cancer_registry_reporting_test_kit 0.9.0

data/lib/cancer_registry_reporting_test_kit/hdea_suite/generated/v1.0.0/mcode_radiotherapy_course_summary/mcode_radiotherapy_course_summary_must_support_test.rb

@@ -0,0 +1,52 @@
+# frozen_string_literal: true
+
+require_relative '../../../../must_support_test'
+require_relative '../../../../hdea_generator/group_metadata'
+
+module CancerRegistryReportingTestKit
+  module HDEAV100
+    class McodeRadiotherapyCourseSummaryMustSupportTest < Inferno::Test
+      include CancerRegistryReportingTestKit::MustSupportTest
+
+      title 'Radiotherapy Course Summary profile must support element coverage'
+      description %(
+        This test looks across all instances
+        associated with the [Radiotherapy Course Summary profile](http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-radiotherapy-course-summary|3.0.0)
+        found in the provided report Bundles and verifies that they
+        contain populated examples of the following must support elements
+        defined in the profile:
+
+        * Procedure.bodySite
+        * Procedure.code.coding.code
+        * Procedure.extension:actualNumberOfSessions
+        * Procedure.extension:doseDeliveredToVolume
+        * Procedure.extension:modalityAndTechnique
+        * Procedure.extension:terminationReason
+        * Procedure.extension:treatmentIntent
+        * Procedure.performed[x]
+        * Procedure.reasonCode
+        * Procedure.reasonReference
+        * Procedure.status
+        * Procedure.subject
+      )
+
+      id :ccrr_v100_mcode_radiotherapy_course_summary_must_support_test
+
+      def resource_type
+        'Procedure'
+      end
+
+      def self.metadata
+        @metadata ||= HdeaGenerator::GroupMetadata.new(YAML.load_file(File.join(__dir__, 'metadata.yml'), aliases: true))
+      end
+
+      def scratch_resources
+        scratch[:mcode_radiotherapy_course_summary_resources] ||= {}
+      end
+
+      run do
+        perform_must_support_test(all_scratch_resources)
+      end
+    end
+  end
+end

data/lib/cancer_registry_reporting_test_kit/hdea_suite/generated/v1.0.0/mcode_radiotherapy_course_summary/mcode_radiotherapy_course_summary_validation_test.rb

@@ -0,0 +1,35 @@
+# frozen_string_literal: true
+
+require_relative '../../../../validation_test'
+
+module CancerRegistryReportingTestKit
+  module HDEAV100
+    class McodeRadiotherapyCourseSummaryValidationTest < Inferno::Test
+      include CancerRegistryReportingTestKit::ValidationTest
+
+      id :ccrr_v100_mcode_radiotherapy_course_summary_validation_test
+      title 'Radiotherapy Course Summary profile conformance'
+      description %(
+        This test verifies that Procedure instances
+        found in the Radiotherapy Course Summary sections of the provided reports conform to the
+        [Radiotherapy Course Summary profile](http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-radiotherapy-course-summary|3.0.0).
+      )
+      
+
+      def resource_type
+        'Procedure'
+      end
+
+      def scratch_resources
+        scratch[:mcode_radiotherapy_course_summary_resources] ||= {}
+      end
+
+      run do
+        perform_validation_test(scratch_resources[:all] || [],
+                                'http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-radiotherapy-course-summary',
+                                '3.0.0',
+                                skip_if_empty: true)
+      end
+    end
+  end
+end

data/lib/cancer_registry_reporting_test_kit/hdea_suite/generated/v1.0.0/mcode_radiotherapy_course_summary/metadata.yml

