/tuple_sketch_impl.hpp +2 -1
- data/vendor/datasketches-cpp/tuple/include/tuple_union.hpp +19 -11
- data/vendor/datasketches-cpp/tuple/test/CMakeLists.txt +16 -1
- data/vendor/datasketches-cpp/tuple/test/aod_sketch_deserialize_from_java_test.cpp +76 -0
- data/vendor/datasketches-cpp/tuple/test/aod_sketch_serialize_for_java.cpp +62 -0
- data/vendor/datasketches-cpp/tuple/test/array_of_doubles_sketch_test.cpp +5 -129
- data/vendor/datasketches-cpp/tuple/test/engagement_test.cpp +85 -89
- data/vendor/datasketches-cpp/tuple/test/tuple_jaccard_similarity_test.cpp +3 -1
- data/vendor/datasketches-cpp/tuple/test/tuple_sketch_deserialize_from_java_test.cpp +47 -0
- data/vendor/datasketches-cpp/{python/src/datasketches.cpp → tuple/test/tuple_sketch_serialize_for_java.cpp} +16 -30
- data/vendor/datasketches-cpp/tuple/test/tuple_sketch_test.cpp +1 -1
- data/vendor/datasketches-cpp/version.cfg.in +1 -1
- metadata +61 -79
- data/vendor/datasketches-cpp/fi/test/items_sketch_string_from_java.sk +0 -0
- data/vendor/datasketches-cpp/fi/test/items_sketch_string_utf8_from_java.sk +0 -0
- data/vendor/datasketches-cpp/fi/test/longs_sketch_from_java.sk +0 -0
- data/vendor/datasketches-cpp/hll/test/array6_from_java.sk +0 -0
- data/vendor/datasketches-cpp/hll/test/compact_array4_from_java.sk +0 -0
- data/vendor/datasketches-cpp/hll/test/compact_set_from_java.sk +0 -0
- data/vendor/datasketches-cpp/hll/test/list_from_java.sk +0 -0
- data/vendor/datasketches-cpp/hll/test/updatable_array4_from_java.sk +0 -0
- data/vendor/datasketches-cpp/hll/test/updatable_set_from_java.sk +0 -0
- data/vendor/datasketches-cpp/kll/test/kll_sketch_from_java.sk +0 -0
- data/vendor/datasketches-cpp/pyproject.toml +0 -23
- data/vendor/datasketches-cpp/python/CMakeLists.txt +0 -81
- data/vendor/datasketches-cpp/python/README.md +0 -85
- data/vendor/datasketches-cpp/python/datasketches/PySerDe.py +0 -104
- data/vendor/datasketches-cpp/python/include/py_serde.hpp +0 -113
- data/vendor/datasketches-cpp/python/jupyter/CPCSketch.ipynb +0 -345
- data/vendor/datasketches-cpp/python/jupyter/FrequentItemsSketch.ipynb +0 -354
- data/vendor/datasketches-cpp/python/jupyter/HLLSketch.ipynb +0 -346
- data/vendor/datasketches-cpp/python/jupyter/KLLSketch.ipynb +0 -463
- data/vendor/datasketches-cpp/python/jupyter/ThetaSketchNotebook.ipynb +0 -403
- data/vendor/datasketches-cpp/python/pybind11Path.cmd +0 -21
- data/vendor/datasketches-cpp/python/src/cpc_wrapper.cpp +0 -90
- data/vendor/datasketches-cpp/python/src/fi_wrapper.cpp +0 -128
- data/vendor/datasketches-cpp/python/src/hll_wrapper.cpp +0 -134
- data/vendor/datasketches-cpp/python/src/kll_wrapper.cpp +0 -210
- data/vendor/datasketches-cpp/python/src/ks_wrapper.cpp +0 -68
- data/vendor/datasketches-cpp/python/src/py_serde.cpp +0 -111
- data/vendor/datasketches-cpp/python/src/quantiles_wrapper.cpp +0 -204
- data/vendor/datasketches-cpp/python/src/req_wrapper.cpp +0 -215
- data/vendor/datasketches-cpp/python/src/theta_wrapper.cpp +0 -172
- data/vendor/datasketches-cpp/python/src/vector_of_kll.cpp +0 -490
- data/vendor/datasketches-cpp/python/src/vo_wrapper.cpp +0 -173
- data/vendor/datasketches-cpp/python/tests/__init__.py +0 -16
- data/vendor/datasketches-cpp/python/tests/cpc_test.py +0 -64
- data/vendor/datasketches-cpp/python/tests/fi_test.py +0 -110
- data/vendor/datasketches-cpp/python/tests/hll_test.py +0 -130
- data/vendor/datasketches-cpp/python/tests/kll_test.py +0 -125
- data/vendor/datasketches-cpp/python/tests/quantiles_test.py +0 -126
- data/vendor/datasketches-cpp/python/tests/req_test.py +0 -126
- data/vendor/datasketches-cpp/python/tests/theta_test.py +0 -146
- data/vendor/datasketches-cpp/python/tests/vector_of_kll_test.py +0 -148
- data/vendor/datasketches-cpp/python/tests/vo_test.py +0 -125
- data/vendor/datasketches-cpp/req/test/req_float_empty_from_java.sk +0 -0
- data/vendor/datasketches-cpp/req/test/req_float_estimation_from_java.sk +0 -0
- data/vendor/datasketches-cpp/req/test/req_float_exact_from_java.sk +0 -0
- data/vendor/datasketches-cpp/req/test/req_float_raw_items_from_java.sk +0 -0
- data/vendor/datasketches-cpp/req/test/req_float_single_item_from_java.sk +0 -0
- data/vendor/datasketches-cpp/sampling/test/binaries_from_java.txt +0 -67
- data/vendor/datasketches-cpp/sampling/test/varopt_sketch_long_sampling.sk +0 -0
- data/vendor/datasketches-cpp/sampling/test/varopt_sketch_string_exact.sk +0 -0
- data/vendor/datasketches-cpp/sampling/test/varopt_union_double_sampling.sk +0 -0
- data/vendor/datasketches-cpp/setup.py +0 -110
