cumo 0.1.0
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- checksums.yaml +7 -0
- data/.gitignore +27 -0
- data/.travis.yml +5 -0
- data/3rd_party/mkmf-cu/.gitignore +36 -0
- data/3rd_party/mkmf-cu/Gemfile +3 -0
- data/3rd_party/mkmf-cu/LICENSE +21 -0
- data/3rd_party/mkmf-cu/README.md +36 -0
- data/3rd_party/mkmf-cu/Rakefile +11 -0
- data/3rd_party/mkmf-cu/bin/mkmf-cu-nvcc +4 -0
- data/3rd_party/mkmf-cu/lib/mkmf-cu.rb +32 -0
- data/3rd_party/mkmf-cu/lib/mkmf-cu/cli.rb +80 -0
- data/3rd_party/mkmf-cu/lib/mkmf-cu/nvcc.rb +157 -0
- data/3rd_party/mkmf-cu/mkmf-cu.gemspec +16 -0
- data/3rd_party/mkmf-cu/test/test_mkmf-cu.rb +67 -0
- data/CODE_OF_CONDUCT.md +46 -0
- data/Gemfile +8 -0
- data/LICENSE.txt +82 -0
- data/README.md +252 -0
- data/Rakefile +43 -0
- data/bench/broadcast_fp32.rb +138 -0
- data/bench/cumo_bench.rb +193 -0
- data/bench/numo_bench.rb +138 -0
- data/bench/reduction_fp32.rb +117 -0
- data/bin/console +14 -0
- data/bin/setup +8 -0
- data/cumo.gemspec +32 -0
- data/ext/cumo/cuda/cublas.c +278 -0
- data/ext/cumo/cuda/driver.c +421 -0
- data/ext/cumo/cuda/memory_pool.cpp +185 -0
- data/ext/cumo/cuda/memory_pool_impl.cpp +308 -0
- data/ext/cumo/cuda/memory_pool_impl.hpp +370 -0
- data/ext/cumo/cuda/memory_pool_impl_test.cpp +554 -0
- data/ext/cumo/cuda/nvrtc.c +207 -0
- data/ext/cumo/cuda/runtime.c +167 -0
- data/ext/cumo/cumo.c +148 -0
- data/ext/cumo/depend.erb +58 -0
- data/ext/cumo/extconf.rb +179 -0
- data/ext/cumo/include/cumo.h +25 -0
- data/ext/cumo/include/cumo/compat.h +23 -0
- data/ext/cumo/include/cumo/cuda/cublas.h +153 -0
- data/ext/cumo/include/cumo/cuda/cumo_thrust.hpp +187 -0
- data/ext/cumo/include/cumo/cuda/cumo_thrust_complex.hpp +79 -0
- data/ext/cumo/include/cumo/cuda/driver.h +22 -0
- data/ext/cumo/include/cumo/cuda/memory_pool.h +28 -0
- data/ext/cumo/include/cumo/cuda/nvrtc.h +22 -0
- data/ext/cumo/include/cumo/cuda/runtime.h +40 -0
- data/ext/cumo/include/cumo/indexer.h +238 -0
- data/ext/cumo/include/cumo/intern.h +142 -0
- data/ext/cumo/include/cumo/intern_fwd.h +38 -0
- data/ext/cumo/include/cumo/intern_kernel.h +6 -0
- data/ext/cumo/include/cumo/narray.h +429 -0
- data/ext/cumo/include/cumo/narray_kernel.h +149 -0
- data/ext/cumo/include/cumo/ndloop.h +95 -0
- data/ext/cumo/include/cumo/reduce_kernel.h +126 -0
- data/ext/cumo/include/cumo/template.h +158 -0
- data/ext/cumo/include/cumo/template_kernel.h +77 -0
- data/ext/cumo/include/cumo/types/bit.h +40 -0
- data/ext/cumo/include/cumo/types/bit_kernel.h +34 -0
- data/ext/cumo/include/cumo/types/complex.h +402 -0
- data/ext/cumo/include/cumo/types/complex_kernel.h +414 -0
- data/ext/cumo/include/cumo/types/complex_macro.h +382 -0
- data/ext/cumo/include/cumo/types/complex_macro_kernel.h +186 -0
- data/ext/cumo/include/cumo/types/dcomplex.h +46 -0
- data/ext/cumo/include/cumo/types/dcomplex_kernel.h +13 -0
- data/ext/cumo/include/cumo/types/dfloat.h +47 -0
- data/ext/cumo/include/cumo/types/dfloat_kernel.h +14 -0
- data/ext/cumo/include/cumo/types/float_def.h +34 -0
- data/ext/cumo/include/cumo/types/float_def_kernel.h +39 -0
- data/ext/cumo/include/cumo/types/float_macro.h +191 -0
- data/ext/cumo/include/cumo/types/float_macro_kernel.h +158 -0
- data/ext/cumo/include/cumo/types/int16.h +24 -0
- data/ext/cumo/include/cumo/types/int16_kernel.h +23 -0
- data/ext/cumo/include/cumo/types/int32.h +24 -0
- data/ext/cumo/include/cumo/types/int32_kernel.h +19 -0
