datasketches 0.3.1 → 0.4.0
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- checksums.yaml +4 -4
- data/CHANGELOG.md +10 -0
- data/NOTICE +1 -1
- data/README.md +0 -2
- data/ext/datasketches/cpc_wrapper.cpp +3 -3
- data/ext/datasketches/kll_wrapper.cpp +0 -10
- data/lib/datasketches/version.rb +1 -1
- data/lib/datasketches.rb +1 -1
- data/vendor/datasketches-cpp/CMakeLists.txt +23 -20
- data/vendor/datasketches-cpp/CODE_OF_CONDUCT.md +3 -0
- data/vendor/datasketches-cpp/CONTRIBUTING.md +50 -0
- data/vendor/datasketches-cpp/Doxyfile +2827 -0
- data/vendor/datasketches-cpp/LICENSE +0 -76
- data/vendor/datasketches-cpp/README.md +1 -3
- data/vendor/datasketches-cpp/common/CMakeLists.txt +12 -11
- data/vendor/datasketches-cpp/common/include/MurmurHash3.h +25 -27
- data/vendor/datasketches-cpp/common/include/common_defs.hpp +15 -10
- data/vendor/datasketches-cpp/common/include/count_zeros.hpp +11 -2
- data/vendor/datasketches-cpp/common/include/kolmogorov_smirnov.hpp +9 -6
- data/vendor/datasketches-cpp/common/include/memory_operations.hpp +5 -4
- data/vendor/datasketches-cpp/common/include/optional.hpp +148 -0
- data/vendor/datasketches-cpp/common/include/quantiles_sorted_view.hpp +95 -2
- data/vendor/datasketches-cpp/common/include/quantiles_sorted_view_impl.hpp +1 -1
- data/vendor/datasketches-cpp/common/include/serde.hpp +69 -20
- data/vendor/datasketches-cpp/common/test/CMakeLists.txt +2 -2
- data/vendor/datasketches-cpp/common/test/integration_test.cpp +6 -0
- data/vendor/datasketches-cpp/common/test/optional_test.cpp +85 -0
- data/vendor/datasketches-cpp/common/test/test_allocator.hpp +14 -14
- data/vendor/datasketches-cpp/{python/src/__init__.py → count/CMakeLists.txt} +25 -1
- data/vendor/datasketches-cpp/count/include/count_min.hpp +405 -0
- data/vendor/datasketches-cpp/count/include/count_min_impl.hpp +497 -0
- data/vendor/datasketches-cpp/{MANIFEST.in → count/test/CMakeLists.txt} +23 -20
- data/vendor/datasketches-cpp/count/test/count_min_allocation_test.cpp +155 -0
- data/vendor/datasketches-cpp/count/test/count_min_test.cpp +303 -0
- data/vendor/datasketches-cpp/cpc/include/cpc_common.hpp +14 -20
- data/vendor/datasketches-cpp/cpc/include/cpc_compressor.hpp +7 -4
- data/vendor/datasketches-cpp/cpc/include/cpc_compressor_impl.hpp +17 -17
- data/vendor/datasketches-cpp/cpc/include/cpc_confidence.hpp +3 -3
- data/vendor/datasketches-cpp/cpc/include/cpc_sketch.hpp +40 -40
- data/vendor/datasketches-cpp/cpc/include/cpc_sketch_impl.hpp +14 -11
- data/vendor/datasketches-cpp/cpc/include/cpc_union.hpp +35 -11
- data/vendor/datasketches-cpp/cpc/include/cpc_union_impl.hpp +8 -8
- data/vendor/datasketches-cpp/cpc/include/cpc_util.hpp +16 -8
- data/vendor/datasketches-cpp/cpc/include/u32_table.hpp +3 -2
- data/vendor/datasketches-cpp/cpc/include/u32_table_impl.hpp +5 -5
- data/vendor/datasketches-cpp/cpc/test/CMakeLists.txt +20 -7
- data/vendor/datasketches-cpp/cpc/test/cpc_sketch_deserialize_from_java_test.cpp +60 -0
- data/vendor/datasketches-cpp/cpc/test/cpc_sketch_serialize_for_java.cpp +38 -0
- data/vendor/datasketches-cpp/cpc/test/cpc_sketch_test.cpp +4 -29
- data/vendor/datasketches-cpp/cpc/test/cpc_union_test.cpp +4 -4
- data/vendor/datasketches-cpp/{tox.ini → density/CMakeLists.txt} +24 -8
- data/vendor/datasketches-cpp/density/include/density_sketch.hpp +256 -0
- data/vendor/datasketches-cpp/density/include/density_sketch_impl.hpp +543 -0
- data/vendor/datasketches-cpp/{python/datasketches/__init__.py → density/test/CMakeLists.txt} +15 -3
- data/vendor/datasketches-cpp/density/test/density_sketch_test.cpp +244 -0
- data/vendor/datasketches-cpp/fi/include/frequent_items_sketch.hpp +21 -9
- data/vendor/datasketches-cpp/fi/include/frequent_items_sketch_impl.hpp +6 -4
- data/vendor/datasketches-cpp/fi/include/reverse_purge_hash_map.hpp +9 -3
- data/vendor/datasketches-cpp/fi/test/CMakeLists.txt +14 -1
- data/vendor/datasketches-cpp/fi/test/frequent_items_sketch_deserialize_from_java_test.cpp +95 -0
- data/vendor/datasketches-cpp/fi/test/frequent_items_sketch_serialize_for_java.cpp +83 -0
- data/vendor/datasketches-cpp/fi/test/frequent_items_sketch_test.cpp +3 -42
- data/vendor/datasketches-cpp/hll/include/CouponList-internal.hpp +2 -2
- data/vendor/datasketches-cpp/hll/include/CouponList.hpp +3 -1
- data/vendor/datasketches-cpp/hll/include/Hll4Array-internal.hpp +19 -11
- data/vendor/datasketches-cpp/hll/include/Hll4Array.hpp +2 -5
- data/vendor/datasketches-cpp/hll/include/Hll6Array-internal.hpp +19 -7
- data/vendor/datasketches-cpp/hll/include/Hll6Array.hpp +1 -1
- data/vendor/datasketches-cpp/hll/include/Hll8Array-internal.hpp +98 -42
- data/vendor/datasketches-cpp/hll/include/Hll8Array.hpp +2 -0
- data/vendor/datasketches-cpp/hll/include/HllArray-internal.hpp +94 -61
- data/vendor/datasketches-cpp/hll/include/HllArray.hpp +20 -8
- data/vendor/datasketches-cpp/hll/include/HllSketch-internal.hpp +4 -4
- data/vendor/datasketches-cpp/hll/include/HllSketchImpl.hpp +3 -1
- data/vendor/datasketches-cpp/hll/include/HllSketchImplFactory.hpp +3 -21
- data/vendor/datasketches-cpp/hll/include/HllUnion-internal.hpp +8 -0
- data/vendor/datasketches-cpp/hll/include/HllUtil.hpp +14 -18
- data/vendor/datasketches-cpp/hll/include/coupon_iterator-internal.hpp +1 -1
- data/vendor/datasketches-cpp/hll/include/coupon_iterator.hpp +8 -2
- data/vendor/datasketches-cpp/hll/include/hll.hpp +79 -65
- data/vendor/datasketches-cpp/hll/test/CMakeLists.txt +14 -1
- data/vendor/datasketches-cpp/hll/test/HllUnionTest.cpp +7 -1
- data/vendor/datasketches-cpp/hll/test/ToFromByteArrayTest.cpp +0 -68
- data/vendor/datasketches-cpp/hll/test/hll_sketch_deserialize_from_java_test.cpp +69 -0
- data/vendor/datasketches-cpp/hll/test/hll_sketch_serialize_for_java.cpp +52 -0
- data/vendor/datasketches-cpp/kll/include/kll_helper.hpp +0 -1
- data/vendor/datasketches-cpp/kll/include/kll_helper_impl.hpp +2 -2
- data/vendor/datasketches-cpp/kll/include/kll_sketch.hpp +79 -53
- data/vendor/datasketches-cpp/kll/include/kll_sketch_impl.hpp +61 -132
- data/vendor/datasketches-cpp/kll/test/CMakeLists.txt +14 -1
- data/vendor/datasketches-cpp/kll/test/kll_sketch_deserialize_from_java_test.cpp +103 -0
- data/vendor/datasketches-cpp/kll/test/kll_sketch_serialize_for_java.cpp +62 -0
- data/vendor/datasketches-cpp/kll/test/kll_sketch_test.cpp +5 -40
- data/vendor/datasketches-cpp/quantiles/include/quantiles_sketch.hpp +76 -54
- data/vendor/datasketches-cpp/quantiles/include/quantiles_sketch_impl.hpp +66 -136
