charty 0.2.3 → 0.2.8
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- checksums.yaml +4 -4
- data/.github/workflows/ci.yml +56 -23
- data/.github/workflows/nmatrix.yml +67 -0
- data/.github/workflows/pycall.yml +86 -0
- data/Gemfile +18 -0
- data/README.md +172 -4
- data/Rakefile +4 -5
- data/charty.gemspec +10 -6
- data/examples/sample_images/hist_gruff.png +0 -0
- data/images/penguins_body_mass_g_flipper_length_mm_scatter_plot.png +0 -0
- data/images/penguins_body_mass_g_flipper_length_mm_species_scatter_plot.png +0 -0
- data/images/penguins_body_mass_g_flipper_length_mm_species_sex_scatter_plot.png +0 -0
- data/images/penguins_species_body_mass_g_bar_plot_h.png +0 -0
- data/images/penguins_species_body_mass_g_bar_plot_v.png +0 -0
- data/images/penguins_species_body_mass_g_box_plot_h.png +0 -0
- data/images/penguins_species_body_mass_g_box_plot_v.png +0 -0
- data/images/penguins_species_body_mass_g_sex_bar_plot_v.png +0 -0
- data/images/penguins_species_body_mass_g_sex_box_plot_v.png +0 -0
- data/lib/charty.rb +8 -1
- data/lib/charty/backends/bokeh.rb +2 -2
- data/lib/charty/backends/google_charts.rb +1 -1
- data/lib/charty/backends/gruff.rb +14 -3
- data/lib/charty/backends/plotly.rb +731 -32
- data/lib/charty/backends/plotly_helpers/html_renderer.rb +203 -0
- data/lib/charty/backends/plotly_helpers/notebook_renderer.rb +87 -0
- data/lib/charty/backends/plotly_helpers/plotly_renderer.rb +121 -0
- data/lib/charty/backends/pyplot.rb +514 -66
- data/lib/charty/backends/rubyplot.rb +1 -1
- data/lib/charty/cache_dir.rb +27 -0
- data/lib/charty/dash_pattern_generator.rb +57 -0
- data/lib/charty/index.rb +213 -0
- data/lib/charty/iruby_helper.rb +18 -0
- data/lib/charty/linspace.rb +1 -1
- data/lib/charty/plot_methods.rb +283 -8
- data/lib/charty/plotter.rb +2 -2
- data/lib/charty/plotters.rb +11 -0
- data/lib/charty/plotters/abstract_plotter.rb +186 -16
- data/lib/charty/plotters/bar_plotter.rb +189 -7
- data/lib/charty/plotters/box_plotter.rb +64 -11
- data/lib/charty/plotters/categorical_plotter.rb +272 -40
- data/lib/charty/plotters/count_plotter.rb +7 -0
- data/lib/charty/plotters/distribution_plotter.rb +143 -0
- data/lib/charty/plotters/estimation_support.rb +84 -0
- data/lib/charty/plotters/histogram_plotter.rb +186 -0
- data/lib/charty/plotters/line_plotter.rb +300 -0
- data/lib/charty/plotters/random_support.rb +25 -0
- data/lib/charty/plotters/relational_plotter.rb +635 -0
- data/lib/charty/plotters/scatter_plotter.rb +80 -0
- data/lib/charty/plotters/vector_plotter.rb +6 -0
- data/lib/charty/statistics.rb +96 -2
- data/lib/charty/table.rb +160 -15
- data/lib/charty/table_adapters.rb +2 -0
- data/lib/charty/table_adapters/active_record_adapter.rb +17 -9
- data/lib/charty/table_adapters/base_adapter.rb +166 -0
- data/lib/charty/table_adapters/daru_adapter.rb +39 -3
- data/lib/charty/table_adapters/datasets_adapter.rb +13 -2
- data/lib/charty/table_adapters/hash_adapter.rb +141 -16
- data/lib/charty/table_adapters/narray_adapter.rb +25 -6
- data/lib/charty/table_adapters/nmatrix_adapter.rb +15 -5
- data/lib/charty/table_adapters/pandas_adapter.rb +163 -0
- data/lib/charty/util.rb +28 -0
- data/lib/charty/vector.rb +69 -0
- data/lib/charty/vector_adapters.rb +187 -0
- data/lib/charty/vector_adapters/array_adapter.rb +101 -0
- data/lib/charty/vector_adapters/daru_adapter.rb +163 -0
- data/lib/charty/vector_adapters/narray_adapter.rb +182 -0
- data/lib/charty/vector_adapters/nmatrix_adapter.rb +37 -0
- data/lib/charty/vector_adapters/numpy_adapter.rb +168 -0
- data/lib/charty/vector_adapters/pandas_adapter.rb +199 -0
- data/lib/charty/version.rb +1 -1
- metadata +92 -25
data/Rakefile
CHANGED
@@ -1,10 +1,9 @@
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1
1
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require "bundler/gem_tasks"
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2
2
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require "rake/testtask"
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3
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-
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5
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-
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6
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-
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7
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-
t.test_files = FileList['test/**/*_test.rb']
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4
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+
desc "Run tests"
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5
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+
task :test do
|
6
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+
ruby("test/run.rb")
|
8
7
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end
|
9
8
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|
10
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-
task :
|
9
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+
task default: :test
|
data/charty.gemspec
CHANGED
@@ -26,16 +26,20 @@ Gem::Specification.new do |spec|
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|
26
26
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spec.executables = spec.files.grep(%r{^exe/}) { |f| File.basename(f) }
|
27
27
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spec.require_paths = ["lib"]
|
28
28
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|
29
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-
spec.add_dependency "red-colors"
|
30
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-
spec.add_dependency "red-
|
29
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+
spec.add_dependency "red-colors", ">= 0.3.0"
|
30
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+
spec.add_dependency "red-datasets", ">= 0.1.2"
|
31
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+
spec.add_dependency "red-palette", ">= 0.5.0"
|
32
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+
|
33
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+
spec.add_dependency "matplotlib", ">= 1.2.0"
|
34
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+
spec.add_dependency "pandas", ">= 0.3.5"
|
35
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+
