cosmos 4.5.0-java → 4.5.1-java

data/install/config/data/crc.txt

@@ -1,179 +1,179 @@
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 "config/data/README.txt" 0x93B2C07E
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 "config/targets/SYSTEM/cmd_tlm/meta_tlm.txt" 0x07CDABCB
 "config/targets/SYSTEM/target.txt" 0x07E82776
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-"config/tools/handbook_creator/handbook_creator.txt" 0x64E4B5CC
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 "config/tools/handbook_creator/assets/css/bootstrap-theme.min.css" 0xB49F966D
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 "config/tools/handbook_creator/assets/fonts/glyphicons-halflings-regular.ttf" 0x063128D6
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-"config/tools/handbook_creator/assets/js/respond.min.js" 0xD9168C21
-"config/tools/handbook_creator/assets/js/bootstrap.min.js" 0xB3ECDABF
-"config/tools/handbook_creator/assets/js/bootstrap.js" 0x013B0300
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 "config/tools/handbook_creator/assets/img/ball_logo.bmp" 0xAD799C2E
 "config/tools/handbook_creator/assets/img/ball_logo.gif" 0xD8A3D76B
 "config/tools/handbook_creator/assets/img/ball_logo.jpg" 0xA15FB300
+"config/tools/handbook_creator/assets/js/bootstrap.js" 0x013B0300
+"config/tools/handbook_creator/assets/js/bootstrap.min.js" 0xB3ECDABF
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 "config/tools/handbook_creator/default_toc.xsl" 0x00FD130E
+"config/tools/handbook_creator/handbook_creator.txt" 0x64E4B5CC
+"config/tools/handbook_creator/templates/command_packets.html.erb" 0x9897CA7A
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+"config/tools/launcher/launcher.txt" 0x6A3047DB
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 "config/tools/opengl_builder/README.txt" 0x93B2C07E
+"config/tools/script_runner/script_runner.txt" 0x1EECD803
 "config/tools/table_manager/README.txt" 0x93B2C07E
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-"config/tools/data_viewer/data_viewer.txt" 0xAEE0B7DF
 "config/tools/test_runner/test_runner.txt" 0xD24409D2
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 "config/tools/tlm_extractor/README.txt" 0x93B2C07E
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 "tools/CmdSequence" 0x4A13C82C
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 "tools/ConfigEditor" 0xD1205371
-"tools/ToolLaunch.bat" 0x4E6549E0
-"tools/PacketViewer" 0xF23A40BB
-"tools/Launcher" 0xFD4E356C
+"tools/ConfigEditor.bat" 0x2B98E027
 "tools/Dart" 0x19C73FBA
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+"tools/DataViewer" 0x9D20734C
+"tools/DataViewer.bat" 0x2B98E027
+"tools/HandbookCreator" 0xD927814C
 "tools/HandbookCreator.bat" 0x2B98E027
-"tools/TestRunner" 0x0B0E0B8B
-"tools/TlmExtractor.bat" 0x2B98E027
-"tools/ScriptRunner.bat" 0x2B98E027
+"tools/Launcher" 0xFD4E356C
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+"tools/LimitsMonitor.bat" 0x2B98E027
 "tools/OpenGLBuilder" 0x585EA691
-"tools/TlmViewer" 0xFE723189
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+"tools/OpenGLBuilder.bat" 0x2B98E027
+"tools/PacketViewer" 0xF23A40BB
+"tools/PacketViewer.bat" 0x2B98E027
+"tools/Replay" 0xAC00D2AD
 "tools/Replay.bat" 0x2B98E027
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 "tools/TlmExtractor" 0x1EC4639A
-"tools/CmdSender.bat" 0x2B98E027
-"tools/TlmViewer.bat" 0x2B98E027
-"tools/LimitsMonitor.bat" 0x2B98E027
+"tools/TlmExtractor.bat" 0x2B98E027
 "tools/TlmGrapher" 0x9464F502
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+"tools/TlmGrapher.bat" 0x2B98E027
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 "procedures/README.txt" 0x93B2C07E