- data/vendor/datasketches-cpp/quantiles/test/CMakeLists.txt +14 -1
- data/vendor/datasketches-cpp/quantiles/test/quantiles_sketch_deserialize_from_java_test.cpp +84 -0
- data/vendor/datasketches-cpp/quantiles/test/quantiles_sketch_serialize_for_java.cpp +52 -0
- data/vendor/datasketches-cpp/quantiles/test/quantiles_sketch_test.cpp +15 -39
- data/vendor/datasketches-cpp/req/include/req_common.hpp +7 -3
- data/vendor/datasketches-cpp/req/include/req_compactor_impl.hpp +2 -4
- data/vendor/datasketches-cpp/req/include/req_sketch.hpp +105 -26
- data/vendor/datasketches-cpp/req/include/req_sketch_impl.hpp +50 -111
- data/vendor/datasketches-cpp/req/test/CMakeLists.txt +14 -1
- data/vendor/datasketches-cpp/req/test/req_sketch_deserialize_from_java_test.cpp +55 -0
- data/vendor/datasketches-cpp/{tuple/include/array_of_doubles_intersection_impl.hpp → req/test/req_sketch_serialize_for_java.cpp} +12 -7
- data/vendor/datasketches-cpp/req/test/req_sketch_test.cpp +3 -89
- data/vendor/datasketches-cpp/sampling/CMakeLists.txt +4 -0
- data/vendor/datasketches-cpp/sampling/include/ebpps_sample.hpp +210 -0
- data/vendor/datasketches-cpp/sampling/include/ebpps_sample_impl.hpp +535 -0
- data/vendor/datasketches-cpp/sampling/include/ebpps_sketch.hpp +281 -0
- data/vendor/datasketches-cpp/sampling/include/ebpps_sketch_impl.hpp +531 -0
- data/vendor/datasketches-cpp/sampling/include/var_opt_sketch.hpp +89 -32
- data/vendor/datasketches-cpp/sampling/include/var_opt_sketch_impl.hpp +33 -19
- data/vendor/datasketches-cpp/sampling/include/var_opt_union.hpp +13 -10
- data/vendor/datasketches-cpp/sampling/include/var_opt_union_impl.hpp +23 -19
- data/vendor/datasketches-cpp/sampling/test/CMakeLists.txt +55 -8
- data/vendor/datasketches-cpp/sampling/test/ebpps_allocation_test.cpp +96 -0
- data/vendor/datasketches-cpp/sampling/test/ebpps_sample_test.cpp +137 -0
- data/vendor/datasketches-cpp/sampling/test/ebpps_sketch_test.cpp +266 -0
- data/vendor/datasketches-cpp/sampling/test/var_opt_sketch_deserialize_from_java_test.cpp +81 -0
- data/vendor/datasketches-cpp/sampling/test/var_opt_sketch_serialize_for_java.cpp +54 -0
- data/vendor/datasketches-cpp/sampling/test/var_opt_sketch_test.cpp +33 -51
- data/vendor/datasketches-cpp/sampling/test/var_opt_union_deserialize_from_java_test.cpp +50 -0
- data/vendor/datasketches-cpp/sampling/test/var_opt_union_serialize_for_java.cpp +56 -0
- data/vendor/datasketches-cpp/sampling/test/var_opt_union_test.cpp +0 -20
- data/vendor/datasketches-cpp/theta/CMakeLists.txt +1 -0
- data/vendor/datasketches-cpp/theta/include/bit_packing.hpp +6279 -0
- data/vendor/datasketches-cpp/theta/include/bounds_on_ratios_in_sampled_sets.hpp +1 -0
- data/vendor/datasketches-cpp/theta/include/bounds_on_ratios_in_theta_sketched_sets.hpp +7 -6
- data/vendor/datasketches-cpp/theta/include/compact_theta_sketch_parser.hpp +14 -8
- data/vendor/datasketches-cpp/theta/include/compact_theta_sketch_parser_impl.hpp +60 -46
- data/vendor/datasketches-cpp/theta/include/theta_a_not_b.hpp +20 -5
- data/vendor/datasketches-cpp/theta/include/theta_constants.hpp +10 -4
- data/vendor/datasketches-cpp/theta/include/theta_helpers.hpp +3 -1
- data/vendor/datasketches-cpp/theta/include/theta_intersection.hpp +13 -5
- data/vendor/datasketches-cpp/theta/include/theta_intersection_base_impl.hpp +5 -5
- data/vendor/datasketches-cpp/theta/include/theta_intersection_impl.hpp +3 -3
- data/vendor/datasketches-cpp/theta/include/theta_jaccard_similarity.hpp +2 -1
- data/vendor/datasketches-cpp/theta/include/theta_jaccard_similarity_base.hpp +1 -0
- data/vendor/datasketches-cpp/theta/include/theta_set_difference_base_impl.hpp +1 -1
- data/vendor/datasketches-cpp/theta/include/theta_sketch.hpp +180 -33
- data/vendor/datasketches-cpp/theta/include/theta_sketch_impl.hpp +430 -130
- data/vendor/datasketches-cpp/theta/include/theta_union.hpp +17 -10
- data/vendor/datasketches-cpp/theta/include/theta_union_base_impl.hpp +10 -10
- data/vendor/datasketches-cpp/theta/include/theta_union_impl.hpp +3 -3
- data/vendor/datasketches-cpp/theta/include/theta_update_sketch_base.hpp +21 -6
- data/vendor/datasketches-cpp/theta/include/theta_update_sketch_base_impl.hpp +13 -3
- data/vendor/datasketches-cpp/theta/test/CMakeLists.txt +15 -1
- data/vendor/datasketches-cpp/theta/test/bit_packing_test.cpp +80 -0
- data/vendor/datasketches-cpp/theta/test/theta_sketch_deserialize_from_java_test.cpp +57 -0
- data/vendor/datasketches-cpp/theta/test/theta_sketch_serialize_for_java.cpp +61 -0
- data/vendor/datasketches-cpp/theta/test/theta_sketch_test.cpp +39 -188
- data/vendor/datasketches-cpp/theta/test/theta_union_test.cpp +25 -0
- data/vendor/datasketches-cpp/tuple/CMakeLists.txt +8 -7
- data/vendor/datasketches-cpp/tuple/include/array_of_doubles_sketch.hpp +19 -144
- data/vendor/datasketches-cpp/tuple/include/{array_of_doubles_a_not_b.hpp → array_tuple_a_not_b.hpp} +24 -16
- data/vendor/datasketches-cpp/tuple/include/{array_of_doubles_a_not_b_impl.hpp → array_tuple_a_not_b_impl.hpp} +4 -4
- data/vendor/datasketches-cpp/tuple/include/array_tuple_intersection.hpp +65 -0
- data/vendor/datasketches-cpp/tuple/include/array_tuple_intersection_impl.hpp +31 -0
- data/vendor/datasketches-cpp/tuple/include/array_tuple_sketch.hpp +237 -0
- data/vendor/datasketches-cpp/tuple/include/{array_of_doubles_sketch_impl.hpp → array_tuple_sketch_impl.hpp} +40 -41
- data/vendor/datasketches-cpp/tuple/include/array_tuple_union.hpp +81 -0
- data/vendor/datasketches-cpp/tuple/include/array_tuple_union_impl.hpp +43 -0
- data/vendor/datasketches-cpp/tuple/include/tuple_a_not_b.hpp +11 -2
- data/vendor/datasketches-cpp/tuple/include/tuple_intersection.hpp +17 -10
- data/vendor/datasketches-cpp/tuple/include/tuple_jaccard_similarity.hpp +2 -1
- data/vendor/datasketches-cpp/tuple/include/tuple_sketch.hpp +95 -32
- data/vendor/datasketches-cpp/tuple/include/tuple_sketch_impl.hpp +2 -1
- data/vendor/datasketches-cpp/tuple/include/tuple_union.hpp +19 -11
- data/vendor/datasketches-cpp/tuple/test/CMakeLists.txt +16 -1
- data/vendor/datasketches-cpp/tuple/test/aod_sketch_deserialize_from_java_test.cpp +76 -0
- data/vendor/datasketches-cpp/tuple/test/aod_sketch_serialize_for_java.cpp +62 -0
- data/vendor/datasketches-cpp/tuple/test/array_of_doubles_sketch_test.cpp +5 -129
- data/vendor/datasketches-cpp/tuple/test/engagement_test.cpp +85 -89
- data/vendor/datasketches-cpp/tuple/test/tuple_jaccard_similarity_test.cpp +3 -1
- data/vendor/datasketches-cpp/tuple/test/tuple_sketch_deserialize_from_java_test.cpp +47 -0
