bolognese 0.7.2 → 0.8

data/spec/datacite_json_spec.rb

@@ -0,0 +1,65 @@
+require 'spec_helper'
+
+describe Bolognese::DataciteJson, vcr: true do
+  let(:string) { IO.read(fixture_path + "datacite.json") }
+
+  subject { Bolognese::DataciteJson.new(string: string) }
+
+  context "get metadata as string" do
+    it "BlogPosting" do
+      expect(subject.id).to eq("https://doi.org/10.5438/4k3m-nyvg")
+      expect(subject.type).to eq("ScholarlyArticle")
+      expect(subject.additional_type).to eq("BlogPosting")
+      expect(subject.resource_type_general).to eq("Text")
+      expect(subject.author).to eq("type"=>"Person", "id"=>"http://orcid.org/0000-0003-1419-2405", "name"=>"Fenner, Martin", "givenName"=>"Martin", "familyName"=>"Fenner")
+      expect(subject.title).to eq("Eating your own Dog Food")
+      expect(subject.alternate_name).to eq("type"=>"Local accession number", "name"=>"MS-49-3632-5083")
+      expect(subject.date_published).to eq("2016-12-20")
+      expect(subject.is_part_of).to eq("id"=>"https://doi.org/10.5438/0000-00ss", "relationType"=>"IsPartOf")
+      expect(subject.references).to eq([{"id"=>"https://doi.org/10.5438/0012", "relationType"=>"References"}, {"id"=>"https://doi.org/10.5438/55e5-t5c0", "relationType"=>"References"}])
+      expect(subject.provider).to eq("DataCite")
+    end
+  end
+
+  context "get metadata as codemeta" do
+    it "SoftwareSourceCode" do
+      string = IO.read(fixture_path + "datacite_software.json")
+      subject = Bolognese::DataciteJson.new(string: string)
+      json = JSON.parse(subject.codemeta)
+      expect(json["@context"]).to eq("https://raw.githubusercontent.com/codemeta/codemeta/master/codemeta.jsonld")
+      expect(json["@id"]).to eq("https://doi.org/10.5063/f1m61h5x")
+      expect(json["@type"]).to eq("SoftwareSourceCode")
+      expect(json["identifier"]).to eq("https://doi.org/10.5063/f1m61h5x")
+      expect(json["agents"]).to eq("type"=>"Person", "name"=>"Matthew B. Jones", "givenName"=>"Matthew B.", "familyName"=>"Jones")
+      expect(json["title"]).to eq("dataone: R interface to the DataONE network of data repositories")
+      expect(json["datePublished"]).to eq("2016")
+      expect(json["publisher"]).to eq("KNB Data Repository")
+    end
+  end
+
+  context "get metadata as bibtex" do
+    it "Dataset" do
+      bibtex = BibTeX.parse(subject.bibtex).to_a(quotes: '').first
+      expect(bibtex[:bibtex_type].to_s).to eq("article")
+      expect(bibtex[:bibtex_key]).to eq("https://doi.org/10.5438/4k3m-nyvg")
+      expect(bibtex[:doi]).to eq("10.5438/4K3M-NYVG")
+      expect(bibtex[:title]).to eq("Eating your own Dog Food")
+      expect(bibtex[:author]).to eq("Fenner, Martin")
+      expect(bibtex[:publisher]).to eq("DataCite")
+      expect(bibtex[:year]).to eq("2016")
+    end
+
+    it "BlogPosting" do
+      id = "https://doi.org/10.5438/4K3M-NYVG"
+      subject = Bolognese::Datacite.new(id: id)
+      bibtex = BibTeX.parse(subject.bibtex).to_a(quotes: '').first
+      expect(bibtex[:bibtex_type].to_s).to eq("article")
+      expect(bibtex[:bibtex_key]).to eq("https://doi.org/10.5438/4k3m-nyvg")
+      expect(bibtex[:doi]).to eq("10.5438/4K3M-NYVG")
+      expect(bibtex[:title]).to eq("Eating your own Dog Food")
+      expect(bibtex[:author]).to eq("Fenner, Martin")
+      expect(bibtex[:publisher]).to eq("DataCite")
+      expect(bibtex[:year]).to eq("2016")
+    end
+  end
+end

