carray 2.0.0 → 3.0.0

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Files changed (339) hide show
  1. checksums.yaml +4 -4
  2. data/.yardopts +5 -25
  3. data/CHANGELOG.md +16 -0
  4. data/LICENSE +1 -1
  5. data/NEWS.md +3 -0
  6. data/README.md +128 -44
  7. data/carray.gemspec +22 -24
  8. data/ext/ca_array_pool.c +91 -0
  9. data/ext/ca_axis_descriptor.h +186 -0
  10. data/ext/ca_axis_dispatch.c +924 -0
  11. data/ext/ca_axis_group.c +1208 -0
  12. data/ext/ca_bincmp_dispatch.c +76 -0
  13. data/ext/ca_bincmp_dispatch.h +85 -0
  14. data/ext/ca_binop_dispatch.c +125 -0
  15. data/ext/ca_binop_dispatch.h +159 -0
  16. data/ext/ca_categorical_iterator.c +1375 -0
  17. data/ext/ca_compare.c +94 -0
  18. data/ext/ca_compare.h +26 -0
  19. data/ext/ca_composite_dispatch.c +414 -0
  20. data/ext/ca_composite_dispatch.h +116 -0
  21. data/ext/ca_for_buffer.h +96 -0
  22. data/ext/ca_for_each_element.h +241 -0
  23. data/ext/ca_group_iter.c +304 -0
  24. data/ext/ca_iter_substrate.h +325 -0
  25. data/ext/ca_kernel_iterator.c +4321 -0
  26. data/ext/ca_kernel_iterator.h +2603 -0
  27. data/ext/ca_moncmp_dispatch.c +37 -0
  28. data/ext/ca_moncmp_dispatch.h +62 -0
  29. data/ext/ca_monop_dispatch.c +200 -0
  30. data/ext/ca_monop_dispatch.h +235 -0
  31. data/ext/ca_obj_array.c +355 -359
  32. data/ext/ca_obj_bincmp.c +809 -0
  33. data/ext/ca_obj_binop.c +892 -0
  34. data/ext/ca_obj_bitarray.c +369 -164
  35. data/ext/ca_obj_bitfield.c +294 -234
  36. data/ext/ca_obj_block.c +189 -711
  37. data/ext/ca_obj_byte_swap.c +766 -0
  38. data/ext/ca_obj_const_string.c +965 -0
  39. data/ext/ca_obj_face.c +670 -0
  40. data/ext/ca_obj_face.h +247 -0
  41. data/ext/ca_obj_fake.c +228 -100
  42. data/ext/ca_obj_farray.c +54 -441
  43. data/ext/ca_obj_field.c +82 -529
  44. data/ext/ca_obj_fixlen_string.c +306 -0
  45. data/ext/ca_obj_grid.c +858 -440
  46. data/ext/ca_obj_meld.c +1034 -0
  47. data/ext/ca_obj_moncmp.c +569 -0
  48. data/ext/ca_obj_monop.c +1111 -0
  49. data/ext/ca_obj_object.c +774 -298
  50. data/ext/ca_obj_record.c +468 -0
  51. data/ext/ca_obj_reduce.c +97 -82
  52. data/ext/ca_obj_refer.c +569 -459
  53. data/ext/ca_obj_remap.c +475 -0
  54. data/ext/ca_obj_repeat.c +92 -477
  55. data/ext/ca_obj_roll.c +616 -0
  56. data/ext/ca_obj_select.c +344 -296
  57. data/ext/ca_obj_select_axis.c +1296 -0
  58. data/ext/ca_obj_shift.c +230 -792
  59. data/ext/ca_obj_source.c +78 -0
  60. data/ext/ca_obj_stack.c +1173 -0
  61. data/ext/ca_obj_stride.c +2501 -0
  62. data/ext/ca_obj_string.c +268 -0
  63. data/ext/ca_obj_tile.c +614 -0
  64. data/ext/ca_obj_time.c +546 -0
  65. data/ext/ca_obj_timedelta.c +435 -0
  66. data/ext/ca_obj_transpose.c +62 -516
  67. data/ext/ca_obj_triop.c +746 -0
  68. data/ext/ca_obj_unbound_repeat.c +208 -241
  69. data/ext/ca_obj_window.c +1131 -563
  70. data/ext/ca_op_byte_swap.c +175 -0
  71. data/ext/ca_op_ipower.c +319 -0
  72. data/ext/ca_op_powi.h +88 -0
  73. data/ext/ca_sort_kernels.h +132 -0
  74. data/ext/ca_sweep_engine.c +430 -0
  75. data/ext/ca_sweep_engine.h +157 -0
  76. data/ext/ca_transform_common.c +228 -0
  77. data/ext/ca_triop_dispatch.c +55 -0
  78. data/ext/ca_triop_dispatch.h +62 -0
  79. data/ext/carray.h +795 -402
  80. data/ext/carray_access.c +831 -711
  81. data/ext/carray_attribute.c +98 -330
  82. data/ext/carray_bincount.c +255 -0
  83. data/ext/carray_broadcast.c +283 -0
  84. data/ext/carray_call_cfunc.c +1360 -828
  85. data/ext/carray_call_cfunc.h +160 -0
  86. data/ext/carray_cast.c +1212 -301
  87. data/ext/carray_cast_func.rb +81 -40
  88. data/ext/carray_class.c +53 -63
  89. data/ext/carray_config.h +28 -0
  90. data/ext/carray_conversion.c +350 -346
  91. data/ext/carray_copy.c +156 -268
  92. data/ext/carray_core.c +1342 -199
  93. data/ext/carray_count.c +312 -0
  94. data/ext/carray_data_type.c +43 -19
  95. data/ext/carray_element.c +585 -213
  96. data/ext/carray_factorize.c +2542 -0