- data/vendor/datasketches-cpp/{python/src/datasketches.cpp → tuple/test/tuple_sketch_serialize_for_java.cpp} +16 -30
- data/vendor/datasketches-cpp/tuple/test/tuple_sketch_test.cpp +1 -1
- data/vendor/datasketches-cpp/version.cfg.in +1 -1
- metadata +61 -79
- data/vendor/datasketches-cpp/fi/test/items_sketch_string_from_java.sk +0 -0
- data/vendor/datasketches-cpp/fi/test/items_sketch_string_utf8_from_java.sk +0 -0
- data/vendor/datasketches-cpp/fi/test/longs_sketch_from_java.sk +0 -0
- data/vendor/datasketches-cpp/hll/test/array6_from_java.sk +0 -0
- data/vendor/datasketches-cpp/hll/test/compact_array4_from_java.sk +0 -0
- data/vendor/datasketches-cpp/hll/test/compact_set_from_java.sk +0 -0
- data/vendor/datasketches-cpp/hll/test/list_from_java.sk +0 -0
- data/vendor/datasketches-cpp/hll/test/updatable_array4_from_java.sk +0 -0
- data/vendor/datasketches-cpp/hll/test/updatable_set_from_java.sk +0 -0
- data/vendor/datasketches-cpp/kll/test/kll_sketch_from_java.sk +0 -0
- data/vendor/datasketches-cpp/pyproject.toml +0 -23
- data/vendor/datasketches-cpp/python/CMakeLists.txt +0 -81
- data/vendor/datasketches-cpp/python/README.md +0 -85
- data/vendor/datasketches-cpp/python/datasketches/PySerDe.py +0 -104
- data/vendor/datasketches-cpp/python/include/py_serde.hpp +0 -113
- data/vendor/datasketches-cpp/python/jupyter/CPCSketch.ipynb +0 -345
- data/vendor/datasketches-cpp/python/jupyter/FrequentItemsSketch.ipynb +0 -354
- data/vendor/datasketches-cpp/python/jupyter/HLLSketch.ipynb +0 -346
- data/vendor/datasketches-cpp/python/jupyter/KLLSketch.ipynb +0 -463
- data/vendor/datasketches-cpp/python/jupyter/ThetaSketchNotebook.ipynb +0 -403
- data/vendor/datasketches-cpp/python/pybind11Path.cmd +0 -21
- data/vendor/datasketches-cpp/python/src/cpc_wrapper.cpp +0 -90
- data/vendor/datasketches-cpp/python/src/fi_wrapper.cpp +0 -128
- data/vendor/datasketches-cpp/python/src/hll_wrapper.cpp +0 -134
- data/vendor/datasketches-cpp/python/src/kll_wrapper.cpp +0 -210
- data/vendor/datasketches-cpp/python/src/ks_wrapper.cpp +0 -68
- data/vendor/datasketches-cpp/python/src/py_serde.cpp +0 -111
- data/vendor/datasketches-cpp/python/src/quantiles_wrapper.cpp +0 -204
- data/vendor/datasketches-cpp/python/src/req_wrapper.cpp +0 -215
- data/vendor/datasketches-cpp/python/src/theta_wrapper.cpp +0 -172
- data/vendor/datasketches-cpp/python/src/vector_of_kll.cpp +0 -490
- data/vendor/datasketches-cpp/python/src/vo_wrapper.cpp +0 -173
- data/vendor/datasketches-cpp/python/tests/__init__.py +0 -16
- data/vendor/datasketches-cpp/python/tests/cpc_test.py +0 -64
- data/vendor/datasketches-cpp/python/tests/fi_test.py +0 -110
- data/vendor/datasketches-cpp/python/tests/hll_test.py +0 -130
- data/vendor/datasketches-cpp/python/tests/kll_test.py +0 -125
- data/vendor/datasketches-cpp/python/tests/quantiles_test.py +0 -126
- data/vendor/datasketches-cpp/python/tests/req_test.py +0 -126
- data/vendor/datasketches-cpp/python/tests/theta_test.py +0 -146
- data/vendor/datasketches-cpp/python/tests/vector_of_kll_test.py +0 -148
- data/vendor/datasketches-cpp/python/tests/vo_test.py +0 -125
- data/vendor/datasketches-cpp/req/test/req_float_empty_from_java.sk +0 -0
- data/vendor/datasketches-cpp/req/test/req_float_estimation_from_java.sk +0 -0
- data/vendor/datasketches-cpp/req/test/req_float_exact_from_java.sk +0 -0
- data/vendor/datasketches-cpp/req/test/req_float_raw_items_from_java.sk +0 -0
- data/vendor/datasketches-cpp/req/test/req_float_single_item_from_java.sk +0 -0
- data/vendor/datasketches-cpp/sampling/test/binaries_from_java.txt +0 -67
- data/vendor/datasketches-cpp/sampling/test/varopt_sketch_long_sampling.sk +0 -0
- data/vendor/datasketches-cpp/sampling/test/varopt_sketch_string_exact.sk +0 -0
- data/vendor/datasketches-cpp/sampling/test/varopt_union_double_sampling.sk +0 -0
- data/vendor/datasketches-cpp/setup.py +0 -110
- data/vendor/datasketches-cpp/theta/test/theta_compact_empty_from_java.sk +0 -0
- data/vendor/datasketches-cpp/theta/test/theta_compact_estimation_from_java.sk +0 -0
- data/vendor/datasketches-cpp/theta/test/theta_compact_exact_from_java.sk +0 -0
- data/vendor/datasketches-cpp/theta/test/theta_compact_single_item_from_java.sk +0 -0
- data/vendor/datasketches-cpp/tuple/include/array_of_doubles_intersection.hpp +0 -52
- data/vendor/datasketches-cpp/tuple/include/array_of_doubles_union.hpp +0 -81
- data/vendor/datasketches-cpp/tuple/include/array_of_doubles_union_impl.hpp +0 -43
- data/vendor/datasketches-cpp/tuple/test/aod_1_compact_empty_from_java.sk +0 -1
- data/vendor/datasketches-cpp/tuple/test/aod_1_compact_estimation_from_java.sk +0 -0
- data/vendor/datasketches-cpp/tuple/test/aod_1_compact_non_empty_no_entries_from_java.sk +0 -0
- data/vendor/datasketches-cpp/tuple/test/aod_2_compact_exact_from_java.sk +0 -0
- data/vendor/datasketches-cpp/tuple/test/aod_3_compact_empty_from_java.sk +0 -1
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/*
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* Licensed to the Apache Software Foundation (ASF) under one
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* or more contributor license agreements. See the NOTICE file
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* distributed with this work for additional information
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* regarding copyright ownership. The ASF licenses this file
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* to you under the Apache License, Version 2.0 (the
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* "License"); you may not use this file except in compliance
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* with the License. You may obtain a copy of the License at
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* http://www.apache.org/licenses/LICENSE-2.0
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*
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* Unless required by applicable law or agreed to in writing,
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* software distributed under the License is distributed on an
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* "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
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* KIND, either express or implied. See the License for the
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* specific language governing permissions and limitations
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* under the License.
