cancer_registry_reporting_test_kit 0.9.0

data/lib/cancer_registry_reporting_test_kit/hdea_suite/generated/v1.0.0/medication_administration/metadata.yml

@@ -0,0 +1,48 @@
+---
+:name: mcode_cancer_related_medication_administration
+:class_name: McodeCancerRelatedMedicationAdministrationSequence
+:version: v1.0.0
+:reformatted_version: v100
+:resource: MedicationAdministration
+:profile_url: http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-cancer-related-medication-administration
+:profile_name: Cancer-Related Medication Administration Profile
+:profile_version: 3.0.0
+:title: Cancer-Related Medication Administration
+:short_description: Verify support for the server capabilities required by the Cancer-Related
+  Medication Administration Profile.
+:must_supports:
+  :extensions:
+  - :id: MedicationAdministration.extension:treatmentIntent
+    :path: extension
+    :url: http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-procedure-intent
+  :slices: []
+  :elements:
+  - :path: status
+  - :path: statusReason
+  - :path: medication[x]
+    :types:
+    - Reference
+  - :path: subject
+    :types:
+    - Reference
+    :target_profiles:
+    - http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-cancer-patient
+  - :path: effective[x]
+  - :path: reasonCode
+  - :path: reasonReference
+    :types:
+    - Reference
+    :target_profiles:
+    - http://hl7.org/fhir/us/core/StructureDefinition/us-core-condition-problems-health-concerns
+:mandatory_elements:
+- MedicationAdministration.status
+- MedicationAdministration.medication[x]
+- MedicationAdministration.subject
+- MedicationAdministration.effective[x]
+- MedicationAdministration.performer.actor
+:tests:
+- :id: ccrr_v100_medication_administration_must_support_test
+  :file_name: medication_administration_must_support_test.rb
+- :id: ccrr_v100_medication_administration_validation_test
+  :file_name: medication_administration_validation_test.rb
+:id: ccrr_v100_medication_administration

data/lib/cancer_registry_reporting_test_kit/hdea_suite/generated/v1.0.0/medication_request/medication_request_must_support_test.rb

@@ -0,0 +1,57 @@
+# frozen_string_literal: true
+
+require_relative '../../../../must_support_test'
+require_relative '../../../../hdea_generator/group_metadata'
+
+module CancerRegistryReportingTestKit
+  module HDEAV100
+    class MedicationRequestMustSupportTest < Inferno::Test
+      include CancerRegistryReportingTestKit::MustSupportTest
+
+      title 'Cancer-Related Medication Request profile must support element coverage'
+      description %(
+        This test looks across all instances
+        associated with the [Cancer-Related Medication Request profile](http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-cancer-related-medication-request|3.0.0)
+        found in the provided report Bundles and verifies that they
+        contain populated examples of the following must support elements
+        defined in the profile:
+
+        * MedicationRequest.authoredOn
+        * MedicationRequest.category
+        * MedicationRequest.category:us-core
+        * MedicationRequest.dosageInstruction
+        * MedicationRequest.dosageInstruction.text
+        * MedicationRequest.encounter
+        * MedicationRequest.extension:treatmentIntent
+        * MedicationRequest.intent
+        * MedicationRequest.medication[x]
+        * MedicationRequest.reasonCode
+        * MedicationRequest.reasonReference
+        * MedicationRequest.reportedBoolean
+        * MedicationRequest.reportedReference
+        * MedicationRequest.requester
+        * MedicationRequest.status
+        * MedicationRequest.statusReason
+        * MedicationRequest.subject
+      )
+
+      id :ccrr_v100_medication_request_must_support_test
+
+      def resource_type
+        'MedicationRequest'
+      end
+
+      def self.metadata
+        @metadata ||= HdeaGenerator::GroupMetadata.new(YAML.load_file(File.join(__dir__, 'metadata.yml'), aliases: true))
+      end
+
+      def scratch_resources
+        scratch[:medication_request_resources] ||= {}
+      end
+
+      run do
+        perform_must_support_test(all_scratch_resources)
+      end
+    end
+  end
+end

data/lib/cancer_registry_reporting_test_kit/hdea_suite/generated/v1.0.0/medication_request/medication_request_validation_test.rb