data/lib/cosmos/config/config_parser.rb

@@ -149,16 +149,8 @@ module Cosmos
       raise Error.new(self, "Partial name '#{template_name}' must begin with an underscore.") if File.basename(template_name)[0] != '_'
       b = binding
       if options[:locals]
-        if RUBY_VERSION.split('.')[0..1].join.to_i >= 21
-          options[:locals].each {|key, value| b.local_variable_set(key, value) }
-        else
-          options[:locals].each do |key, value|
-            if value.is_a? String
-              b.eval("#{key} = '#{value}'")
-            else
-              b.eval("#{key} = #{value}")
-            end
-          end
+        options[:locals].each do |key, value|
+          b.local_variable_set(key, value)
         end
       end
       # Assume the file is there. If not we raise a pretty obvious error

data/lib/cosmos/core_ext/class.rb

@@ -35,6 +35,11 @@ class Class
   #   instance variables with class method readers
   def instance_attr_reader(*args)
     args.each do |arg|
+      # Non-word characters (letter, number, underscore) are disallowed
+      raise ArgumentError, "Non-word characters characters parsed" if arg =~ /\W/
+
+      # Fortify: Dynamic Code Evaluation: Code Injection
+      # This is true but we're whitelisting the input above
       self.class_eval("def #{arg};@#{arg};end")
       self.instance_eval("def #{arg};self.instance.#{arg};end")
     end
@@ -44,6 +49,11 @@ class Class
   #   instance variables with class method accessors (read and write)
   def instance_attr_accessor(*args)
     args.each do |arg|
+      # Non-word characters (letter, number, underscore) are disallowed
+      raise ArgumentError, "Non-word characters characters parsed" if arg =~ /\W/
+
+      # Fortify: Dynamic Code Evaluation: Code Injection
+      # This is true but we're whitelisting the input above
       self.class_eval("def #{arg};@#{arg};end")
       self.instance_eval("def #{arg};self.instance.#{arg};end")
       self.class_eval("def #{arg}=(arg);@#{arg} = arg;end")

data/lib/cosmos/core_ext/time.rb

@@ -88,9 +88,9 @@ class Time
   # use_utc flag.
   def sys
     if @@use_utc
-      self.utc
+      self.dup.utc
     else
-      self.localtime
+      self.dup.localtime
     end
   end
 

data/lib/cosmos/dart/lib/dart_common.rb

@@ -291,11 +291,11 @@ module DartCommon
         reader.open(packet_log.filename)
         @plr_cache[packet_log.id] = reader
       end
-      packet = reader.read_at_offset(ple.data_offset) 
+      packet = reader.read_at_offset(ple.data_offset)
       unless packet
         Cosmos::Logger.error("Failed to read at offset #{ple.data_offset} (file offset: #{reader.bytes_read}) with file size #{reader.size}")
       end
-      return packet 
+      return packet
     rescue Exception => error
       Cosmos::Logger.error("Error Reading Packet Log Entry:\n#{error.formatted}")
       return nil
@@ -668,7 +668,7 @@ module DartCommon
     end
     model.reset_column_information
     model_name = table_name.upcase
-    Cosmos.send(:remove_const, model_name) if Cosmos.const_defined?(model_name)
+    Cosmos.public_send(:remove_const, model_name) if Cosmos.const_defined?(model_name)
     Cosmos.const_set(model_name, model)
   end
 

data/lib/cosmos/dart/spec/dart/dart_database_cleaner_spec.rb

@@ -189,7 +189,7 @@ describe DartDatabaseCleaner do
       end
       model.reset_column_information
       model_name = table_name.upcase
-      Cosmos.send(:remove_const, model_name) if Cosmos.const_defined?(model_name)
+      Cosmos.public_send(:remove_const, model_name) if Cosmos.const_defined?(model_name)
       Cosmos.const_set(model_name, model)
 
       expect(model.column_names).to include("delete_me")
@@ -205,7 +205,7 @@ describe DartDatabaseCleaner do
         end
         model.reset_column_information
         model_name = table_name.upcase
-        Cosmos.send(:remove_const, model_name) if Cosmos.const_defined?(model_name)
+        Cosmos.public_send(:remove_const, model_name) if Cosmos.const_defined?(model_name)
         Cosmos.const_set(model_name, model)
 