- data/ext/cumo/include/cumo/types/int64.h +24 -0
- data/ext/cumo/include/cumo/types/int64_kernel.h +19 -0
- data/ext/cumo/include/cumo/types/int8.h +24 -0
- data/ext/cumo/include/cumo/types/int8_kernel.h +19 -0
- data/ext/cumo/include/cumo/types/int_macro.h +67 -0
- data/ext/cumo/include/cumo/types/int_macro_kernel.h +48 -0
- data/ext/cumo/include/cumo/types/real_accum.h +486 -0
- data/ext/cumo/include/cumo/types/real_accum_kernel.h +101 -0
- data/ext/cumo/include/cumo/types/robj_macro.h +80 -0
- data/ext/cumo/include/cumo/types/robj_macro_kernel.h +0 -0
- data/ext/cumo/include/cumo/types/robject.h +27 -0
- data/ext/cumo/include/cumo/types/robject_kernel.h +7 -0
- data/ext/cumo/include/cumo/types/scomplex.h +46 -0
- data/ext/cumo/include/cumo/types/scomplex_kernel.h +13 -0
- data/ext/cumo/include/cumo/types/sfloat.h +48 -0
- data/ext/cumo/include/cumo/types/sfloat_kernel.h +14 -0
- data/ext/cumo/include/cumo/types/uint16.h +25 -0
- data/ext/cumo/include/cumo/types/uint16_kernel.h +20 -0
- data/ext/cumo/include/cumo/types/uint32.h +25 -0
- data/ext/cumo/include/cumo/types/uint32_kernel.h +20 -0
- data/ext/cumo/include/cumo/types/uint64.h +25 -0
- data/ext/cumo/include/cumo/types/uint64_kernel.h +20 -0
- data/ext/cumo/include/cumo/types/uint8.h +25 -0
- data/ext/cumo/include/cumo/types/uint8_kernel.h +20 -0
- data/ext/cumo/include/cumo/types/uint_macro.h +58 -0
- data/ext/cumo/include/cumo/types/uint_macro_kernel.h +38 -0
- data/ext/cumo/include/cumo/types/xint_macro.h +169 -0
- data/ext/cumo/include/cumo/types/xint_macro_kernel.h +88 -0
- data/ext/cumo/narray/SFMT-params.h +97 -0
- data/ext/cumo/narray/SFMT-params19937.h +46 -0
- data/ext/cumo/narray/SFMT.c +620 -0
- data/ext/cumo/narray/SFMT.h +167 -0
- data/ext/cumo/narray/array.c +638 -0
- data/ext/cumo/narray/data.c +961 -0
- data/ext/cumo/narray/gen/cogen.rb +56 -0
- data/ext/cumo/narray/gen/cogen_kernel.rb +58 -0
- data/ext/cumo/narray/gen/def/bit.rb +37 -0
- data/ext/cumo/narray/gen/def/dcomplex.rb +39 -0
- data/ext/cumo/narray/gen/def/dfloat.rb +37 -0
- data/ext/cumo/narray/gen/def/int16.rb +36 -0
- data/ext/cumo/narray/gen/def/int32.rb +36 -0
- data/ext/cumo/narray/gen/def/int64.rb +36 -0
- data/ext/cumo/narray/gen/def/int8.rb +36 -0
- data/ext/cumo/narray/gen/def/robject.rb +37 -0
- data/ext/cumo/narray/gen/def/scomplex.rb +39 -0
- data/ext/cumo/narray/gen/def/sfloat.rb +37 -0
- data/ext/cumo/narray/gen/def/uint16.rb +36 -0
- data/ext/cumo/narray/gen/def/uint32.rb +36 -0
- data/ext/cumo/narray/gen/def/uint64.rb +36 -0
- data/ext/cumo/narray/gen/def/uint8.rb +36 -0
- data/ext/cumo/narray/gen/erbpp2.rb +346 -0
- data/ext/cumo/narray/gen/narray_def.rb +268 -0
- data/ext/cumo/narray/gen/spec.rb +425 -0
- data/ext/cumo/narray/gen/tmpl/accum.c +86 -0
- data/ext/cumo/narray/gen/tmpl/accum_binary.c +121 -0
- data/ext/cumo/narray/gen/tmpl/accum_binary_kernel.cu +61 -0
- data/ext/cumo/narray/gen/tmpl/accum_index.c +119 -0
- data/ext/cumo/narray/gen/tmpl/accum_index_kernel.cu +66 -0
- data/ext/cumo/narray/gen/tmpl/accum_kernel.cu +12 -0
- data/ext/cumo/narray/gen/tmpl/alloc_func.c +107 -0
- data/ext/cumo/narray/gen/tmpl/allocate.c +37 -0
- data/ext/cumo/narray/gen/tmpl/aref.c +66 -0
- data/ext/cumo/narray/gen/tmpl/aref_cpu.c +50 -0
- data/ext/cumo/narray/gen/tmpl/aset.c +56 -0
- data/ext/cumo/narray/gen/tmpl/binary.c +162 -0