  97. data/ext/carray_generate.c +230 -559
  98. data/ext/carray_histogram.c +490 -0
  99. data/ext/carray_hold.c +228 -0
  100. data/ext/carray_index_classifier.c +1035 -0
  101. data/ext/carray_index_classifier.h +27 -0
  102. data/ext/carray_internal.h +120 -0
  103. data/ext/carray_kernels_bincmp.c +4445 -0
  104. data/ext/carray_kernels_binop.c +10979 -0
  105. data/ext/carray_kernels_init.c +36 -0
  106. data/ext/carray_kernels_map.c +3466 -0
  107. data/ext/carray_kernels_moncmp.c +2096 -0
  108. data/ext/carray_kernels_monop.c +18312 -0
  109. data/ext/carray_kernels_reduce_aggregate.c +25836 -0
  110. data/ext/carray_kernels_reduce_boolean.c +329 -0
  111. data/ext/carray_kernels_reduce_cumulative.c +14592 -0
  112. data/ext/carray_kernels_reduce_extreme.c +16947 -0
  113. data/ext/carray_kernels_reduce_variance.c +3909 -0
  114. data/ext/carray_kernels_scan.c +3692 -0
  115. data/ext/carray_kernels_search.c +32137 -0
  116. data/ext/carray_kernels_sort.c +10625 -0
  117. data/ext/carray_kernels_triop.c +1391 -0
  118. data/ext/carray_lazy.c +567 -0
  119. data/ext/carray_loop.c +88 -200
  120. data/ext/carray_mask.c +848 -154
  121. data/ext/carray_math_kernel.h +120 -0
  122. data/ext/carray_mathfunc.c +10 -241
  123. data/ext/carray_median_percentile.c +1257 -0
  124. data/ext/carray_memory_view.c +1625 -0
  125. data/ext/carray_operator.c +1526 -318
  126. data/ext/carray_order.c +664 -1394
  127. data/ext/carray_partition.c +416 -0
  128. data/ext/carray_random.c +518 -0
  129. data/ext/carray_scatter.c +357 -0
  130. data/ext/carray_slab.c +1219 -0
  131. data/ext/carray_slab.h +84 -0
  132. data/ext/carray_sort.c +829 -0
  133. data/ext/carray_sort_kernel.c +620 -0
  134. data/ext/carray_struct.c +695 -0
  135. data/ext/carray_test.c +343 -229
  136. data/ext/carray_undef.c +34 -17
  137. data/ext/carray_utils.c +175 -74
  138. data/ext/extconf.rb +216 -55
  139. data/ext/mk_call_cfunc.rb +480 -0
  140. data/ext/mkkernel.rb +8842 -0
  141. data/ext/ruby_carray.c +202 -101
  142. data/ext/version.h +4 -14
  143. data/ext/version.rb +5 -13
  144. data/lib/carray/arrow_tensor.rb +401 -0
  145. data/lib/carray/attribute.rb +166 -0
  146. data/lib/carray/autoload_carray.rb +220 -0
  147. data/lib/carray/autoload_method_extension.rb +44 -0
  148. data/lib/carray/axis_group.rb +711 -0
  149. data/lib/carray/basics.rb +481 -0
  150. data/lib/carray/bincount_nd.rb +358 -0
  151. data/lib/carray/block_iterator.rb +604 -0
  152. data/lib/carray/boolean_reduce.rb +109 -0
  153. data/lib/carray/categorical.rb +561 -0
  154. data/lib/carray/categorical_iterator.rb +1062 -0
  155. data/lib/carray/complex.rb +150 -0
  156. data/lib/carray/conditional.rb +216 -0
  157. data/lib/carray/const_string.rb +228 -0
  158. data/lib/carray/construct.rb +139 -328
  159. data/lib/carray/core_extensions.rb +240 -0
  160. data/lib/carray/data_type_extension.rb +233 -0
  161. data/lib/carray/fixlen_string.rb +95 -0
  162. data/lib/carray/frame/concat.rb +132 -0
  163. data/lib/carray/frame/convert.rb +95 -0
  164. data/lib/carray/frame/csv_parser.rb +211 -0
  165. data/lib/carray/frame/frame.rb +649 -0
  166. data/lib/carray/frame/group.rb +186 -0
  167. data/lib/carray/frame/io.rb +164 -0
  168. data/lib/carray/frame/join.rb +248 -0
  169. data/lib/carray/frame/records.rb +99 -0
  170. data/lib/carray/frame/sort.rb +113 -0
  171. data/lib/carray/frame/verbs.rb +299 -0
  172. data/lib/carray/frame.rb +16 -0
  173. data/lib/carray/histogram.rb +512 -0
  174. data/lib/carray/inspect.rb +37 -20
  175. data/lib/carray/iterator.rb +57 -349
  176. data/lib/carray/lazy.rb +889 -0
  177. data/lib/carray/mask_gap_fill.rb +200 -0
  178. data/lib/carray/math.rb +78 -342
  179. data/lib/carray/meld_reduce.rb +289 -0
  180. data/lib/carray/methods/align_addr.rb +116 -0
  181. data/lib/carray/methods/bin.rb +128 -0
  182. data/lib/carray/methods/bincount.rb +87 -0
  183. data/lib/carray/methods/bit_string.rb +92 -0