spec.add_dependency "playwright-ruby-client"
|
36
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+
|
31
37
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spec.add_development_dependency "bundler", ">= 1.16"
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spec.add_development_dependency "rake"
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33
39
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spec.add_development_dependency "test-unit"
|
34
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-
spec.add_development_dependency "numo-narray"
|
35
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-
spec.add_development_dependency "nmatrix"
|
36
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-
spec.add_development_dependency "red-datasets", ">= 0.0.9"
|
37
40
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spec.add_development_dependency "daru"
|
41
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+
spec.add_development_dependency "matrix" # need for daru on Ruby > 3.0
|
38
42
|
spec.add_development_dependency "activerecord"
|
39
43
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spec.add_development_dependency "sqlite3"
|
40
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-
spec.add_development_dependency "
|
44
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+
spec.add_development_dependency "iruby", ">= 0.7.0"
|
41
45
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end
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data/lib/charty.rb
CHANGED
@@ -3,13 +3,20 @@ require_relative "charty/version"
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3
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require "colors"
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4
4
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require "palette"
|
5
5
|
|
6
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+
require_relative "charty/cache_dir"
|
7
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+
require_relative "charty/util"
|
8
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+
require_relative "charty/iruby_helper"
|
9
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+
require_relative "charty/dash_pattern_generator"
|
6
10
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require_relative "charty/backends"
|
7
11
|
require_relative "charty/backend_methods"
|
8
12
|
require_relative "charty/plotter"
|
13
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+
require_relative "charty/index"
|
9
14
|
require_relative "charty/layout"
|
10
15
|
require_relative "charty/linspace"
|
11
16
|
require_relative "charty/plotters"
|
12
17
|
require_relative "charty/plot_methods"
|
13
|
-
require_relative "charty/table_adapters"
|
14
18
|
require_relative "charty/table"
|
19
|
+
require_relative "charty/table_adapters"
|
15
20
|
require_relative "charty/statistics"
|
21
|
+
require_relative "charty/vector_adapters"
|
22
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+
require_relative "charty/vector"
|
@@ -17,13 +17,13 @@ module Charty
|
|
17
17
|
@series = series
|
18
18
|
end
|
19
19
|
|
20
|
-
def
|
20
|
+
def old_style_render(context, filename)
|
21
21
|
plot = plot(context)
|
22
22
|
save(plot, context, filename)
|
23
23
|
PyCall.import_module('bokeh.io').show(plot)
|
24
24
|
end
|
25
25
|
|
26
|
-
def
|
26
|
+
def old_style_save(plot, context, filename)
|
27
27
|
if filename
|
28
28
|
PyCall.import_module('bokeh.io').save(plot, filename)
|
29
29
|
end
|
@@ -26,7 +26,7 @@ module Charty
|
|
26
26
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raise NotImplementedError
|
27
27
|
end
|
28
28
|
|
29
|
-
def
|
29
|
+
def old_style_render(context, filename="")
|
30
30
|
FileUtils.mkdir_p(File.dirname(filename))
|
31
31
|
plot(@plot, context).write(filename)
|
32
32
|
end
|
@@ -83,7 +83,7 @@ module Charty
|
|
83
83
|
p.x_axis_label = context.xlabel if context.xlabel
|
84
84
|
p.y_axis_label = context.ylabel if context.ylabel
|
85
85
|
context.series.each do |data|
|
86
|
-
p.
|
86
|
+
p.dataxy(data.label, data.xs.to_a, data.ys.to_a)
|
87
87
|
end
|
88
88
|
p
|
89
89
|
when :scatter
|
@@ -99,7 +99,18 @@ module Charty
|
|
99
99
|
# refs. https://github.com/topfunky/gruff/issues/163
|
100
100
|
raise NotImplementedError
|
101
101
|
when :hist
|
102
|
-
|
102
|
+
p = plot::Histogram.new
|
103
|
+
p.title = context.title if context.title
|
104
|
+
p.x_axis_label = context.xlabel if context.xlabel
|
105
|
+
p.y_axis_label = context.ylabel if context.ylabel
|
106
|
+
if context.range_x
|
107
|
+
p.minimum_bin = context.range_x.first
|
108
|
+
p.maximum_bin = context.range_x.last
|
109
|
+
end
|
110
|
+
context.data.each do |data|
|
111
|
+
p.data('', data.to_a)
|
112
|
+
end
|
113
|
+
p
|
103
114
|
end
|
104
115
|
end
|
105
116
|
end
|
@@ -1,4 +1,10 @@
|
|
1
|
-
require
|
1
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+
require "json"
|
2
|
+
require "securerandom"
|
3
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+
require "tmpdir"
|
4
|
+
|
5
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+
require_relative "plotly_helpers/html_renderer"
|
6
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+
require_relative "plotly_helpers/notebook_renderer"
|
7
|
+
require_relative "plotly_helpers/plotly_renderer"
|
2
8
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|
3
9
|
module Charty
|
4
10
|
module Backends
|
@@ -35,7 +41,7 @@ module Charty
|
|
35
41
|
@series = series
|
36
42
|
end
|
37
43
|
|
38
|
-
def
|
44
|
+
def old_style_render(context, filename)
|
39
45
|
plot(nil, context)
|
40
46
|
end
|
41
47
|
|
@@ -117,32 +123,489 @@ module Charty
|
|
117
123
|
|
118
124
|
def begin_figure
|
119
125
|
@traces = []
|
120
|
-
@layout = {}
|
126
|
+
@layout = {showlegend: false}
|
121
127
|
end
|
122
128
|
|
123
|
-
def bar(bar_pos, values,
|
124
|
-
|
125
|
-
|
129
|
+
def bar(bar_pos, group_names, values, colors, orient, label: nil, width: 0.8r,
|
130
|
+
align: :center, conf_int: nil, error_colors: nil, error_width: nil, cap_size: nil)
|
131
|
+
bar_pos = Array(bar_pos)
|
132
|
+
values = Array(values)
|
133
|
+
colors = Array(colors).map(&:to_hex_string)
|
134
|
+
|
135
|
+
if orient == :v
|
136
|
+
x, y = bar_pos, values
|
137
|
+
x = group_names unless group_names.nil?