- data/vendor/datasketches-cpp/theta/test/theta_compact_empty_from_java.sk +0 -0
- data/vendor/datasketches-cpp/theta/test/theta_compact_estimation_from_java.sk +0 -0
- data/vendor/datasketches-cpp/theta/test/theta_compact_exact_from_java.sk +0 -0
- data/vendor/datasketches-cpp/theta/test/theta_compact_single_item_from_java.sk +0 -0
- data/vendor/datasketches-cpp/tuple/include/array_of_doubles_intersection.hpp +0 -52
- data/vendor/datasketches-cpp/tuple/include/array_of_doubles_union.hpp +0 -81
- data/vendor/datasketches-cpp/tuple/include/array_of_doubles_union_impl.hpp +0 -43
- data/vendor/datasketches-cpp/tuple/test/aod_1_compact_empty_from_java.sk +0 -1
- data/vendor/datasketches-cpp/tuple/test/aod_1_compact_estimation_from_java.sk +0 -0
- data/vendor/datasketches-cpp/tuple/test/aod_1_compact_non_empty_no_entries_from_java.sk +0 -0
- data/vendor/datasketches-cpp/tuple/test/aod_2_compact_exact_from_java.sk +0 -0
- data/vendor/datasketches-cpp/tuple/test/aod_3_compact_empty_from_java.sk +0 -1
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/*
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* Licensed to the Apache Software Foundation (ASF) under one
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* or more contributor license agreements. See the NOTICE file
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* distributed with this work for additional information
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* regarding copyright ownership. The ASF licenses this file
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* to you under the Apache License, Version 2.0 (the
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* "License"); you may not use this file except in compliance
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* with the License. You may obtain a copy of the License at
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*
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* http://www.apache.org/licenses/LICENSE-2.0
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*
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* Unless required by applicable law or agreed to in writing,
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* software distributed under the License is distributed on an
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* "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
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* KIND, either express or implied. See the License for the
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* specific language governing permissions and limitations
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* under the License.
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*/
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#include <catch2/catch.hpp>
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#include <vector>
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#include <cstring>
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#include <sstream>
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#include <fstream>
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#include "count_min.hpp"
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#include "common_defs.hpp"
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namespace datasketches {
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TEST_CASE("CM init - throws") {
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REQUIRE_THROWS_AS(count_min_sketch<uint64_t>(5, 1), std::invalid_argument);
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REQUIRE_THROWS_AS(count_min_sketch<uint64_t>(4, 268435456), std::invalid_argument);
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}
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TEST_CASE("CM init") {
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uint8_t n_hashes = 3;
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uint32_t n_buckets = 5;
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uint64_t seed = 1234567;
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count_min_sketch<uint64_t> c(n_hashes, n_buckets, seed);
|
41
|
+
REQUIRE(c.get_num_hashes() == n_hashes);
|
42
|
+
REQUIRE(c.get_num_buckets() == n_buckets);
|
43
|
+
REQUIRE(c.get_seed() == seed);
|
44
|
+
REQUIRE(c.is_empty());
|
45
|
+
|
46
|
+
for (auto x: c) {
|
47
|
+
REQUIRE(x == 0);
|
48
|
+
}
|
49
|
+
|
50
|
+
// Check the default seed is appropriately set.
