cqm-parsers 0.2.4 → 2.0.0

data/lib/qrda-export/catI-r5/qrda1_r5.rb

@@ -1,125 +0,0 @@
-require 'mustache'
-class Qrda1R5 < Mustache
-  include Qrda::Export::Helper::DateHelper
-  include Qrda::Export::Helper::Cat1ViewHelper
-
-  self.template_path = __dir__
-
-  def initialize(patient, measures, options = {})
-    @patient = patient
-    @measures = measures
-    @provider = options[:provider]
-    @performance_period_start = options[:start_time]
-    @performance_period_end = options[:end_time]
-    @submission_program = options[:submission_program]
-    @insurance_provider = JSON.parse(@patient.extendedData.insurance_providers) if @patient.extendedData && @patient.extendedData['insurance_providers']
-  end
-
-  def adverse_event
-    JSON.parse(@patient.dataElements.where(hqmfOid: { '$in' => HQMF::Util::HQMFTemplateHelper.get_all_hqmf_oids('adverse_event', '') }).to_json)
-  end
-
-  def allergy_intolerance
-    JSON.parse(@patient.dataElements.where(hqmfOid: { '$in' => HQMF::Util::HQMFTemplateHelper.get_all_hqmf_oids('allergy_intolerance', '') }).to_json)
-  end
-
-  def assessment_performed
-    JSON.parse(@patient.dataElements.where(hqmfOid: { '$in' => HQMF::Util::HQMFTemplateHelper.get_all_hqmf_oids('assessment', 'performed') }).to_json)
-  end
-
-  def communication_from_patient_to_provider
-    JSON.parse(@patient.dataElements.where(hqmfOid: { '$in' => HQMF::Util::HQMFTemplateHelper.get_all_hqmf_oids('communication_from_patient_to_provider', '') }).to_json)
-  end
-
-  def communication_from_provider_to_patient
-    JSON.parse(@patient.dataElements.where(hqmfOid: { '$in' => HQMF::Util::HQMFTemplateHelper.get_all_hqmf_oids('communication_from_provider_to_patient', '') }).to_json)
-  end
-
-  def communication_from_provider_to_provider
-    JSON.parse(@patient.dataElements.where(hqmfOid: { '$in' => HQMF::Util::HQMFTemplateHelper.get_all_hqmf_oids('communication_from_provider_to_provider', '') }).to_json)
-  end
-
-  def diagnosis
-    JSON.parse(@patient.dataElements.where(hqmfOid: { '$in' => HQMF::Util::HQMFTemplateHelper.get_all_hqmf_oids('diagnosis', '') }).to_json)
-  end
-
-  def device_ordered
-    JSON.parse(@patient.dataElements.where(hqmfOid: { '$in' => HQMF::Util::HQMFTemplateHelper.get_all_hqmf_oids('device', 'ordered') }).to_json)
-  end
-
-  def device_applied
-    JSON.parse(@patient.dataElements.where(hqmfOid: { '$in' => HQMF::Util::HQMFTemplateHelper.get_all_hqmf_oids('device', 'applied') }).to_json)
-  end
-
-  def diagnostic_study_ordered
-    JSON.parse(@patient.dataElements.where(hqmfOid: { '$in' => HQMF::Util::HQMFTemplateHelper.get_all_hqmf_oids('diagnostic_study', 'ordered') }).to_json)
-  end
-
-  def diagnostic_study_performed
-    JSON.parse(@patient.dataElements.where(hqmfOid: { '$in' => HQMF::Util::HQMFTemplateHelper.get_all_hqmf_oids('diagnostic_study', 'performed') }).to_json)
-  end
-
-  def encounter_ordered
-    JSON.parse(@patient.dataElements.where(hqmfOid: { '$in' => HQMF::Util::HQMFTemplateHelper.get_all_hqmf_oids('encounter', 'ordered') }).to_json)