  184. data/lib/carray/methods/broadcast.rb +63 -0
  185. data/lib/carray/methods/choose.rb +39 -0
  186. data/lib/carray/methods/composition.rb +280 -0
  187. data/lib/carray/methods/gather_nd.rb +206 -0
  188. data/lib/carray/methods/index.rb +39 -0
  189. data/lib/carray/methods/insert_block.rb +99 -0
  190. data/lib/carray/methods/is_in.rb +141 -0
  191. data/lib/carray/methods/join.rb +90 -0
  192. data/lib/carray/methods/locate_addr.rb +47 -0
  193. data/lib/carray/methods/mask_duplicates.rb +41 -0
  194. data/lib/carray/methods/meshgrid.rb +91 -0
  195. data/lib/carray/methods/mode.rb +126 -0
  196. data/lib/carray/methods/nunique.rb +46 -0
  197. data/lib/carray/methods/resize.rb +56 -0
  198. data/lib/carray/methods/snap.rb +156 -0
  199. data/lib/carray/methods/string_format.rb +57 -0
  200. data/lib/carray/methods/unique.rb +47 -0
  201. data/lib/carray/methods/value_counts.rb +71 -0
  202. data/lib/carray/mkmf.rb +124 -101
  203. data/lib/carray/runtime.rb +108 -0
  204. data/lib/carray/serialize.rb +478 -167
  205. data/lib/carray/slab_iterator.rb +292 -0
  206. data/lib/carray/stack.rb +291 -0
  207. data/lib/carray/string.rb +56 -180
  208. data/lib/carray/string_operation_extension.rb +289 -0
  209. data/lib/carray/struct.rb +335 -323
  210. data/lib/carray/struct_builder.rb +697 -0
  211. data/lib/carray/table.rb +41 -2
  212. data/lib/carray/time.rb +2255 -38
  213. data/lib/carray/window_iterator.rb +655 -0
  214. data/lib/carray.rb +55 -57
  215. metadata +163 -130
  216. data/Rakefile +0 -51
  217. data/TODO.md +0 -18
  218. data/ext/ca_iter_block.c +0 -257
  219. data/ext/ca_iter_dimension.c +0 -299
  220. data/ext/ca_iter_window.c +0 -214
  221. data/ext/ca_obj_mapping.c +0 -644
  222. data/ext/carray_iterator.c +0 -641
  223. data/ext/carray_math.rb +0 -850
  224. data/ext/carray_numeric.c +0 -259
  225. data/ext/carray_sort_addr.c +0 -254
  226. data/ext/carray_stat.c +0 -2100
  227. data/ext/carray_stat_proc.rb +0 -1999
  228. data/ext/mkmath.rb +0 -741
  229. data/ext/ruby_ccomplex.c +0 -509
  230. data/ext/ruby_float_func.c +0 -86
  231. data/lib/carray/array.rb +0 -8
  232. data/lib/carray/autoload/autoload_base.rb +0 -19
  233. data/lib/carray/autoload/autoload_gem_cairo.rb +0 -9
  234. data/lib/carray/autoload/autoload_gem_ffi.rb +0 -9
  235. data/lib/carray/autoload/autoload_gem_gnuplot.rb +0 -2
  236. data/lib/carray/autoload/autoload_gem_io_csv.rb +0 -14
  237. data/lib/carray/autoload/autoload_gem_io_pg.rb +0 -6
  238. data/lib/carray/autoload/autoload_gem_io_sqlite3.rb +0 -12
  239. data/lib/carray/autoload/autoload_gem_narray.rb +0 -10
  240. data/lib/carray/autoload/autoload_gem_numo_narray.rb +0 -15
  241. data/lib/carray/autoload/autoload_gem_opencv.rb +0 -16
  242. data/lib/carray/autoload/autoload_gem_random.rb +0 -8
  243. data/lib/carray/autoload/autoload_gem_rmagick.rb +0 -23
  244. data/lib/carray/autoload/autoload_gem_zimg.rb +0 -3
  245. data/lib/carray/autoload/autoload_io_imagemagick.rb +0 -6
  246. data/lib/carray/autoload/autoload_math_histogram.rb +0 -5
  247. data/lib/carray/autoload/autoload_math_recurrence.rb +0 -6
  248. data/lib/carray/autoload/autoload_object_iterator.rb +0 -1
  249. data/lib/carray/autoload/autoload_object_link.rb +0 -1
  250. data/lib/carray/autoload/autoload_object_pack.rb +0 -2
  251. data/lib/carray/autoload.rb +0 -141
  252. data/lib/carray/basic.rb +0 -191
  253. data/lib/carray/broadcast.rb +0 -101
  254. data/lib/carray/compose.rb +0 -315
  255. data/lib/carray/convert.rb +0 -115
  256. data/lib/carray/info.rb +0 -110
  257. data/lib/carray/io/imagemagick.rb +0 -235
  258. data/lib/carray/mask.rb +0 -102
  259. data/lib/carray/math/histogram.rb +0 -177
  260. data/lib/carray/math/recurrence.rb +0 -93
  261. data/lib/carray/object/ca_obj_iterator.rb +0 -50
  262. data/lib/carray/object/ca_obj_link.rb +0 -50
  263. data/lib/carray/object/ca_obj_pack.rb +0 -99
  264. data/lib/carray/obsolete.rb +0 -256
