conceptql 0.1.1 → 0.2.0

data/spec/spec_helper.rb

@@ -1,70 +1,98 @@
 require 'sequel'
 
-class Minitest::SharedExamples < Module
-  include Minitest::Spec::DSL
+shared_examples_for(:evaluator) do
+  let(:evaluator) { described_class.new }
+  it "should respond to evaluate" do
+    expect(evaluator.respond_to?(:evaluate)).to be true
+  end
 
-  def self.find(name)
-    @shared_examples ||= {}
-    @shared_examples[name]
+  it "should respond to query" do
+    expect(evaluator.respond_to?(:query)).to be true
   end
 
-  def self.register(name, &block)
-    @shared_examples ||= {}
-    @shared_examples[name] = block
+  it "shoudl respond to types" do
+    expect(evaluator.respond_to?(:types)).to be true
   end
 end
 
-def shared_examples_for(name, &block)
-  Minitest::SharedExamples.register(name, &block)
-end
+shared_examples_for(:source_vocabulary_operator) do
+  let(:source_vocabulary_operator) { described_class.new }
+  it_behaves_like :evaluator
 
-shared_examples_for(:evaluator) do |subject|
-  subject.must_respond_to(:evaluate)
-  subject.must_respond_to(:query)
-  subject.must_respond_to(:types)
-end
+  it "should respond to #table" do
+    expect(source_vocabulary_operator.respond_to?(:table)).to be true
+  end
 
-shared_examples_for(:source_vocabulary_node) do |subject|
-  subject.must_behave_like(:evaluator)
-  subject.must_respond_to(:table)
-  subject.must_respond_to(:concept_column)
-  subject.must_respond_to(:source_column)
-  subject.must_respond_to(:vocabulary_id)
-end
+  it "should respond to #concept_column" do
+    expect(source_vocabulary_operator.respond_to?(:concept_column)).to be true
+  end
 
-shared_examples_for(:standard_vocabulary_node) do |subject|
-  subject.must_behave_like(:evaluator)
-  subject.must_respond_to(:table)
-  subject.must_respond_to(:concept_column)
-  subject.must_respond_to(:vocabulary_id)
-end
+  it "should respond to #source_column" do
+    expect(source_vocabulary_operator.respond_to?(:source_column)).to be true
+  end
 
-shared_examples_for(:node) do |subject|
-  subject.must_respond_to(:values)
-  subject.must_respond_to(:arguments)
-  subject.must_respond_to(:children)
+  it "should respond to #vocabulary_id" do
+    expect(source_vocabulary_operator.respond_to?(:vocabulary_id)).to be true
+  end
 end
 
-shared_examples_for(:temporal_node) do |subject|
-  subject.must_behave_like(:evaluator)
-  subject.must_respond_to(:where_clause)
+shared_examples_for(:standard_vocabulary_operator) do
+  let(:standard_vocabulary_operator) { described_class.new }
+
+  it_behaves_like :evaluator
+
+  it "should respond to #table" do
+    expect(standard_vocabulary_operator.respond_to?(:table)).to be true
+  end
+
+  it "should respond to #concept_column" do
+    expect(standard_vocabulary_operator.respond_to?(:concept_column)).to be true
+  end
+
+  it "should respond to #vocabulary_id" do
+    expect(standard_vocabulary_operator.respond_to?(:vocabulary_id)).to be true
+  end
 end
 
-shared_examples_for(:casting_node) do |subject|
-  subject.must_behave_like(:evaluator)
-  subject.must_respond_to(:my_type)
-  subject.must_respond_to(:i_point_at)
-  subject.must_respond_to(:these_point_at_me)
+shared_examples_for(:operator) do
+  let(:operator) { described_class.new }
+
+  it "should respond to #values" do
+    expect(operator.respond_to?(:values)).to be true
+  end
+
+  it "should respond to #arguments" do
+    expect(operator.respond_to?(:arguments)).to be true
+  end
+
+  it "should respond to #upstreams" do
+    expect(operator.respond_to?(:upstreams)).to be true
+  end
 end
 