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*/
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#ifndef COUNT_MIN_IMPL_HPP_
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#define COUNT_MIN_IMPL_HPP_
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#include <algorithm>
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#include <iomanip>
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#include <random>
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#include <sstream>
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#include "MurmurHash3.h"
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#include "count_min.hpp"
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#include "memory_operations.hpp"
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namespace datasketches {
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template<typename W, typename A>
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count_min_sketch<W,A>::count_min_sketch(uint8_t num_hashes, uint32_t num_buckets, uint64_t seed, const A& allocator):
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+
_seed(seed),
|
41
|
+
_total_weight(0) {
|
42
|
+
if (num_buckets < 3) throw std::invalid_argument("Using fewer than 3 buckets incurs relative error greater than 1.");
|
43
|
+
|
44
|
+
// This check is to ensure later compatibility with a Java implementation whose maximum size can only
|
45
|
+
// be 2^31-1. We check only against 2^30 for simplicity.
|
46
|
+
if (num_buckets * num_hashes >= 1 << 30) {
|
47
|
+
throw std::invalid_argument("These parameters generate a sketch that exceeds 2^30 elements."
|
48
|
+
"Try reducing either the number of buckets or the number of hash functions.");
|
49
|
+
}
|
50
|
+
|
51
|
+
std::default_random_engine rng(_seed);
|
52
|
+
std::uniform_int_distribution<uint64_t> extra_hash_seeds(0, std::numeric_limits<uint64_t>::max());
|
53
|
+
hash_seeds.reserve(num_hashes);
|
54
|
+
|
55
|
+
for (uint64_t i=0; i < num_hashes; ++i) {
|
56
|
+
hash_seeds.push_back(extra_hash_seeds(rng) + _seed); // Adds the global seed to all hash functions.
|
57
|
+
}
|
58
|
+
}
|
59
|
+
|
60
|
+
template<typename W, typename A>
|
61
|
+
uint8_t count_min_sketch<W,A>::get_num_hashes() const {
|
62
|
+
return _num_hashes;
|
63
|
+
}
|
64
|
+
|
65
|
+
template<typename W, typename A>
|
66
|
+
uint32_t count_min_sketch<W,A>::get_num_buckets() const {
|
67
|
+
return _num_buckets;
|
68
|
+
}
|
69
|
+
|
70
|
+
template<typename W, typename A>
|
71
|
+
uint64_t count_min_sketch<W,A>::get_seed() const {
|
72
|
+
return _seed;
|
73
|
+
}
|
74
|
+
|
75
|
+
template<typename W, typename A>
|
76
|
+
double count_min_sketch<W,A>::get_relative_error() const {
|
77
|
+
return exp(1.0) / double(_num_buckets);
|
78
|
+
}
|
79
|
+
|
80
|
+
template<typename W, typename A>
|
81
|
+
W count_min_sketch<W,A>::get_total_weight() const {
|
82
|
+
return _total_weight;
|
83
|
+
}
|
84
|
+
|
85
|
+
template<typename W, typename A>
|
86
|
+
uint32_t count_min_sketch<W,A>::suggest_num_buckets(double relative_error) {
|
87
|
+
/*
|
88
|
+
* Function to help users select a number of buckets for a given error.
|
89
|
+
* TODO: Change this when we use only power of 2 buckets.
|
90
|
+
*/
|
91
|
+
if (relative_error < 0.) {
|
92
|
+
throw std::invalid_argument("Relative error must be at least 0.");
|
93
|
+
}
|
94
|
+
return static_cast<uint32_t>(ceil(exp(1.0) / relative_error));
|
95
|
+
}
|
96
|
+
|
97
|
+
template<typename W, typename A>
|
98
|
+
uint8_t count_min_sketch<W,A>::suggest_num_hashes(double confidence) {
|
99
|
+
/*
|
100
|
+
* Function to help users select a number of hashes for a given confidence
|
101
|
+
* e.g. confidence = 1 - failure probability
|
102
|
+
* failure probability == delta in the literature.
|
103
|
+
*/
|
104
|
+
if (confidence < 0. || confidence > 1.0) {
|
105
|
+
throw std::invalid_argument("Confidence must be between 0 and 1.0 (inclusive).");
|
106
|
+
}
|
107
|
+
return std::min<uint8_t>(ceil(log(1.0 / (1.0 - confidence))), UINT8_MAX);
|
108
|
+
}
|
109
|
+
|
110
|
+
template<typename W, typename A>
|
111
|
+
std::vector<uint64_t> count_min_sketch<W,A>::get_hashes(const void* item, size_t size) const {
|
112
|
+
/*
|
113
|
+
* Returns the hash locations for the input item using the original hashing
|
114
|
+
* scheme from [1].
|
115
|
+
* Generate _num_hashes separate hashes from calls to murmurmhash.
|
116
|
+
* This could be optimized by keeping both of the 64bit parts of the hash
|
117
|
+
* function, rather than generating a new one for every level.
|
118
|
+
*
|
119
|
+
*
|
120
|
+
* Postscript.
|
121
|
+
* Note that a tradeoff can be achieved over the update time and space
|
122
|
+
* complexity of the sketch by using a combinatorial hashing scheme from
|
123
|
+
* https://github.com/Claudenw/BloomFilter/wiki/Bloom-Filters----An-overview
|
124
|
+
* https://www.eecs.harvard.edu/~michaelm/postscripts/tr-02-05.pdf
|
125
|
+
*/
|
126
|
+
uint64_t bucket_index;
|
127
|
+
std::vector<uint64_t> sketch_update_locations;
|
128
|
+
sketch_update_locations.reserve(_num_hashes);
|
129
|
+
|
130
|
+
uint64_t hash_seed_index = 0;
|
131
|
+
for (const auto &it: hash_seeds) {
|
132
|
+
HashState hashes;
|
133
|
+
MurmurHash3_x64_128(item, size, it, hashes); // ? BEWARE OVERFLOW.
|
134
|
+
uint64_t hash = hashes.h1;
|
135
|
+
bucket_index = hash % _num_buckets;
|
136
|
+
sketch_update_locations.push_back((hash_seed_index * _num_buckets) + bucket_index);
|
137
|
+
hash_seed_index += 1;
|
138
|
+
}
|
139
|
+
return sketch_update_locations;
|
140
|
+
}
|
141
|
+
|
142
|
+
template<typename W, typename A>
|
143
|
+
W count_min_sketch<W,A>::get_estimate(uint64_t item) const {return get_estimate(&item, sizeof(item));}
|
144
|
+
|
145
|
+
template<typename W, typename A>
|
146
|
+
W count_min_sketch<W,A>::get_estimate(int64_t item) const {return get_estimate(&item, sizeof(item));}
|
147
|
+
|
148
|
+
template<typename W, typename A>
|
149
|
+
W count_min_sketch<W,A>::get_estimate(const std::string& item) const {
|
150
|
+
if (item.empty()) return 0; // Empty strings are not inserted into the sketch.