|
138
|
+
else
|
139
|
+
x, y = values, bar_pos
|
140
|
+
y = group_names unless group_names.nil?
|
141
|
+
end
|
142
|
+
|
143
|
+
trace = {
|
126
144
|
type: :bar,
|
127
|
-
|
128
|
-
|
129
|
-
|
145
|
+
orientation: orient,
|
146
|
+
x: x,
|
147
|
+
y: y,
|
148
|
+
width: width,
|
149
|
+
marker: {color: colors}
|
130
150
|
}
|
131
|
-
|
151
|
+
trace[:name] = label unless label.nil?
|
152
|
+
|
153
|
+
unless conf_int.nil?
|
154
|
+
errors_low = conf_int.map.with_index {|(low, _), i| values[i] - low }
|
155
|
+
errors_high = conf_int.map.with_index {|(_, high), i| high - values[i] }
|
156
|
+
|
157
|
+
error_bar = {
|
158
|
+
type: :data,
|
159
|
+
visible: true,
|
160
|
+
symmetric: false,
|
161
|
+
array: errors_high,
|
162
|
+
arrayminus: errors_low,
|
163
|
+
color: error_colors[0].to_hex_string
|
164
|
+
}
|
165
|
+
error_bar[:thickness] = error_width unless error_width.nil?
|
166
|
+
error_bar[:width] = cap_size unless cap_size.nil?
|
167
|
+
|
168
|
+
error_bar_key = orient == :v ? :error_y : :error_x
|
169
|
+
trace[error_bar_key] = error_bar
|
170
|
+
end
|
171
|
+
|
172
|
+
@traces << trace
|
173
|
+
|
174
|
+
if group_names
|
175
|
+
@layout[:barmode] = :group
|
176
|
+
end
|
177
|
+
end
|
178
|
+
|
179
|
+
def box_plot(plot_data, group_names,
|
180
|
+
orient:, colors:, gray:, dodge:, width: 0.8r,
|
181
|
+
flier_size: 5, whisker: 1.5, notch: false)
|
182
|
+
colors = Array(colors).map(&:to_hex_string)
|
183
|
+
gray = gray.to_hex_string
|
184
|
+
width = Float(width)
|
185
|
+
flier_size = Float(width)
|
186
|
+
whisker = Float(whisker)
|
187
|
+
|
188
|
+
traces = plot_data.map.with_index do |group_data, i|
|
189
|
+
group_data = Array(group_data)
|
190
|
+
trace = {
|
191
|
+
type: :box,
|
192
|
+
orientation: orient,
|
193
|
+
name: group_names[i],
|
194
|
+
marker: {color: colors[i]}
|
195
|
+
}
|
196
|
+
if orient == :v
|
197
|
+
trace.update(y: group_data)
|
198
|
+
else
|
199
|
+
trace.update(x: group_data)
|
200
|
+
end
|
201
|
+
|
202
|
+
trace
|
203
|
+
end
|
204
|
+
|
205
|
+
traces.reverse! if orient == :h
|
206
|
+
|
207
|
+
@traces.concat(traces)
|
208
|
+
end
|
209
|
+
|
210
|
+
def grouped_box_plot(plot_data, group_names, color_names,
|
211
|
+
orient:, colors:, gray:, dodge:, width: 0.8r,
|
212
|
+
flier_size: 5, whisker: 1.5, notch: false)
|
213
|
+
colors = Array(colors).map(&:to_hex_string)
|
214
|
+
gray = gray.to_hex_string
|
215
|
+
width = Float(width)
|
216
|
+
flier_size = Float(width)
|
217
|
+
whisker = Float(whisker)
|
218
|
+
|
219
|
+
@layout[:boxmode] = :group
|
220
|
+
|
221
|
+
if orient == :h
|
222
|
+
@layout[:xaxis] ||= {}
|
223
|
+
@layout[:xaxis][:zeroline] = false
|
224
|
+
|
225
|
+
plot_data = plot_data.map {|d| d.reverse }
|
226
|
+
group_names = group_names.reverse
|
227
|
+
end
|
228
|
+
|
229
|
+
traces = color_names.map.with_index do |color_name, i|
|
230
|
+
group_keys = group_names.flat_map.with_index { |name, j|
|
231
|
+
Array.new(plot_data[i][j].length, name)
|
232
|
+
}.flatten
|
233
|
+
|
234
|
+
values = plot_data[i].flat_map {|d| Array(d) }
|
235
|
+
|
236
|
+
trace = {
|
237
|
+
type: :box,
|
238
|
+
orientation: orient,
|
239
|
+
name: color_name,
|
240
|
+
marker: {color: colors[i]}
|
241
|
+
}
|
242
|
+
|
243
|
+
if orient == :v
|
244
|
+
trace.update(y: values, x: group_keys)
|
245
|
+
else
|
246
|
+
trace.update(x: values, y: group_keys)
|
247
|
+
end
|
248
|
+
|
249
|
+
trace
|
250
|
+
end
|
251
|
+
|
252
|
+
@traces.concat(traces)
|
253
|
+
end
|
254
|
+
|
255
|
+
def scatter(x, y, variables, color:, color_mapper:,
|
256
|
+
style:, style_mapper:, size:, size_mapper:)
|
257
|
+
orig_x, orig_y = x, y
|
258
|
+
|
259
|
+
x = case x
|
260
|
+
when Charty::Vector
|
261
|
+
x.to_a
|
262
|
+
else
|
263
|
+
Array.try_convert(x)
|
264
|
+
end
|
265
|
+
if x.nil?