|
51
|
+
count_min_sketch<uint64_t> c1(n_hashes, n_buckets);
|
52
|
+
REQUIRE(c1.get_seed() == DEFAULT_SEED);
|
53
|
+
}
|
54
|
+
|
55
|
+
TEST_CASE("CM parameter suggestions", "[error parameters]") {
|
56
|
+
|
57
|
+
// Bucket suggestions
|
58
|
+
REQUIRE_THROWS(count_min_sketch<uint64_t>::suggest_num_buckets(-1.0), "Confidence must be between 0 and 1.0 (inclusive)." );
|
59
|
+
REQUIRE(count_min_sketch<uint64_t>::suggest_num_buckets(0.2) == 14);
|
60
|
+
REQUIRE(count_min_sketch<uint64_t>::suggest_num_buckets(0.1) == 28);
|
61
|
+
REQUIRE(count_min_sketch<uint64_t>::suggest_num_buckets(0.05) == 55);
|
62
|
+
REQUIRE(count_min_sketch<uint64_t>::suggest_num_buckets(0.01) == 272);
|
63
|
+
|
64
|
+
// Check that the sketch get_epsilon acts inversely to suggest_num_buckets
|
65
|
+
uint8_t n_hashes = 3;
|
66
|
+
REQUIRE(count_min_sketch<uint64_t>(n_hashes, 14).get_relative_error() <= 0.2);
|
67
|
+
REQUIRE(count_min_sketch<uint64_t>(n_hashes, 28).get_relative_error() <= 0.1);
|
68
|
+
REQUIRE(count_min_sketch<uint64_t>(n_hashes, 55).get_relative_error() <= 0.05);
|
69
|
+
REQUIRE(count_min_sketch<uint64_t>(n_hashes, 272).get_relative_error() <= 0.01);
|
70
|
+
|
71
|
+
// Hash suggestions
|
72
|
+
REQUIRE_THROWS(count_min_sketch<uint64_t>::suggest_num_hashes(10.0), "Confidence must be between 0 and 1.0 (inclusive)." );
|
73
|
+
REQUIRE_THROWS(count_min_sketch<uint64_t>::suggest_num_hashes(-1.0), "Confidence must be between 0 and 1.0 (inclusive)." );
|
74
|
+
REQUIRE(count_min_sketch<uint64_t>::suggest_num_hashes(0.682689492) == 2); // 1 STDDEV
|
75
|
+
REQUIRE(count_min_sketch<uint64_t>::suggest_num_hashes(0.954499736) == 4); // 2 STDDEV
|
76
|
+
REQUIRE(count_min_sketch<uint64_t>::suggest_num_hashes(0.997300204) == 6); // 3 STDDEV
|
77
|
+
}
|
78
|
+
|
79
|
+
TEST_CASE("CM one update: uint64_t") {
|
80
|
+
uint8_t n_hashes = 3;
|
81
|
+
uint32_t n_buckets = 5;
|
82
|
+
uint64_t seed = 9223372036854775807; //1234567;
|
83
|
+
uint64_t inserted_weight = 0;
|
84
|
+
count_min_sketch<uint64_t> c(n_hashes, n_buckets, seed);
|
85
|
+
std::string x = "x";
|
86
|
+
|
87
|
+
REQUIRE(c.is_empty());
|
88
|
+
REQUIRE(c.get_estimate("x") == 0); // No items in sketch so estimates should be zero
|
89
|
+
c.update(x);
|
90
|
+
REQUIRE(!c.is_empty());
|
91
|
+
REQUIRE(c.get_estimate(x) == 1);
|
92
|
+
inserted_weight += 1;
|
93
|
+
|
94
|
+
uint64_t w = 9;
|
95
|
+
inserted_weight += w;
|
96
|
+
c.update(x, w);
|
97
|
+
REQUIRE(c.get_estimate(x) == inserted_weight);
|
98
|
+
|
99
|
+
// Doubles are converted to uint64_t
|
100
|
+
double w1 = 10.0;
|
101
|
+
inserted_weight += static_cast<uint64_t>(w1);
|
102
|
+
c.update(x, static_cast<uint64_t>(w1));
|
103
|
+
REQUIRE(c.get_estimate(x) == inserted_weight);
|
104
|
+
REQUIRE(c.get_total_weight() == inserted_weight);
|
105
|
+
REQUIRE(c.get_estimate(x) <= c.get_upper_bound(x));
|
106
|
+
REQUIRE(c.get_estimate(x) >= c.get_lower_bound(x));
|
107
|
+
}
|
108
|
+
|
109
|
+
TEST_CASE("CM frequency cancellation") {
|
110
|
+
count_min_sketch<int64_t> c(1, 5);
|
111
|
+
c.update("x");
|
112
|
+
c.update("y", -1);
|
113
|
+
REQUIRE(c.get_total_weight() == 2);
|
114
|
+
REQUIRE(c.get_estimate("x") == 1);
|
115
|
+
REQUIRE(c.get_estimate("y") == -1);
|
116
|
+
}
|
117
|
+
|
118
|
+
TEST_CASE("CM frequency estimates") {
|
119
|
+
int number_of_items = 10;
|
120
|
+
std::vector<uint64_t> data(number_of_items);
|
121
|
+
std::vector<uint64_t> frequencies(number_of_items);
|
122
|
+
|
123
|
+
// Populate data vector
|
124
|
+
for (int i = 0; i < number_of_items; ++i) {
|
125
|
+
data[i] = i;
|
126
|
+
frequencies[i] = 1ULL << (number_of_items - i);
|
127
|
+
}
|
128
|
+
|
129
|
+
double relative_error = 0.1;
|
130
|
+
double confidence = 0.99;
|
131
|
+
uint32_t n_buckets = count_min_sketch<uint64_t>::suggest_num_buckets(relative_error);
|
132
|
+
uint8_t n_hashes = count_min_sketch<uint64_t>::suggest_num_hashes(confidence);