         expect(model.column_names).to include("delete_me")

data/lib/cosmos/gui/qt.rb

@@ -101,22 +101,22 @@ module Cosmos
     return color_r if (color_r.is_a? Qt::Color) || (color_r.is_a? Qt::Pen) || (color_r.is_a? Qt::LinearGradient)
 
     color = nil
-    key = color_r
-    key = key.to_i if key.is_a? Qt::Enum
+    color_key = color_r
+    color_key = color_key.to_i if color_key.is_a? Qt::Enum
 
     if color_r && color_g && color_b
-      key = (color_r.to_i << 24) + (color_g.to_i << 16) + (color_b.to_i << 8)
+      color_key = (color_r.to_i << 24) + (color_g.to_i << 16) + (color_b.to_i << 8)
     end
 
-    if Cosmos::COLORS[key]
-      color = Cosmos::COLORS[key]
+    if Cosmos::COLORS[color_key]
+      color = Cosmos::COLORS[color_key]
     else
       if color_r && color_g && color_b
         color = Qt::Color.new(color_r.to_i, color_g.to_i, color_b.to_i)
       else
         color = Qt::Color.new(color_r)
       end
-      Cosmos::COLORS[key] = color
+      Cosmos::COLORS[color_key] = color
     end
     color
   end
@@ -214,12 +214,12 @@ module Cosmos
   end
 
   def self.getCursor(shape)
-    key = shape
-    key = shape.to_i if shape.is_a? Qt::Enum
-    cursor = CURSORS[key]
+    shape_key = shape
+    shape_key = shape.to_i if shape.is_a? Qt::Enum
+    cursor = CURSORS[shape_key]
     unless cursor
       cursor = Qt::Cursor.new(shape)
-      CURSORS[key] = cursor
+      CURSORS[shape_key] = cursor
     end
     cursor
   end

data/lib/cosmos/gui/qt_tool.rb

@@ -61,6 +61,7 @@ module Cosmos
       @stylesheet = File.read(app_style) if File.exist? app_style
 
       self.class.normalize_config_options(@options)
+      setWindowFlags(windowFlags() | Qt::WindowStaysOnTopHint) if @options.stay_on_top
 
       # Add a banner based on system configuration
       add_classification_banner
@@ -350,6 +351,7 @@ module Cosmos
       options.remember_geometry = true
       options.restore_position = true
       options.restore_size = true
+      options.stay_on_top = false
       options.redirect_io = true
       options.title = "COSMOS Tool"
       options.config_file = nil
@@ -401,6 +403,11 @@ module Cosmos
           options.startup_state = :DEFAULT
         end
 
+        # Create the defaultsize option
+        option_parser.on("--stay-on-top", "Force the tool to stay on top of all other windows") do |arg|
+          options.stay_on_top = true
+        end
+
         # Create the x and y position options
         option_parser.separator("")
         option_parser.separator("Window X & Y Position Options:")

data/lib/cosmos/gui/text/completion_text_edit.rb

@@ -17,6 +17,7 @@ module Cosmos
   # This calss also includes many helper methods to access various
   # lines, indent selections, highlight lines and center the view.
   class CompletionTextEdit < Qt::PlainTextEdit
+    attr_accessor :read_only
     # Create a signal so users of CompletionTextEdit don't have to
     # subclass in order to listen to keyPressEvents
     signals 'key_pressed(QKeyEvent*)'
@@ -47,6 +48,7 @@ module Cosmos
 
       @last_hightlighted_line = 1
       @code_completion = nil
+      @read_only = false
       begin
         @code_completion = Completion.new(self)
       rescue