data/spec/datacite_spec.rb

@@ -12,23 +12,16 @@ describe Bolognese::Datacite, vcr: true do
       expect(subject.type).to eq("Dataset")
       expect(subject.additional_type).to eq("DataPackage")
       expect(subject.resource_type_general).to eq("Dataset")
-      expect(subject.author).to eq([{"@type"=>"Person", "givenName"=>"Benjamin", "familyName"=>"Ollomo"},
-                                    {"@type"=>"Person", "givenName"=>"Patrick", "familyName"=>"Durand"},
-                                    {"@type"=>"Person", "givenName"=>"Franck", "familyName"=>"Prugnolle"},
-                                    {"@type"=>"Person", "givenName"=>"Emmanuel J. P.", "familyName"=>"Douzery"},
-                                    {"@type"=>"Person", "givenName"=>"Céline", "familyName"=>"Arnathau"},
-                                    {"@type"=>"Person", "givenName"=>"Dieudonné", "familyName"=>"Nkoghe"},
-                                    {"@type"=>"Person", "givenName"=>"Eric", "familyName"=>"Leroy"},
-                                    {"@type"=>"Person", "givenName"=>"François", "familyName"=>"Renaud"}])
-      expect(subject.name).to eq("Data from: A new malaria agent in African hominids.")
-      expect(subject.alternate_name).to eq("Ollomo B, Durand P, Prugnolle F, Douzery EJP, Arnathau C, Nkoghe D, Leroy E, Renaud F (2009) A new malaria agent in African hominids. PLoS Pathogens 5(5): e1000446.")
-      expect(subject.license).to eq("http://creativecommons.org/publicdomain/zero/1.0/")
+      expect(subject.author.length).to eq(8)
+      expect(subject.author.first).to eq("type"=>"Person", "name"=>"Benjamin Ollomo", "givenName"=>"Benjamin", "familyName"=>"Ollomo")
+      expect(subject.title).to eq("Data from: A new malaria agent in African hominids.")
+      expect(subject.alternate_name).to eq("type"=>"citation", "name"=>"Ollomo B, Durand P, Prugnolle F, Douzery EJP, Arnathau C, Nkoghe D, Leroy E, Renaud F (2009) A new malaria agent in African hominids. PLoS Pathogens 5(5): e1000446.")
+      expect(subject.license).to eq("url"=>"http://creativecommons.org/publicdomain/zero/1.0/")
       expect(subject.date_published).to eq("2011")
-      expect(subject.has_part).to eq([{"@type"=>"CreativeWork", "@id"=>"https://doi.org/10.5061/dryad.8515/1"},
-                                      {"@type"=>"CreativeWork", "@id"=>"https://doi.org/10.5061/dryad.8515/2"}])
-      expect(subject.citation).to eq("@type"=>"CreativeWork", "@id"=>"https://doi.org/10.1371/journal.ppat.1000446")
-      expect(subject.publisher).to eq("@type"=>"Organization", "name"=>"Dryad Digital Repository")
-      expect(subject.provider).to eq("@type"=>"Organization", "name"=>"DataCite")
+      expect(subject.has_part).to eq([{"id"=>"https://doi.org/10.5061/dryad.8515/1", "relationType"=>"HasPart"}, {"id"=>"https://doi.org/10.5061/dryad.8515/2", "relationType"=>"HasPart"}])
+      expect(subject.references).to eq("id"=>"https://doi.org/10.1371/journal.ppat.1000446", "relationType"=>"IsReferencedBy")
+      expect(subject.publisher).to eq("Dryad Digital Repository")
+      expect(subject.provider).to eq("DataCite")
       expect(subject.schema_version).to eq("http://datacite.org/schema/kernel-3")
     end
 