|
266
|
+
raise ArgumentError, "Invalid value for x: %p" % orig_x
|
267
|
+
end
|
268
|
+
|
269
|
+
y = case y
|
270
|
+
when Charty::Vector
|
271
|
+
y.to_a
|
272
|
+
else
|
273
|
+
Array.try_convert(y)
|
274
|
+
end
|
275
|
+
if y.nil?
|
276
|
+
raise ArgumentError, "Invalid value for y: %p" % orig_y
|
277
|
+
end
|
278
|
+
|
279
|
+
unless color.nil? && style.nil?
|
280
|
+
grouped_scatter(x, y, variables,
|
281
|
+
color: color, color_mapper: color_mapper,
|
282
|
+
style: style, style_mapper: style_mapper,
|
283
|
+
size: size, size_mapper: size_mapper)
|
284
|
+
return
|
285
|
+
end
|
286
|
+
|
287
|
+
trace = {
|
288
|
+
type: :scatter,
|
289
|
+
mode: :markers,
|
290
|
+
x: x,
|
291
|
+
y: y,
|
292
|
+
marker: {
|
293
|
+
line: {
|
294
|
+
width: 1,
|
295
|
+
color: "#fff"
|
296
|
+
},
|
297
|
+
size: 10
|
298
|
+
}
|
299
|
+
}
|
300
|
+
|
301
|
+
unless size.nil?
|
302
|
+
trace[:marker][:size] = size_mapper[size].map {|x| 6.0 + x * 6.0 }
|
303
|
+
end
|
304
|
+
|
305
|
+
@traces << trace
|
306
|
+
end
|
307
|
+
|
308
|
+
private def grouped_scatter(x, y, variables, color:, color_mapper:,
|
309
|
+
style:, style_mapper:, size:, size_mapper:)
|
310
|
+
@layout[:showlegend] = true
|
311
|
+
|
312
|
+
groups = (0 ... x.length).group_by do |i|
|
313
|
+
key = {}
|
314
|
+
key[:color] = color[i] unless color.nil?
|
315
|
+
key[:style] = style[i] unless style.nil?
|
316
|
+
key
|
317
|
+
end
|
318
|
+
|
319
|
+
groups.each do |group_key, indices|
|
320
|
+
trace = {
|
321
|
+
type: :scatter,
|
322
|
+
mode: :markers,
|
323
|
+
x: x.values_at(*indices),
|
324
|
+
y: y.values_at(*indices),
|
325
|
+
marker: {
|
326
|
+
line: {
|
327
|
+
width: 1,
|
328
|
+
color: "#fff"
|
329
|
+
},
|
330
|
+
size: 10
|
331
|
+
}
|
332
|
+
}
|
333
|
+
|
334
|
+
unless size.nil?
|
335
|
+
vals = size.values_at(*indices)
|
336
|
+
trace[:marker][:size] = size_mapper[vals].map do |x|
|
337
|
+
scale_scatter_point_size(x).to_f
|
338
|
+
end
|
339
|
+
end
|
340
|
+
|
341
|
+
name = []
|
342
|
+
legend_title = []
|
343
|
+
|
344
|
+
if group_key.key?(:color)
|
345
|
+
trace[:marker][:color] = color_mapper[group_key[:color]].to_hex_string
|
346
|
+
name << group_key[:color]
|
347
|
+
legend_title << variables[:color]
|
348
|
+
end
|
349
|
+
|
350
|
+
if group_key.key?(:style)
|
351
|
+
trace[:marker][:symbol] = style_mapper[group_key[:style], :marker]
|
352
|
+
name << group_key[:style]
|
353
|
+
legend_title << variables[:style]
|
354
|
+
end
|
355
|
+
|
356
|
+
trace[:name] = name.uniq.join(", ") unless name.empty?
|
357
|
+
|
358
|
+
@traces << trace
|
359
|
+
|
360
|
+
unless legend_title.empty?
|
361
|
+
@layout[:legend] ||= {}
|
362
|
+
@layout[:legend][:title] = {text: legend_title.uniq.join(", ")}
|
363
|
+
end
|
364
|
+
end
|
132
365
|
end
|
133
366
|
|
134
|
-
def
|
135
|
-
|
136
|
-
|
137
|
-
|
138
|
-
|
139
|
-
|
140
|
-
|
141
|
-
|
142
|
-
|
143
|
-
|
367
|
+
def add_scatter_plot_legend(variables, color_mapper, size_mapper, style_mapper, legend)
|
368
|
+
if legend == :full
|
369
|
+
warn("Plotly backend does not support full verbosity legend")
|
370
|
+
end
|
371
|
+
end
|
372
|
+
|
373
|
+
private def scale_scatter_point_size(x)
|
374
|
+
min = 6
|
375
|
+
max = 12
|
376
|
+
|
377
|
+
min + x * (max - min)
|
378
|
+
end
|
379
|
+
|
380
|
+
def line(x, y, variables, color:, color_mapper:, size:, size_mapper:, style:, style_mapper:, ci_params:)
|
381
|
+
x = case x
|
382
|
+
when Charty::Vector
|
383
|
+
x.to_a
|
384
|
+
else
|
385
|
+
orig_x, x = x, Array.try_convert(x)
|
386
|
+
if x.nil?