@@ -0,0 +1,59 @@
+---
+:name: mcode_radiotherapy_course_summary
+:class_name: McodeRadiotherapyCourseSummarySequence
+:version: v1.0.0
+:reformatted_version: v100
+:resource: Procedure
+:profile_url: http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-radiotherapy-course-summary
+:profile_name: Radiotherapy Course Summary Profile
+:profile_version: 3.0.0
+:title: Procedure Radiotherapy Course Summary
+:short_description: Verify support for the server capabilities required by the Radiotherapy
+  Course Summary Profile.
+:must_supports:
+  :extensions:
+  - :id: Procedure.extension:treatmentIntent
+    :path: extension
+    :url: http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-procedure-intent
+  - :id: Procedure.extension:terminationReason
+    :path: extension
+    :url: http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-treatment-termination-reason
+  - :id: Procedure.extension:modalityAndTechnique
+    :path: extension
+    :url: http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-radiotherapy-modality-and-technique
+  - :id: Procedure.extension:actualNumberOfSessions
+    :path: extension
+    :url: http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-radiotherapy-sessions
+  - :id: Procedure.extension:doseDeliveredToVolume
+    :path: extension
+    :url: http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-radiotherapy-dose-delivered-to-volume
+  :slices: []
+  :elements:
+  - :path: status
+  - :path: code.coding.code
+    :fixed_value: '1217123003'
+  - :path: subject
+    :types:
+    - Reference
+    :target_profiles:
+    - http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-cancer-patient
+  - :path: performed[x]
+  - :path: reasonCode
+  - :path: reasonReference
+    :types:
+    - Reference
+    :target_profiles:
+    - http://hl7.org/fhir/us/core/StructureDefinition/us-core-condition-problems-health-concerns
+  - :path: bodySite
+:mandatory_elements:
+- Procedure.status
+- Procedure.code
+- Procedure.subject
+- Procedure.performer.actor
+- Procedure.focalDevice.manipulated
+:tests:
+- :id: ccrr_v100_mcode_radiotherapy_course_summary_must_support_test
+  :file_name: mcode_radiotherapy_course_summary_must_support_test.rb
+- :id: ccrr_v100_mcode_radiotherapy_course_summary_validation_test
+  :file_name: mcode_radiotherapy_course_summary_validation_test.rb
+:id: ccrr_v100_mcode_radiotherapy_course_summary

data/lib/cancer_registry_reporting_test_kit/hdea_suite/generated/v1.0.0/mcode_secondary_cancer_condition/mcode_secondary_cancer_condition_must_support_test.rb

@@ -0,0 +1,56 @@
+# frozen_string_literal: true
+
+require_relative '../../../../must_support_test'
+require_relative '../../../../hdea_generator/group_metadata'
+
+module CancerRegistryReportingTestKit
+  module HDEAV100
+    class McodeSecondaryCancerConditionMustSupportTest < Inferno::Test
+      include CancerRegistryReportingTestKit::MustSupportTest
+
+      title 'Secondary Cancer Condition profile must support element coverage'
+      description %(
+        This test looks across all instances
+        associated with the [Secondary Cancer Condition profile](http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-secondary-cancer-condition|3.0.0)
+        found in the provided report Bundles and verifies that they
+        contain populated examples of the following must support elements
+        defined in the profile:
+
+        * Condition.abatementDateTime
+        * Condition.bodySite
+        * Condition.bodySite.extension:lateralityQualifier
+        * Condition.bodySite.extension:locationQualifier
+        * Condition.category
+        * Condition.category:sdoh
+        * Condition.category:us-core
+        * Condition.clinicalStatus
+        * Condition.code
+        * Condition.extension:assertedDate
+        * Condition.extension:histologyMorphologyBehavior
+        * Condition.extension:relatedPrimaryCancerCondition
+        * Condition.onsetDateTime
+        * Condition.recordedDate
+        * Condition.subject
+        * Condition.verificationStatus
+      )
+
+      id :ccrr_v100_mcode_secondary_cancer_condition_must_support_test
+
+      def resource_type
+        'Condition'
+      end
+
+      def self.metadata
+        @metadata ||= HdeaGenerator::GroupMetadata.new(YAML.load_file(File.join(__dir__, 'metadata.yml'), aliases: true))
+      end
+
+      def scratch_resources
+        scratch[:mcode_secondary_cancer_condition_resources] ||= {}
+      end
+
+      run do
+        perform_must_support_test(all_scratch_resources)
+      end
+    end
+  end
+end

data/lib/cancer_registry_reporting_test_kit/hdea_suite/generated/v1.0.0/mcode_secondary_cancer_condition/mcode_secondary_cancer_condition_validation_test.rb