@@ -0,0 +1,35 @@
+# frozen_string_literal: true
+
+require_relative '../../../../validation_test'
+
+module CancerRegistryReportingTestKit
+  module HDEAV100
+    class MedicationRequestValidationTest < Inferno::Test
+      include CancerRegistryReportingTestKit::ValidationTest
+
+      id :ccrr_v100_medication_request_validation_test
+      title 'Cancer-Related Medication Request profile conformance'
+      description %(
+        This test verifies that MedicationRequest instances
+        found in the Plan of Treatment sections of the provided reports conform to the
+        [Cancer-Related Medication Request profile](http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-cancer-related-medication-request|3.0.0).
+      )
+      
+
+      def resource_type
+        'MedicationRequest'
+      end
+
+      def scratch_resources
+        scratch[:medication_request_resources] ||= {}
+      end
+
+      run do
+        perform_validation_test(scratch_resources[:all] || [],
+                                'http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-cancer-related-medication-request',
+                                '3.0.0',
+                                skip_if_empty: true)
+      end
+    end
+  end
+end

data/lib/cancer_registry_reporting_test_kit/hdea_suite/generated/v1.0.0/medication_request/metadata.yml

@@ -0,0 +1,86 @@
+---
+:name: mcode_cancer_related_medication_request
+:class_name: McodeCancerRelatedMedicationRequestSequence
+:version: v1.0.0
+:reformatted_version: v100
+:resource: MedicationRequest
+:profile_url: http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-cancer-related-medication-request
+:profile_name: Cancer-Related Medication Request Profile
+:profile_version: 3.0.0
+:title: Cancer-Related Medication Request
+:short_description: Verify support for the server capabilities required by the Cancer-Related
+  Medication Request Profile.
+:must_supports:
+  :extensions:
+  - :id: MedicationRequest.extension:treatmentIntent
+    :path: extension
+    :url: http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-procedure-intent
+  :slices:
+  - :slice_id: MedicationRequest.category:us-core
+    :slice_name: us-core
+    :path: category
+    :discriminator:
+      :type: requiredBinding
+      :path: ''
+      :values:
+      - :system: http://terminology.hl7.org/CodeSystem/medicationrequest-category
+        :code: inpatient
+      - :system: http://terminology.hl7.org/CodeSystem/medicationrequest-category
+        :code: outpatient
+      - :system: http://terminology.hl7.org/CodeSystem/medicationrequest-category
+        :code: community
+      - :system: http://terminology.hl7.org/CodeSystem/medicationrequest-category
+        :code: discharge
+  :elements:
+  - :path: status
+  - :path: statusReason
+  - :path: intent
+  - :path: category
+  - :path: reportedBoolean
+    :original_path: reported[x]
+  - :path: reportedReference
+    :original_path: reported[x]
+    :types:
+    - Reference
+    :target_profiles:
+    - http://hl7.org/fhir/us/core/StructureDefinition/us-core-practitioner
+  - :path: medication[x]
+    :types:
+    - Reference
+  - :path: subject
+    :types:
+    - Reference
+    :target_profiles:
+    - http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-cancer-patient
+  - :path: encounter
+    :types:
+    - Reference
+    :target_profiles:
+    - http://hl7.org/fhir/us/core/StructureDefinition/us-core-encounter
+  - :path: authoredOn
+  - :path: requester
+    :types:
+    - Reference
+    :target_profiles:
+    - http://hl7.org/fhir/us/core/StructureDefinition/us-core-practitioner
+  - :path: reasonCode
+  - :path: reasonReference
+    :types:
+    - Reference
+    :target_profiles:
+    - http://hl7.org/fhir/us/core/StructureDefinition/us-core-condition-problems-health-concerns
+  - :path: dosageInstruction
+  - :path: dosageInstruction.text
+:mandatory_elements:
+- MedicationRequest.status
+- MedicationRequest.intent
+- MedicationRequest.medication[x]
+- MedicationRequest.subject
+- MedicationRequest.requester
+- MedicationRequest.substitution.allowed[x]
+:tests:
+- :id: ccrr_v100_medication_request_must_support_test
+  :file_name: medication_request_must_support_test.rb
+- :id: ccrr_v100_medication_request_validation_test
+  :file_name: medication_request_validation_test.rb
+:id: ccrr_v100_medication_request

data/lib/cancer_registry_reporting_test_kit/hdea_suite/generated/v1.0.0/medication_statement/medication_statement_must_support_test.rb