|
387
|
+
raise ArgumentError, "Invalid value for x: %p" % orig_x
|
388
|
+
end
|
389
|
+
end
|
390
|
+
|
391
|
+
y = case y
|
392
|
+
when Charty::Vector
|
393
|
+
y.to_a
|
394
|
+
else
|
395
|
+
orig_y, y = y, Array.try_convert(y)
|
396
|
+
if y.nil?
|
397
|
+
raise ArgumentError, "Invalid value for y: %p" % orig_y
|
398
|
+
end
|
399
|
+
end
|
400
|
+
|
401
|
+
name = []
|
402
|
+
legend_title = []
|
403
|
+
|
404
|
+
if color.nil?
|
405
|
+
# TODO: do not hard code this
|
406
|
+
line_color = Colors["#1f77b4"] # the first color of D3's category10 palette
|
407
|
+
else
|
408
|
+
line_color = color_mapper[color].to_rgb
|
409
|
+
name << color
|
410
|
+
legend_title << variables[:color]
|
411
|
+
end
|
412
|
+
|
413
|
+
unless style.nil?
|
414
|
+
marker, dashes = style_mapper[style].values_at(:marker, :dashes)
|
415
|
+
name << style
|
416
|
+
legend_title << variables[:style]
|
417
|
+
end
|
418
|
+
|
419
|
+
trace = {
|
420
|
+
type: :scatter,
|
421
|
+
mode: marker.nil? ? "lines" : "lines+markers",
|
422
|
+
x: x,
|
423
|
+
y: y,
|
424
|
+
line: {
|
425
|
+
shape: :linear,
|
426
|
+
color: line_color.to_hex_string
|
427
|
+
}
|
428
|
+
}
|
429
|
+
|
430
|
+
default_line_width = 2.0
|
431
|
+
unless size.nil?
|
432
|
+
line_width = default_line_width + 2.0 * size_mapper[size]
|
433
|
+
trace[:line][:width] = line_width
|
434
|
+
end
|
435
|
+
|
436
|
+
unless dashes.nil?
|
437
|
+
trace[:line][:dash] = convert_dash_pattern(dashes, line_width || default_line_width)
|
438
|
+
end
|
439
|
+
|
440
|
+
unless marker.nil?
|
441
|
+
trace[:marker] = {
|
442
|
+
line: {
|
443
|
+
width: 1,
|
444
|
+
color: "#fff"
|
445
|
+
},
|
446
|
+
symbol: marker,
|
447
|
+
size: 10
|
448
|
+
}
|
449
|
+
end
|
450
|
+
|
451
|
+
unless ci_params.nil?
|
452
|
+
case ci_params[:style]
|
453
|
+
when :band
|
454
|
+
y_min = ci_params[:y_min].to_a
|
455
|
+
y_max = ci_params[:y_max].to_a
|
456
|
+
@traces << {
|
457
|
+
type: :scatter,
|
458
|
+
x: x,
|
459
|
+
y: y_max,
|
460
|
+
mode: :lines,
|
461
|
+
line: { shape: :linear, width: 0 },
|
462
|
+
showlegend: false
|
463
|
+
}
|
464
|
+
@traces << {
|
465
|
+
type: :scatter,
|
466
|
+
x: x,
|
467
|
+
y: y_min,
|
468
|
+
mode: :lines,
|
469
|
+
line: { shape: :linear, width: 0 },
|
470
|
+
fill: :tonexty,
|
471
|
+
fillcolor: line_color.to_rgba(alpha: 0.2).to_hex_string,
|
472
|
+
showlegend: false
|
473
|
+
}
|
474
|
+
when :bars
|
475
|
+
y_min = ci_params[:y_min].map.with_index {|v, i| y[i] - v }
|
476
|
+
y_max = ci_params[:y_max].map.with_index {|v, i| v - y[i] }
|
477
|
+
trace[:error_y] = {
|
478
|
+
visible: true,
|
479
|
+
type: :data,
|
480
|
+
array: y_max,
|
481
|
+
arrayminus: y_min
|
482
|
+
}
|
483
|
+
unless line_color.nil?
|
484
|
+
trace[:error_y][:color] = line_color
|
485
|
+
end
|
486
|
+
unless line_width.nil?
|
487
|
+
trace[:error_y][:thickness] = line_width
|
488
|
+
end
|
489
|
+
end
|
490
|
+
end
|
491
|
+
|
492
|
+
trace[:name] = name.uniq.join(", ") unless name.empty?
|
493
|
+
|
494
|
+
@traces << trace
|
495
|
+
|
496
|
+
unless legend_title.empty?