-  end
-
-  def encounter_performed
-    JSON.parse(@patient.dataElements.where(hqmfOid: { '$in' => HQMF::Util::HQMFTemplateHelper.get_all_hqmf_oids('encounter', 'performed') }).to_json)
-  end
-
-  def immunization_administered
-    JSON.parse(@patient.dataElements.where(hqmfOid: { '$in' => HQMF::Util::HQMFTemplateHelper.get_all_hqmf_oids('immunization', 'administered') }).to_json)
-  end
-
-  def intervention_ordered
-    JSON.parse(@patient.dataElements.where(hqmfOid: { '$in' => HQMF::Util::HQMFTemplateHelper.get_all_hqmf_oids('intervention', 'ordered') }).to_json)
-  end
-
-  def intervention_performed
-    JSON.parse(@patient.dataElements.where(hqmfOid: { '$in' => HQMF::Util::HQMFTemplateHelper.get_all_hqmf_oids('intervention', 'performed') }).to_json)
-  end
-
-  def lab_test_performed
-    JSON.parse(@patient.dataElements.where(hqmfOid: { '$in' => HQMF::Util::HQMFTemplateHelper.get_all_hqmf_oids('laboratory_test', 'performed') }).to_json)
-  end
-
-  def lab_test_ordered
-    JSON.parse(@patient.dataElements.where(hqmfOid: { '$in' => HQMF::Util::HQMFTemplateHelper.get_all_hqmf_oids('laboratory_test', 'ordered') }).to_json)
-  end
-
-  def medication_active
-    JSON.parse(@patient.dataElements.where(hqmfOid: { '$in' => HQMF::Util::HQMFTemplateHelper.get_all_hqmf_oids('medication', 'active') }).to_json)
-  end
-
-  def medication_administered
-    JSON.parse(@patient.dataElements.where(hqmfOid: { '$in' => HQMF::Util::HQMFTemplateHelper.get_all_hqmf_oids('medication', 'administered') + HQMF::Util::HQMFTemplateHelper.get_all_hqmf_oids('substance', 'administered') }).to_json)
-  end
-
-  def medication_discharge
-    JSON.parse(@patient.dataElements.where(hqmfOid: { '$in' => HQMF::Util::HQMFTemplateHelper.get_all_hqmf_oids('medication', 'discharge') }).to_json)
-  end
-
-  def medication_dispensed
-    JSON.parse(@patient.dataElements.where(hqmfOid: { '$in' => HQMF::Util::HQMFTemplateHelper.get_all_hqmf_oids('medication', 'dispensed') }).to_json)
-  end
-
-  def medication_ordered
-    JSON.parse(@patient.dataElements.where(hqmfOid: { '$in' => HQMF::Util::HQMFTemplateHelper.get_all_hqmf_oids('medication', 'ordered') }).to_json)
-  end
-
-  def patient_characteristic_expired
-    JSON.parse(@patient.dataElements.where(hqmfOid: { '$in' => HQMF::Util::HQMFTemplateHelper.get_all_hqmf_oids('patient_characteristic_expired', '') }).to_json)
-  end
-  
-  def physical_exam_performed
-    JSON.parse(@patient.dataElements.where(hqmfOid: { '$in' => HQMF::Util::HQMFTemplateHelper.get_all_hqmf_oids('physical_exam', 'performed') }).to_json)
-  end
-
-  def procedure_ordered
-    JSON.parse(@patient.dataElements.where(hqmfOid: { '$in' => HQMF::Util::HQMFTemplateHelper.get_all_hqmf_oids('procedure', 'ordered') }).to_json)
-  end
-
-  def procedure_performed
-    JSON.parse(@patient.dataElements.where(hqmfOid: { '$in' => HQMF::Util::HQMFTemplateHelper.get_all_hqmf_oids('procedure', 'performed') }).to_json)
-  end
-end