|
133
|
+
|
134
|
+
count_min_sketch<uint64_t> c(n_hashes, n_buckets);
|
135
|
+
for (int i = 0; i < number_of_items; ++i) {
|
136
|
+
uint64_t value = data[i];
|
137
|
+
uint64_t freq = frequencies[i];
|
138
|
+
c.update(value, freq);
|
139
|
+
}
|
140
|
+
|
141
|
+
for (const auto i: data) {
|
142
|
+
uint64_t est = c.get_estimate(i);
|
143
|
+
uint64_t upp = c.get_upper_bound(i);
|
144
|
+
uint64_t low = c.get_lower_bound(i);
|
145
|
+
REQUIRE(est <= upp);
|
146
|
+
REQUIRE(est >= low);
|
147
|
+
}
|
148
|
+
}
|
149
|
+
|
150
|
+
TEST_CASE("CM merge - reject", "[reject cases]") {
|
151
|
+
double relative_error = 0.25;
|
152
|
+
double confidence = 0.9;
|
153
|
+
uint32_t n_buckets = count_min_sketch<uint64_t>::suggest_num_buckets(relative_error);
|
154
|
+
uint8_t n_hashes = count_min_sketch<uint64_t>::suggest_num_hashes(confidence);
|
155
|
+
count_min_sketch<uint64_t> s(n_hashes, n_buckets, 9082435234709287);
|
156
|
+
|
157
|
+
// Generate sketches that we cannot merge into ie they disagree on at least one of the config entries
|
158
|
+
count_min_sketch<uint64_t> s1(n_hashes+1, n_buckets); // incorrect number of hashes
|
159
|
+
count_min_sketch<uint64_t> s2(n_hashes, n_buckets + 1); // incorrect number of buckets
|
160
|
+
count_min_sketch<uint64_t> s3(n_hashes, n_buckets, 1); // incorrect seed
|
161
|
+
std::vector<count_min_sketch<uint64_t>> sketches = {s1, s2, s3};
|
162
|
+
|
163
|
+
// Fail cases
|
164
|
+
REQUIRE_THROWS(s.merge(s), "Cannot merge a sketch with itself." );
|
165
|
+
for (count_min_sketch<uint64_t> sk : sketches) {
|
166
|
+
REQUIRE_THROWS(s.merge(sk), "Incompatible sketch config." );
|
167
|
+
}
|
168
|
+
}
|
169
|
+
|
170
|
+
TEST_CASE("CM merge - pass", "[acceptable cases]") {
|
171
|
+
double relative_error = 0.25;
|
172
|
+
double confidence = 0.9;
|
173
|
+
uint32_t n_buckets = count_min_sketch<uint64_t>::suggest_num_buckets(relative_error);
|
174
|
+
uint8_t n_hashes = count_min_sketch<uint64_t>::suggest_num_hashes(confidence);
|
175
|
+
count_min_sketch<uint64_t> s(n_hashes, n_buckets);
|
176
|
+
uint8_t s_hashes = s.get_num_hashes();
|
177
|
+
uint32_t s_buckets = s.get_num_buckets();
|
178
|
+
count_min_sketch<uint64_t> t(s_hashes, s_buckets);
|
179
|
+
|
180
|
+
// Merge in an all-zeros sketch t. Should not change the total weight.
|
181
|
+
s.merge(t);
|
182
|
+
REQUIRE(s.get_total_weight() == 0 );
|
183
|
+
|
184
|
+
std::vector<uint64_t> data = {2,3,5,7};
|
185
|
+
for (auto d: data) {
|
186
|
+
s.update(d);
|
187
|
+
t.update(d);
|
188
|
+
}
|
189
|
+
s.merge(t);
|
190
|
+
|
191
|
+
REQUIRE(s.get_total_weight() == 2 * t.get_total_weight());
|
192
|
+
|
193
|
+
// Estimator checks.
|
194
|
+
for (auto x: data) {
|
195
|
+
REQUIRE(s.get_estimate(x) <= s.get_upper_bound(x));
|
196
|
+
REQUIRE(s.get_estimate(x) <= 2); // True frequency x == 2 for all x.
|
197
|
+
}
|
198
|
+
}
|
199
|
+
|
200
|
+
TEST_CASE("CountMin sketch: serialize-deserialize empty", "[cm_sketch]") {
|
201
|
+
uint8_t n_hashes = 1;
|
202
|
+
uint32_t n_buckets = 5;
|
203
|
+
std::stringstream s(std::ios::in | std::ios::out | std::ios::binary);
|
204
|
+
count_min_sketch<uint64_t> c(n_hashes, n_buckets);
|
205
|
+
c.serialize(s);
|
206
|
+
count_min_sketch<uint64_t> d = count_min_sketch<uint64_t>::deserialize(s, DEFAULT_SEED);
|
207
|
+
REQUIRE(c.get_num_hashes() == d.get_num_hashes());
|
208
|
+
REQUIRE(c.get_num_buckets() == d.get_num_buckets());
|
209
|
+
REQUIRE(c.get_seed() == d.get_seed());
|
210
|
+
uint64_t zero = 0;
|
211
|
+
REQUIRE(c.get_estimate(zero) == d.get_estimate(zero));
|
212
|
+
REQUIRE(c.get_total_weight() == d.get_total_weight());
|
213
|
+
|
214
|
+
// Check that all entries are equal and 0
|
215
|
+
for (auto di: d) {
|
216
|
+
REQUIRE(di == 0);
|
217
|
+
}
|
218
|
+
std::ofstream os("count_min-empty.bin");
|
219
|
+
c.serialize(os);
|
220
|
+
}
|
221
|
+
|
222
|
+