-module Minitest::Assertions
-  def assert_behaves_like(subject, name, msg = nil)
-    Minitest::SharedExamples.find(name).call(subject)
+shared_examples_for(:temporal_operator) do
+  let(:temporal_operator) { described_class.new }
+
+  it "should respond to #where_clause" do
+    expect(temporal_operator.respond_to?(:where_clause)).to be true
   end
 end
 
-module Minitest::Expectations
-  infect_an_assertion :assert_behaves_like, :must_behave_like, :reverse
+shared_examples_for(:casting_operator) do
+  let(:casting_operator) { described_class.new }
+  it_behaves_like(:evaluator)
+
+  it "should respond to #my_type" do
+    expect(casting_operator.respond_to?(:my_type)).to be true
+  end
+
+  it "should respond to #i_point_at" do
+    expect(casting_operator.respond_to?(:i_point_at)).to be true
+  end
+
+  it "should respond to #these_point_at_me" do
+    expect(casting_operator.respond_to?(:these_point_at_me)).to be true
+  end
 end
 
 def require_double(double_name)
@@ -72,15 +100,3 @@ def require_double(double_name)
   p = p + 'spec' + 'doubles' + (double_name + '_double')
   require(p.expand_path)
 end
-
-def stub_const(klass, const, replace, &block)
-  klass.send(:const_set, const, replace)
-  if block_given?
-    yield
-    remove_stubbed_const(klass, const)
-  end
-end
-
-def remove_stubbed_const(klass, const)
-  klass.send(:remove_const, const)
-end