data/lib/qrda-export/catI-r5/qrda_header/_author.mustache

@@ -1,24 +0,0 @@
-<author>
-  <time value="{{{current_time}}}"/>
-  <assignedAuthor>
-    <!-- NPI -->
-    {{#provider}}
-      <id extension="{{{provider_npi}}}" root="2.16.840.1.113883.4.6"/>
-    {{/provider}}
-    {{^provider}}
-      <id extension="1982671962" root="2.16.840.1.113883.4.6"/>
-    {{/provider}}
-    <addr>
-      <streetAddressLine>202 Burlington Rd.</streetAddressLine>
-      <city>Bedford</city>
-      <state>MA</state>
-      <postalCode>01730</postalCode>
-      <country>US</country>
-    </addr>
-    <telecom use="WP" value="tel:(781)271-3000"/>
-    <assignedAuthoringDevice>
-      <manufacturerModelName>Cypress</manufacturerModelName>
-      <softwareName>Cypress</softwareName>
-    </assignedAuthoringDevice>
-  </assignedAuthor>
-</author>

data/lib/qrda-export/catI-r5/qrda_header/_custodian.mustache

@@ -1,43 +0,0 @@
-{{#provider}}
-<custodian>
-  <assignedCustodian>
-    <representedCustodianOrganization>
-      {{#provider_ccn}}
-        <id extension="{{{provider_ccn}}}" root="2.16.840.1.113883.4.336"/>
-      {{/provider_ccn}}
-      {{^provider_ccn}}
-        <id extension="800890" root="2.16.840.1.113883.4.336"/>
-      {{/provider_ccn}}
-      <name>Cypress Test Deck</name>
-      <telecom use="WP" value="tel:(781)271-3000"/>
-      {{#provider_addresses}}
-        <addr use="HP">
-          <streetAddressLine>{{{provider_street}}}</streetAddressLine>
-          <city>{{{city}}}</city>
-          <state>{{{state}}}</state>
-          <postalCode>{{{zip}}}</postalCode>
-          <country>{{{country}}}</country>
-        </addr>
-      {{/provider_addresses}}
-    </representedCustodianOrganization>
-  </assignedCustodian>
-</custodian>
-{{/provider}}
-{{^provider}}
-<custodian>
-  <assignedCustodian>
-    <representedCustodianOrganization>
-      <id extension="800890" root="2.16.840.1.113883.4.336"/>
-      <name>Cypress Test Deck</name>
-      <telecom use="WP" value="tel:(781)271-3000"/>
-      <addr>
-        <streetAddressLine>202 Burlington Rd.</streetAddressLine>
-        <city>Bedford</city>
-        <state>MA</state>
-        <postalCode>01730</postalCode>
-        <country>US</country>
-      </addr>
-    </representedCustodianOrganization>
-  </assignedCustodian>
-</custodian>
-{{/provider}}

data/lib/qrda-export/catI-r5/qrda_header/_documentation_of_service_event.mustache

@@ -1,82 +0,0 @@
-<documentationOf typeCode="DOC">
-  <serviceEvent classCode="PCPR">
-    <!-- care provision -->
-    <effectiveTime>
-      <low nullFlavor="UNK"/>
-      <high nullFlavor="UNK"/>
-    </effectiveTime>
-    <!-- You can include multiple performers, each with an NPI, TIN, CCN. -->
-    <performer typeCode="PRF">
-      <time>
-        <low nullFlavor="UNK"/>
-        <high nullFlavor="UNK"/>
-      </time>
-      {{#provider}}
-      <assignedEntity>
-        <id extension="{{{provider_npi}}}" root="2.16.840.1.113883.4.6"/>
-        {{#provider_ccn}}
-          <id extension="{{{provider_ccn}}}" root="2.16.840.1.113883.4.336"/>
-        {{/provider_ccn}}
-        <code code="{{{provider_type_code}}}" codeSystem="2.16.840.1.113883.6.101" codeSystemName="Healthcare Provider Taxonomy (HIPAA)"/>
-        {{#provider_addresses}}
-        <addr use="HP">
-          <streetAddressLine>{{{provider_street}}}</streetAddressLine>
-          <city>{{{city}}}</city>
-          <state>{{{state}}}</state>
-          <postalCode>{{{zip}}}</postalCode>
-          <country>{{{country}}}</country>
-        </addr>
-        {{/provider_addresses}}
-        <assignedPerson>
-          <name>
-            <given>{{{given_name}}}</given>
-            <family>{{{family_name}}}</family>
-          </name>
-        </assignedPerson>
-        <representedOrganization>
-          <id extension="{{{provider_tin}}}" root="2.16.840.1.113883.4.2"/>
-          {{#provider_addresses}}
-          <addr use="HP">
-            <streetAddressLine>{{{provider_street}}}</streetAddressLine>
-            <city>{{{city}}}</city>
-            <state>{{{state}}}</state>
-            <postalCode>{{{zip}}}</postalCode>
-            <country>{{{country}}}</country>
-          </addr>
-          {{/provider_addresses}}
-        </representedOrganization>
-      </assignedEntity>
-      {{/provider}}
-      {{^provider}}
-      <assignedEntity>
-        <id extension="1982671962" root="2.16.840.1.113883.4.6"/>
-        <id extension="463132" root="2.16.840.1.113883.4.336"/>
-        <code code="282N00000X" codeSystem="2.16.840.1.113883.6.101" codeSystemName="Healthcare Provider Taxonomy (HIPAA)"/>
-        <addr use="HP">
-          <streetAddressLine>16432 Jayme Viaduct Manor</streetAddressLine>
-          <city>Clairland</city>
-          <state>MS</state>
-          <postalCode>38796</postalCode>
-          <country>US</country>
-        </addr>
-        <assignedPerson>
-          <name>
-            <given>Daryl</given>
-            <family>Carroll</family>
-          </name>
-        </assignedPerson>
-        <representedOrganization>
-          <id extension="695939209" root="2.16.840.1.113883.4.2"/>
-          <addr use="HP">
-            <streetAddressLine>16432 Jayme Viaduct Manor</streetAddressLine>
-            <city>Clairland</city>
-            <state>MS</state>
-            <postalCode>38796</postalCode>
-            <country>US</country>
-          </addr>
-        </representedOrganization>
-      </assignedEntity>
-      {{/provider}}
-    </performer>
-  </serviceEvent>
-</documentationOf>