@@ -0,0 +1,41 @@
+# frozen_string_literal: true
+
+require_relative '../../../../must_support_test'
+require_relative '../../../../hdea_generator/group_metadata'
+
+module CancerRegistryReportingTestKit
+  module HDEAV100
+    class MedicationStatementMustSupportTest < Inferno::Test
+      include CancerRegistryReportingTestKit::MustSupportTest
+
+      title 'Base MedicationStatement profile must support element coverage'
+      description %(
+        This test looks across all instances
+        associated with the [Base MedicationStatement profile](http://hl7.org/fhir/StructureDefinition/MedicationStatement|4.0.1)
+        found in the provided report Bundles and verifies that they
+        contain populated examples of the following must support elements
+        defined in the profile:
+
+
+      )
+
+      id :ccrr_v100_medication_statement_must_support_test
+
+      def resource_type
+        'MedicationStatement'
+      end
+
+      def self.metadata
+        @metadata ||= HdeaGenerator::GroupMetadata.new(YAML.load_file(File.join(__dir__, 'metadata.yml'), aliases: true))
+      end
+
+      def scratch_resources
+        scratch[:medication_statement_resources] ||= {}
+      end
+
+      run do
+        perform_must_support_test(all_scratch_resources)
+      end
+    end
+  end
+end

data/lib/cancer_registry_reporting_test_kit/hdea_suite/generated/v1.0.0/medication_statement/medication_statement_validation_test.rb

@@ -0,0 +1,35 @@
+# frozen_string_literal: true
+
+require_relative '../../../../validation_test'
+
+module CancerRegistryReportingTestKit
+  module HDEAV100
+    class MedicationStatementValidationTest < Inferno::Test
+      include CancerRegistryReportingTestKit::ValidationTest
+
+      id :ccrr_v100_medication_statement_validation_test
+      title 'Base MedicationStatement profile conformance'
+      description %(
+        This test verifies that MedicationStatement instances
+        found in the Medications and Medications Administered sections of the provided reports conform to the
+        [Base MedicationStatement profile](http://hl7.org/fhir/StructureDefinition/MedicationStatement|4.0.1).
+      )
+      
+
+      def resource_type
+        'MedicationStatement'
+      end
+
+      def scratch_resources
+        scratch[:medication_statement_resources] ||= {}
+      end
+
+      run do
+        perform_validation_test(scratch_resources[:all] || [],
+                                'http://hl7.org/fhir/StructureDefinition/MedicationStatement',
+                                '4.0.1',
+                                skip_if_empty: true)
+      end
+    end
+  end
+end

data/lib/cancer_registry_reporting_test_kit/hdea_suite/generated/v1.0.0/medication_statement/metadata.yml

@@ -0,0 +1,26 @@
+---
+:name: MedicationStatement
+:class_name: MedicationstatementSequence
+:version: v1.0.0
+:reformatted_version: v100
+:resource: MedicationStatement
+:profile_url: http://hl7.org/fhir/StructureDefinition/MedicationStatement
+:profile_name: Base MedicationStatement
+:profile_version: 4.0.1
+:title: Base MedicationStatement
+:short_description: Verify support for the server capabilities required by the Base
+  MedicationStatement.
+:must_supports:
+  :extensions: []
+  :slices: []
+  :elements: []
+:mandatory_elements:
+- MedicationStatement.status
+- MedicationStatement.medication[x]
+- MedicationStatement.subject
+:tests:
+- :id: ccrr_v100_medication_statement_must_support_test
+  :file_name: medication_statement_must_support_test.rb
+- :id: ccrr_v100_medication_statement_validation_test
+  :file_name: medication_statement_validation_test.rb
+:id: ccrr_v100_medication_statement

data/lib/cancer_registry_reporting_test_kit/hdea_suite/generated/v1.0.0/observation/metadata.yml