  265. data/lib/carray/ordering.rb +0 -181
  266. data/lib/carray/testing.rb +0 -51
  267. data/lib/carray/transform.rb +0 -109
  268. data/misc/Methods.ja.md +0 -182
  269. data/misc/NOTE +0 -51
  270. data/spec/Classes/CABitfield_spec.rb +0 -58
  271. data/spec/Classes/CABlockIterator_spec.rb +0 -114
  272. data/spec/Classes/CABlock_spec.rb +0 -205
  273. data/spec/Classes/CAField_spec.rb +0 -39
  274. data/spec/Classes/CAGrid_spec.rb +0 -75
  275. data/spec/Classes/CAMap_spec.rb +0 -0
  276. data/spec/Classes/CAMapping_spec.rb +0 -105
  277. data/spec/Classes/CAObject_attribute_spec.rb +0 -33
  278. data/spec/Classes/CAObject_spec.rb +0 -33
  279. data/spec/Classes/CARefer_spec.rb +0 -93
  280. data/spec/Classes/CARepeat_spec.rb +0 -65
  281. data/spec/Classes/CASelect_spec.rb +0 -22
  282. data/spec/Classes/CAShift_spec.rb +0 -16
  283. data/spec/Classes/CAStruct_spec.rb +0 -71
  284. data/spec/Classes/CATranspose_spec.rb +0 -60
  285. data/spec/Classes/CAUnboudRepeat_spec.rb +0 -102
  286. data/spec/Classes/CAWindow_spec.rb +0 -54
  287. data/spec/Classes/CAWrap_spec.rb +0 -8
  288. data/spec/Classes/CArray_spec.rb +0 -184
  289. data/spec/Classes/CScalar_spec.rb +0 -55
  290. data/spec/Classes/ex1.rb +0 -46
  291. data/spec/Features/feature_130_spec.rb +0 -19
  292. data/spec/Features/feature_attributes_spec.rb +0 -280
  293. data/spec/Features/feature_boolean_spec.rb +0 -98
  294. data/spec/Features/feature_broadcast.rb +0 -116
  295. data/spec/Features/feature_cast_function.rb +0 -19
  296. data/spec/Features/feature_cast_spec.rb +0 -33
  297. data/spec/Features/feature_class_spec.rb +0 -84
  298. data/spec/Features/feature_complex_spec.rb +0 -42
  299. data/spec/Features/feature_composite_spec.rb +0 -124
  300. data/spec/Features/feature_convert_spec.rb +0 -46
  301. data/spec/Features/feature_copy_spec.rb +0 -123
  302. data/spec/Features/feature_creation_spec.rb +0 -84
  303. data/spec/Features/feature_element_spec.rb +0 -144
  304. data/spec/Features/feature_extream_spec.rb +0 -54
  305. data/spec/Features/feature_generate_spec.rb +0 -74
  306. data/spec/Features/feature_index_spec.rb +0 -69
  307. data/spec/Features/feature_mask_spec.rb +0 -580
  308. data/spec/Features/feature_math_spec.rb +0 -97
  309. data/spec/Features/feature_order_spec.rb +0 -146
  310. data/spec/Features/feature_ref_store_spec.rb +0 -209
  311. data/spec/Features/feature_serialization_spec.rb +0 -125
  312. data/spec/Features/feature_stat_spec.rb +0 -397
  313. data/spec/Features/feature_virtual_spec.rb +0 -48
  314. data/spec/Features/method_eq_spec.rb +0 -81
  315. data/spec/Features/method_is_nan_spec.rb +0 -12
  316. data/spec/Features/method_map_spec.rb +0 -54
  317. data/spec/Features/method_max_with.rb +0 -20
  318. data/spec/Features/method_min_with.rb +0 -19
  319. data/spec/Features/method_ne_spec.rb +0 -18
  320. data/spec/Features/method_project_spec.rb +0 -188
  321. data/spec/Features/method_ref_spec.rb +0 -27
  322. data/spec/Features/method_round_spec.rb +0 -11
  323. data/spec/Features/method_s_linspace_spec.rb +0 -48
  324. data/spec/Features/method_s_span_spec.rb +0 -14
  325. data/spec/Features/method_seq_spec.rb +0 -47
  326. data/spec/Features/method_sort_with.rb +0 -43
  327. data/spec/Features/method_sorted_with.rb +0 -29
  328. data/spec/Features/method_span_spec.rb +0 -42
  329. data/spec/Features/method_wrap_readonly_spec.rb +0 -43
  330. data/spec/UnitTest/test_CAVirtual.rb +0 -214
  331. data/spec/spec_all.rb +0 -10
  332. data/utils/ca_ase.rb +0 -21
  333. data/utils/ca_methods.rb +0 -15
  334. data/utils/cast_checker.rb +0 -30
  335. data/utils/convert_test.rb +0 -73
  336. data/utils/extract_yard.rb +0 -22
  337. data/utils/guess_shape.rb +0 -76
  338. data/utils/monkey_patch_methods.rb +0 -62
  339. data/utils/remove_resource_fork.sh +0 -5
data/ext/ca_obj_farray.c CHANGED
@@ -1,440 +1,69 @@
1
1
  /* ---------------------------------------------------------------------------
2
2
 