metadata

@@ -1,29 +1,29 @@
 --- !ruby/object:Gem::Specification
 name: conceptql
 version: !ruby/object:Gem::Version
-  version: 0.1.1
+  version: 0.2.0
 platform: ruby
 authors:
 - Ryan Duryea
 autorequire: 
 bindir: bin
 cert_chain: []
-date: 2014-09-18 00:00:00.000000000 Z
+date: 2015-12-11 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
-  name: activesupport
+  name: facets
   requirement: !ruby/object:Gem::Requirement
     requirements:
     - - "~>"
       - !ruby/object:Gem::Version
-        version: '4.1'
+        version: '3.0'
   type: :runtime
   prerelease: false
   version_requirements: !ruby/object:Gem::Requirement
     requirements:
     - - "~>"
       - !ruby/object:Gem::Version
-        version: '4.1'
+        version: '3.0'
 - !ruby/object:Gem::Dependency
   name: sequelizer
   requirement: !ruby/object:Gem::Requirement
@@ -80,6 +80,20 @@ dependencies:
     - - "~>"
       - !ruby/object:Gem::Version
         version: '1.2'
+- !ruby/object:Gem::Dependency
+  name: csv2xlsx
+  requirement: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: '0'
+  type: :runtime
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: '0'
 - !ruby/object:Gem::Dependency
   name: bundler
   requirement: !ruby/object:Gem::Requirement
@@ -109,33 +123,47 @@ dependencies:
       - !ruby/object:Gem::Version
         version: '10.3'
 - !ruby/object:Gem::Dependency
-  name: minitest
+  name: rspec
+  requirement: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: '3.2'
+  type: :development
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: '3.2'
+- !ruby/object:Gem::Dependency
+  name: guard-rspec
   requirement: !ruby/object:Gem::Requirement
     requirements:
     - - "~>"
       - !ruby/object:Gem::Version
-        version: '5.4'
+        version: '4.5'
   type: :development
   prerelease: false
   version_requirements: !ruby/object:Gem::Requirement
     requirements:
     - - "~>"
       - !ruby/object:Gem::Version
-        version: '5.4'
+        version: '4.5'
 - !ruby/object:Gem::Dependency
-  name: guard-minitest
+  name: byebug
   requirement: !ruby/object:Gem::Requirement
     requirements:
     - - "~>"
       - !ruby/object:Gem::Version
-        version: '2.3'
+        version: '4.0'
   type: :development
   prerelease: false
   version_requirements: !ruby/object:Gem::Requirement
     requirements:
     - - "~>"
       - !ruby/object:Gem::Version
-        version: '2.3'
+        version: '4.0'
 description: ConceptQL is a query language for specifying queries to be run OMOP CDMv4
   structured data
 email:
@@ -159,103 +187,135 @@ files:
 - doc/implementation_notes.md
 - doc/spec.md
 - lib/conceptql.rb
+- lib/conceptql/behaviors/debuggable.rb
 - lib/conceptql/behaviors/dottable.rb
+- lib/conceptql/behaviors/metadatable.rb
+- lib/conceptql/behaviors/preppable.rb
 - lib/conceptql/cli.rb
+- lib/conceptql/converter.rb
 - lib/conceptql/date_adjuster.rb
+- lib/conceptql/debugger.rb
 - lib/conceptql/fake_grapher.rb
 - lib/conceptql/graph.rb
 - lib/conceptql/graph_nodifier.rb
 - lib/conceptql/logger.rb
-- lib/conceptql/nodes/after.rb
-- lib/conceptql/nodes/before.rb
-- lib/conceptql/nodes/binary_operator_node.rb
-- lib/conceptql/nodes/casting_node.rb
-- lib/conceptql/nodes/complement.rb
-- lib/conceptql/nodes/concept.rb
-- lib/conceptql/nodes/condition_type.rb
-- lib/conceptql/nodes/count.rb
-- lib/conceptql/nodes/cpt.rb
-- lib/conceptql/nodes/date_range.rb
-- lib/conceptql/nodes/death.rb
-- lib/conceptql/nodes/define.rb
-- lib/conceptql/nodes/drug_type_concept.rb
-- lib/conceptql/nodes/during.rb
-- lib/conceptql/nodes/equal.rb
-- lib/conceptql/nodes/except.rb
-- lib/conceptql/nodes/first.rb
-- lib/conceptql/nodes/from.rb
-- lib/conceptql/nodes/gender.rb
-- lib/conceptql/nodes/hcpcs.rb
-- lib/conceptql/nodes/icd10.rb
-- lib/conceptql/nodes/icd9.rb
-- lib/conceptql/nodes/icd9_procedure.rb
-- lib/conceptql/nodes/intersect.rb