- data/ext/cumo/narray/gen/tmpl/binary2.c +70 -0
- data/ext/cumo/narray/gen/tmpl/binary2_kernel.cu +15 -0
- data/ext/cumo/narray/gen/tmpl/binary_kernel.cu +31 -0
- data/ext/cumo/narray/gen/tmpl/binary_s.c +45 -0
- data/ext/cumo/narray/gen/tmpl/binary_s_kernel.cu +15 -0
- data/ext/cumo/narray/gen/tmpl/bincount.c +181 -0
- data/ext/cumo/narray/gen/tmpl/cast.c +44 -0
- data/ext/cumo/narray/gen/tmpl/cast_array.c +13 -0
- data/ext/cumo/narray/gen/tmpl/class.c +9 -0
- data/ext/cumo/narray/gen/tmpl/class_kernel.cu +6 -0
- data/ext/cumo/narray/gen/tmpl/clip.c +121 -0
- data/ext/cumo/narray/gen/tmpl/coerce_cast.c +10 -0
- data/ext/cumo/narray/gen/tmpl/complex_accum_kernel.cu +129 -0
- data/ext/cumo/narray/gen/tmpl/cond_binary.c +68 -0
- data/ext/cumo/narray/gen/tmpl/cond_binary_kernel.cu +18 -0
- data/ext/cumo/narray/gen/tmpl/cond_unary.c +46 -0
- data/ext/cumo/narray/gen/tmpl/cum.c +50 -0
- data/ext/cumo/narray/gen/tmpl/each.c +47 -0
- data/ext/cumo/narray/gen/tmpl/each_with_index.c +70 -0
- data/ext/cumo/narray/gen/tmpl/ewcomp.c +79 -0
- data/ext/cumo/narray/gen/tmpl/ewcomp_kernel.cu +19 -0
- data/ext/cumo/narray/gen/tmpl/extract.c +22 -0
- data/ext/cumo/narray/gen/tmpl/extract_cpu.c +26 -0
- data/ext/cumo/narray/gen/tmpl/extract_data.c +53 -0
- data/ext/cumo/narray/gen/tmpl/eye.c +105 -0
- data/ext/cumo/narray/gen/tmpl/eye_kernel.cu +19 -0
- data/ext/cumo/narray/gen/tmpl/fill.c +52 -0
- data/ext/cumo/narray/gen/tmpl/fill_kernel.cu +29 -0
- data/ext/cumo/narray/gen/tmpl/float_accum_kernel.cu +106 -0
- data/ext/cumo/narray/gen/tmpl/format.c +62 -0
- data/ext/cumo/narray/gen/tmpl/format_to_a.c +49 -0
- data/ext/cumo/narray/gen/tmpl/frexp.c +38 -0
- data/ext/cumo/narray/gen/tmpl/gemm.c +203 -0
- data/ext/cumo/narray/gen/tmpl/init_class.c +20 -0
- data/ext/cumo/narray/gen/tmpl/init_module.c +12 -0
- data/ext/cumo/narray/gen/tmpl/inspect.c +21 -0
- data/ext/cumo/narray/gen/tmpl/lib.c +50 -0
- data/ext/cumo/narray/gen/tmpl/lib_kernel.cu +24 -0
- data/ext/cumo/narray/gen/tmpl/logseq.c +102 -0
- data/ext/cumo/narray/gen/tmpl/logseq_kernel.cu +31 -0
- data/ext/cumo/narray/gen/tmpl/map_with_index.c +98 -0
- data/ext/cumo/narray/gen/tmpl/median.c +66 -0
- data/ext/cumo/narray/gen/tmpl/minmax.c +47 -0
- data/ext/cumo/narray/gen/tmpl/module.c +9 -0
- data/ext/cumo/narray/gen/tmpl/module_kernel.cu +1 -0
- data/ext/cumo/narray/gen/tmpl/new_dim0.c +15 -0
- data/ext/cumo/narray/gen/tmpl/new_dim0_kernel.cu +8 -0
- data/ext/cumo/narray/gen/tmpl/poly.c +50 -0
- data/ext/cumo/narray/gen/tmpl/pow.c +97 -0
- data/ext/cumo/narray/gen/tmpl/pow_kernel.cu +29 -0
- data/ext/cumo/narray/gen/tmpl/powint.c +17 -0
- data/ext/cumo/narray/gen/tmpl/qsort.c +212 -0
- data/ext/cumo/narray/gen/tmpl/rand.c +168 -0
- data/ext/cumo/narray/gen/tmpl/rand_norm.c +121 -0
- data/ext/cumo/narray/gen/tmpl/real_accum_kernel.cu +75 -0
- data/ext/cumo/narray/gen/tmpl/seq.c +112 -0
- data/ext/cumo/narray/gen/tmpl/seq_kernel.cu +43 -0
- data/ext/cumo/narray/gen/tmpl/set2.c +57 -0
- data/ext/cumo/narray/gen/tmpl/sort.c +48 -0
- data/ext/cumo/narray/gen/tmpl/sort_index.c +111 -0
- data/ext/cumo/narray/gen/tmpl/store.c +41 -0
- data/ext/cumo/narray/gen/tmpl/store_array.c +187 -0
- data/ext/cumo/narray/gen/tmpl/store_array_kernel.cu +58 -0
- data/ext/cumo/narray/gen/tmpl/store_bit.c +86 -0
- data/ext/cumo/narray/gen/tmpl/store_bit_kernel.cu +66 -0
- data/ext/cumo/narray/gen/tmpl/store_from.c +81 -0