|
151
|
+
return get_estimate(item.c_str(), item.length());
|
152
|
+
}
|
153
|
+
|
154
|
+
template<typename W, typename A>
|
155
|
+
W count_min_sketch<W,A>::get_estimate(const void* item, size_t size) const {
|
156
|
+
/*
|
157
|
+
* Returns the estimated frequency of the item
|
158
|
+
*/
|
159
|
+
std::vector<uint64_t> hash_locations = get_hashes(item, size);
|
160
|
+
std::vector<W> estimates;
|
161
|
+
for (const auto h: hash_locations) {
|
162
|
+
estimates.push_back(_sketch_array[h]);
|
163
|
+
}
|
164
|
+
return *std::min_element(estimates.begin(), estimates.end());
|
165
|
+
}
|
166
|
+
|
167
|
+
template<typename W, typename A>
|
168
|
+
void count_min_sketch<W,A>::update(uint64_t item, W weight) {
|
169
|
+
update(&item, sizeof(item), weight);
|
170
|
+
}
|
171
|
+
|
172
|
+
template<typename W, typename A>
|
173
|
+
void count_min_sketch<W,A>::update(int64_t item, W weight) {
|
174
|
+
update(&item, sizeof(item), weight);
|
175
|
+
}
|
176
|
+
|
177
|
+
template<typename W, typename A>
|
178
|
+
void count_min_sketch<W,A>::update(const std::string& item, W weight) {
|
179
|
+
if (item.empty()) return;
|
180
|
+
update(item.c_str(), item.length(), weight);
|
181
|
+
}
|
182
|
+
|
183
|
+
template<typename W, typename A>
|
184
|
+
void count_min_sketch<W,A>::update(const void* item, size_t size, W weight) {
|
185
|
+
/*
|
186
|
+
* Gets the item's hash locations and then increments the sketch in those
|
187
|
+
* locations by the weight.
|
188
|
+
*/
|
189
|
+
_total_weight += weight >= 0 ? weight : -weight;
|
190
|
+
std::vector<uint64_t> hash_locations = get_hashes(item, size);
|
191
|
+
for (const auto h: hash_locations) {
|
192
|
+
_sketch_array[h] += weight;
|
193
|
+
}
|
194
|
+
}
|
195
|
+
|
196
|
+
template<typename W, typename A>
|
197
|
+
W count_min_sketch<W,A>::get_upper_bound(uint64_t item) const {return get_upper_bound(&item, sizeof(item));}
|
198
|
+
|
199
|
+
template<typename W, typename A>
|
200
|
+
W count_min_sketch<W,A>::get_upper_bound(int64_t item) const {return get_upper_bound(&item, sizeof(item));}
|
201
|
+
|
202
|
+
template<typename W, typename A>
|
203
|
+
W count_min_sketch<W,A>::get_upper_bound(const std::string& item) const {
|
204
|
+
if (item.empty()) return 0; // Empty strings are not inserted into the sketch.
|
205
|
+
return get_upper_bound(item.c_str(), item.length());
|
206
|
+
}
|
207
|
+
|
208
|
+
template<typename W, typename A>
|
209
|
+
W count_min_sketch<W,A>::get_upper_bound(const void* item, size_t size) const {
|
210
|
+
return static_cast<W>(get_estimate(item, size) + get_relative_error() * get_total_weight());
|
211
|
+
}
|
212
|
+
|
213
|
+
template<typename W, typename A>
|
214
|
+
W count_min_sketch<W,A>::get_lower_bound(uint64_t item) const {return get_lower_bound(&item, sizeof(item));}
|
215
|
+
|
216
|
+
template<typename W, typename A>
|
217
|
+
W count_min_sketch<W,A>::get_lower_bound(int64_t item) const {return get_lower_bound(&item, sizeof(item));}
|
218
|
+
|
219
|
+
template<typename W, typename A>
|
220
|
+
W count_min_sketch<W,A>::get_lower_bound(const std::string& item) const {
|
221
|
+
if (item.empty()) return 0; // Empty strings are not inserted into the sketch.
|
222
|
+
return get_lower_bound(item.c_str(), item.length());
|
223
|
+
}
|
224
|
+
|
225
|
+
template<typename W, typename A>
|
226
|
+
W count_min_sketch<W,A>::get_lower_bound(const void* item, size_t size) const {
|
227
|
+
return get_estimate(item, size);
|
228
|
+
}
|
229
|
+
|
230
|
+
template<typename W, typename A>
|
231
|
+
void count_min_sketch<W,A>::merge(const count_min_sketch &other_sketch) {
|
232
|
+
/*
|
233
|
+
* Merges this sketch into other_sketch sketch by elementwise summing of buckets
|
234
|
+
*/
|
235
|
+
if (this == &other_sketch) {
|
236
|
+
throw std::invalid_argument( "Cannot merge a sketch with itself." );
|
237
|
+
}
|
238
|
+
|
239
|
+
bool acceptable_config =
|
240
|
+
(get_num_hashes() == other_sketch.get_num_hashes()) &&
|
241
|
+
(get_num_buckets() == other_sketch.get_num_buckets()) &&
|
242
|
+
(get_seed() == other_sketch.get_seed());
|
243
|
+
if (!acceptable_config) {
|
244
|
+
throw std::invalid_argument( "Incompatible sketch configuration." );
|
245
|
+
}
|
246
|
+
|
247
|
+
// Merge step - iterate over the other vector and add the weights to this sketch
|
248
|
+
auto it = _sketch_array.begin(); // This is a std::vector iterator.
|
249
|
+
auto other_it = other_sketch.begin(); //This is a const iterator over the other sketch.
|
250
|
+
while (it != _sketch_array.end()) {
|
251
|
+
*it += *other_it;
|
252
|
+
++it;
|
253
|
+
++other_it;
|
254
|
+
}
|
255
|
+
_total_weight += other_sketch.get_total_weight();
|
256
|
+
}
|
257
|
+
|
258
|
+
// Iterators
|
259
|
+
template<typename W, typename A>
|
260
|
+
typename count_min_sketch<W,A>::const_iterator count_min_sketch<W,A>::begin() const {
|
261
|
+
return _sketch_array.begin();
|
262
|
+
}
|
263
|
+
|
264
|
+
template<typename W, typename A>
|
265
|
+
typename count_min_sketch<W,A>::const_iterator count_min_sketch<W,A>::end() const {
|
266
|
+
return _sketch_array.end();
|
267
|
+
}
|
268
|
+
|
269
|
+
template<typename W, typename A>
|
270
|
+
void count_min_sketch<W,A>::serialize(std::ostream& os) const {
|
271
|
+
// Long 0
|
272
|
+
//const uint8_t preamble_longs = is_empty() ? PREAMBLE_LONGS_SHORT : PREAMBLE_LONGS_FULL;
|
273
|
+
const uint8_t preamble_longs = PREAMBLE_LONGS_SHORT;
|
274
|
+
const uint8_t ser_ver = SERIAL_VERSION_1;
|
275
|
+
const uint8_t family_id = FAMILY_ID;
|
276
|
+
const uint8_t flags_byte = (is_empty() ? 1 << flags::IS_EMPTY : 0);
|
277
|
+
const uint32_t unused32 = NULL_32;
|
278
|
+
write(os, preamble_longs);
|
279
|
+
write(os, ser_ver);
|
280
|
+
write(os, family_id);
|
281
|
+
write(os, flags_byte);
|
282
|
+
write(os, unused32);
|
283
|
+
|
284
|
+
// Long 1
|
285
|
+
const uint32_t nbuckets = _num_buckets;
|
286
|
+
const uint8_t nhashes = _num_hashes;
|
287
|
+
const uint16_t seed_hash(compute_seed_hash(_seed));
|
288
|
+
const uint8_t unused8 = NULL_8;
|
289
|
+
write(os, nbuckets);
|
290
|
+
write(os, nhashes);
|
291
|
+
write(os, seed_hash);
|
292
|
+
write(os, unused8);
|
293
|
+
if (is_empty()) return; // sketch is empty, no need to write further bytes.
|
294
|
+
|
295
|
+
// Long 2
|
296
|
+
write(os, _total_weight);
|
297
|
+
|
298
|
+
// Long 3 onwards: remaining bytes are consumed by writing the weight and the array values.