@@ -40,17 +33,16 @@ describe Bolognese::Datacite, vcr: true do
       expect(subject.type).to eq("ScholarlyArticle")
       expect(subject.additional_type).to eq("BlogPosting")
       expect(subject.resource_type_general).to eq("Text")
-      expect(subject.author).to eq("@type"=>"Person", "@id"=>"http://orcid.org/0000-0003-1419-2405", "givenName"=>"Martin", "familyName"=>"Fenner")
-      expect(subject.name).to eq("Eating your own Dog Food")
-      expect(subject.alternate_name).to eq("MS-49-3632-5083")
-      expect(subject.description).to start_with("Eating your own dog food")
+      expect(subject.author).to eq("type"=>"Person", "id"=>"http://orcid.org/0000-0003-1419-2405", "name"=>"Fenner, Martin", "givenName"=>"Martin", "familyName"=>"Fenner")
+      expect(subject.title).to eq("Eating your own Dog Food")
+      expect(subject.alternate_name).to eq("type"=>"Local accession number", "name"=>"MS-49-3632-5083")
+      expect(subject.description["text"]).to start_with("Eating your own dog food")
       expect(subject.date_published).to eq("2016-12-20")
       expect(subject.date_modified).to eq("2016-12-20")
-      expect(subject.is_part_of).to eq("@type"=>"CreativeWork", "@id"=>"https://doi.org/10.5438/0000-00ss")
-      expect(subject.citation).to eq([{"@type"=>"CreativeWork", "@id"=>"https://doi.org/10.5438/0012"},
-                                      {"@type"=>"CreativeWork", "@id"=>"https://doi.org/10.5438/55e5-t5c0"}])
-      expect(subject.publisher).to eq("@type"=>"Organization", "name"=>"DataCite")
-      expect(subject.provider).to eq("@type"=>"Organization", "name"=>"DataCite")
+      expect(subject.is_part_of).to eq("id"=>"https://doi.org/10.5438/0000-00ss", "relationType"=>"IsPartOf")
+      expect(subject.references).to eq([{"id"=>"https://doi.org/10.5438/0012", "relationType"=>"References"}, {"id"=>"https://doi.org/10.5438/55e5-t5c0", "relationType"=>"References"}])
+      expect(subject.publisher).to eq("DataCite")
+      expect(subject.provider).to eq("DataCite")
       expect(subject.schema_version).to eq("http://datacite.org/schema/kernel-4")
     end
 
@@ -62,12 +54,12 @@ describe Bolognese::Datacite, vcr: true do
       expect(subject.type).to eq("ScholarlyArticle")
       expect(subject.additional_type).to eq("ConferencePaper")
       expect(subject.resource_type_general).to eq("Text")
-      expect(subject.author).to eq("@type"=>"Person", "givenName"=>"Nathaniel", "familyName"=>"Johnston")
-      expect(subject.name).to eq("The Minimum Size of Qubit Unextendible Product Bases")
-      expect(subject.description).to start_with("\n\tWe investigate the problem of constructing unextendible product bases in the qubit case")
+      expect(subject.author).to eq("type"=>"Person", "name"=>"Nathaniel Johnston", "givenName"=>"Nathaniel", "familyName"=>"Johnston")
+      expect(subject.title).to eq("The Minimum Size of Qubit Unextendible Product Bases")
+      expect(subject.description["text"]).to start_with("We investigate the problem of constructing unextendible product bases in the qubit case")
       expect(subject.date_published).to eq("2013")
-      expect(subject.publisher).to eq("@type"=>"Organization", "name"=>"Schloss Dagstuhl - Leibniz-Zentrum fuer Informatik GmbH, Wadern/Saarbruecken, Germany")
-      expect(subject.provider).to eq("@type"=>"Organization", "name"=>"DataCite")
+      expect(subject.publisher).to eq("Schloss Dagstuhl - Leibniz-Zentrum fuer Informatik GmbH, Wadern/Saarbruecken, Germany")
+      expect(subject.provider).to eq("DataCite")
       expect(subject.schema_version).to eq("http://datacite.org/schema/kernel-2.1")
     end
 