@@ -0,0 +1,35 @@
+# frozen_string_literal: true
+
+require_relative '../../../../validation_test'
+
+module CancerRegistryReportingTestKit
+  module HDEAV100
+    class McodeSecondaryCancerConditionValidationTest < Inferno::Test
+      include CancerRegistryReportingTestKit::ValidationTest
+
+      id :ccrr_v100_mcode_secondary_cancer_condition_validation_test
+      title 'Secondary Cancer Condition profile conformance'
+      description %(
+        This test verifies that Condition instances
+        found in the Secondary Cancer Condition sections of the provided reports conform to the
+        [Secondary Cancer Condition profile](http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-secondary-cancer-condition|3.0.0).
+      )
+      
+
+      def resource_type
+        'Condition'
+      end
+
+      def scratch_resources
+        scratch[:mcode_secondary_cancer_condition_resources] ||= {}
+      end
+
+      run do
+        perform_validation_test(scratch_resources[:all] || [],
+                                'http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-secondary-cancer-condition',
+                                '3.0.0',
+                                skip_if_empty: true)
+      end
+    end
+  end
+end

data/lib/cancer_registry_reporting_test_kit/hdea_suite/generated/v1.0.0/mcode_secondary_cancer_condition/metadata.yml

@@ -0,0 +1,77 @@
+---
+:name: mcode_secondary_cancer_condition
+:class_name: McodeSecondaryCancerConditionSequence
+:version: v1.0.0
+:reformatted_version: v100
+:resource: Condition
+:profile_url: http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-secondary-cancer-condition
+:profile_name: Secondary Cancer Condition Profile
+:profile_version: 3.0.0
+:title: Condition Secondary Cancer
+:short_description: Verify support for the server capabilities required by the Secondary
+  Cancer Condition Profile.
+:must_supports:
+  :extensions:
+  - :id: Condition.extension:assertedDate
+    :path: extension
+    :url: http://hl7.org/fhir/StructureDefinition/condition-assertedDate
+  - :id: Condition.extension:histologyMorphologyBehavior
+    :path: extension
+    :url: http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-histology-morphology-behavior
+  - :id: Condition.extension:relatedPrimaryCancerCondition
+    :path: extension
+    :url: http://hl7.org/fhir/StructureDefinition/condition-related
+  - :id: Condition.bodySite.extension:locationQualifier
+    :path: bodySite.extension
+    :url: http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-body-location-qualifier
+  - :id: Condition.bodySite.extension:lateralityQualifier
+    :path: bodySite.extension
+    :url: http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-laterality-qualifier
+  :slices:
+  - :slice_id: Condition.category:us-core
+    :slice_name: us-core
+    :path: category
+    :discriminator:
+      :type: requiredBinding
+      :path: ''
+      :values:
+      - :system: http://terminology.hl7.org/CodeSystem/condition-category
+        :code: problem-list-item
+      - :system: http://terminology.hl7.org/CodeSystem/condition-category
+        :code: encounter-diagnosis
+  - :slice_id: Condition.category:sdoh
+    :slice_name: sdoh
+    :path: category
+    :discriminator:
+      :type: patternCodeableConcept
+      :path: ''
+      :code: sdoh
+      :system: http://hl7.org/fhir/us/core/CodeSystem/us-core-tags
+  :elements:
+  - :path: clinicalStatus
+  - :path: verificationStatus
+  - :path: category
+  - :path: code
+  - :path: bodySite
+  - :path: subject
+    :types:
+    - Reference
+    :target_profiles:
+    - http://hl7.org/fhir/us/core/StructureDefinition/us-core-patient
+  - :path: onsetDateTime
+    :original_path: onset[x]
+  - :path: abatementDateTime
+    :original_path: abatement[x]
+  - :path: recordedDate
+:mandatory_elements:
+- Condition.extension.url
+- Condition.extension.value[x]
+- Condition.category
+- Condition.code
+- Condition.subject
+:tests:
+- :id: ccrr_v100_mcode_secondary_cancer_condition_must_support_test
+  :file_name: mcode_secondary_cancer_condition_must_support_test.rb
+- :id: ccrr_v100_mcode_secondary_cancer_condition_validation_test
+  :file_name: mcode_secondary_cancer_condition_validation_test.rb
+:id: ccrr_v100_mcode_secondary_cancer_condition