data/lib/cosmos/interfaces/tcpip_server_interface.rb

@@ -298,10 +298,10 @@ module Cosmos
     def change_raw_logging(method)
       if @raw_logger_pair
         @write_interface_infos.each do |interface_info|
-          interface_info.interface.raw_logger_pair.send(method) if interface_info.interface.raw_logger_pair
+          interface_info.interface.raw_logger_pair.public_send(method) if interface_info.interface.raw_logger_pair
         end
         @read_interface_infos.each do |interface_info|
-          interface_info.interface.raw_logger_pair.send(method) if interface_info.interface.raw_logger_pair
+          interface_info.interface.raw_logger_pair.public_send(method) if interface_info.interface.raw_logger_pair
         end
       end
     end
@@ -590,7 +590,7 @@ module Cosmos
           need_disconnect = false
           begin
             interface_bytes_written = interface_info.interface.bytes_written
-            interface_info.interface.send(method, packet_or_data)
+            interface_info.interface.public_send(method, packet_or_data)
             diff = interface_info.interface.bytes_written - interface_bytes_written
             @written_raw_data_time = interface_info.interface.written_raw_data_time
             @written_raw_data = interface_info.interface.written_raw_data

data/lib/cosmos/io/io_multiplexer.rb

@@ -40,11 +40,15 @@ module Cosmos
       result = nil
       @streams.each do |stream|
         if first
-          result = stream.send(method_name, *args)
+          # Fortify Access Specifier Manipulation
+          # We're forwarding only public methods to the stream
+          result = stream.public_send(method_name, *args)
           result = self if result == stream
           first = false
         else
-          stream.send(method_name, *args)
+          # Fortify Access Specifier Manipulation
+          # We're forwarding only public methods to the stream
+          stream.public_send(method_name, *args)
         end
       end
       result

data/lib/cosmos/io/json_drb.rb

@@ -262,7 +262,7 @@ module Cosmos
         if (@method_whitelist and @method_whitelist.include?(request.method.downcase())) or
            (!@method_whitelist and !JsonRpcRequest::DANGEROUS_METHODS.include?(request.method.downcase()))
           begin
-            result = @object.send(request.method.downcase().intern, *request.params)
+            result = @object.public_send(request.method.downcase().intern, *request.params)
             if request.id
               response = JsonRpcSuccessResponse.new(result, request.id)
             end

data/lib/cosmos/packets/packet.rb

@@ -186,9 +186,9 @@ module Cosmos
         @read_conversion_cache.clear if @read_conversion_cache
         @received_count
       end
-      
-    end # if RUBY_ENGINE != 'ruby' or ENV['COSMOS_NO_EXT']      
-      
+
+    end # if RUBY_ENGINE != 'ruby' or ENV['COSMOS_NO_EXT']
+
     # Tries to identify if a buffer represents the currently defined packet. It
     # does this by iterating over all the packet items that were created with
     # an ID value and checking whether that ID value is present at the correct
@@ -216,7 +216,7 @@ module Cosmos
 
       true
     end
-    
+
     # Reads the values from a buffer at the position of each id_item defined
     # in the packet.
     #
@@ -226,7 +226,7 @@ module Cosmos
       return [] unless buffer
       return [] unless @id_items
       values = []
-      
+
       @id_items.each do |item|
         begin
           values << read_item(item, :RAW, buffer)
@@ -234,10 +234,10 @@ module Cosmos
           values << nil
         end
       end
-      
+
       values
     end
-    
+
     # Returns @received_time unless a packet item called PACKET_TIME exists that returns
     # a Ruby Time object that represents a different timestamp for the packet
     def packet_time
@@ -259,7 +259,7 @@ module Cosmos
       end
 
       # Use the hashing algorithm established by Cosmos::System
-      digest = Digest.const_get(System.hashing_algorithm).send('new')
+      digest = Digest.const_get(System.hashing_algorithm).public_send('new')
       digest << string
       @config_name = digest.hexdigest
       @config_name

data/lib/cosmos/packets/packet_config.rb

@@ -443,7 +443,7 @@ module Cosmos
           klass = params[0].filename_to_class_name.to_class
           raise parser.error("#{params[0].filename_to_class_name} class not found. Did you require the file in target.txt?", usage) unless klass
           conversion = klass.new(*params[1..(params.length - 1)])
-          @current_item.send("#{keyword.downcase}=".to_sym, conversion)
+          @current_item.public_send("#{keyword.downcase}=".to_sym, conversion)
           if klass != ProcessorConversion and (conversion.converted_type.nil? or conversion.converted_bit_size.nil?)
             msg = "Read Conversion #{params[0].filename_to_class_name} on item #{@current_item.name} does not specify converted type or bit size. Will not be supported by DART"
             @warnings << msg