|
299
|
+
auto it = _sketch_array.begin();
|
300
|
+
while (it != _sketch_array.end()) {
|
301
|
+
write(os, *it);
|
302
|
+
++it;
|
303
|
+
}
|
304
|
+
}
|
305
|
+
|
306
|
+
template<typename W, typename A>
|
307
|
+
auto count_min_sketch<W,A>::deserialize(std::istream& is, uint64_t seed, const A& allocator) -> count_min_sketch {
|
308
|
+
|
309
|
+
// First 8 bytes are 4 bytes of preamble and 4 unused bytes.
|
310
|
+
const auto preamble_longs = read<uint8_t>(is);
|
311
|
+
const auto serial_version = read<uint8_t>(is);
|
312
|
+
const auto family_id = read<uint8_t>(is);
|
313
|
+
const auto flags_byte = read<uint8_t>(is);
|
314
|
+
read<uint32_t>(is); // 4 unused bytes
|
315
|
+
|
316
|
+
check_header_validity(preamble_longs, serial_version, family_id, flags_byte);
|
317
|
+
|
318
|
+
// Sketch parameters
|
319
|
+
const auto nbuckets = read<uint32_t>(is);
|
320
|
+
const auto nhashes = read<uint8_t>(is);
|
321
|
+
const auto seed_hash = read<uint16_t>(is);
|
322
|
+
read<uint8_t>(is); // 1 unused byte
|
323
|
+
|
324
|
+
if (seed_hash != compute_seed_hash(seed)) {
|
325
|
+
throw std::invalid_argument("Incompatible seed hashes: " + std::to_string(seed_hash) + ", "
|
326
|
+
+ std::to_string(compute_seed_hash(seed)));
|
327
|
+
}
|
328
|
+
count_min_sketch c(nhashes, nbuckets, seed, allocator);
|
329
|
+
const bool is_empty = (flags_byte & (1 << flags::IS_EMPTY)) > 0;
|
330
|
+
if (is_empty == 1) return c; // sketch is empty, no need to read further.
|
331
|
+
|
332
|
+
// Set the sketch weight and read in the sketch values
|
333
|
+
const auto weight = read<W>(is);
|
334
|
+
c._total_weight += weight;
|
335
|
+
read(is, c._sketch_array.data(), sizeof(W) * c._sketch_array.size());
|
336
|
+
|
337
|
+
return c;
|
338
|
+
}
|
339
|
+
|
340
|
+
template<typename W, typename A>
|
341
|
+
size_t count_min_sketch<W,A>::get_serialized_size_bytes() const {
|
342
|
+
// The header is always 2 longs, whether empty or full
|
343
|
+
const size_t preamble_longs = PREAMBLE_LONGS_SHORT;
|
344
|
+
|
345
|
+
// If the sketch is empty, we're done. Otherwise, we need the total weight
|
346
|
+
// held by the sketch as well as a data table of size (num_buckets * num_hashes)
|
347
|
+
return (preamble_longs * sizeof(uint64_t)) + (is_empty() ? 0 : sizeof(W) * (1 + _num_buckets * _num_hashes));
|
348
|
+
}
|
349
|
+
|
350
|
+
template<typename W, typename A>
|
351
|
+
auto count_min_sketch<W,A>::serialize(unsigned header_size_bytes) const -> vector_bytes {
|
352
|
+
vector_bytes bytes(header_size_bytes + get_serialized_size_bytes(), 0, _allocator);
|
353
|
+
uint8_t *ptr = bytes.data() + header_size_bytes;
|
354
|
+
|
355
|
+
// Long 0
|
356
|
+
const uint8_t preamble_longs = PREAMBLE_LONGS_SHORT;
|
357
|
+
ptr += copy_to_mem(preamble_longs, ptr);
|
358
|
+
const uint8_t ser_ver = SERIAL_VERSION_1;
|
359
|
+
ptr += copy_to_mem(ser_ver, ptr);
|
360
|
+
const uint8_t family_id = FAMILY_ID;
|
361
|
+
ptr += copy_to_mem(family_id, ptr);
|
362
|
+
const uint8_t flags_byte = (is_empty() ? 1 << flags::IS_EMPTY : 0);
|
363
|
+
ptr += copy_to_mem(flags_byte, ptr);
|
364
|
+
const uint32_t unused32 = NULL_32;
|
365
|
+
ptr += copy_to_mem(unused32, ptr);
|
366
|
+
|
367
|
+
// Long 1
|
368
|
+
const uint32_t nbuckets = _num_buckets;
|
369
|
+
const uint8_t nhashes = _num_hashes;
|
370
|
+
const uint16_t seed_hash(compute_seed_hash(_seed));
|
371
|
+
const uint8_t null_characters_8 = NULL_8;
|
372
|
+
ptr += copy_to_mem(nbuckets, ptr);
|
373
|
+
ptr += copy_to_mem(nhashes, ptr);
|
374
|
+
ptr += copy_to_mem(seed_hash, ptr);
|
375
|
+
ptr += copy_to_mem(null_characters_8, ptr);
|
376
|
+
if (is_empty()) return bytes; // sketch is empty, no need to write further bytes.
|
377
|
+
|
378
|
+
// Long 2
|
379
|
+
const W t_weight = _total_weight;
|
380
|
+
ptr += copy_to_mem(t_weight, ptr);
|
381
|
+
|
382
|
+
// Long 3 onwards: remaining bytes are consumed by writing the weight and the array values.
|
383
|
+
auto it = _sketch_array.begin();
|
384
|
+
while (it != _sketch_array.end()) {
|
385
|
+
ptr += copy_to_mem(*it, ptr);
|
386
|
+
++it;
|
387
|
+
}
|
388
|
+
|
389
|
+
return bytes;
|
390
|
+
}
|
391
|
+
|
392
|
+
template<typename W, typename A>
|
393
|
+
auto count_min_sketch<W,A>::deserialize(const void* bytes, size_t size, uint64_t seed, const A& allocator) -> count_min_sketch {
|
394
|
+
ensure_minimum_memory(size, PREAMBLE_LONGS_SHORT * sizeof(uint64_t));
|
395
|
+
|
396
|
+
const char* ptr = static_cast<const char*>(bytes);
|
397
|
+
|
398
|
+
// First 8 bytes are 4 bytes of preamble and 4 unused bytes.
|
399
|
+
uint8_t preamble_longs;
|
400
|
+
ptr += copy_from_mem(ptr, preamble_longs);
|
401
|
+
uint8_t serial_version;
|
402
|
+
ptr += copy_from_mem(ptr, serial_version);
|
403
|
+
uint8_t family_id;
|
404
|
+
ptr += copy_from_mem(ptr, family_id);
|
405
|
+
uint8_t flags_byte;
|
406
|
+
ptr += copy_from_mem(ptr, flags_byte);
|
407
|
+
ptr += sizeof(uint32_t);
|
408
|
+
|
409
|
+
check_header_validity(preamble_longs, serial_version, family_id, flags_byte);
|
410
|
+
|
411
|
+
// Second 8 bytes are the sketch parameters with a final, unused byte.
|
412
|
+
uint32_t nbuckets;
|
413
|
+
uint8_t nhashes;
|
414
|
+
uint16_t seed_hash;
|
415
|
+
ptr += copy_from_mem(ptr, nbuckets);
|
416
|
+
ptr += copy_from_mem(ptr, nhashes);
|
417
|
+
ptr += copy_from_mem(ptr, seed_hash);
|
418
|
+
ptr += sizeof(uint8_t);
|
419
|
+
|
420
|
+
if (seed_hash != compute_seed_hash(seed)) {
|
421
|
+
throw std::invalid_argument("Incompatible seed hashes: " + std::to_string(seed_hash) + ", "
|
422
|
+
+ std::to_string(compute_seed_hash(seed)));
|
423
|
+
}
|
424
|
+
count_min_sketch c(nhashes, nbuckets, seed, allocator);
|
425
|
+
const bool is_empty = (flags_byte & (1 << flags::IS_EMPTY)) > 0;
|
426
|
+
if (is_empty) return c; // sketch is empty, no need to read further.