- data/ext/cumo/narray/gen/tmpl/store_from_kernel.cu +58 -0
- data/ext/cumo/narray/gen/tmpl/store_kernel.cu +3 -0
- data/ext/cumo/narray/gen/tmpl/store_numeric.c +9 -0
- data/ext/cumo/narray/gen/tmpl/to_a.c +43 -0
- data/ext/cumo/narray/gen/tmpl/unary.c +132 -0
- data/ext/cumo/narray/gen/tmpl/unary2.c +60 -0
- data/ext/cumo/narray/gen/tmpl/unary_kernel.cu +72 -0
- data/ext/cumo/narray/gen/tmpl/unary_ret2.c +34 -0
- data/ext/cumo/narray/gen/tmpl/unary_s.c +86 -0
- data/ext/cumo/narray/gen/tmpl/unary_s_kernel.cu +58 -0
- data/ext/cumo/narray/gen/tmpl_bit/allocate.c +24 -0
- data/ext/cumo/narray/gen/tmpl_bit/aref.c +54 -0
- data/ext/cumo/narray/gen/tmpl_bit/aref_cpu.c +57 -0
- data/ext/cumo/narray/gen/tmpl_bit/aset.c +56 -0
- data/ext/cumo/narray/gen/tmpl_bit/binary.c +98 -0
- data/ext/cumo/narray/gen/tmpl_bit/bit_count.c +64 -0
- data/ext/cumo/narray/gen/tmpl_bit/bit_count_cpu.c +88 -0
- data/ext/cumo/narray/gen/tmpl_bit/bit_count_kernel.cu +76 -0
- data/ext/cumo/narray/gen/tmpl_bit/bit_reduce.c +133 -0
- data/ext/cumo/narray/gen/tmpl_bit/each.c +48 -0
- data/ext/cumo/narray/gen/tmpl_bit/each_with_index.c +70 -0
- data/ext/cumo/narray/gen/tmpl_bit/extract.c +30 -0
- data/ext/cumo/narray/gen/tmpl_bit/extract_cpu.c +29 -0
- data/ext/cumo/narray/gen/tmpl_bit/fill.c +69 -0
- data/ext/cumo/narray/gen/tmpl_bit/format.c +64 -0
- data/ext/cumo/narray/gen/tmpl_bit/format_to_a.c +51 -0
- data/ext/cumo/narray/gen/tmpl_bit/inspect.c +21 -0
- data/ext/cumo/narray/gen/tmpl_bit/mask.c +136 -0
- data/ext/cumo/narray/gen/tmpl_bit/none_p.c +14 -0
- data/ext/cumo/narray/gen/tmpl_bit/store_array.c +108 -0
- data/ext/cumo/narray/gen/tmpl_bit/store_bit.c +70 -0
- data/ext/cumo/narray/gen/tmpl_bit/store_from.c +60 -0
- data/ext/cumo/narray/gen/tmpl_bit/to_a.c +47 -0
- data/ext/cumo/narray/gen/tmpl_bit/unary.c +81 -0
- data/ext/cumo/narray/gen/tmpl_bit/where.c +90 -0
- data/ext/cumo/narray/gen/tmpl_bit/where2.c +95 -0
- data/ext/cumo/narray/index.c +880 -0
- data/ext/cumo/narray/kwargs.c +153 -0
- data/ext/cumo/narray/math.c +142 -0
- data/ext/cumo/narray/narray.c +1948 -0
- data/ext/cumo/narray/ndloop.c +2105 -0
- data/ext/cumo/narray/rand.c +45 -0
- data/ext/cumo/narray/step.c +474 -0
- data/ext/cumo/narray/struct.c +886 -0
- data/lib/cumo.rb +3 -0
- data/lib/cumo/cuda.rb +11 -0
- data/lib/cumo/cuda/compile_error.rb +36 -0
- data/lib/cumo/cuda/compiler.rb +161 -0
- data/lib/cumo/cuda/device.rb +47 -0
- data/lib/cumo/cuda/link_state.rb +31 -0
- data/lib/cumo/cuda/module.rb +40 -0
- data/lib/cumo/cuda/nvrtc_program.rb +27 -0
- data/lib/cumo/linalg.rb +12 -0
- data/lib/cumo/narray.rb +2 -0
- data/lib/cumo/narray/extra.rb +1278 -0
- data/lib/erbpp.rb +294 -0
- data/lib/erbpp/line_number.rb +137 -0
- data/lib/erbpp/narray_def.rb +381 -0
- data/numo-narray-version +1 -0
- data/run.gdb +7 -0
- metadata +353 -0
@@ -0,0 +1,486 @@
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#define not_nan(x) ((x)==(x))
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#define m_mulsum(x,y,z) {z = m_add(m_mul(x,y),z);}
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#define m_mulsum_nan(x,y,z) { \
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if(not_nan(x) && not_nan(y)) { \
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z = m_add(m_mul(x,y),z); \
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}}
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#define m_cumsum(x,y) {(x)=m_add(x,y);}