data/lib/qrda-export/catI-r5/qrda_header/_information_recipient.mustache

@@ -1,7 +0,0 @@
-{{#submission_program}}
-<informationRecipient>
-  <intendedRecipient>
-    <id extension="{{submission_program}}" root="2.16.840.1.113883.3.249.7"/>
-  </intendedRecipient>
-</informationRecipient>
-{{/submission_program}}

data/lib/qrda-export/catI-r5/qrda_header/_legal_authenticator.mustache

@@ -1,25 +0,0 @@
-<legalAuthenticator>
-  <time value="{{{current_time}}}"/>
-  <signatureCode code="S"/>
-  <assignedEntity>
-    <id root="bc01a5d1-3a34-4286-82cc-43eb04c972a7"/>
-    <addr>
-      <streetAddressLine>202 Burlington Rd.</streetAddressLine>
-      <city>Bedford</city>
-      <state>MA</state>
-      <postalCode>01730</postalCode>
-      <country>US</country>
-    </addr>
-    <telecom use="WP" value="tel:(781)271-3000"/>
-    <assignedPerson>
-      <name>
-        <given>Henry</given>
-        <family>Seven</family>
-      </name>
-    </assignedPerson>
-    <representedOrganization>
-      <id root="2.16.840.1.113883.19.5"/>
-      <name>Cypress</name>
-    </representedOrganization>
-  </assignedEntity>
-</legalAuthenticator>

data/lib/qrda-export/catI-r5/qrda_header/_participant.mustache

@@ -1,7 +0,0 @@
-<participant typeCode="DEV">
-  <associatedEntity classCode="RGPR">
-    <!-- CMS EHR Certification Number (formerly known as Office of the 
-        National Coordinator Certification Number) -->
-    <id extension="123456789" root="2.16.840.1.113883.3.2074.1"/>
-  </associatedEntity>
-</participant>

data/lib/qrda-export/catI-r5/qrda_header/_record_target.mustache

@@ -1,28 +0,0 @@
-<recordTarget>
-  <patientRole>
-    <id extension="{{mrn}}" root="1.3.6.1.4.1.115" />
-    <addr use="HP">
-      <streetAddressLine>202 Burlington Rd.</streetAddressLine>
-      <city>Bedford</city>
-      <state>MA</state>
-      <postalCode>01730</postalCode>
-      <country>US</country>
-    </addr>
-    <telecom use="WP" value="tel:+1-781-271-3000"/>
-    <patient>
-      <name>
-        <given>{{{given_name}}}</given>
-        <family>{{family_name}}</family>
-      </name>
-      <administrativeGenderCode code="{{{gender}}}" codeSystem="2.16.840.1.113883.5.1" codeSystemName="HL7 AdministrativeGender"/>
-      <birthTime value="{{{birthdate}}}"/>
-      <raceCode code="{{{race}}}" codeSystemName="CDC Race and Ethnicity" codeSystem="2.16.840.1.113883.6.238"/>
-      <ethnicGroupCode code="{{{ethnic_group}}}" codeSystemName="CDC Race and Ethnicity" codeSystem="2.16.840.1.113883.6.238"/>
-      <languageCommunication>
-        <templateId root="2.16.840.1.113883.3.88.11.83.2" assigningAuthorityName="HITSP/C83"/>
-        <templateId root="1.3.6.1.4.1.19376.1.5.3.1.2.1" assigningAuthorityName="IHE/PCC"/>
-        <languageCode code="eng"/>
-      </languageCommunication>
-    </patient>
-  </patientRole>
-</recordTarget>

data/lib/qrda-export/catI-r5/qrda_templates/adverse_event.mustache

@@ -1,28 +0,0 @@
-<entry>
-  <observation classCode="OBS" moodCode="EVN">
-    <!-- Adverse Event -->
-    <templateId root="2.16.840.1.113883.10.20.24.3.146" extension="2017-08-01"/>
-    <id root="1.3.6.1.4.1.115" extension="{{object_id}}"/>
-    <code code="ASSERTION" codeSystem="2.16.840.1.113883.5.4"/>
-    <statusCode code="completed"/>
-    {{#relevantPeriod}}
-    {{{relevant_period}}}
-    {{/relevantPeriod}}
-        <value xsi:type="CD" 
-           code="281647001" 
-           displayName="Adverse reaction"
-           codeSystem="2.16.840.1.113883.6.96" 
-           codeSystemName="SNOMED CT"/>
-    {{#authorDatetime}}
-    {{> qrda_templates/template_partials/_author}}
-    {{/authorDatetime}}
-    <entryRelationship typeCode="CAUS" inversionInd="true">
-      <observation classCode="OBS" moodCode="EVN">
-        <templateId root="2.16.840.1.113883.10.20.24.3.148" extension="2017-08-01" />
-        <code code="ASSERTION" codeSystem="2.16.840.1.113883.5.4" />
-        <statusCode code="completed" />
-        {{> _values}}
-      </observation>
-  </entryRelationship>
-  </observation>
-</entry>