@@ -0,0 +1,26 @@
+---
+:name: Observation
+:class_name: ObservationSequence
+:version: v1.0.0
+:reformatted_version: v100
+:resource: Observation
+:profile_url: http://hl7.org/fhir/StructureDefinition/Observation
+:profile_name: Base Observation
+:profile_version: 4.0.1
+:title: Observation Base
+:short_description: Verify support for the server capabilities required by the Base
+  Observation.
+:must_supports:
+  :extensions: []
+  :slices: []
+  :elements: []
+:mandatory_elements:
+- Observation.status
+- Observation.code
+- Observation.component.code
+:tests:
+- :id: ccrr_v100_observation_must_support_test
+  :file_name: observation_must_support_test.rb
+- :id: ccrr_v100_observation_validation_test
+  :file_name: observation_validation_test.rb
+:id: ccrr_v100_observation

data/lib/cancer_registry_reporting_test_kit/hdea_suite/generated/v1.0.0/observation/observation_must_support_test.rb

@@ -0,0 +1,41 @@
+# frozen_string_literal: true
+
+require_relative '../../../../must_support_test'
+require_relative '../../../../hdea_generator/group_metadata'
+
+module CancerRegistryReportingTestKit
+  module HDEAV100
+    class ObservationMustSupportTest < Inferno::Test
+      include CancerRegistryReportingTestKit::MustSupportTest
+
+      title 'Base Observation profile must support element coverage'
+      description %(
+        This test looks across all instances
+        associated with the [Base Observation profile](http://hl7.org/fhir/StructureDefinition/Observation|4.0.1)
+        found in the provided report Bundles and verifies that they
+        contain populated examples of the following must support elements
+        defined in the profile:
+
+
+      )
+
+      id :ccrr_v100_observation_must_support_test
+
+      def resource_type
+        'Observation'
+      end
+
+      def self.metadata
+        @metadata ||= HdeaGenerator::GroupMetadata.new(YAML.load_file(File.join(__dir__, 'metadata.yml'), aliases: true))
+      end
+
+      def scratch_resources
+        scratch[:observation_resources] ||= {}
+      end
+
+      run do
+        perform_must_support_test(all_scratch_resources)
+      end
+    end
+  end
+end

data/lib/cancer_registry_reporting_test_kit/hdea_suite/generated/v1.0.0/observation/observation_validation_test.rb

@@ -0,0 +1,35 @@
+# frozen_string_literal: true
+
+require_relative '../../../../validation_test'
+
+module CancerRegistryReportingTestKit
+  module HDEAV100
+    class ObservationValidationTest < Inferno::Test
+      include CancerRegistryReportingTestKit::ValidationTest
+
+      id :ccrr_v100_observation_validation_test
+      title 'Base Observation profile conformance'
+      description %(
+        This test verifies that Observation instances
+        found in the Vital Signs sections of the provided reports conform to the
+        [Base Observation profile](http://hl7.org/fhir/StructureDefinition/Observation|4.0.1).
+      )
+      
+
+      def resource_type
+        'Observation'
+      end
+
+      def scratch_resources
+        scratch[:observation_resources] ||= {}
+      end
+
+      run do
+        perform_validation_test(scratch_resources[:all] || [],
+                                'http://hl7.org/fhir/StructureDefinition/Observation',
+                                '4.0.1',
+                                skip_if_empty: true)
+      end
+    end
+  end
+end

data/lib/cancer_registry_reporting_test_kit/hdea_suite/generated/v1.0.0/observation_lab/metadata.yml