data/lib/cancer_registry_reporting_test_kit/hdea_suite/generated/v1.0.0/mcode_tnm_stage_group/mcode_tnm_stage_group_must_support_test.rb

@@ -0,0 +1,48 @@
+# frozen_string_literal: true
+
+require_relative '../../../../must_support_test'
+require_relative '../../../../hdea_generator/group_metadata'
+
+module CancerRegistryReportingTestKit
+  module HDEAV100
+    class McodeTnmStageGroupMustSupportTest < Inferno::Test
+      include CancerRegistryReportingTestKit::MustSupportTest
+
+      title 'TNM Stage Group profile must support element coverage'
+      description %(
+        This test looks across all instances
+        associated with the [TNM Stage Group profile](http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-tnm-stage-group|3.0.0)
+        found in the provided report Bundles and verifies that they
+        contain populated examples of the following must support elements
+        defined in the profile:
+
+        * Observation.code
+        * Observation.effective[x]
+        * Observation.focus
+        * Observation.hasMember
+        * Observation.method
+        * Observation.status
+        * Observation.subject
+        * Observation.value[x]
+      )
+
+      id :ccrr_v100_mcode_tnm_stage_group_must_support_test
+
+      def resource_type
+        'Observation'
+      end
+
+      def self.metadata
+        @metadata ||= HdeaGenerator::GroupMetadata.new(YAML.load_file(File.join(__dir__, 'metadata.yml'), aliases: true))
+      end
+
+      def scratch_resources
+        scratch[:mcode_tnm_stage_group_resources] ||= {}
+      end
+
+      run do
+        perform_must_support_test(all_scratch_resources)
+      end
+    end
+  end
+end

data/lib/cancer_registry_reporting_test_kit/hdea_suite/generated/v1.0.0/mcode_tnm_stage_group/mcode_tnm_stage_group_validation_test.rb

@@ -0,0 +1,35 @@
+# frozen_string_literal: true
+
+require_relative '../../../../validation_test'
+
+module CancerRegistryReportingTestKit
+  module HDEAV100
+    class McodeTnmStageGroupValidationTest < Inferno::Test
+      include CancerRegistryReportingTestKit::ValidationTest
+
+      id :ccrr_v100_mcode_tnm_stage_group_validation_test
+      title 'TNM Stage Group profile conformance'
+      description %(
+        This test verifies that Observation instances
+        found in the Cancer Stage Group sections of the provided reports conform to the
+        [TNM Stage Group profile](http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-tnm-stage-group|3.0.0).
+      )
+      
+
+      def resource_type
+        'Observation'
+      end
+
+      def scratch_resources
+        scratch[:mcode_tnm_stage_group_resources] ||= {}
+      end
+
+      run do
+        perform_validation_test(scratch_resources[:all] || [],
+                                'http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-tnm-stage-group',
+                                '3.0.0',
+                                skip_if_empty: true)
+      end
+    end
+  end
+end

data/lib/cancer_registry_reporting_test_kit/hdea_suite/generated/v1.0.0/mcode_tnm_stage_group/metadata.yml