-- lib/conceptql/nodes/last.rb
-- lib/conceptql/nodes/loinc.rb
-- lib/conceptql/nodes/node.rb
-- lib/conceptql/nodes/numeric.rb
-- lib/conceptql/nodes/occurrence.rb
-- lib/conceptql/nodes/pass_thru.rb
-- lib/conceptql/nodes/person.rb
-- lib/conceptql/nodes/person_filter.rb
-- lib/conceptql/nodes/place_of_service_code.rb
-- lib/conceptql/nodes/procedure_occurrence.rb
-- lib/conceptql/nodes/race.rb
-- lib/conceptql/nodes/recall.rb
-- lib/conceptql/nodes/rxnorm.rb
-- lib/conceptql/nodes/snomed.rb
-- lib/conceptql/nodes/source_vocabulary_node.rb
-- lib/conceptql/nodes/standard_vocabulary_node.rb
-- lib/conceptql/nodes/started_by.rb
-- lib/conceptql/nodes/sum.rb
-- lib/conceptql/nodes/temporal_node.rb
-- lib/conceptql/nodes/time_window.rb
-- lib/conceptql/nodes/union.rb
-- lib/conceptql/nodes/visit.rb
-- lib/conceptql/nodes/visit_occurrence.rb
 - lib/conceptql/nodifier.rb
+- lib/conceptql/operators/after.rb
+- lib/conceptql/operators/any_overlap.rb
+- lib/conceptql/operators/before.rb
+- lib/conceptql/operators/binary_operator_operator.rb
+- lib/conceptql/operators/casting_operator.rb
+- lib/conceptql/operators/complement.rb
+- lib/conceptql/operators/concept.rb
+- lib/conceptql/operators/condition_type.rb
+- lib/conceptql/operators/contains.rb
+- lib/conceptql/operators/count.rb
+- lib/conceptql/operators/cpt.rb
+- lib/conceptql/operators/date_range.rb
+- lib/conceptql/operators/death.rb
+- lib/conceptql/operators/drug_type_concept.rb
+- lib/conceptql/operators/during.rb
+- lib/conceptql/operators/equal.rb
+- lib/conceptql/operators/except.rb
+- lib/conceptql/operators/filter.rb
+- lib/conceptql/operators/first.rb
+- lib/conceptql/operators/from.rb
+- lib/conceptql/operators/from_seer_visits.rb
+- lib/conceptql/operators/gender.rb
+- lib/conceptql/operators/hcpcs.rb
+- lib/conceptql/operators/icd10.rb
+- lib/conceptql/operators/icd9.rb
+- lib/conceptql/operators/icd9_procedure.rb
+- lib/conceptql/operators/intersect.rb
+- lib/conceptql/operators/last.rb
+- lib/conceptql/operators/loinc.rb
+- lib/conceptql/operators/medcode.rb
+- lib/conceptql/operators/medcode_procedure.rb
+- lib/conceptql/operators/ndc.rb
+- lib/conceptql/operators/numeric.rb
+- lib/conceptql/operators/observation_by_enttype.rb
+- lib/conceptql/operators/observation_period.rb
+- lib/conceptql/operators/occurrence.rb
+- lib/conceptql/operators/one_in_two_out.rb
+- lib/conceptql/operators/operator.rb
+- lib/conceptql/operators/overlapped_by.rb
+- lib/conceptql/operators/overlaps.rb
+- lib/conceptql/operators/pass_thru.rb
+- lib/conceptql/operators/person.rb
+- lib/conceptql/operators/person_filter.rb
+- lib/conceptql/operators/place_of_service_code.rb
+- lib/conceptql/operators/procedure_occurrence.rb
+- lib/conceptql/operators/prodcode.rb
+- lib/conceptql/operators/race.rb
+- lib/conceptql/operators/recall.rb
+- lib/conceptql/operators/rxnorm.rb
+- lib/conceptql/operators/snomed.rb
+- lib/conceptql/operators/snomed_condition.rb
+- lib/conceptql/operators/source_vocabulary_operator.rb
+- lib/conceptql/operators/standard_vocabulary_operator.rb
+- lib/conceptql/operators/started_by.rb
+- lib/conceptql/operators/sum.rb
+- lib/conceptql/operators/temporal_operator.rb
+- lib/conceptql/operators/time_window.rb
+- lib/conceptql/operators/to_seer_visits.rb
+- lib/conceptql/operators/trim_date_end.rb
+- lib/conceptql/operators/trim_date_start.rb
+- lib/conceptql/operators/union.rb
+- lib/conceptql/operators/visit.rb
+- lib/conceptql/operators/visit_occurrence.rb
 - lib/conceptql/query.rb
+- lib/conceptql/scope.rb
 - lib/conceptql/tree.rb
+- lib/conceptql/utils/temp_table.rb
 - lib/conceptql/version.rb
 - spec/conceptql/behaviors/dottable_spec.rb
+- spec/conceptql/converter_spec.rb
 - spec/conceptql/date_adjuster_spec.rb
-- spec/conceptql/nodes/after_spec.rb
-- spec/conceptql/nodes/before_spec.rb
-- spec/conceptql/nodes/casting_node_spec.rb
-- spec/conceptql/nodes/complement_spec.rb