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#define m_cumsum_nan(x,y) { \
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if (!not_nan(x)) { \
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(x) = (y); \
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} else if (not_nan(y)) { \
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(x) = m_add(x,y); \
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}}
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#define m_cumprod(x,y) {(x)=m_mul(x,y);}
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#define m_cumprod_nan(x,y) { \
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if (!not_nan(x)) { \
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(x) = (y); \
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} else if (not_nan(y)) { \
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(x) = m_mul(x,y); \
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}}
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static inline dtype f_sum(size_t n, char *p, ssize_t stride)
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{
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dtype x,y=m_zero;
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for (; i--;) {
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x = *(dtype*)p;
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y = m_add(x,y);
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p += stride;
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}
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return y;
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}
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static inline dtype f_sum_nan(size_t n, char *p, ssize_t stride)
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{
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size_t i=n;
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dtype x,y=m_zero;
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for (; i--;) {
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x = *(dtype*)p;
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p += stride;
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if (not_nan(x)) {
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y = m_add(x,y);
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}
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}
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return y;
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}
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static inline dtype f_prod(size_t n, char *p, ssize_t stride)
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{
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size_t i=n;
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dtype x,y=m_one;
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for (; i--;) {
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x = *(dtype*)p;
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p += stride;
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y = m_mul(x,y);
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}
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return y;
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}
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static inline dtype f_prod_nan(size_t n, char *p, ssize_t stride)