@@ -0,0 +1,46 @@
+---
+:name: mcode_tnm_stage_group
+:class_name: McodeTnmStageGroupSequence
+:version: v1.0.0
+:reformatted_version: v100
+:resource: Observation
+:profile_url: http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-tnm-stage-group
+:profile_name: TNM Stage Group Profile
+:profile_version: 3.0.0
+:title: Observation TNM Stage Group
+:short_description: Verify support for the server capabilities required by the TNM
+  Stage Group Profile.
+:must_supports:
+  :extensions: []
+  :slices: []
+  :elements:
+  - :path: status
+  - :path: code
+  - :path: subject
+    :types:
+    - Reference
+    :target_profiles:
+    - http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-cancer-patient
+  - :path: focus
+    :types:
+    - Reference
+    :target_profiles:
+    - http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-primary-cancer-condition
+  - :path: effective[x]
+  - :path: value[x]
+  - :path: method
+  - :path: hasMember
+    :types:
+    - Reference
+:mandatory_elements:
+- Observation.status
+- Observation.code
+- Observation.focus
+- Observation.method
+- Observation.component.code
+:tests:
+- :id: ccrr_v100_mcode_tnm_stage_group_must_support_test
+  :file_name: mcode_tnm_stage_group_must_support_test.rb
+- :id: ccrr_v100_mcode_tnm_stage_group_validation_test
+  :file_name: mcode_tnm_stage_group_validation_test.rb
+:id: ccrr_v100_mcode_tnm_stage_group

data/lib/cancer_registry_reporting_test_kit/hdea_suite/generated/v1.0.0/medication/medication_must_support_test.rb

@@ -0,0 +1,41 @@
+# frozen_string_literal: true
+
+require_relative '../../../../must_support_test'
+require_relative '../../../../hdea_generator/group_metadata'
+
+module CancerRegistryReportingTestKit
+  module HDEAV100
+    class MedicationMustSupportTest < Inferno::Test
+      include CancerRegistryReportingTestKit::MustSupportTest
+
+      title 'US Core Medication profile must support element coverage'
+      description %(
+        This test looks across all instances
+        associated with the [US Core Medication profile](http://hl7.org/fhir/us/core/StructureDefinition/us-core-medication|5.0.1)
+        found in the provided report Bundles and verifies that they
+        contain populated examples of the following must support elements
+        defined in the profile:
+
+        * Medication.code
+      )
+
+      id :ccrr_v100_medication_must_support_test
+
+      def resource_type
+        'Medication'
+      end
+
+      def self.metadata
+        @metadata ||= HdeaGenerator::GroupMetadata.new(YAML.load_file(File.join(__dir__, 'metadata.yml'), aliases: true))
+      end
+
+      def scratch_resources
+        scratch[:medication_resources] ||= {}
+      end
+
+      run do
+        perform_must_support_test(all_scratch_resources)
+      end
+    end
+  end
+end

data/lib/cancer_registry_reporting_test_kit/hdea_suite/generated/v1.0.0/medication/medication_validation_test.rb

@@ -0,0 +1,35 @@
+# frozen_string_literal: true
+
+require_relative '../../../../validation_test'
+
+module CancerRegistryReportingTestKit
+  module HDEAV100
+    class MedicationValidationTest < Inferno::Test
+      include CancerRegistryReportingTestKit::ValidationTest
+
+      id :ccrr_v100_medication_validation_test
+      title 'US Core Medication profile conformance'
+      description %(
+        This test verifies that Medication instances
+        found in the Medications and Medications Administered sections of the provided reports conform to the
+        [US Core Medication profile](http://hl7.org/fhir/us/core/StructureDefinition/us-core-medication|5.0.1).
+      )
+      
+
+      def resource_type
+        'Medication'
+      end
+
+      def scratch_resources
+        scratch[:medication_resources] ||= {}
+      end
+
+      run do
+        perform_validation_test(scratch_resources[:all] || [],
+                                'http://hl7.org/fhir/us/core/StructureDefinition/us-core-medication',
+                                '5.0.1',
+                                skip_if_empty: false)
+      end
+    end
+  end
+end

data/lib/cancer_registry_reporting_test_kit/hdea_suite/generated/v1.0.0/medication/metadata.yml