3
- ca_obj_farray.c
4
-
5
- This file is part of Ruby/CArray extension library.
6
-
7
- Copyright (C) 2005-2020 Hiroki Motoyoshi
3
+ CAFarray: a CAStride view that exposes a row-major parent in
4
+ column-major (Fortran) order. Pure typedef of CAStride
5
+ (no extra state); only the dim / stride layout differs.
8
6
 
9
7
  ---------------------------------------------------------------------------- */
10
8
 
11
9
  #include "carray.h"
12
10
 
13
- typedef struct {
14
- int16_t obj_type;
15
- int8_t data_type;
16
- int8_t ndim;
17
- int32_t flags;
18
- ca_size_t bytes;
19
- ca_size_t elements;
20
- ca_size_t *dim;
21
- char *ptr;
22
- CArray *mask;
23
- CArray *parent;
24
- uint32_t attach;
25
- uint8_t nosync;
26
- /* --------------- */
27
- ca_size_t step;
28
- } CAFarray;
29
-
30
- const rb_data_type_t cafarray_data_type = {
31
- .parent = &cavirtual_data_type,
32
- .wrap_struct_name = "CAFarray",
33
- .function = {
34
- .dmark = ca_mark,
35
- .dfree = ca_free,
36
- .dsize = NULL,
37
- .dcompact = NULL
38
- },
39
- .flags = RUBY_TYPED_FREE_IMMEDIATELY
40
- };
41
-
42
- const rb_data_type_t cafarray_mask_data_type = {
43
- .parent = &cavirtual_data_type,
44
- .wrap_struct_name = "CAFarrayMask",
45
- .function = {
46
- .dmark = NULL,
47
- .dfree = ca_free_nop,
48
- .dsize = NULL,
49
- .dcompact = NULL
50
- },
51
- .flags = RUBY_TYPED_FREE_IMMEDIATELY
52
- };
11
+ extern ca_operation_function_t ca_stride_func;
53
12
 
54
13
  static int8_t CA_OBJ_FARRAY;
55
14
 
56
- static VALUE rb_cCAFarray;
57
- static VALUE rb_cCAFarrayMask;
58
-
59
- /* yard:
60
- class CAFArray < CAVirtual # :nodoc:
61
- end
62
- */
15
+ VALUE rb_cCAFarray;
16
+ VALUE rb_cCAFarrayMask;
63
17
 
64
18
  /* ------------------------------------------------------------------- */
65
19
 
66
- int
67
- ca_farray_setup (CAFarray *ca, CArray *parent)
68
- {
69
- int8_t ndim, data_type;
70
- ca_size_t *dim, elements, bytes;
71
- int i;
72
-
73
- /* check arguments */
74
-
75
- data_type = parent->data_type;
76
- ndim = parent->ndim;
77
- dim = parent->dim;
78
- bytes = parent->bytes;
79
- elements = parent->elements;
20
+ /* CAFarray = column-major (Fortran) view of a row-major parent.
21
+ For a parent of shape (d_0, d_1, ..., d_{n-1}) and byte size B, the
22
+ view has shape (d_{n-1}, ..., d_1, d_0) and reads parent's memory in
23
+ column-major order:
80
24
 
81
- ca->obj_type = CA_OBJ_FARRAY;
82
- ca->data_type = data_type;
83
- ca->flags = 0;
84
- ca->ndim = ndim;
85
- ca->bytes = bytes;
86
- ca->elements = elements;
87
- ca->ptr = NULL;
88
- ca->mask = NULL;
89
- ca->dim = ALLOC_N(ca_size_t, ndim);
25
+ view dim[k] = parent->dim[n-1-k]
26
+ view strides[k] = parent_byte_stride[n-1-k]
27
+ view base_offset = 0
90
28
 
91
- ca->parent = parent;
92
- ca->attach = 0;
93
- ca->nosync = 0;
94
-
95
- for (i=0; i<ndim; i++) {
96
- ca->dim[i] = dim[ndim-1-i];
29
+ where parent_byte_stride[j] = B * Π_{i>j} parent->dim[i]. */
30
+ int
31
+ ca_farray_setup (CAStride *ca, CArray *parent)
32
+ {
33
+ int8_t ndim = parent->ndim;
34
+ ca_size_t parent_byte_stride[CA_RANK_MAX];
35
+ ca_size_t newdim[CA_RANK_MAX];
36
+ ca_size_t strides[CA_RANK_MAX];
37
+ ca_size_t s = parent->bytes;
38
+ int8_t i;
39
+
40
+ for (i = ndim - 1; i >= 0; i--) {
41
+ parent_byte_stride[i] = s;
42
+ s *= parent->dim[i];
97
43
  }
98
-
99
- ca->step = 1;
100
- for (i=1; i<ndim; i++) {
101
- ca->step *= dim[i];
44
+ for (i = 0; i < ndim; i++) {
45
+ newdim[i] = parent->dim[ndim - 1 - i];
46
+ strides[i] = parent_byte_stride[ndim - 1 - i];
102
47
  }
103
48
 