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{
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size_t i=n;
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dtype x,y=m_one;
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for (; i--;) {
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x = *(dtype*)p;
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74
|
+
p += stride;
|
75
|
+
if (not_nan(x)) {
|
76
|
+
y = m_mul(x,y);
|
77
|
+
}
|
78
|
+
}
|
79
|
+
return y;
|
80
|
+
}
|
81
|
+
|
82
|
+
static inline dtype f_mean(size_t n, char *p, ssize_t stride)
|
83
|
+
{
|
84
|
+
size_t i=n;
|
85
|
+
size_t count=0;
|
86
|
+
dtype x,y=m_zero;
|
87
|
+
|
88
|
+
for (; i--;) {
|
89
|
+
x = *(dtype*)p;
|
90
|
+
p += stride;
|
91
|
+
y = m_add(x,y);
|
92
|
+
count++;
|
93
|
+
}
|
94
|
+
return m_div(y,m_from_real(count));
|
95
|
+
}
|
96
|
+
|
97
|
+
static inline dtype f_mean_nan(size_t n, char *p, ssize_t stride)
|
98
|
+
{
|
99
|
+
size_t i=n;
|
100
|
+
size_t count=0;
|
101
|
+
dtype x,y=m_zero;
|
102
|
+
|
103
|
+
for (; i--;) {
|
104
|
+
x = *(dtype*)p;
|
105
|
+
p += stride;
|
106
|
+
if (not_nan(x)) {
|
107
|
+
y = m_add(x,y);
|
108
|
+
count++;
|
109
|
+
}
|
110
|
+
}
|
111
|
+
return m_div(y,m_from_real(count));
|
112
|
+
}
|
113
|
+
|
114
|
+
static inline dtype f_var(size_t n, char *p, ssize_t stride)
|
115
|
+
{
|
116
|
+
size_t i=n;
|
117
|
+
size_t count=0;
|
118
|
+
dtype x,y=m_zero;
|
119
|
+
dtype a,m;
|
120
|
+
|
121
|
+
m = f_mean(n,p,stride);
|
122
|
+
|
123
|
+
for (; i--;) {
|
124
|
+
x = *(dtype*)p;
|
125
|
+
p += stride;
|
126
|
+
a = m_abs(m_sub(x,m));
|
127
|
+
y = m_add(y,m_square(a));
|
128
|
+
count++;
|
129
|
+
}
|
130
|
+
return m_div(y,m_from_real(count-1));
|
131
|
+
}
|
132
|
+
|
133
|
+
static inline dtype f_var_nan(size_t n, char *p, ssize_t stride)
|
134
|
+
{
|
135
|
+
size_t i=n;
|
136
|
+
size_t count=0;
|
137
|
+
dtype x,y=m_zero;
|
138
|
+
dtype a,m;
|
139
|
+
|
140
|
+
m = f_mean_nan(n,p,stride);
|
141
|
+
|
142
|
+
for (; i--;) {
|
143
|
+
x = *(dtype*)p;
|
144
|
+
p += stride;
|
145
|
+
if (not_nan(x)) {
|
146
|
+
a = m_abs(m_sub(x,m));
|
147
|
+
y = m_add(y,m_square(a));
|
148
|
+
count++;
|
149
|
+
}
|
150
|
+
}
|
151
|
+
return m_div(y,m_from_real(count-1));
|
152
|
+
}
|
153
|
+
|
154
|
+
static inline dtype f_stddev(size_t n, char *p, ssize_t stride)
|
155
|
+
{
|
156
|
+
return m_sqrt(f_var(n,p,stride));
|
157
|
+
}
|
158
|
+
|
159
|
+
static inline dtype f_stddev_nan(size_t n, char *p, ssize_t stride)
|
160
|
+
{
|
161
|
+
return m_sqrt(f_var_nan(n,p,stride));
|
162
|
+
}
|
163
|
+
|
164
|
+
static inline dtype f_rms(size_t n, char *p, ssize_t stride)
|
165
|
+
{
|
166
|
+
size_t i=n;
|
167
|
+
size_t count=0;
|
168
|
+
dtype x,y=m_zero;
|
169
|
+
|
170
|
+
for (; i--;) {
|
171
|
+
x = *(dtype*)p;
|
172
|
+
p += stride;
|
173
|
+
y = m_add(y,m_square(m_abs(x)));
|
174
|
+
count++;
|
175
|
+
}
|
176
|
+
return m_sqrt(m_div(y,m_from_real(count)));
|
177
|
+
}
|
178
|
+
|
179
|
+
static inline dtype f_rms_nan(size_t n, char *p, ssize_t stride)
|
180
|
+
{
|
181
|
+
size_t i=n;
|
182
|
+
size_t count=0;
|
183
|
+
dtype x,y=m_zero;
|
184
|
+
|
185
|
+
for (; i--;) {
|
186
|
+
x = *(dtype*)p;
|
187
|
+
p += stride;
|
188
|
+
if (not_nan(x)) {
|
189
|
+
y = m_add(y,m_square(m_abs(x)));
|
190
|
+
count++;
|
191
|
+
}
|
192