-- spec/conceptql/nodes/concept_spec.rb
-- spec/conceptql/nodes/condition_type_spec.rb
-- spec/conceptql/nodes/cpt_spec.rb
-- spec/conceptql/nodes/date_range_spec.rb
-- spec/conceptql/nodes/death_spec.rb
-- spec/conceptql/nodes/during_spec.rb
-- spec/conceptql/nodes/except_spec.rb
-- spec/conceptql/nodes/first_spec.rb
-- spec/conceptql/nodes/from_spec.rb
-- spec/conceptql/nodes/gender_spec.rb
-- spec/conceptql/nodes/hcpcs_spec.rb
-- spec/conceptql/nodes/icd10_spec.rb
-- spec/conceptql/nodes/icd9_procedure_spec.rb
-- spec/conceptql/nodes/icd9_spec.rb
-- spec/conceptql/nodes/intersect_spec.rb
-- spec/conceptql/nodes/last_spec.rb
-- spec/conceptql/nodes/loinc_spec.rb
-- spec/conceptql/nodes/occurrence_spec.rb
-- spec/conceptql/nodes/person_filter_spec.rb
-- spec/conceptql/nodes/person_spec.rb
-- spec/conceptql/nodes/place_of_service_code_spec.rb
-- spec/conceptql/nodes/procedure_occurrence_spec.rb
-- spec/conceptql/nodes/query_double.rb
-- spec/conceptql/nodes/race_spec.rb
-- spec/conceptql/nodes/rxnorm_spec.rb
-- spec/conceptql/nodes/snomed_spec.rb
-- spec/conceptql/nodes/source_vocabulary_node_spec.rb
-- spec/conceptql/nodes/standard_vocabulary_node_spec.rb
-- spec/conceptql/nodes/started_by_spec.rb
-- spec/conceptql/nodes/temporal_node_spec.rb
-- spec/conceptql/nodes/time_window_spec.rb
-- spec/conceptql/nodes/union_spec.rb
-- spec/conceptql/nodes/visit_occurrence_spec.rb
+- spec/conceptql/operators/after_spec.rb
+- spec/conceptql/operators/before_spec.rb
+- spec/conceptql/operators/casting_operator_spec.rb
+- spec/conceptql/operators/complement_spec.rb
+- spec/conceptql/operators/concept_spec.rb
+- spec/conceptql/operators/condition_type_spec.rb
+- spec/conceptql/operators/contains_spec.rb
+- spec/conceptql/operators/cpt_spec.rb
+- spec/conceptql/operators/date_range_spec.rb
+- spec/conceptql/operators/death_spec.rb
+- spec/conceptql/operators/during_spec.rb
+- spec/conceptql/operators/except_spec.rb
+- spec/conceptql/operators/first_spec.rb
+- spec/conceptql/operators/from_spec.rb
+- spec/conceptql/operators/gender_spec.rb
+- spec/conceptql/operators/hcpcs_spec.rb
+- spec/conceptql/operators/icd10_spec.rb
+- spec/conceptql/operators/icd9_procedure_spec.rb
+- spec/conceptql/operators/icd9_spec.rb
+- spec/conceptql/operators/intersect_spec.rb
+- spec/conceptql/operators/last_spec.rb
+- spec/conceptql/operators/loinc_spec.rb
+- spec/conceptql/operators/medcode_procedure_spec.rb
+- spec/conceptql/operators/medcode_spec.rb
+- spec/conceptql/operators/observation_period_spec.rb
+- spec/conceptql/operators/occurrence_spec.rb
+- spec/conceptql/operators/overlapped_by_spec.rb
+- spec/conceptql/operators/overlaps_spec.rb
+- spec/conceptql/operators/person_filter_spec.rb
+- spec/conceptql/operators/person_spec.rb
+- spec/conceptql/operators/place_of_service_code_spec.rb
+- spec/conceptql/operators/procedure_occurrence_spec.rb
+- spec/conceptql/operators/prodcode_spec.rb
+- spec/conceptql/operators/query_double.rb
+- spec/conceptql/operators/query_double_spec.rb
+- spec/conceptql/operators/race_spec.rb
+- spec/conceptql/operators/rxnorm_spec.rb
+- spec/conceptql/operators/snomed_spec.rb
+- spec/conceptql/operators/source_vocabulary_operator_spec.rb
+- spec/conceptql/operators/standard_vocabulary_operator_spec.rb
+- spec/conceptql/operators/started_by_spec.rb
+- spec/conceptql/operators/temporal_operator_spec.rb
+- spec/conceptql/operators/time_window_spec.rb
+- spec/conceptql/operators/union_spec.rb
+- spec/conceptql/operators/visit_occurrence_spec.rb
 - spec/conceptql/query_spec.rb
 - spec/conceptql/tree_spec.rb
 - spec/doubles/stream_for_casting_double.rb
@@ -282,50 +342,59 @@ required_rubygems_version: !ruby/object:Gem::Requirement
       version: '0'
 requirements: []
 rubyforge_project: 
-rubygems_version: 2.2.2
+rubygems_version: 2.4.5.1
 signing_key: 
 specification_version: 4
 summary: Generate OMOP CDMv4-compatible queries from a ConceptQL file