data/lib/qrda-export/catI-r5/qrda_templates/allergy_intolerance.mustache

@@ -1,28 +0,0 @@
-<entry>
-  <observation classCode="OBS" moodCode="EVN">
-    <!-- Conforms to C-CDA R2.1 Substance or Device Allergy - Intolerance Observation (V2) -->
-    <templateId root="2.16.840.1.113883.10.20.24.3.90" extension="2014-06-09"/>
-    <!-- Allergy Intolerance -->
-    <templateId root="2.16.840.1.113883.10.20.24.3.147" extension="2017-08-01"/>
-    <id root="1.3.6.1.4.1.115" extension="{{object_id}}"/>
-    <code code="ASSERTION" codeSystem="2.16.840.1.113883.5.4"/>
-    <statusCode code="completed"/>
-    {{{prevalence_period}}}
-    <value xsi:type="CD" 
-           code="419199007" 
-           displayName="Allergy to substance"
-           codeSystem="2.16.840.1.113883.6.96" 
-           codeSystemName="SNOMED CT"/>
-    {{#authorDatetime}}
-    {{> qrda_templates/template_partials/_author}}
-    {{/authorDatetime}}
-    <participant typeCode="CSM">
-      <participantRole classCode="MANU">
-        <playingEntity classCode="MMAT">
-          {{> _codes}}
-          <name>{{description}}</name>
-        </playingEntity>
-      </participantRole>
-    </participant>
-  </observation>
-</entry>

data/lib/qrda-export/catI-r5/qrda_templates/assessment_performed.mustache

@@ -1,25 +0,0 @@
-<entry>
-  <observation classCode="OBS" moodCode="EVN" {{{negation_ind}}}>
-    <!-- Assessment Performed -->
-    <templateId root="2.16.840.1.113883.10.20.24.3.144" extension="2017-08-01" />
-    <id root="1.3.6.1.4.1.115" extension="{{object_id}}"/>
-    {{> _codes}}
-    <text>{{description}}</text>
-    <statusCode code="completed"/>
-    {{#relevantPeriod}}
-    {{{relevant_period}}}
-    {{/relevantPeriod}}
-    {{#result}}
-    {{{result_value}}}
-    {{/result}}
-    {{#authorDatetime}}
-    {{> qrda_templates/template_partials/_author}}
-    {{/authorDatetime}}
-    {{#negationRationale}}
-    {{> qrda_templates/template_partials/_reason}}
-    {{/negationRationale}}
-    {{#components}}
-    {{> qrda_templates/template_partials/_component}}
-    {{/components}}
-  </observation>
-</entry>

data/lib/qrda-export/catI-r5/qrda_templates/communication_from_patient_to_provider.mustache

@@ -1,29 +0,0 @@
-<entry>
-  <act classCode="ACT" moodCode="EVN" {{{negation_ind}}}>
-    <!-- Communication from patient to provider -->
-    <templateId root="2.16.840.1.113883.10.20.24.3.2" extension="2017-08-01"/>
-    <id root="1.3.6.1.4.1.115" extension="{{object_id}}"/>
-    {{> _codes}}
-    <text>{{description}}</text>
-    <statusCode code="completed"/>
-    {{#authorDatetime}}
-    {{> qrda_templates/template_partials/_author}}
-    {{/authorDatetime}}
-    <participant typeCode="AUT">
-      <participantRole classCode="PAT">
-        <code code="116154003" codeSystem="2.16.840.1.113883.6.96" codeSystemName="SNOMED CT" displayName="Patient"/>
-      </participantRole>
-    </participant>
-
-    <participant typeCode="IRCP">
-      <participantRole classCode="ASSIGNED">
-        <code code="158965000" codeSystem="2.16.840.1.113883.6.96" codeSystemName="SNOMED CT" displayName="Medical Practitioner"/>
-      </participantRole>
-    </participant>
-
-    {{#negationRationale}}
-    {{> qrda_templates/template_partials/_reason}}
-    {{/negationRationale}}
-
-  </act>
-</entry>