104
- if ( ca_has_mask(parent) ) {
105
- ca_create_mask(ca);
106
- }
49
+ ca_stride_setup(ca, CA_OBJ_FARRAY, parent,
50
+ parent->data_type, parent->bytes,
51
+ ndim, newdim, strides, 0);
107
52
 
108
- if ( ca_is_scalar(parent) ) {
53
+ if (ca_is_scalar(parent)) {
109
54
  ca_set_flag(ca, CA_FLAG_SCALAR);
110
55
  }
111
-
112
56
  return 0;
113
57
  }
114
58
 
115
- CAFarray *
59
+ CAStride *
116
60
  ca_farray_new (CArray *parent)
117
61
  {
118
- CAFarray *ca = ALLOC(CAFarray);
62
+ CAStride *ca = (CAStride *) ca_array_alloc(CA_OBJ_FARRAY, parent->ndim);
119
63
  ca_farray_setup(ca, parent);
120
64
  return ca;
121
65
  }
122
66
 
123
- static void
124
- free_ca_farray (void *ap)
125
- {
126
- CAFarray *ca = (CAFarray *) ap;
127
- if ( ca != NULL ) {
128
- ca_free(ca->mask);
129
- xfree(ca->dim);
130
- xfree(ca);
131
- }
132
- }
133
-
134
- /* ------------------------------------------------------------------- */
135
-
136
- static void *
137
- ca_farray_func_clone (void *ap)
138
- {
139
- CAFarray *ca = (CAFarray *) ap;
140
- return ca_farray_new(ca->parent);
141
- }
142
-
143
- #define ca_farray_func_ptr_at_addr ca_array_func_ptr_at_addr
144
- #define ca_farray_func_ptr_at_index ca_array_func_ptr_at_index
145
-
146
- static void
147
- ca_farray_func_fetch_index (void *ap, ca_size_t *idx, void *ptr)
148
- {
149
- CAFarray *ca = (CAFarray *) ap;
150
- int8_t ndim = ca->ndim;
151
- ca_size_t idx0[CA_RANK_MAX];
152
- int i;
153
- for (i=0; i<ndim; i++) {
154
- idx0[i] = idx[ndim-1-i];
155
- }
156
- ca_fetch_index(ca->parent, idx0, ptr);
157
- }
158
-
159
- static void
160
- ca_farray_func_store_index (void *ap, ca_size_t *idx, void *ptr)
161
- {
162
- CAFarray *ca = (CAFarray *) ap;
163
- int8_t ndim = ca->ndim;
164
- ca_size_t idx0[CA_RANK_MAX];
165
- int i;
166
- for (i=0; i<ndim; i++) {
167
- idx0[i] = idx[ndim-1-i];
168
- }
169
- ca_store_index(ca->parent, idx0, ptr);
170
- }
171
-
172
- static void
173
- ca_farray_func_allocate (void *ap)
174
- {
175
- CAFarray *ca = (CAFarray *) ap;
176
- ca_attach(ca->parent);
177
- /* ca->ptr = ALLOC_N(char, ca_length(ca)); */
178
- ca->ptr = malloc_with_check(ca_length(ca));
179
- }
180
-
181
- static void ca_fa_attach (CAFarray *ca);
182
- static void ca_fa_sync (CAFarray *ca);
183
-
184
- static void
185
- ca_farray_func_attach (void *ap)
186
- {
187
- CAFarray *ca = (CAFarray *) ap;
188
- ca_attach(ca->parent);
189
- /* ca->ptr = ALLOC_N(char, ca_length(ca)); */
190
- ca->ptr = malloc_with_check(ca_length(ca));
191
- ca_fa_attach(ca);
192
- }
193
-
194
- static void
195
- ca_farray_func_sync (void *ap)
196
- {
197
- CAFarray *ca = (CAFarray *) ap;
198
- ca_fa_sync(ca);
199
- ca_sync(ca->parent);
200
- }
201
-
202
- static void
203
- ca_farray_func_detach (void *ap)
204
- {
205
- CAFarray *ca = (CAFarray *) ap;
206
- free(ca->ptr);
207
- ca->ptr = NULL;
208
- ca_detach(ca->parent);
209
- }
210
-
211
- static void
212
- ca_farray_func_copy_data (void *ap, void *ptr)
213
- {
214
- CAFarray *ca = (CAFarray *) ap;
215
- char *ptr0 = ca->ptr;
216
- ca_attach(ca->parent);
217
- ca->ptr = ptr;
218
- ca_fa_attach(ca);
219
- ca->ptr = ptr0;
220
- ca_detach(ca->parent);
221
- }
222
-
223
- static void
224
- ca_farray_func_sync_data (void *ap, void *ptr)
225
- {
226
- CAFarray *ca = (CAFarray *) ap;
227
- char *ptr0 = ca->ptr;
228
- ca_attach(ca->parent);
229
- ca->ptr = ptr;
230
- ca_fa_sync(ca);
231
- ca->ptr = ptr0;
232
- ca_sync(ca->parent);
233
- ca_detach(ca->parent);
234
- }
235
-
236
- static void
237
- ca_farray_func_fill_data (void *ap, void *ptr)
238
- {
239
- CAFarray *ca = (CAFarray *) ap;
240
- ca_fill(ca->parent, ptr);
241
- }
242
-
243
- static void
244
- ca_farray_func_create_mask (void *ap)
245
- {
246
- CAFarray *ca = (CAFarray *) ap;
247
- ca_update_mask(ca->parent);
248
- if ( ! ca->parent->mask ) {
249
- ca_create_mask(ca->parent);
250
- }
251
- ca->mask = (CArray *) ca_farray_new(ca->parent->mask);
252
- }
253
-
254
- ca_operation_function_t ca_farray_func = {
255
- -1, /* CA_OBJ_FARRAY */
256
- CA_VIRTUAL_ARRAY,
257
- free_ca_farray,
258
- ca_farray_func_clone,
259
- ca_farray_func_ptr_at_addr,
260
- ca_farray_func_ptr_at_index,