 test_files:
 - spec/conceptql/behaviors/dottable_spec.rb
+- spec/conceptql/converter_spec.rb
 - spec/conceptql/date_adjuster_spec.rb
-- spec/conceptql/nodes/after_spec.rb
-- spec/conceptql/nodes/before_spec.rb
-- spec/conceptql/nodes/casting_node_spec.rb
-- spec/conceptql/nodes/complement_spec.rb
-- spec/conceptql/nodes/concept_spec.rb
-- spec/conceptql/nodes/condition_type_spec.rb
-- spec/conceptql/nodes/cpt_spec.rb
-- spec/conceptql/nodes/date_range_spec.rb
-- spec/conceptql/nodes/death_spec.rb
-- spec/conceptql/nodes/during_spec.rb
-- spec/conceptql/nodes/except_spec.rb
-- spec/conceptql/nodes/first_spec.rb
-- spec/conceptql/nodes/from_spec.rb
-- spec/conceptql/nodes/gender_spec.rb
-- spec/conceptql/nodes/hcpcs_spec.rb
-- spec/conceptql/nodes/icd10_spec.rb
-- spec/conceptql/nodes/icd9_procedure_spec.rb
-- spec/conceptql/nodes/icd9_spec.rb
-- spec/conceptql/nodes/intersect_spec.rb
-- spec/conceptql/nodes/last_spec.rb
-- spec/conceptql/nodes/loinc_spec.rb
-- spec/conceptql/nodes/occurrence_spec.rb
-- spec/conceptql/nodes/person_filter_spec.rb
-- spec/conceptql/nodes/person_spec.rb
-- spec/conceptql/nodes/place_of_service_code_spec.rb
-- spec/conceptql/nodes/procedure_occurrence_spec.rb
-- spec/conceptql/nodes/query_double.rb
-- spec/conceptql/nodes/race_spec.rb
-- spec/conceptql/nodes/rxnorm_spec.rb
-- spec/conceptql/nodes/snomed_spec.rb
-- spec/conceptql/nodes/source_vocabulary_node_spec.rb
-- spec/conceptql/nodes/standard_vocabulary_node_spec.rb
-- spec/conceptql/nodes/started_by_spec.rb
-- spec/conceptql/nodes/temporal_node_spec.rb
-- spec/conceptql/nodes/time_window_spec.rb
-- spec/conceptql/nodes/union_spec.rb
-- spec/conceptql/nodes/visit_occurrence_spec.rb
+- spec/conceptql/operators/after_spec.rb
+- spec/conceptql/operators/before_spec.rb
+- spec/conceptql/operators/casting_operator_spec.rb
+- spec/conceptql/operators/complement_spec.rb
+- spec/conceptql/operators/concept_spec.rb
+- spec/conceptql/operators/condition_type_spec.rb
+- spec/conceptql/operators/contains_spec.rb
+- spec/conceptql/operators/cpt_spec.rb
+- spec/conceptql/operators/date_range_spec.rb
+- spec/conceptql/operators/death_spec.rb
+- spec/conceptql/operators/during_spec.rb
+- spec/conceptql/operators/except_spec.rb
+- spec/conceptql/operators/first_spec.rb
+- spec/conceptql/operators/from_spec.rb
+- spec/conceptql/operators/gender_spec.rb
+- spec/conceptql/operators/hcpcs_spec.rb
+- spec/conceptql/operators/icd10_spec.rb
+- spec/conceptql/operators/icd9_procedure_spec.rb
+- spec/conceptql/operators/icd9_spec.rb
+- spec/conceptql/operators/intersect_spec.rb
+- spec/conceptql/operators/last_spec.rb
+- spec/conceptql/operators/loinc_spec.rb
+- spec/conceptql/operators/medcode_procedure_spec.rb
+- spec/conceptql/operators/medcode_spec.rb
+- spec/conceptql/operators/observation_period_spec.rb
+- spec/conceptql/operators/occurrence_spec.rb
+- spec/conceptql/operators/overlapped_by_spec.rb
+- spec/conceptql/operators/overlaps_spec.rb
+- spec/conceptql/operators/person_filter_spec.rb
+- spec/conceptql/operators/person_spec.rb
+- spec/conceptql/operators/place_of_service_code_spec.rb
+- spec/conceptql/operators/procedure_occurrence_spec.rb
+- spec/conceptql/operators/prodcode_spec.rb
+- spec/conceptql/operators/query_double.rb
+- spec/conceptql/operators/query_double_spec.rb
+- spec/conceptql/operators/race_spec.rb
+- spec/conceptql/operators/rxnorm_spec.rb
+- spec/conceptql/operators/snomed_spec.rb
+- spec/conceptql/operators/source_vocabulary_operator_spec.rb
+- spec/conceptql/operators/standard_vocabulary_operator_spec.rb
+- spec/conceptql/operators/started_by_spec.rb
+- spec/conceptql/operators/temporal_operator_spec.rb
+- spec/conceptql/operators/time_window_spec.rb
+- spec/conceptql/operators/union_spec.rb
+- spec/conceptql/operators/visit_occurrence_spec.rb
 - spec/conceptql/query_spec.rb
 - spec/conceptql/tree_spec.rb
 - spec/doubles/stream_for_casting_double.rb