@@ -0,0 +1,53 @@
+---
+:name: us_core_observation_lab
+:class_name: UsCoreObservationLabSequence
+:version: v1.0.0
+:reformatted_version: v100
+:resource: Observation
+:profile_url: http://hl7.org/fhir/us/core/StructureDefinition/us-core-observation-lab
+:profile_name: US Core Laboratory Result Observation Profile
+:profile_version: 5.0.1
+:title: Observation US Core Laboratory Result
+:short_description: Verify support for the server capabilities required by the US
+  Core Laboratory Result Observation Profile.
+:must_supports:
+  :extensions: []
+  :slices:
+  - :slice_id: Observation.category:Laboratory
+    :slice_name: Laboratory
+    :path: category
+    :discriminator:
+      :type: patternCodeableConcept
+      :path: ''
+      :code: laboratory
+      :system: http://terminology.hl7.org/CodeSystem/observation-category
+  :elements:
+  - :path: status
+  - :path: category
+  - :path: code
+  - :path: subject
+    :types:
+    - Reference
+    :target_profiles:
+    - http://hl7.org/fhir/us/core/StructureDefinition/us-core-patient
+  - :path: effectiveDateTime
+    :original_path: effective[x]
+  - :path: valueQuantity
+    :original_path: value[x]
+  - :path: valueCodeableConcept
+    :original_path: value[x]
+  - :path: valueString
+    :original_path: value[x]
+  - :path: dataAbsentReason
+:mandatory_elements:
+- Observation.status
+- Observation.category
+- Observation.code
+- Observation.subject
+- Observation.component.code
+:tests:
+- :id: ccrr_v100_observation_lab_must_support_test
+  :file_name: observation_lab_must_support_test.rb
+- :id: ccrr_v100_observation_lab_validation_test
+  :file_name: observation_lab_validation_test.rb
+:id: ccrr_v100_observation_lab

data/lib/cancer_registry_reporting_test_kit/hdea_suite/generated/v1.0.0/observation_lab/observation_lab_must_support_test.rb

@@ -0,0 +1,50 @@
+# frozen_string_literal: true
+
+require_relative '../../../../must_support_test'
+require_relative '../../../../hdea_generator/group_metadata'
+
+module CancerRegistryReportingTestKit
+  module HDEAV100
+    class ObservationLabMustSupportTest < Inferno::Test
+      include CancerRegistryReportingTestKit::MustSupportTest
+
+      title 'US Core Laboratory Result Observation profile must support element coverage'
+      description %(
+        This test looks across all instances
+        associated with the [US Core Laboratory Result Observation profile](http://hl7.org/fhir/us/core/StructureDefinition/us-core-observation-lab|5.0.1)
+        found in the provided report Bundles and verifies that they
+        contain populated examples of the following must support elements
+        defined in the profile:
+
+        * Observation.category
+        * Observation.category:Laboratory
+        * Observation.code
+        * Observation.dataAbsentReason
+        * Observation.effectiveDateTime
+        * Observation.status
+        * Observation.subject
+        * Observation.valueCodeableConcept
+        * Observation.valueQuantity
+        * Observation.valueString
+      )
+
+      id :ccrr_v100_observation_lab_must_support_test
+
+      def resource_type
+        'Observation'
+      end
+
+      def self.metadata
+        @metadata ||= HdeaGenerator::GroupMetadata.new(YAML.load_file(File.join(__dir__, 'metadata.yml'), aliases: true))
+      end
+
+      def scratch_resources
+        scratch[:observation_lab_resources] ||= {}
+      end
+
+      run do
+        perform_must_support_test(all_scratch_resources)
+      end
+    end
+  end
+end

data/lib/cancer_registry_reporting_test_kit/hdea_suite/generated/v1.0.0/observation_lab/observation_lab_validation_test.rb