@@ -0,0 +1,26 @@
+---
+:name: us_core_medication
+:class_name: UsCoreMedicationSequence
+:version: v1.0.0
+:reformatted_version: v100
+:resource: Medication
+:profile_url: http://hl7.org/fhir/us/core/StructureDefinition/us-core-medication
+:profile_name: US Core Medication Profile
+:profile_version: 5.0.1
+:title: US Core Medication
+:short_description: Verify support for the server capabilities required by the US
+  Core Medication Profile.
+:must_supports:
+  :extensions: []
+  :slices: []
+  :elements:
+  - :path: code
+:mandatory_elements:
+- Medication.code
+- Medication.ingredient.item[x]
+:tests:
+- :id: ccrr_v100_medication_must_support_test
+  :file_name: medication_must_support_test.rb
+- :id: ccrr_v100_medication_validation_test
+  :file_name: medication_validation_test.rb
+:id: ccrr_v100_medication

data/lib/cancer_registry_reporting_test_kit/hdea_suite/generated/v1.0.0/medication_administration/medication_administration_must_support_test.rb

@@ -0,0 +1,48 @@
+# frozen_string_literal: true
+
+require_relative '../../../../must_support_test'
+require_relative '../../../../hdea_generator/group_metadata'
+
+module CancerRegistryReportingTestKit
+  module HDEAV100
+    class MedicationAdministrationMustSupportTest < Inferno::Test
+      include CancerRegistryReportingTestKit::MustSupportTest
+
+      title 'Cancer-Related Medication Administration profile must support element coverage'
+      description %(
+        This test looks across all instances
+        associated with the [Cancer-Related Medication Administration profile](http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-cancer-related-medication-administration|3.0.0)
+        found in the provided report Bundles and verifies that they
+        contain populated examples of the following must support elements
+        defined in the profile:
+
+        * MedicationAdministration.effective[x]
+        * MedicationAdministration.extension:treatmentIntent
+        * MedicationAdministration.medication[x]
+        * MedicationAdministration.reasonCode
+        * MedicationAdministration.reasonReference
+        * MedicationAdministration.status
+        * MedicationAdministration.statusReason
+        * MedicationAdministration.subject
+      )
+
+      id :ccrr_v100_medication_administration_must_support_test
+
+      def resource_type
+        'MedicationAdministration'
+      end
+
+      def self.metadata
+        @metadata ||= HdeaGenerator::GroupMetadata.new(YAML.load_file(File.join(__dir__, 'metadata.yml'), aliases: true))
+      end
+
+      def scratch_resources
+        scratch[:medication_administration_resources] ||= {}
+      end
+
+      run do
+        perform_must_support_test(all_scratch_resources)
+      end
+    end
+  end
+end

data/lib/cancer_registry_reporting_test_kit/hdea_suite/generated/v1.0.0/medication_administration/medication_administration_validation_test.rb

@@ -0,0 +1,35 @@
+# frozen_string_literal: true
+
+require_relative '../../../../validation_test'
+
+module CancerRegistryReportingTestKit
+  module HDEAV100
+    class MedicationAdministrationValidationTest < Inferno::Test
+      include CancerRegistryReportingTestKit::ValidationTest
+
+      id :ccrr_v100_medication_administration_validation_test
+      title 'Cancer-Related Medication Administration profile conformance'
+      description %(
+        This test verifies that MedicationAdministration instances
+        found in the Medications and Medications Administered sections of the provided reports conform to the
+        [Cancer-Related Medication Administration profile](http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-cancer-related-medication-administration|3.0.0).
+      )
+      
+
+      def resource_type
+        'MedicationAdministration'
+      end
+
+      def scratch_resources
+        scratch[:medication_administration_resources] ||= {}
+      end
+
+      run do
+        perform_validation_test(scratch_resources[:all] || [],
+                                'http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-cancer-related-medication-administration',
+                                '3.0.0',
+                                skip_if_empty: true)
+      end
+    end
+  end
+end