TEST_CASE("CountMin sketch: serialize-deserialize non-empty", "[cm_sketch]") {
|
223
|
+
uint8_t n_hashes = 3;
|
224
|
+
uint32_t n_buckets = 1024;
|
225
|
+
std::stringstream s(std::ios::in | std::ios::out | std::ios::binary);
|
226
|
+
count_min_sketch<uint64_t> c(n_hashes, n_buckets);
|
227
|
+
for (uint64_t i = 0; i < 10; ++i) c.update(i, 10 * i * i);
|
228
|
+
c.serialize(s);
|
229
|
+
count_min_sketch<uint64_t> d = count_min_sketch<uint64_t>::deserialize(s, DEFAULT_SEED);
|
230
|
+
REQUIRE(c.get_num_hashes() == d.get_num_hashes());
|
231
|
+
REQUIRE(c.get_num_buckets() == d.get_num_buckets());
|
232
|
+
REQUIRE(c.get_seed() == d.get_seed());
|
233
|
+
REQUIRE(c.get_total_weight() == d.get_total_weight());
|
234
|
+
for (uint64_t i = 0; i < 10; ++i) {
|
235
|
+
REQUIRE(c.get_estimate(i) == d.get_estimate(i));
|
236
|
+
}
|
237
|
+
|
238
|
+
auto c_it = c.begin();
|
239
|
+
auto d_it = d.begin();
|
240
|
+
while (c_it != c.end()) {
|
241
|
+
REQUIRE(*c_it == *d_it);
|
242
|
+
++c_it;
|
243
|
+
++d_it;
|
244
|
+
}
|
245
|
+
|
246
|
+
std::ofstream os("count_min-non-empty.bin");
|
247
|
+
c.serialize(os);
|
248
|
+
}
|
249
|
+
|
250
|
+
TEST_CASE("CountMin sketch: bytes serialize-deserialize empty", "[cm_sketch]") {
|
251
|
+
uint8_t n_hashes = 3;
|
252
|
+
uint32_t n_buckets = 32;
|
253
|
+
count_min_sketch<uint64_t> c(n_hashes, n_buckets);
|
254
|
+
auto bytes = c.serialize();
|
255
|
+
|
256
|
+
REQUIRE_THROWS_AS(count_min_sketch<uint64_t>::deserialize(bytes.data(), bytes.size(), DEFAULT_SEED-1), std::invalid_argument);
|
257
|
+
auto d = count_min_sketch<uint64_t>::deserialize(bytes.data(), bytes.size(), DEFAULT_SEED);
|
258
|
+
REQUIRE(c.get_num_hashes() == d.get_num_hashes());
|
259
|
+
REQUIRE(c.get_num_buckets() == d.get_num_buckets());
|
260
|
+
REQUIRE(c.get_seed() == d.get_seed());
|
261
|
+
uint64_t zero = 0;
|
262
|
+
REQUIRE(c.get_estimate(zero) == d.get_estimate(zero));
|
263
|
+
REQUIRE(c.get_total_weight() == d.get_total_weight());
|
264
|
+
|
265
|
+
// Check that all entries are equal and 0
|
266
|
+
for (auto di: d) {
|
267
|
+
REQUIRE(di == 0);
|
268
|
+
}
|
269
|
+
}
|
270
|
+
|
271
|
+
|
272
|
+
TEST_CASE("CountMin sketch: bytes serialize-deserialize non-empty", "[cm_sketch]") {
|
273
|
+
uint8_t n_hashes = 5;
|
274
|
+
uint32_t n_buckets = 64;
|
275
|
+
count_min_sketch<uint64_t> c(n_hashes, n_buckets);
|
276
|
+
for(uint64_t i=0; i < 10; ++i) c.update(i,10*i*i);
|
277
|
+
|
278
|
+
auto bytes = c.serialize();
|
279
|
+
REQUIRE_THROWS_AS(count_min_sketch<uint64_t>::deserialize(bytes.data(), bytes.size(), DEFAULT_SEED-1), std::invalid_argument);
|
280
|
+
auto d = count_min_sketch<uint64_t>::deserialize(bytes.data(), bytes.size(), DEFAULT_SEED);
|
281
|
+
|
282
|
+
REQUIRE(c.get_num_hashes() == d.get_num_hashes());
|
283
|
+
REQUIRE(c.get_num_buckets() == d.get_num_buckets());
|
284
|
+
REQUIRE(c.get_seed() == d.get_seed());
|
285
|
+
REQUIRE(c.get_total_weight() == d.get_total_weight());
|
286
|
+
|
287
|
+
// Check that all entries are equal
|
288
|
+
auto c_it = c.begin();
|
289
|
+
auto d_it = d.begin();
|
290
|
+
while (c_it != c.end()) {
|
291
|
+
REQUIRE(*c_it == *d_it);
|
292
|
+
++c_it;
|
293
|
+
++d_it;
|
294
|
+
}
|
295
|
+
|
296
|
+
// Check that the estimates agree
|
297
|
+
for (uint64_t i = 0; i < 10; ++i) {
|
298
|
+
REQUIRE(c.get_estimate(i) == d.get_estimate(i));
|
299
|
+
}
|
300
|
+
|
301
|
+
}
|
302
|
+
|
303
|
+
} /* namespace datasketches */
|
@@ -26,45 +26,39 @@
|
|
26
26
|
|
27
27
|
namespace datasketches {
|
28
28
|
|
29
|
+
/// CPC constants
|
29
30
|
namespace cpc_constants {
|
30
|
-
|
31
|
-
|
32
|
-
|
31
|
+
/// min log2 of K
|
32
|
+
const uint8_t MIN_LG_K = 4;
|
33
|
+
/// max log2 of K
|
34
|
+
const uint8_t MAX_LG_K = 26;
|
35
|
+
/// default log2 of K
|
36
|
+
const uint8_t DEFAULT_LG_K = 11;
|
33
37
|
}
|
34
38
|
|
35
|
-
// TODO: Redundant and deprecated. Will be removed in next major version release.