|
497
|
+
@layout[:showlegend] = true
|
498
|
+
@layout[:legend] ||= {}
|
499
|
+
@layout[:legend][:title] = {text: legend_title.uniq.join(", ")}
|
500
|
+
end
|
501
|
+
end
|
502
|
+
|
503
|
+
def add_line_plot_legend(variables, color_mapper, size_mapper, style_mapper, legend)
|
504
|
+
if legend == :full
|
505
|
+
warn("Plotly backend does not support full verbosity legend")
|
506
|
+
end
|
507
|
+
|
508
|
+
legend_order = if variables.key?(:color)
|
509
|
+
if variables.key?(:style)
|
510
|
+
# both color and style
|
511
|
+
color_mapper.levels.product(style_mapper.levels)
|
512
|
+
else
|
513
|
+
# only color
|
514
|
+
color_mapper.levels
|
515
|
+
end
|
516
|
+
elsif variables.key?(:style)
|
517
|
+
# only style
|
518
|
+
style_mapper.levels
|
519
|
+
else
|
520
|
+
# no legend entries
|
521
|
+
nil
|
522
|
+
end
|
523
|
+
|
524
|
+
if legend_order
|
525
|
+
# sort traces
|
526
|
+
legend_index = legend_order.map.with_index { |name, i|
|
527
|
+
[Array(name).uniq.join(", "), i]
|
528
|
+
}.to_h
|
529
|
+
@traces = @traces.each_with_index.sort_by { |trace, trace_index|
|
530
|
+
index = legend_index.fetch(trace[:name], legend_order.length)
|
531
|
+
[index, trace_index]
|
532
|
+
}.map(&:first)
|
533
|
+
|
534
|
+
# remove duplicated legend entries
|
535
|
+
names = {}
|
536
|
+
@traces.each do |trace|
|
537
|
+
if trace[:showlegend] != false
|
538
|
+
name = trace[:name]
|
539
|
+
if name
|
540
|
+
if names.key?(name)
|
541
|
+
# Hide duplications
|
542
|
+
trace[:showlegend] = false
|
543
|
+
else
|
544
|
+
trace[:showlegend] = true
|
545
|
+
names[name] = true
|
546
|
+
end
|
547
|
+
else
|
548
|
+
# Hide no name trace in legend
|
549
|
+
trace[:showlegend] = false
|
550
|
+
end
|
551
|
+
end
|
552
|
+
end
|
553
|
+
end
|
554
|
+
end
|
555
|
+
|
556
|
+
private def convert_dash_pattern(pattern, line_width)
|
557
|
+
case pattern
|
558
|
+
when ""
|
559
|
+
:solid
|
560
|
+
else
|
561
|
+
pattern.map {|d| "#{line_width * d}px" }.join(",")
|
562
|
+
end
|
563
|
+
end
|
564
|
+
|
565
|
+
PLOTLY_HISTNORM = {
|
566
|
+
count: "".freeze,
|
567
|
+
frequency: "density".freeze,
|
568
|
+
density: "probability density".freeze,
|
569
|
+
probability: "probability".freeze
|
570
|
+
}.freeze
|
571
|
+
|
572
|
+
def univariate_histogram(data, name, variable_name, stat,
|
573
|
+
bin_start, bin_end, bin_size, alpha,
|
574
|
+
color, color_mapper)
|
575
|
+
orientation = case variable_name
|
576
|
+
when :x
|
577
|
+
:v
|
578
|
+
else
|
579
|
+
:h
|
580
|
+
end
|
581
|
+
trace = {
|
582
|
+
type: "histogram",
|
583
|
+
name: name.to_s,
|
584
|
+
variable_name => data.to_a,
|
585
|
+
orientation: orientation,
|
586
|
+
histnorm: PLOTLY_HISTNORM[stat],
|
587
|
+
"#{variable_name}bins": {
|
588
|
+
start: bin_start,
|
589
|
+
end: bin_end,
|
590
|
+
size: bin_size
|
591
|
+
},
|
592
|
+
opacity: alpha
|
593
|
+
}
|
594
|
+
|
595
|
+
if color
|
596
|
+
trace[:marker] = {
|
597
|
+
color: color_mapper[color].to_rgb.to_hex_string
|
598
|
+
}
|
599
|
+
end
|
600
|
+
|
601
|
+
@traces << trace
|
602
|
+
|
603
|
+
@layout[:bargap] = 0.05
|
604
|
+
|
605
|
+
if @traces.length > 1
|
606
|
+
@layout[:barmode] = "overlay"
|
607
|
+
@layout[:showlegend] = true
|
144
608
|
end
|
145
|
-
@layout[:showlegend] = false
|
146
609
|
end
|
147
610
|
|
148
611
|
def set_xlabel(label)
|
@@ -161,45 +624,226 @@ module Charty
|
|
161
624
|
@layout[:xaxis][:tickvals] = values
|
162
625
|
end
|
163
626
|
|
627
|
+
def set_yticks(values)
|
628
|
+
@layout[:yaxis] ||= {}
|
629
|
+
@layout[:yaxis][:tickmode] = "array"
|
630
|
+
@layout[:yaxis][:tickvals] = values
|
631
|
+
end
|
632
|
+
|
164
633
|
def set_xtick_labels(labels)
|
165
634
|
@layout[:xaxis] ||= {}
|
166
635
|
@layout[:xaxis][:tickmode] = "array"
|
167
636
|
@layout[:xaxis][:ticktext] = labels
|
168
637
|
end
|
169
638
|
|
639
|
+
def set_ytick_labels(labels)
|
640
|
+
@layout[:yaxis] ||= {}
|
641
|
+
@layout[:yaxis][:tickmode] = "array"
|
642
|
+
@layout[:yaxis][:ticktext] = labels
|
643
|
+
end
|
644
|
+
|
170
645
|
def set_xlim(min, max)
|
171
646
|
@layout[:xaxis] ||= {}
|
172
647
|
@layout[:xaxis][:range] = [min, max]
|
173
648
|
end
|
174
649
|
|
650
|
+
def set_ylim(min, max)
|
651
|
+
@layout[:yaxis] ||= {}
|
652
|
+
@layout[:yaxis][:range] = [min, max]
|
653
|
+
end
|
654
|
+
|
175
655
|
def disable_xaxis_grid
|
176
656
|
# do nothing
|
177
657
|
end
|
178
658
|
|
179
|
-
def
|
180
|
-
|
181
|
-
|
182
|
-
|
659
|
+
def disable_yaxis_grid
|
660
|
+
# do nothing
|
661
|
+
end
|
662
|
+
|
663
|
+
def invert_yaxis
|
664
|
+
@traces.each do |trace|
|
665
|
+
case trace[:type]
|
666
|
+
when :bar
|
667
|
+
trace[:y].reverse!