data/lib/conceptql/nodes/after.rb

@@ -1,12 +0,0 @@
-require_relative 'temporal_node'
-
-module ConceptQL
-  module Nodes
-    class After < TemporalNode
-      def where_clause
-        Proc.new { l__start_date > r__end_date }
-      end
-    end
-  end
-end
-

data/lib/conceptql/nodes/before.rb

@@ -1,11 +0,0 @@
-require_relative 'temporal_node'
-
-module ConceptQL
-  module Nodes
-    class Before < TemporalNode
-      def where_clause
-        Proc.new { l__end_date < r__start_date }
-      end
-    end
-  end
-end

data/lib/conceptql/nodes/concept.rb

@@ -1,38 +0,0 @@
-require_relative 'node'
-require_relative '../tree'
-
-module ConceptQL
-  module Nodes
-    class Concept < Node
-      attr :statement
-      def query(db)
-        set_statement(db)
-        stream.evaluate(db)
-      end
-
-      def children
-        @children ||= [ Tree.new.root(self) ]
-      end
-
-      def graph_prep(db)
-        set_statement(db)
-        @arguments = [description(db)]
-      end
-
-      private
-      def set_statement(db)
-        @statement ||= db[:concepts].where(concept_id: arguments.first).select_map(:statement).first.tap { |f| ConceptQL.logger.debug f.inspect }.to_hash
-      end
-
-      def description(db)
-        @description ||= db[:concepts].where(concept_id: arguments.first).select_map(:label).first
-      end
-
-      def db
-        tree.db
-      end
-    end
-  end
-end
-
-