261
- NULL,
262
- ca_farray_func_fetch_index,
263
- NULL,
264
- ca_farray_func_store_index,
265
- ca_farray_func_allocate,
266
- ca_farray_func_attach,
267
- ca_farray_func_sync,
268
- ca_farray_func_detach,
269
- ca_farray_func_copy_data,
270
- ca_farray_func_sync_data,
271
- ca_farray_func_fill_data,
272
- ca_farray_func_create_mask,
273
- };
274
-
275
- /* ------------------------------------------------------------------- */
276
-
277
-
278
- static void
279
- ca_fa_attach_loop (CAFarray *ca, int8_t level, ca_size_t *idx, ca_size_t *idx0)
280
- {
281
- ca_size_t step = ca->step;
282
- ca_size_t dim = ca->dim[level];
283
- ca_size_t i;
284
- if ( level == ca->ndim - 1 ) {
285
- idx[level] = 0;
286
- idx0[0] = 0;
287
- switch ( ca->bytes ) {
288
- case 1:
289
- {
290
- int8_t *p = ca_ptr_at_index(ca, idx);
291
- int8_t *q = ca_ptr_at_index(ca->parent, idx0);
292
- for (i=0; i<dim; i++) {
293
- *p++ = *q;
294
- q += step;
295
- }
296
- }
297
- break;
298
- case 2:
299
- {
300
- int16_t *p = ca_ptr_at_index(ca, idx);
301
- int16_t *q = ca_ptr_at_index(ca->parent, idx0);
302
- for (i=0; i<dim; i++) {
303
- *p++ = *q;
304
- q += step;
305
- }
306
- }
307
- break;
308
- case 4:
309
- {
310
- int32_t *p = ca_ptr_at_index(ca, idx);
311
- int32_t *q = ca_ptr_at_index(ca->parent, idx0);
312
- for (i=0; i<dim; i++) {
313
- *p++ = *q;
314
- q += step;
315
- }
316
- }
317
- break;
318
- case 8:
319
- {
320
- float64_t *p = ca_ptr_at_index(ca, idx);
321
- float64_t *q = ca_ptr_at_index(ca->parent, idx0);
322
- for (i=0; i<dim; i++) {
323
- *p++ = *q;
324
- q += step;
325
- }
326
- }
327
- break;
328
- default:
329
- {
330
- char *p = ca_ptr_at_index(ca, idx);
331
- char *q = ca_ptr_at_index(ca->parent, idx0);
332
- for (i=0; i<dim; i++) {
333
- memcpy(p, q, ca->bytes);
334
- p += ca->bytes;
335
- q += step * ca->bytes;
336
- }
337
- }
338
- }
339
- }
340
- else {
341
- int level0 = ca->ndim - 1 - level;
342
- for (i=0; i<dim; i++) {
343
- idx[level] = i;
344
- idx0[level0] = i;
345
- ca_fa_attach_loop(ca, level+1, idx, idx0);
346
- }
347
- }
348
- }
349
-
350
- static void
351
- ca_fa_attach (CAFarray *ca)
352
- {
353
- ca_size_t idx[CA_RANK_MAX];
354
- ca_size_t idx0[CA_RANK_MAX];
355
- ca_fa_attach_loop(ca, 0, idx, idx0);
356
- }
357
-
358
- static void
359
- ca_fa_sync_loop (CAFarray *ca, int8_t level, ca_size_t *idx, ca_size_t *idx0)
360
- {
361
- ca_size_t step = ca->step;
362
- ca_size_t dim = ca->dim[level];
363
- ca_size_t i;
364
-
365
- if ( level == ca->ndim - 1 ) {
366
- idx[level] = 0;
367
- idx0[0] = 0;
368
- switch ( ca->bytes ) {
369
- case 1:
370
- {
371
- int8_t *p = ca_ptr_at_index(ca, idx);
372
- int8_t *q = ca_ptr_at_index(ca->parent, idx0);
373
- for (i=0; i<dim; i++) {
374
- *q = *p++;
375
- q += step;
376
- }
377
- }
378
- break;
379
- case 2:
380
- {
381
- int16_t *p = ca_ptr_at_index(ca, idx);
382
- int16_t *q = ca_ptr_at_index(ca->parent, idx0);
383
- for (i=0; i<dim; i++) {
384
- *q = *p++;
385
- q += step;
386
- }
387
- }
388
- break;
389
- case 4:
390
- {
391
- int32_t *p = ca_ptr_at_index(ca, idx);
392
- int32_t *q = ca_ptr_at_index(ca->parent, idx0);
393
- for (i=0; i<dim; i++) {
394
- *q = *p++;
395
- q += step;
396
- }
397
- }
398
- break;
399
- case 8:
400
- {
401
- float64_t *p = ca_ptr_at_index(ca, idx);
402
- float64_t *q = ca_ptr_at_index(ca->parent, idx0);
403
- for (i=0; i<dim; i++) {
404
- *q = *p++;
405
- q += step;
406
- }
407
- }
408
- break;
409
- default:
410
- {
411
- char *p = ca_ptr_at_index(ca, idx);
412
- char *q = ca_ptr_at_index(ca->parent, idx0);
413
- for (i=0; i<dim; i++) {
414
- memcpy(q, p, ca->bytes);
415
- p += ca->bytes;
416
- q += step * ca->bytes;
417
- }
418
- }
419
- }
420
- }
421
- else {
422
- for (i=0; i<dim; i++) {
423
- idx[level] = i;
424
- idx0[ca->ndim - 1 - level] = i;
425
- ca_fa_sync_loop(ca, level+1, idx, idx0);
426
- }
427
- }
428
- }
429
-
430
- static void
431
- ca_fa_sync (CAFarray *ca)
432
- {
433
- ca_size_t idx[CA_RANK_MAX];
434
- ca_size_t idx0[CA_RANK_MAX];
435
- ca_fa_sync_loop(ca, 0, idx, idx0);
436
- }
437
-
438
67
  /* ------------------------------------------------------------------- */
439
68
 