|
36
|
-
static const uint8_t CPC_MIN_LG_K = cpc_constants::MIN_LG_K;
|
37
|
-
static const uint8_t CPC_MAX_LG_K = cpc_constants::MAX_LG_K;
|
38
|
-
static const uint8_t CPC_DEFAULT_LG_K = cpc_constants::DEFAULT_LG_K;
|
39
|
-
|
40
|
-
template<typename A> using AllocU8 = typename std::allocator_traits<A>::template rebind_alloc<uint8_t>;
|
41
|
-
template<typename A> using AllocU16 = typename std::allocator_traits<A>::template rebind_alloc<uint16_t>;
|
42
|
-
template<typename A> using AllocU32 = typename std::allocator_traits<A>::template rebind_alloc<uint32_t>;
|
43
|
-
template<typename A> using AllocU64 = typename std::allocator_traits<A>::template rebind_alloc<uint64_t>;
|
44
|
-
|
45
|
-
template<typename A> using vector_u8 = std::vector<uint8_t, AllocU8<A>>;
|
46
|
-
template<typename A> using vector_u32 = std::vector<uint32_t, AllocU32<A>>;
|
47
|
-
template<typename A> using vector_u64 = std::vector<uint64_t, AllocU64<A>>;
|
48
|
-
|
49
39
|
// forward declaration
|
50
40
|
template<typename A> class u32_table;
|
51
41
|
|
52
42
|
template<typename A>
|
53
43
|
struct compressed_state {
|
44
|
+
using vector_u32 = std::vector<uint32_t, typename std::allocator_traits<A>::template rebind_alloc<uint32_t>>;
|
45
|
+
|
54
46
|
explicit compressed_state(const A& allocator): table_data(allocator), table_data_words(0), table_num_entries(0),
|
55
47
|
window_data(allocator), window_data_words(0) {}
|
56
|
-
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vector_u32 table_data;
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vector_u32 window_data;
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};
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template<typename A>
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struct uncompressed_state {
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using vector_bytes = std::vector<uint8_t, typename std::allocator_traits<A>::template rebind_alloc<uint8_t>>;
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explicit uncompressed_state(const A& allocator): table(allocator), window(allocator) {}
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vector_bytes window;
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} /* namespace datasketches */
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@@ -47,6 +47,9 @@ inline cpc_compressor<A>& get_compressor();
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template<typename A>
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class cpc_compressor {
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public:
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using vector_bytes = std::vector<uint8_t, typename std::allocator_traits<A>::template rebind_alloc<uint8_t>>;
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using vector_u32 = std::vector<uint32_t, typename std::allocator_traits<A>::template rebind_alloc<uint32_t>>;
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void compress(const cpc_sketch_alloc<A>& source, compressed_state<A>& target) const;
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void uncompress(const compressed_state<A>& source, uncompressed_state<A>& target, uint8_t lg_k, uint32_t num_coupons) const;
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@@ -126,17 +129,17 @@ private:
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uint16_t* make_decoding_table(const uint16_t* encoding_table, unsigned num_byte_values);
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void validate_decoding_table(const uint16_t* decoding_table, const uint16_t* encoding_table) const;
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void compress_surprising_values(const vector_u32
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void compress_surprising_values(const vector_u32& pairs, uint8_t lg_k, compressed_state<A>& result) const;
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void compress_sliding_window(const uint8_t* window, uint8_t lg_k, uint32_t num_coupons, compressed_state<A>& target) const;
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vector_u32
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void uncompress_sliding_window(const uint32_t* data, uint32_t data_words,
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vector_u32 uncompress_surprising_values(const uint32_t* data, uint32_t data_words, uint32_t num_pairs, uint8_t lg_k, const A& allocator) const;
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void uncompress_sliding_window(const uint32_t* data, uint32_t data_words, vector_bytes& window, uint8_t lg_k, uint32_t num_coupons) const;
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static size_t safe_length_for_compressed_pair_buf(uint32_t k, uint32_t num_pairs, uint8_t num_base_bits);
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static size_t safe_length_for_compressed_window_buf(uint32_t k);
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static uint8_t determine_pseudo_phase(uint8_t lg_k, uint32_t c);
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static inline vector_u32
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static inline vector_u32 tricky_get_pairs_from_window(const uint8_t* window, uint32_t k, uint32_t num_pairs_to_get, uint32_t empty_space, const A& allocator);
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static inline uint8_t golomb_choose_number_of_base_bits(uint32_t k, uint64_t count);
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};
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@@ -183,7 +183,7 @@ void cpc_compressor<A>::uncompress(const compressed_state<A>& source, uncompress
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template<typename A>
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void cpc_compressor<A>::compress_sparse_flavor(const cpc_sketch_alloc<A>& source, compressed_state<A>& result) const {
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if (source.sliding_window.size() > 0) throw std::logic_error("unexpected sliding window");
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vector_u32