@@ -79,14 +71,14 @@ describe Bolognese::Datacite, vcr: true do
       expect(subject.type).to eq("SoftwareSourceCode")
       expect(subject.additional_type).to eq("Software")
       expect(subject.resource_type_general).to eq("Software")
-      expect(subject.author).to eq("@type"=>"Agent", "name"=>"Kristian Garza")
-      expect(subject.name).to eq("Analysis Tools for Crossover Experiment of UI using Choice Architecture")
-      expect(subject.description).to start_with("<p>&nbsp;</p>\n\n<p>This tools are used to analyse the data produced by the Crosssover Experiment")
-      expect(subject.license).to eq(["info:eu-repo/semantics/openAccess", "https://creativecommons.org/licenses/by-nc-sa/4.0/"])
+      expect(subject.author).to eq("type"=>"Person", "name"=>"Kristian Garza", "givenName"=>"Kristian", "familyName"=>"Garza")
+      expect(subject.title).to eq("Analysis Tools for Crossover Experiment of UI using Choice Architecture")
+      expect(subject.description["text"]).to start_with("This tools are used to analyse the data produced by the Crosssover Experiment")
+      expect(subject.license).to eq([{"url"=>"info:eu-repo/semantics/openAccess", "name"=>"Open Access"}, {"url"=>"https://creativecommons.org/licenses/by-nc-sa/4.0/", "name"=>"Creative Commons Attribution-NonCommercial-ShareAlike"}])
       expect(subject.date_published).to eq("2016-03-27")
-      expect(subject.citation).to eq("@type"=>"CreativeWork", "@id"=>"https://github.com/kjgarza/frame_experiment_analysis/tree/v1.0")
-      expect(subject.publisher).to eq("@type"=>"Organization", "name"=>"Zenodo")
-      expect(subject.provider).to eq("@type"=>"Organization", "name"=>"DataCite")
+      expect(subject.references).to eq("id"=>"https://github.com/kjgarza/frame_experiment_analysis/tree/v1.0", "relationType"=>"IsSupplementTo")
+      expect(subject.publisher).to eq("Zenodo")
+      expect(subject.provider).to eq("DataCite")
       expect(subject.schema_version).to eq("http://datacite.org/schema/kernel-3")
     end
 
@@ -99,14 +91,14 @@ describe Bolognese::Datacite, vcr: true do
       expect(subject.additional_type).to eq("Dataset")
       expect(subject.resource_type_general).to eq("Dataset")
       expect(subject.author.count).to eq(11)
-      expect(subject.author.first).to eq("@type"=>"Agent", "@id"=>"http://orcid.org/0000-0002-2410-9671", "name"=>"Alexander Junge")
-      expect(subject.name).to eq("RAIN v1")
-      expect(subject.description).to start_with("<div><b>RAIN: RNA–protein Association and Interaction Networks")
-      expect(subject.license).to eq("https://creativecommons.org/licenses/by/4.0/")
+      expect(subject.author.first).to eq("type"=>"Person", "id"=>"http://orcid.org/0000-0002-2410-9671", "name"=>"Alexander Junge", "givenName"=>"Alexander", "familyName"=>"Junge")
+      expect(subject.title).to eq("RAIN v1")
+      expect(subject.description["text"]).to start_with("<b>RAIN: RNA–protein Association and Interaction Networks")
+      expect(subject.license).to eq("url"=>"https://creativecommons.org/licenses/by/4.0/", "name"=>"CC-BY")
       expect(subject.date_published).to eq("2016")
-      expect(subject.same_as).to eq("@type"=>"CreativeWork", "@id"=>"https://doi.org/10.6084/m9.figshare.4234751")
-      expect(subject.publisher).to eq("@type"=>"Organization", "name"=>"Figshare")
-      expect(subject.provider).to eq("@type"=>"Organization", "name"=>"DataCite")
+      expect(subject.is_identical_to).to eq("id"=>"https://doi.org/10.6084/m9.figshare.4234751", "relationType"=>"IsIdenticalTo")
+      expect(subject.publisher).to eq("Figshare")
+      expect(subject.provider).to eq("DataCite")
       expect(subject.schema_version).to eq("http://datacite.org/schema/kernel-3")
     end
 
@@ -118,16 +110,14 @@ describe Bolognese::Datacite, vcr: true do
       expect(subject.type).to eq("Dataset")
       expect(subject.additional_type).to eq("Dataset")
       expect(subject.resource_type_general).to eq("Dataset")
-      expect(subject.author).to eq([{"@type"=>"Person", "givenName"=>"Najko", "familyName"=>"Jahn"},
-                                    {"@type"=>"Person", "givenName"=>"Martin", "familyName"=>"Fenner"},
-                                    {"@type"=>"Person", "givenName"=>"Harry", "familyName"=>"Dimitropoulos"},
-                                    {"@type"=>"Person", "givenName"=>"Jochen", "familyName"=>"Schirrwagen"}])
-      expect(subject.name).to eq("Publication FP7 Funding Acknowledgment - PLOS OpenAIRE")
-      expect(subject.description).to start_with("The dataset contains a sample of metadata describing papers")
+      expect(subject.author.length).to eq(4)
+      expect(subject.author.first).to eq("type"=>"Person", "name"=>"Najko Jahn", "givenName"=>"Najko", "familyName"=>"Jahn")
+      expect(subject.title).to eq("Publication FP7 Funding Acknowledgment - PLOS OpenAIRE")
+      expect(subject.description["text"]).to start_with("The dataset contains a sample of metadata describing papers")
       expect(subject.date_published).to eq("2013-04-03")
-      expect(subject.publisher).to eq("@type"=>"Organization", "name"=>"OpenAIRE Orphan Record Repository")
-      expect(subject.funder).to eq("@type"=>"Organization", "name"=>"European Commission")
-      expect(subject.provider).to eq("@type"=>"Organization", "name"=>"DataCite")
+      expect(subject.publisher).to eq("OpenAIRE Orphan Record Repository")
+      expect(subject.funder).to eq("name" => "European Commission")
+      expect(subject.provider).to eq("DataCite")
       expect(subject.schema_version).to eq("http://datacite.org/schema/kernel-3")
     end
 