|
+
}
|
193
|
+
return m_sqrt(m_div(y,m_from_real(count)));
|
194
|
+
}
|
195
|
+
|
196
|
+
// ---------------------------------------------------------
|
197
|
+
|
198
|
+
static inline dtype f_min_nan(size_t n, char *p, ssize_t stride)
|
199
|
+
{
|
200
|
+
dtype x,y;
|
201
|
+
size_t i=n;
|
202
|
+
|
203
|
+
y = *(dtype*)p;
|
204
|
+
p += stride;
|
205
|
+
if (!not_nan(y)) {return y;}
|
206
|
+
for (i--; i--;) {
|
207
|
+
x = *(dtype*)p;
|
208
|
+
p += stride;
|
209
|
+
if (!not_nan(x)) {return x;}
|
210
|
+
if (m_lt(x,y)) {
|
211
|
+
y = x;
|
212
|
+
}
|
213
|
+
}
|
214
|
+
return y;
|
215
|
+
}
|
216
|
+
|
217
|
+
static inline dtype f_min(size_t n, char *p, ssize_t stride)
|
218
|
+
{
|
219
|
+
dtype x,y=m_zero;
|
220
|
+
size_t i=n;
|
221
|
+
|
222
|
+
for (; i--; ) {
|
223
|
+
y = *(dtype*)p;
|
224
|
+
p += stride;
|
225
|
+
if (not_nan(y)) {
|
226
|
+
for (; i--;) {
|
227
|
+
x = *(dtype*)p;
|
228
|
+
p += stride;
|
229
|
+
if (m_lt(x,y)) {
|
230
|
+
y = x;
|
231
|
+
}
|
232
|
+
}
|
233
|
+
break;
|
234
|
+
}
|
235
|
+
}
|
236
|
+
return y;
|
237
|
+
}
|
238
|
+
|
239
|
+
static inline dtype f_max_nan(size_t n, char *p, ssize_t stride)
|
240
|
+
{
|
241
|
+
dtype x,y;
|
242
|
+
size_t i=n;
|
243
|
+
|
244
|
+
y = *(dtype*)p;
|
245
|
+
p += stride;
|
246
|
+
if (!not_nan(y)) {return y;}
|
247
|
+
for (i--; i--;) {
|
248
|
+
x = *(dtype*)p;
|
249
|
+
p += stride;
|
250
|
+
if (!not_nan(x)) {return x;}
|
251
|
+
if (m_gt(x,y)) {
|
252
|
+
y = x;
|
253
|
+
}
|
254
|
+
}
|
255
|
+
return y;
|
256
|
+
}
|
257
|
+
|
258
|
+
static inline dtype f_max(size_t n, char *p, ssize_t stride)
|
259
|
+
{
|
260
|
+
dtype x,y=m_zero;
|
261
|
+
size_t i=n;
|
262
|
+
|
263
|
+
for (; i--; ) {
|
264
|
+
y = *(dtype*)p;
|
265
|
+
p += stride;
|
266
|
+
if (not_nan(y)) {
|
267
|
+
for (; i--;) {
|
268
|
+
x = *(dtype*)p;
|
269
|
+
p += stride;
|
270
|
+
if (m_gt(x,y)) {
|
271
|
+
y = x;
|
272
|
+
}
|
273
|
+
}
|
274
|
+
break;
|
275
|
+
}
|
276
|
+
}
|
277
|
+
return y;
|
278
|
+
}
|
279
|
+
|
280
|
+
static inline size_t f_min_index_nan(size_t n, char *p, ssize_t stride)
|
281
|
+
{
|
282
|
+
dtype x, y;
|
283
|
+
size_t i, j=0;
|
284
|
+
|
285
|
+
y = *(dtype*)p;
|
286
|
+
p += stride;
|
287
|
+
if (!not_nan(y)) {return j;}
|
288
|
+
for (i=1; i<n; i++) {
|
289
|
+
x = *(dtype*)p;
|
290
|
+
p += stride;
|
291
|
+
if (!not_nan(x)) {return i;}
|
292
|
+
if (m_lt(x,y)) {
|
293
|
+
y = x;
|
294
|
+
j = i;
|
295
|
+
}
|
296
|
+
}
|
297
|
+
return j;
|
298
|
+
}
|
299
|
+
|
300
|
+
static inline size_t f_min_index(size_t n, char *p, ssize_t stride)
|
301
|
+
{
|
302
|
+
dtype x, y;
|
303
|
+
size_t i, j=0;
|
304
|
+
|
305
|
+
for (i=0; i<n; i++) {
|
306
|
+
y = *(dtype*)p;
|
307
|
+
p += stride;
|
308
|
+
if (not_nan(y)) {
|
309
|
+
j = i; i++;
|
310
|
+
for (; i<n; i++) {
|
311
|
+
x = *(dtype*)p;
|
312
|
+
p += stride;
|
313
|
+
if (m_lt(x,y)) {
|
314
|
+
y = x;
|
315
|
+
j = i;
|
316
|
+
}
|
317
|
+
}
|
318
|
+
break;
|
319
|
+
}
|
320
|
+
}
|
321
|
+
return j;
|
322
|
+
}
|
323
|
+
|
324
|
+
static inline size_t f_max_index_nan(size_t n, char *p, ssize_t stride)
|
325
|
+
{
|
326
|
+
dtype x, y;
|
327
|
+
size_t i, j=0;
|
328
|
+
|
329
|
+
y = *(dtype*)p;
|
330
|
+
p += stride;
|
331
|
+
if (!not_nan(y)) {return j;}
|
332
|
+
for (i=1; i<n; i++) {
|
333
|
+
x = *(dtype*)p;
|
334
|
+
p += stride;
|
335
|
+
if (!not_nan(x)) {return i;}
|
336