440
69
  VALUE
@@ -442,68 +71,52 @@ rb_ca_farray_new (VALUE cary)
442
71
  {
443
72
  volatile VALUE obj;
444
73
  CArray *parent;
445
- CAFarray *ca;
74
+ CAStride *ca;
446
75
  rb_check_carray_object(cary);
447
76
  TypedData_Get_Struct(cary, CArray, &carray_data_type, parent);
448
77
  ca = ca_farray_new(parent);
449
78
  obj = ca_wrap_struct(ca);
450
79
  rb_ca_set_parent(obj, cary);
451
- rb_ca_data_type_inherit(obj, cary);
452
80
  return obj;
453
81
  }
454
82
 
455
- /* yard:
456
- class CArray
457
- # create the virtual transposed array which dimension order is reversed.
458
- def t
459
- end
460
- end
461
- */
462
-
83
+ /* CArray#farray -- column-major view (dimension order reversed). */
463
84
  VALUE
464
85
  rb_ca_farray (VALUE self)
465
86
  {
466
87
  return rb_ca_farray_new(self);
467
88
  }
468
89
 
469
- static VALUE
470
- rb_ca_farray_s_allocate (VALUE klass)
471
- {
472
- CAFarray *ca;
473
- return TypedData_Make_Struct(klass, CAFarray, &cafarray_data_type, ca);
474
- }
475
-
476
90
  static VALUE
477
91
  rb_ca_farray_initialize_copy (VALUE self, VALUE other)
478
92
  {
479
- CAFarray *ca, *cs;
480
-
481
- TypedData_Get_Struct(self, CAFarray, &cafarray_data_type, ca);
482
- TypedData_Get_Struct(other, CAFarray, &cafarray_data_type, cs);
483
-
484
- ca_farray_setup(ca, cs->parent);
485
-
93
+ CAStride *ca, *cs;
94
+ TypedData_Get_Struct(self, CAStride, &castride_data_type, ca);
95
+ TypedData_Get_Struct(other, CAStride, &castride_data_type, cs);
96
+ if ( ca_func[CA_OBJ_FARRAY].pool_init ) {
97
+ ca_array_pool_alloc(ca, CA_OBJ_FARRAY, cs->ndim);
98
+ }
99
+ ca_stride_setup(ca, CA_OBJ_FARRAY, cs->parent,
100
+ cs->data_type, cs->bytes,
101
+ cs->ndim, cs->dim, cs->strides, cs->base_offset);
486
102
  return self;
487
103
  }
488
104
 
489
105
  void
490
- Init_ca_obj_farray ()
106
+ Init_ca_obj_farray (void)
491
107
  {
492
- rb_cCAFarray = rb_define_class("CAFarray", rb_cCAVirtual);
108
+ rb_cCAFarray = rb_define_class("CAFarray", rb_cCAStride);
493
109
  rb_cCAFarrayMask = rb_define_class("CAFarrayMask", rb_cCAFarray);
494
110
 
495
- CA_OBJ_FARRAY = ca_install_obj_type(rb_cCAFarray,
496
- &cafarray_data_type,
497
- rb_cCAFarrayMask,
498
- &cafarray_mask_data_type, ca_farray_func);
111
+ CA_OBJ_FARRAY = ca_install_obj_type(rb_cCAFarray,
112
+ &castride_data_type,
113
+ rb_cCAFarrayMask,
114
+ &castride_mask_data_type,
115
+ &ca_stride_func, sizeof(ca_stride_func));
499
116
  rb_define_const(rb_cObject, "CA_OBJ_FARRAY", INT2NUM(CA_OBJ_FARRAY));
500
117
 
501
118
  rb_define_method(rb_cCArray, "farray", rb_ca_farray, 0);
502
- rb_define_method(rb_cCArray, "t", rb_ca_farray, 0);
503
119
 
504
- rb_define_alloc_func(rb_cCAFarray, rb_ca_farray_s_allocate);
505
120
  rb_define_method(rb_cCAFarray, "initialize_copy",
506
121
  rb_ca_farray_initialize_copy, 1);
507
122
  }
508
-
509
-