|
427
|
+
|
428
|
+
ensure_minimum_memory(size, sizeof(W) * (1 + nbuckets * nhashes));
|
429
|
+
|
430
|
+
// Long 2 is the weight.
|
431
|
+
W weight;
|
432
|
+
ptr += copy_from_mem(ptr, weight);
|
433
|
+
c._total_weight += weight;
|
434
|
+
|
435
|
+
// All remaining bytes are the sketch table entries.
|
436
|
+
for (size_t i = 0; i<c._num_buckets*c._num_hashes; ++i) {
|
437
|
+
ptr += copy_from_mem(ptr, c._sketch_array[i]);
|
438
|
+
}
|
439
|
+
return c;
|
440
|
+
}
|
441
|
+
|
442
|
+
template<typename W, typename A>
|
443
|
+
bool count_min_sketch<W,A>::is_empty() const {
|
444
|
+
return _total_weight == 0;
|
445
|
+
}
|
446
|
+
|
447
|
+
template<typename W, typename A>
|
448
|
+
string<A> count_min_sketch<W,A>::to_string() const {
|
449
|
+
// count the number of used entries in the sketch
|
450
|
+
uint64_t num_nonzero = 0;
|
451
|
+
for (const auto entry: _sketch_array) {
|
452
|
+
if (entry != static_cast<W>(0.0))
|
453
|
+
++num_nonzero;
|
454
|
+
}
|
455
|
+
|
456
|
+
// Using a temporary stream for implementation here does not comply with AllocatorAwareContainer requirements.
|
457
|
+
// The stream does not support passing an allocator instance, and alternatives are complicated.
|
458
|
+
std::ostringstream os;
|
459
|
+
os << "### Count Min sketch summary:" << std::endl;
|
460
|
+
os << " num hashes : " << static_cast<uint32_t>(_num_hashes) << std::endl;
|
461
|
+
os << " num buckets : " << _num_buckets << std::endl;
|
462
|
+
os << " capacity bins : " << _sketch_array.size() << std::endl;
|
463
|
+
os << " filled bins : " << num_nonzero << std::endl;
|
464
|
+
os << " pct filled : " << std::setprecision(3) << (num_nonzero * 100.0) / _sketch_array.size() << "%" << std::endl;
|
465
|
+
os << "### End sketch summary" << std::endl;
|
466
|
+
|
467
|
+
return string<A>(os.str().c_str(), _allocator);
|
468
|
+
}
|
469
|
+
|
470
|
+
template<typename W, typename A>
|
471
|
+
void count_min_sketch<W,A>::check_header_validity(uint8_t preamble_longs, uint8_t serial_version, uint8_t family_id, uint8_t flags_byte) {
|
472
|
+
const bool empty = (flags_byte & (1 << flags::IS_EMPTY)) > 0;
|
473
|
+
|
474
|
+
const uint8_t sw = (empty ? 1 : 0) + (2 * serial_version) + (4 * family_id) + (32 * (preamble_longs & 0x3F));
|
475
|
+
bool valid = true;
|
476
|
+
|
477
|
+
switch (sw) { // exhaustive list and description of all valid cases
|
478
|
+
case 138 : break; // !empty, ser_ver==1, family==18, preLongs=2;
|
479
|
+
case 139 : break; // empty, ser_ver==1, family==18, preLongs=2;
|
480
|
+
//case 170 : break; // !empty, ser_ver==1, family==18, preLongs=3;
|
481
|
+
default : // all other case values are invalid
|
482
|
+
valid = false;
|
483
|
+
}
|
484
|
+
|
485
|
+
if (!valid) {
|
486
|
+
std::ostringstream os;
|
487
|
+
os << "Possible sketch corruption. Inconsistent state: "
|
488
|
+
<< "preamble_longs = " << static_cast<uint32_t>(preamble_longs)
|
489
|
+
<< ", empty = " << (empty ? "true" : "false")
|
490
|
+
<< ", serialization_version = " << static_cast<uint32_t>(serial_version);
|
491
|
+
throw std::invalid_argument(os.str());
|
492
|
+
}
|
493
|
+
}
|
494
|
+
|
495
|
+
} /* namespace datasketches */
|
496
|
+
|
497
|
+
#endif
|
@@ -15,25 +15,28 @@
|
|
15
15
|
# specific language governing permissions and limitations
|
16
16
|
# under the License.
|
17
17
|
|
18
|
-
|
19
|
-
global-include *.cpp
|
20
|
-
global-include *.c
|
21
|
-
global-include *.hpp
|
22
|
-
global-include *.h
|
23
|
-
global-include *.bin
|
24
|
-
global-include *.in
|
18
|
+
add_executable(count_min_test)
|
25
19
|
|
26
|
-
|
27
|
-
graft common
|
28
|
-
graft cpc
|
29
|
-
graft fi
|
30
|
-
graft hll
|
31
|
-
graft kll
|
32
|
-
graft req
|
33
|
-
graft theta
|
34
|
-
graft tuple
|
35
|
-
graft sampling
|
36
|
-
graft python
|
20
|
+
target_link_libraries(count_min_test count common_test_lib)
|
37
21
|
|
38
|
-
|
39
|
-
|
22
|
+
set_target_properties(count_min_test PROPERTIES
|
23
|
+
CXX_STANDARD_REQUIRED YES
|
24
|
+
)
|
25
|
+
|
26
|
+
file(TO_CMAKE_PATH "${CMAKE_CURRENT_SOURCE_DIR}" COUNT_TEST_BINARY_PATH)
|
27
|
+
string(APPEND COUNT_TEST_BINARY_PATH "/")
|
28
|
+
target_compile_definitions(count_min_test
|
29
|
+
PRIVATE
|
30
|
+
TEST_BINARY_INPUT_PATH="${COUNT_TEST_BINARY_PATH}"
|
31
|
+
)
|
32
|
+
|
33
|
+
add_test(
|
34
|
+
NAME count_min_test
|
35
|
+
COMMAND count_min_test
|
36
|
+
)
|
37
|
+
|
38
|
+
target_sources(count_min_test
|
39
|
+
PRIVATE
|
40
|
+
count_min_test.cpp
|
41
|
+
count_min_allocation_test.cpp
|
42
|
+
)
|
@@ -0,0 +1,155 @@
|
|
1
|
+
/*
|
2
|
+
* Licensed to the Apache Software Foundation (ASF) under one
|
3
|
+
* or more contributor license agreements. See the NOTICE file
|
4
|
+
* distributed with this work for additional information
|
5
|
+
* regarding copyright ownership. The ASF licenses this file
|
6
|
+
* to you under the Apache License, Version 2.0 (the
|
7
|
+
* "License"); you may not use this file except in compliance
|
8
|
+
* with the License. You may obtain a copy of the License at
|
9
|
+
*
|
10
|
+
* http://www.apache.org/licenses/LICENSE-2.0
|
11
|
+
*
|
12
|
+
* Unless required by applicable law or agreed to in writing,
|
13
|
+
* software distributed under the License is distributed on an
|
14
|
+
* "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
|
15
|
+
* KIND, either express or implied. See the License for the
|
16
|
+
* specific language governing permissions and limitations
|
17
|
+
* under the License.