|
668
|
+
end
|
183
669
|
end
|
184
670
|
|
185
|
-
|
671
|
+
if @layout[:boxmode] == :group
|
672
|
+
@traces.reverse!
|
673
|
+
end
|
674
|
+
|
675
|
+
if @layout[:yaxis] && @layout[:yaxis][:ticktext]
|
676
|
+
@layout[:yaxis][:ticktext].reverse!
|
677
|
+
end
|
678
|
+
end
|
679
|
+
|
680
|
+
def legend(loc:, title:)
|
681
|
+
@layout[:showlegend] = true
|
682
|
+
@layout[:legend] = {
|
683
|
+
title: {
|
684
|
+
text: title
|
685
|
+
}
|
686
|
+
}
|
687
|
+
# TODO: Handle loc
|
688
|
+
end
|
689
|
+
|
690
|
+
def save(filename, format: nil, title: nil, width: 700, height: 500, **kwargs)
|
691
|
+
format = detect_format(filename) if format.nil?
|
692
|
+
|
693
|
+
case format
|
694
|
+
when nil, :html, "text/html"
|
695
|
+
save_html(filename, title: title, **kwargs)
|
696
|
+
when :png, "png", "image/png",
|
697
|
+
:jpeg, "jpeg", "image/jpeg"
|
698
|
+
render_image(format, filename: filename, notebook: false, title: title, width: width, height: height, **kwargs)
|
699
|
+
end
|
700
|
+
nil
|
701
|
+
end
|
186
702
|
|
703
|
+
private def detect_format(filename)
|
704
|
+
case File.extname(filename).downcase
|
705
|
+
when ".htm", ".html"
|
706
|
+
:html
|
707
|
+
when ".png"
|
708
|
+
:png
|
709
|
+
when ".jpg", ".jpeg"
|
710
|
+
:jpeg
|
711
|
+
else
|
712
|
+
raise ArgumentError,
|
713
|
+
"Unable to infer file type from filename: %p" % filename
|
714
|
+
end
|
715
|
+
end
|
716
|
+
|
717
|
+
private def save_html(filename, title:, element_id: nil)
|
187
718
|
html = <<~HTML
|
719
|
+
<!DOCTYPE html>
|
720
|
+
<html>
|
721
|
+
<head>
|
722
|
+
<meta charset="utf-8">
|
723
|
+
<title>%{title}</title>
|
724
|
+
<script src="https://cdn.plot.ly/plotly-latest.min.js"></script>
|
725
|
+
</head>
|
726
|
+
<body>
|
188
727
|
<div id="%{id}" style="width: 100%%; height:100%%;"></div>
|
189
728
|
<script type="text/javascript">
|
190
|
-
|
191
|
-
Plotly.newPlot("%{id}", %{data}, %{layout});
|
192
|
-
});
|
729
|
+
Plotly.newPlot("%{id}", %{data}, %{layout});
|
193
730
|
</script>
|
731
|
+
</body>
|
732
|
+
</html>
|
194
733
|
HTML
|
195
734
|
|
735
|
+
element_id = SecureRandom.uuid if element_id.nil?
|
736
|
+
|
196
737
|
html %= {
|
197
|
-
|
738
|
+
title: title || default_html_title,
|
739
|
+
id: element_id,
|
198
740
|
data: JSON.dump(@traces),
|
199
741
|
layout: JSON.dump(@layout)
|
200
742
|
}
|
201
|
-
|
202
|
-
|
743
|
+
File.write(filename, html)
|
744
|
+
end
|
745
|
+
|
746
|
+
private def default_html_title
|
747
|
+
"Charty plot"
|
748
|
+
end
|
749
|
+
|
750
|
+
def render(element_id: nil, format: nil, notebook: false)
|
751
|
+
case format
|
752
|
+
when :html, "html", nil
|
753
|
+
format = "text/html"
|
754
|
+
when :png, "png"
|
755
|
+
format = "image/png"
|
756
|
+
when :jpeg, "jpeg"
|
757
|
+
format = "image/jpeg"
|
758
|
+
end
|
759
|
+
|
760
|
+
case format
|
761
|
+
when "text/html"
|
762
|
+
# render html after this case cause
|
763
|
+
when "image/png", "image/jpeg"
|
764
|
+
image_data = render_image(format, element_id: element_id, notebook: false)
|
765
|
+
if notebook
|
766
|
+
return [format, image_data]
|
767
|
+
else
|
768
|
+
return image_data
|
769
|
+
end
|
770
|
+
else
|
771
|
+
raise ArgumentError,
|
772
|
+
"Unsupported mime type to render: %p" % format
|
773
|
+
end
|
774
|
+
|
775
|
+
element_id = SecureRandom.uuid if element_id.nil?
|
776
|
+
|
777
|
+
renderer = PlotlyHelpers::HtmlRenderer.new(full_html: !notebook)
|
778
|
+
html = renderer.render({data: @traces, layout: @layout}, element_id: element_id)
|
779
|
+
if notebook
|
780
|
+
[format, html]
|
781
|
+
else
|
782
|
+
html
|
783
|
+
end
|
784
|
+
end
|
785
|
+
|
786
|
+
def render_mimebundle(include: [], exclude: [])
|
787
|
+
types = case
|
788
|
+
when IRubyHelper.vscode?,
|
789
|
+
IRubyHelper.nteract?