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vector_u32 pairs = source.surprising_value_table.unwrapping_get_items();
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u32_table<A>::introspective_insertion_sort(pairs.data(), 0, pairs.size());
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compress_surprising_values(pairs, source.get_lg_k(), result);
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}
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void cpc_compressor<A>::uncompress_sparse_flavor(const compressed_state<A>& source, uncompressed_state<A>& target, uint8_t lg_k) const {
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if (source.window_data.size() > 0) throw std::logic_error("unexpected sliding window");
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if (source.table_data.size() == 0) throw std::logic_error("table is expected");
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vector_u32
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+
vector_u32 pairs = uncompress_surprising_values(source.table_data.data(), source.table_data_words, source.table_num_entries,
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lg_k, source.table_data.get_allocator());
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target.table = u32_table<A>::make_from_pairs(pairs.data(), source.table_num_entries, lg_k, pairs.get_allocator());
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}
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@@ -204,12 +204,12 @@ void cpc_compressor<A>::compress_hybrid_flavor(const cpc_sketch_alloc<A>& source
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if (source.sliding_window.size() == 0) throw std::logic_error("no sliding window");
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if (source.window_offset != 0) throw std::logic_error("window_offset != 0");
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const uint32_t k = 1 << source.get_lg_k();
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vector_u32
|
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+
vector_u32 pairs_from_table = source.surprising_value_table.unwrapping_get_items();
|
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const uint32_t num_pairs_from_table = static_cast<uint32_t>(pairs_from_table.size());
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if (num_pairs_from_table > 0) u32_table<A>::introspective_insertion_sort(pairs_from_table.data(), 0, num_pairs_from_table);
|
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|
const uint32_t num_pairs_from_window = source.get_num_coupons() - num_pairs_from_table; // because the window offset is zero
|
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|
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vector_u32
|
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+
vector_u32 all_pairs = tricky_get_pairs_from_window(source.sliding_window.data(), k, num_pairs_from_window, num_pairs_from_table, source.get_allocator());
|
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u32_table<A>::merge(
|
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pairs_from_table.data(), 0, pairs_from_table.size(),
|
@@ -224,7 +224,7 @@ template<typename A>
|
|
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|
void cpc_compressor<A>::uncompress_hybrid_flavor(const compressed_state<A>& source, uncompressed_state<A>& target, uint8_t lg_k) const {
|
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|
if (source.window_data.size() > 0) throw std::logic_error("window is not expected");
|
226
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|
if (source.table_data.size() == 0) throw std::logic_error("table is expected");
|
227
|
-
vector_u32
|
227
|
+
vector_u32 pairs = uncompress_surprising_values(source.table_data.data(), source.table_data_words, source.table_num_entries,
|
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228
|
lg_k, source.table_data.get_allocator());
|
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|
|
230
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|
// In the hybrid flavor, some of these pairs actually
|
@@ -250,7 +250,7 @@ void cpc_compressor<A>::uncompress_hybrid_flavor(const compressed_state<A>& sour
|
|
250
250
|
template<typename A>
|
251
251
|
void cpc_compressor<A>::compress_pinned_flavor(const cpc_sketch_alloc<A>& source, compressed_state<A>& result) const {
|
252
252
|
compress_sliding_window(source.sliding_window.data(), source.get_lg_k(), source.get_num_coupons(), result);
|
253
|
-
vector_u32
|
253
|
+
vector_u32 pairs = source.surprising_value_table.unwrapping_get_items();
|
254
254
|
if (pairs.size() > 0) {
|
255
255
|
// Here we subtract 8 from the column indices. Because they are stored in the low 6 bits
|
256
256
|
// of each row_col pair, and because no column index is less than 8 for a "Pinned" sketch,
|
@@ -277,7 +277,7 @@ void cpc_compressor<A>::uncompress_pinned_flavor(const compressed_state<A>& sour
|
|
277
277
|
target.table = u32_table<A>(2, 6 + lg_k, source.table_data.get_allocator());
|
278
278
|
} else {
|
279
279
|
if (source.table_data.size() == 0) throw std::logic_error("table is expected");
|
280
|
-
vector_u32
|
280
|
+
vector_u32 pairs = uncompress_surprising_values(source.table_data.data(), source.table_data_words, num_pairs,
|
281
281
|
lg_k, source.table_data.get_allocator());
|
282
282
|
// undo the compressor's 8-column shift
|
283
283
|
for (uint32_t i = 0; i < num_pairs; i++) {
|
@@ -291,7 +291,7 @@ void cpc_compressor<A>::uncompress_pinned_flavor(const compressed_state<A>& sour
|
|
291
291
|
template<typename A>
|
292
292
|
void cpc_compressor<A>::compress_sliding_flavor(const cpc_sketch_alloc<A>& source, compressed_state<A>& result) const {
|
293
293
|
compress_sliding_window(source.sliding_window.data(), source.get_lg_k(), source.get_num_coupons(), result);
|
294
|
-
vector_u32
|
294
|
+
vector_u32 pairs = source.surprising_value_table.unwrapping_get_items();
|
295
295
|
if (pairs.size() > 0) {
|
296
296
|
// Here we apply a complicated transformation to the column indices, which
|
297
297
|
// changes the implied ordering of the pairs, so we must do it before sorting.