|
18
|
+
*/
|
19
|
+
|
20
|
+
#include <catch2/catch.hpp>
|
21
|
+
#include <vector>
|
22
|
+
#include <cstring>
|
23
|
+
#include <sstream>
|
24
|
+
#include <fstream>
|
25
|
+
|
26
|
+
#include "count_min.hpp"
|
27
|
+
#include "common_defs.hpp"
|
28
|
+
#include "test_allocator.hpp"
|
29
|
+
|
30
|
+
namespace datasketches {
|
31
|
+
|
32
|
+
using count_min_sketch_test_alloc = count_min_sketch<uint64_t, test_allocator<uint64_t>>;
|
33
|
+
using alloc = test_allocator<uint64_t>;
|
34
|
+
|
35
|
+
TEST_CASE("CountMin sketch test allocator: serialize-deserialize empty", "[cm_sketch_alloc]") {
|
36
|
+
test_allocator_total_bytes = 0;
|
37
|
+
test_allocator_net_allocations = 0;
|
38
|
+
{
|
39
|
+
uint8_t n_hashes = 1;
|
40
|
+
uint32_t n_buckets = 5;
|
41
|
+
std::stringstream s(std::ios::in | std::ios::out | std::ios::binary);
|
42
|
+
count_min_sketch_test_alloc c(n_hashes, n_buckets, DEFAULT_SEED, alloc(0));
|
43
|
+
c.serialize(s);
|
44
|
+
count_min_sketch_test_alloc d = count_min_sketch_test_alloc::deserialize(s, DEFAULT_SEED, alloc(0)) ;
|
45
|
+
REQUIRE(c.get_num_hashes() == d.get_num_hashes());
|
46
|
+
REQUIRE(c.get_num_buckets() == d.get_num_buckets());
|
47
|
+
REQUIRE(c.get_seed() == d.get_seed());
|
48
|
+
uint64_t zero = 0;
|
49
|
+
REQUIRE(c.get_estimate(zero) == d.get_estimate(zero));
|
50
|
+
REQUIRE(c.get_total_weight() == d.get_total_weight());
|
51
|
+
|
52
|
+
// Check that all entries are equal and 0
|
53
|
+
for (auto di: d) {
|
54
|
+
REQUIRE(di == 0);
|
55
|
+
}
|
56
|
+
}
|
57
|
+
REQUIRE(test_allocator_total_bytes == 0);
|
58
|
+
REQUIRE(test_allocator_net_allocations == 0);
|
59
|
+
}
|
60
|
+
|
61
|
+
TEST_CASE("CountMin sketch test allocator: serialize-deserialize non-empty", "[cm_sketch_alloc]") {
|
62
|
+
test_allocator_total_bytes = 0;
|
63
|
+
test_allocator_net_allocations = 0;
|
64
|
+
{
|
65
|
+
uint8_t n_hashes = 3;
|
66
|
+
uint32_t n_buckets = 1024;
|
67
|
+
std::stringstream s(std::ios::in | std::ios::out | std::ios::binary);
|
68
|
+
count_min_sketch_test_alloc c(n_hashes, n_buckets, DEFAULT_SEED, alloc(0));
|
69
|
+
for (uint64_t i = 0; i < 10; ++i) c.update(i, 10 * i * i);
|
70
|
+
c.serialize(s);
|
71
|
+
count_min_sketch_test_alloc d = count_min_sketch_test_alloc::deserialize(s, DEFAULT_SEED, alloc(0));
|
72
|
+
REQUIRE(c.get_num_hashes() == d.get_num_hashes());
|
73
|
+
REQUIRE(c.get_num_buckets() == d.get_num_buckets());
|
74
|
+
REQUIRE(c.get_seed() == d.get_seed());
|
75
|
+
REQUIRE(c.get_total_weight() == d.get_total_weight());
|
76
|
+
for (uint64_t i = 0; i < 10; ++i) {
|
77
|
+
REQUIRE(c.get_estimate(i) == d.get_estimate(i));
|
78
|
+
}
|
79
|
+
|
80
|
+
auto c_it = c.begin();
|
81
|
+
auto d_it = d.begin();
|
82
|
+
while (c_it != c.end()) {
|
83
|
+
REQUIRE(*c_it == *d_it);
|
84
|
+
++c_it;
|
85
|
+
++d_it;
|
86
|
+
}
|
87
|
+
}
|
88
|
+
REQUIRE(test_allocator_total_bytes == 0);
|
89
|
+
REQUIRE(test_allocator_net_allocations == 0);
|
90
|
+
}
|
91
|
+
|
92
|
+
TEST_CASE("CountMin sketch test allocator: bytes serialize-deserialize empty", "[cm_sketch_alloc]") {
|
93
|
+
test_allocator_total_bytes = 0;
|
94
|
+
test_allocator_net_allocations = 0;
|
95
|
+
{
|
96
|
+
uint8_t n_hashes = 3;
|
97
|
+
uint32_t n_buckets = 32;
|
98
|
+
count_min_sketch_test_alloc c(n_hashes, n_buckets, DEFAULT_SEED, alloc(0));
|
99
|
+
auto bytes = c.serialize();
|
100
|
+
|
101
|
+
REQUIRE_THROWS_AS(count_min_sketch_test_alloc::deserialize(bytes.data(), bytes.size(), DEFAULT_SEED-1, alloc(0)), std::invalid_argument);
|
102
|
+
auto d = count_min_sketch_test_alloc::deserialize(bytes.data(), bytes.size(), DEFAULT_SEED, alloc(0));
|
103
|
+
REQUIRE(c.get_num_hashes() == d.get_num_hashes());
|
104
|
+
REQUIRE(c.get_num_buckets() == d.get_num_buckets());
|
105
|
+
REQUIRE(c.get_seed() == d.get_seed());
|
106
|
+
uint64_t zero = 0;
|
107
|
+
REQUIRE(c.get_estimate(zero) == d.get_estimate(zero));
|
108
|
+
REQUIRE(c.get_total_weight() == d.get_total_weight());
|
109
|
+
|
110
|
+
// Check that all entries are equal and 0
|
111
|
+
for (auto di: d) {
|
112
|
+
REQUIRE(di == 0);
|
113
|
+
}
|
114
|
+
}
|
115
|
+
REQUIRE(test_allocator_total_bytes == 0);
|
116
|
+
REQUIRE(test_allocator_net_allocations == 0);
|
117
|
+
}
|
118
|
+
|
119
|
+
TEST_CASE("CountMin sketch test allocator: bytes serialize-deserialize non-empty", "[cm_sketch_alloc]") {
|
120
|
+
test_allocator_total_bytes = 0;
|
121
|
+
test_allocator_net_allocations = 0;
|
122
|
+
{
|
123
|
+
uint8_t n_hashes = 5;
|
124
|
+
uint32_t n_buckets = 64;
|
125
|
+
count_min_sketch_test_alloc c(n_hashes, n_buckets, DEFAULT_SEED, alloc(0));
|
126
|
+
for (uint64_t i = 0; i < 10; ++i) c.update(i, 10 * i * i);
|
127
|
+
|
128
|
+
auto bytes = c.serialize();
|
129
|
+
REQUIRE_THROWS_AS(count_min_sketch_test_alloc::deserialize(bytes.data(), bytes.size(), DEFAULT_SEED-1, alloc(0)), std::invalid_argument);
|
130
|
+
auto d = count_min_sketch_test_alloc::deserialize(bytes.data(), bytes.size(), DEFAULT_SEED, alloc(0));
|
131
|
+
|
132
|
+
REQUIRE(c.get_num_hashes() == d.get_num_hashes());
|
133
|
+
REQUIRE(c.get_num_buckets() == d.get_num_buckets());
|
134
|
+
REQUIRE(c.get_seed() == d.get_seed());
|
135
|
+
REQUIRE(c.get_total_weight() == d.get_total_weight());
|
136
|
+
|
137
|
+
// Check that all entries are equal
|
138
|
+
auto c_it = c.begin();
|
139
|
+
auto d_it = d.begin();
|
140
|
+
while (c_it != c.end()) {
|
141
|
+
REQUIRE(*c_it == *d_it);
|
142
|
+
++c_it;
|
143
|
+
++d_it;
|
144
|
+
}
|
145
|
+
|
146
|
+
// Check that the estimates agree
|
147
|
+
for (uint64_t i = 0; i < 10; ++i) {
|
148
|
+
REQUIRE(c.get_estimate(i) == d.get_estimate(i));
|
149
|
+
}
|
150
|
+
}
|
151
|
+
REQUIRE(test_allocator_total_bytes == 0);
|
152
|
+
REQUIRE(test_allocator_net_allocations == 0);
|
153
|
+
}
|
154
|
+
|
155
|
+
} // namespace datasketches
|