@@ -0,0 +1,35 @@
+# frozen_string_literal: true
+
+require_relative '../../../../validation_test'
+
+module CancerRegistryReportingTestKit
+  module HDEAV100
+    class ObservationLabValidationTest < Inferno::Test
+      include CancerRegistryReportingTestKit::ValidationTest
+
+      id :ccrr_v100_observation_lab_validation_test
+      title 'US Core Laboratory Result Observation profile conformance'
+      description %(
+        This test verifies that Observation instances
+        found in the Results sections of the provided reports conform to the
+        [US Core Laboratory Result Observation profile](http://hl7.org/fhir/us/core/StructureDefinition/us-core-observation-lab|5.0.1).
+      )
+      
+
+      def resource_type
+        'Observation'
+      end
+
+      def scratch_resources
+        scratch[:observation_lab_resources] ||= {}
+      end
+
+      run do
+        perform_validation_test(scratch_resources[:all] || [],
+                                'http://hl7.org/fhir/us/core/StructureDefinition/us-core-observation-lab',
+                                '5.0.1',
+                                skip_if_empty: true)
+      end
+    end
+  end
+end

data/lib/cancer_registry_reporting_test_kit/hdea_suite/generated/v1.0.0/odh_usual_work/metadata.yml

@@ -0,0 +1,81 @@
+---
+:name: odh_UsualWork
+:class_name: OdhUsualworkSequence
+:version: v1.0.0
+:reformatted_version: v100
+:resource: Observation
+:profile_url: http://hl7.org/fhir/us/odh/StructureDefinition/odh-UsualWork
+:profile_name: Usual Work
+:profile_version: 1.1.0
+:title: Observation Usual Work
+:short_description: Verify support for the server capabilities required by the Usual
+  Work.
+:must_supports:
+  :extensions: []
+  :slices:
+  - :slice_id: Observation.value[x]:valueCodeableConcept.coding:occupationCDCCensus2010
+    :slice_name: occupationCDCCensus2010
+    :path: value[x].coding
+    :discriminator:
+      :type: requiredBinding
+      :path: ''
+      :values:
+      - :system: 2.16.840.1.114222.4.11.7186
+        :code: ''
+  - :slice_id: Observation.value[x]:valueCodeableConcept.coding:occupationONETSOCDetailODH
+    :slice_name: occupationONETSOCDetailODH
+    :path: value[x].coding
+    :discriminator:
+      :type: requiredBinding
+      :path: ''
+      :values: 
+      - :system: 2.16.840.1.114222.4.11.7901
+        :code: ''
+  - :slice_id: Observation.component:odh-UsualIndustry.value[x].coding:industryCDCCensus2010
+    :slice_name: industryCDCCensus2010
+    :path: component.value[x].coding
+    :discriminator:
+      :type: requiredBinding
+      :path: component.value[x]
+      :values: 
+      - :system: 2.16.840.1.114222.4.11.7187
+        :code: ''
+  - :slice_id: Observation.component:odh-UsualIndustry.value[x].coding:industryONETSOCDetailODH
+    :slice_name: industryONETSOCDetailODH
+    :path: component.value[x].coding
+    :discriminator:
+      :type: requiredBinding
+      :path: ''
+      :values: 
+      - :system: 2.16.840.1.114222.4.11.7900
+        :code: ''
+  - :slice_id: Observation.value[x]:valueCodeableConcept
+    :slice_name: valueCodeableConcept
+    :path: value[x]
+    :discriminator:
+      :type: type
+      :code: CodeableConcept
+  :elements:
+  - :path: component:odh-UsualIndustry.value[x].coding
+  - :path: value[x]:valueCodeableConcept.coding
+:mandatory_elements:
+- Observation.status
+- Observation.category.coding
+- Observation.category.coding.system
+- Observation.category.coding.code
+- Observation.code
+- Observation.code.coding
+- Observation.code.coding.system
+- Observation.code.coding.code
+- Observation.subject
+- Observation.effective[x]
+- Observation.value[x].coding
+- Observation.component
+- Observation.component.code
+- Observation.component.value[x].coding
+:tests:
+- :id: ccrr_v100_odh_usual_work_must_support_test
+  :file_name: odh_usual_work_must_support_test.rb
+- :id: ccrr_v100_odh_usual_work_validation_test
+  :file_name: odh_usual_work_validation_test.rb
+:id: ccrr_v100_odh_usual_work