|
790
|
+
[:plotly_mimetype]
|
791
|
+
else
|
792
|
+
[:plotly_mimetype, :notebook]
|
793
|
+
end
|
794
|
+
bundle = Util.filter_map(types) { |type|
|
795
|
+
case type
|
796
|
+
when :plotly_mimetype
|
797
|
+
render_plotly_mimetype_bundle
|
798
|
+
when :notebook
|
799
|
+
render_notebook_bundle
|
800
|
+
end
|
801
|
+
}.to_h
|
802
|
+
bundle
|
803
|
+
end
|
804
|
+
|
805
|
+
private def render_plotly_mimetype_bundle
|
806
|
+
renderer = PlotlyHelpers::PlotlyRenderer.new
|
807
|
+
obj = renderer.render({data: @traces, layout: @layout})
|
808
|
+
[ "application/vnd.plotly.v1+json", obj ]
|
809
|
+
end
|
810
|
+
|
811
|
+
private def render_notebook_bundle
|
812
|
+
renderer = self.class.notebook_renderer
|
813
|
+
renderer.activate
|
814
|
+
html = renderer.render({data: @traces, layout: @layout})
|
815
|
+
[ "text/html", html ]
|
816
|
+
end
|
817
|
+
|
818
|
+
# for new APIs
|
819
|
+
def self.notebook_renderer
|
820
|
+
@notebook_renderer ||= PlotlyHelpers::NotebookRenderer.new
|
821
|
+
end
|
822
|
+
|
823
|
+
private def render_image(format=nil, filename: nil, element_id: nil, notebook: false,
|
824
|
+
title: nil, width: nil, height: nil)
|
825
|
+
format = "image/png" if format.nil?
|
826
|
+
case format
|
827
|
+
when :png, "png", :jpeg, "jpeg"
|
828
|
+
image_type = format.to_s
|
829
|
+
when "image/png", "image/jpeg"
|
830
|
+
image_type = format.split("/").last
|
831
|
+
else
|
832
|
+
raise ArgumentError,
|
833
|
+
"Unsupported mime type to render image: %p" % format
|
834
|
+
end
|
835
|
+
|
836
|
+
height = 525 if height.nil?
|
837
|
+
width = (height * Math.sqrt(2)).to_i if width.nil?
|
838
|
+
title = "Charty plot" if title.nil?
|
839
|
+
|
840
|
+
element_id = SecureRandom.uuid if element_id.nil?
|
841
|
+
element_id = "charty-plotly-#{element_id}"
|
842
|
+
Dir.mktmpdir do |tmpdir|
|
843
|
+
html_filename = File.join(tmpdir, "%s.html" % element_id)
|
844
|
+
save_html(html_filename, title: title, element_id: element_id)
|
845
|
+
return self.class.render_image(html_filename, filename, image_type, element_id, width, height)
|
846
|
+
end
|
203
847
|
end
|
204
848
|
|
205
849
|
module IRubyOutput
|
@@ -242,6 +886,61 @@ module Charty
|
|
242
886
|
END
|
243
887
|
end
|
244
888
|
end
|
889
|
+
|
890
|
+
@playwright_fiber = nil
|
891
|
+
|
892
|
+
def self.ensure_playwright
|
893
|
+
if @playwright_fiber.nil?
|
894
|
+
begin
|
895
|
+
require "playwright"
|
896
|
+
rescue LoadError
|
897
|
+
$stderr.puts "ERROR: You need to install playwright and playwright-ruby-client before using Plotly renderer"
|
898
|
+
raise
|
899
|
+
end
|
900
|
+
|
901
|
+
@playwright_fiber = Fiber.new do
|
902
|
+
playwright_cli_executable_path = ENV.fetch("PLAYWRIGHT_CLI_EXECUTABLE_PATH", "npx playwright")
|
903
|
+
Playwright.create(playwright_cli_executable_path: playwright_cli_executable_path) do |playwright|
|
904
|
+
playwright.chromium.launch(headless: true) do |browser|
|
905
|
+
request = Fiber.yield
|
906
|
+
loop do
|
907
|
+
result = nil
|
908
|
+
case request.shift
|
909
|
+
when :finish
|
910
|
+
break
|
911
|
+
when :render
|
912
|
+
input, output, format, element_id, width, height = request
|
913
|
+
|
914
|
+
page = browser.new_page
|
915
|
+
page.set_viewport_size(width: width, height: height)
|
916
|
+
page.goto("file://#{input}")
|
917
|
+
element = page.query_selector("\##{element_id}")
|
918
|
+
|
919
|
+
kwargs = {type: format}
|
920
|
+
kwargs[:path] = output unless output.nil?
|
921
|
+
result = element.screenshot(**kwargs)
|
922
|
+
end
|
923
|
+
request = Fiber.yield(result)
|
924
|
+
end
|
925
|
+
end
|
926
|
+
end
|
927
|
+
end
|
928
|
+
@playwright_fiber.resume
|
929
|
+
end
|
930
|
+
end
|
931
|
+
|
932
|
+
def self.terminate_playwright
|
933
|
+
return if @playwright_fiber.nil?
|
934
|
+
|
935
|
+
@playwright_fiber.resume([:finish])
|
936
|
+
end
|
937
|
+
|
938
|
+
at_exit { terminate_playwright }
|
939
|
+
|
940
|
+
def self.render_image(input, output, format, element_id, width, height)
|
941
|
+
ensure_playwright if @playwright_fiber.nil?
|
942
|
+
@playwright_fiber.resume([:render, input, output, format.to_s, element_id, width, height])
|
943
|
+
end
|
245
944
|
end
|
246
945
|
end
|
247
946
|
end
|