|
+
if (m_gt(x,y)) {
|
337
|
+
y = x;
|
338
|
+
j = i;
|
339
|
+
}
|
340
|
+
}
|
341
|
+
return j;
|
342
|
+
}
|
343
|
+
|
344
|
+
static inline size_t f_max_index(size_t n, char *p, ssize_t stride)
|
345
|
+
{
|
346
|
+
dtype x, y;
|
347
|
+
size_t i, j=0;
|
348
|
+
|
349
|
+
for (i=0; i<n; i++) {
|
350
|
+
y = *(dtype*)p;
|
351
|
+
p += stride;
|
352
|
+
if (not_nan(y)) {
|
353
|
+
j = i; i++;
|
354
|
+
for (; i<n; i++) {
|
355
|
+
x = *(dtype*)p;
|
356
|
+
p += stride;
|
357
|
+
if (m_gt(x,y)) {
|
358
|
+
y = x;
|
359
|
+
j = i;
|
360
|
+
}
|
361
|
+
}
|
362
|
+
break;
|
363
|
+
}
|
364
|
+
}
|
365
|
+
return j;
|
366
|
+
}
|
367
|
+
|
368
|
+
static inline void
|
369
|
+
f_minmax_nan(size_t n, char *p, ssize_t stride, dtype *amin, dtype *amax)
|
370
|
+
{
|
371
|
+
dtype x,min,max;
|
372
|
+
size_t i=n;
|
373
|
+
|
374
|
+
min = max = *(dtype*)p;
|
375
|
+
p += stride;
|
376
|
+
if (!not_nan(min)) {
|
377
|
+
*amin = *amax = min;
|
378
|
+
return;
|
379
|
+
}
|
380
|
+
for (i--; i--;) {
|
381
|
+
x = *(dtype*)p;
|
382
|
+
p += stride;
|
383
|
+
if (!not_nan(x)) {
|
384
|
+
*amin = *amax = x;
|
385
|
+
return;
|
386
|
+
}
|
387
|
+
if (m_lt(x,min)) {
|
388
|
+
min = x;
|
389
|
+
}
|
390
|
+
if (m_gt(x,max)) {
|
391
|
+
max = x;
|
392
|
+
}
|
393
|
+
}
|
394
|
+
*amin = min;
|
395
|
+
*amax = max;
|
396
|
+
return;
|
397
|
+
}
|
398
|
+
|
399
|
+
static inline dtype f_ptp_nan(size_t n, char *p, ssize_t stride)
|
400
|
+
{
|
401
|
+
dtype min,max;
|
402
|
+
f_minmax_nan(n,p,stride,&min,&max);
|
403
|
+
return m_sub(max,min);
|
404
|
+
}
|
405
|
+
|
406
|
+
static inline void
|
407
|
+
f_minmax(size_t n, char *p, ssize_t stride, dtype *amin, dtype *amax)
|
408
|
+
{
|
409
|
+
dtype x,min,max;
|
410
|
+
size_t i=n;
|
411
|
+
|
412
|
+
min = max = m_zero;
|
413
|
+
for (; i--; ) {
|
414
|
+
min = *(dtype*)p;
|
415
|
+
p += stride;
|
416
|
+
if (not_nan(min)) {
|
417
|
+
max = min;
|
418
|
+
for (; i--;) {
|
419
|
+
x = *(dtype*)p;
|
420
|
+
p += stride;
|
421
|
+
if (m_lt(x,min)) {
|
422
|
+
min = x;
|
423
|
+
}
|
424
|
+
if (m_gt(x,max)) {
|
425
|
+
max = x;
|
426
|
+
}
|
427
|
+
}
|
428
|
+
break;
|
429
|
+
}
|
430
|
+
}
|
431
|
+
*amin = min;
|
432
|
+
*amax = max;
|
433
|
+
return;
|
434
|
+
}
|
435
|
+
|
436
|
+
static inline dtype f_ptp(size_t n, char *p, ssize_t stride)
|
437
|
+
{
|
438
|
+
dtype min,max;
|
439
|
+
f_minmax(n,p,stride,&min,&max);
|
440
|
+
return m_sub(max,min);
|
441
|
+
}
|
442
|
+
|
443
|
+
|
444
|
+
static inline dtype f_maximum(dtype x, dtype y)
|
445
|
+
{
|
446
|
+
if (m_ge(x,y)) {
|
447
|
+
return x;
|
448
|
+
}
|
449
|
+
if (not_nan(y)) {
|
450
|
+
return y;
|
451
|
+
}
|
452
|
+
return x;
|
453
|
+
}
|
454
|
+
|
455
|
+
static inline dtype f_maximum_nan(dtype x, dtype y)
|
456
|
+
{
|
457
|
+
if (m_ge(x,y)) {
|
458
|
+
return x;
|
459
|
+
}
|
460
|
+
if (!not_nan(x)) {
|
461
|
+
return x;
|
462
|
+
}
|
463
|
+
return y;
|
464
|
+
}
|
465
|
+
|
466
|
+
static inline dtype f_minimum(dtype x, dtype y)
|
467
|
+
{
|
468
|
+
if (m_le(x,y)) {
|
469
|
+
return x;
|
470
|
+
}
|
471
|
+
if (not_nan(y)) {
|
472
|
+
return y;
|
473
|
+
}
|
474
|
+
return x;
|
475
|
+
}
|
476
|
+
|
477
|
+
static inline dtype f_minimum_nan(dtype x, dtype y)
|
478
|
+
{
|
479
|
+
if (m_le(x,y)) {
|
480
|
+
return x;
|
481
|
+
}
|
482
|
+
if (!not_nan(x)) {
|
483
|
+
return x;
|
484
|
+
}
|
485
|
+
return y;
|
486
|
+
}
|