|
@@ -330,7 +330,7 @@ void cpc_compressor<A>::uncompress_sliding_flavor(const compressed_state<A>& sou
|
|
330
330
|
target.table = u32_table<A>(2, 6 + lg_k, source.table_data.get_allocator());
|
331
331
|
} else {
|
332
332
|
if (source.table_data.size() == 0) throw std::logic_error("table is expected");
|
333
|
-
vector_u32
|
333
|
+
vector_u32 pairs = uncompress_surprising_values(source.table_data.data(), source.table_data_words, num_pairs,
|
334
334
|
lg_k, source.table_data.get_allocator());
|
335
335
|
|
336
336
|
const uint8_t pseudo_phase = determine_pseudo_phase(lg_k, num_coupons);
|
@@ -356,7 +356,7 @@ void cpc_compressor<A>::uncompress_sliding_flavor(const compressed_state<A>& sou
|
|
356
356
|
}
|
357
357
|
|
358
358
|
template<typename A>
|
359
|
-
void cpc_compressor<A>::compress_surprising_values(const vector_u32
|
359
|
+
void cpc_compressor<A>::compress_surprising_values(const vector_u32& pairs, uint8_t lg_k, compressed_state<A>& result) const {
|
360
360
|
const uint32_t k = 1 << lg_k;
|
361
361
|
const uint32_t num_pairs = static_cast<uint32_t>(pairs.size());
|
362
362
|
const uint8_t num_base_bits = golomb_choose_number_of_base_bits(k + num_pairs, num_pairs);
|
@@ -374,10 +374,10 @@ void cpc_compressor<A>::compress_surprising_values(const vector_u32<A>& pairs, u
|
|
374
374
|
}
|
375
375
|
|
376
376
|
template<typename A>
|
377
|
-
|
378
|
-
uint8_t lg_k, const A& allocator) const {
|
377
|
+
auto cpc_compressor<A>::uncompress_surprising_values(const uint32_t* data, uint32_t data_words, uint32_t num_pairs,
|
378
|
+
uint8_t lg_k, const A& allocator) const -> vector_u32 {
|
379
379
|
const uint32_t k = 1 << lg_k;
|
380
|
-
vector_u32
|
380
|
+
vector_u32 pairs(num_pairs, 0, allocator);
|
381
381
|
const uint8_t num_base_bits = golomb_choose_number_of_base_bits(k + num_pairs, num_pairs);
|
382
382
|
low_level_uncompress_pairs(pairs.data(), num_pairs, num_base_bits, data, data_words);
|
383
383
|
return pairs;
|
@@ -399,7 +399,7 @@ void cpc_compressor<A>::compress_sliding_window(const uint8_t* window, uint8_t l
|
|
399
399
|
}
|
400
400
|
|
401
401
|
template<typename A>
|
402
|
-
void cpc_compressor<A>::uncompress_sliding_window(const uint32_t* data, uint32_t data_words,
|
402
|
+
void cpc_compressor<A>::uncompress_sliding_window(const uint32_t* data, uint32_t data_words, vector_bytes& window,
|
403
403
|
uint8_t lg_k, uint32_t num_coupons) const {
|
404
404
|
const uint32_t k = 1 << lg_k;
|
405
405
|
window.resize(k); // zeroing not needed here (unlike the Hybrid Flavor)
|
@@ -722,10 +722,10 @@ void write_unary(
|
|
722
722
|
// The empty space that this leaves at the beginning of the output array
|
723
723
|
// will be filled in later by the caller.
|
724
724
|
template<typename A>
|
725
|
-
|
726
|
-
uint32_t empty_space, const A& allocator) {
|
725
|
+
auto cpc_compressor<A>::tricky_get_pairs_from_window(const uint8_t* window, uint32_t k, uint32_t num_pairs_to_get,
|
726
|
+
uint32_t empty_space, const A& allocator) -> vector_u32 {
|
727
727
|
const size_t output_length = empty_space + num_pairs_to_get;
|
728
|
-
vector_u32
|
728
|
+
vector_u32 pairs(output_length, 0, allocator);
|
729
729
|
size_t pair_index = empty_space;
|
730
730
|
for (unsigned row_index = 0; row_index < k; row_index++) {
|
731
731
|
uint8_t byte = window[row_index];
|
@@ -30,7 +30,7 @@
|
|
30
30
|
namespace datasketches {
|
31
31
|
|
32
32
|
// ln 2.0
|
33
|
-
static const double
|
33
|
+
static const double ICON_ERROR_CONSTANT = 0.693147180559945286;
|
34
34
|
|
35
35
|
// 1, 2, 3, // kappa
|
36
36
|
static const int16_t ICON_LOW_SIDE_DATA [33] = { // Empirically measured at N = 1000 * K.
|
@@ -102,7 +102,7 @@ double get_icon_confidence_lb(const cpc_sketch_alloc<A>& sketch, int kappa) {
|
|
102
102
|
const long k = 1 << lg_k;
|
103
103
|
if (lg_k < 4) throw std::logic_error("lgk < 4");
|
104
104
|
if (kappa < 1 || kappa > 3) throw std::invalid_argument("kappa must be between 1 and 3");
|
105
|
-
double x =
|
105
|
+
double x = ICON_ERROR_CONSTANT;
|
106
106
|
if (lg_k <= 14) x = ((double) ICON_HIGH_SIDE_DATA[3 * (lg_k - 4) + (kappa - 1)]) / 10000.0;
|
107
107
|
const double rel = x / sqrt(k);
|
108
108
|
const double eps = kappa * rel;
|
@@ -120,7 +120,7 @@ double get_icon_confidence_ub(const cpc_sketch_alloc<A>& sketch, int kappa) {
|
|
120
120
|
const long k = 1 << lg_k;
|
121
121
|
if (lg_k < 4) throw std::logic_error("lgk < 4");
|
122
122
|
if (kappa < 1 || kappa > 3) throw std::invalid_argument("kappa must be between 1 and 3");
|
123
|
-
double x =
|
123
|
+
double x = ICON_ERROR_CONSTANT;
|
124
124
|
if (lg_k <= 14) x = ((double) ICON_LOW_SIDE_DATA[3 * (lg_k - 4) + (kappa - 1)]) / 10000.0;
|
125
125
|
const double rel = x / sqrt(k);
|
126
126
|
const double eps = kappa * rel;
|