@@ -140,13 +130,13 @@ describe Bolognese::Datacite, vcr: true do
       expect(subject.additional_type).to eq("Project")
       expect(subject.resource_type_general).to eq("Collection")
       expect(subject.author.length).to eq(24)
-      expect(subject.author.first).to eq("@type"=>"Person", "@id"=>"http://orcid.org/0000-0001-5331-6592", "givenName"=>"Adam", "familyName"=>"Farquhar")
-      expect(subject.name).to eq("Technical and Human Infrastructure for Open Research (THOR)")
-      expect(subject.description).to start_with("\n<p>Five years ago, a global infrastructure")
+      expect(subject.author.first).to eq("type"=>"Person", "id"=>"http://orcid.org/0000-0001-5331-6592", "name"=>"Farquhar, Adam", "givenName"=>"Adam", "familyName"=>"Farquhar")
+      expect(subject.title).to eq("Technical and Human Infrastructure for Open Research (THOR)")
+      expect(subject.description["text"]).to start_with("Five years ago, a global infrastructure")
       expect(subject.date_published).to eq("2015")
-      expect(subject.publisher).to eq("@type"=>"Organization", "name"=>"DataCite")
-      expect(subject.funder).to eq("@type"=>"Organization", "@id"=>"https://doi.org/10.13039/501100000780", "name"=>"European Commission")
-      expect(subject.provider).to eq("@type"=>"Organization", "name"=>"DataCite")
+      expect(subject.publisher).to eq("DataCite")
+      expect(subject.funder).to eq("identifier"=>"https://doi.org/10.13039/501100000780", "name"=>"European Commission")
+      expect(subject.provider).to eq("DataCite")
       expect(subject.schema_version).to eq("http://datacite.org/schema/kernel-4")
 
       datacite = Maremma.from_xml(subject.datacite).fetch("resource", {})
@@ -171,13 +161,13 @@ describe Bolognese::Datacite, vcr: true do
       expect(subject.type).to eq("ScholarlyArticle")
       expect(subject.additional_type).to eq("BlogPosting")
       expect(subject.resource_type_general).to eq("Text")
-      expect(subject.author).to eq("@type"=>"Person", "@id"=>"http://orcid.org/0000-0003-1419-2405", "givenName"=>"Martin", "familyName"=>"Fenner")
-      expect(subject.name).to eq("Eating your own Dog Food")
-      expect(subject.alternate_name).to eq("MS-49-3632-5083")
+      expect(subject.author).to eq("type"=>"Person", "id"=>"http://orcid.org/0000-0003-1419-2405", "name"=>"Fenner, Martin", "givenName"=>"Martin", "familyName"=>"Fenner")
+      expect(subject.title).to eq("Eating your own Dog Food")
+      expect(subject.alternate_name).to eq("type"=>"Local accession number", "name"=>"MS-49-3632-5083")
       expect(subject.date_published).to eq("2016-12-20")
-      expect(subject.is_part_of).to eq("@type"=>"CreativeWork", "@id"=>"https://doi.org/10.5438/0000-00ss")
-      expect(subject.citation).to eq([{"@type"=>"CreativeWork", "@id"=>"https://doi.org/10.5438/0012"}, {"@type"=>"CreativeWork", "@id"=>"https://doi.org/10.5438/55e5-t5c0"}])
-      expect(subject.provider).to eq("@type"=>"Organization", "name"=>"DataCite")
+      expect(subject.is_part_of).to eq("id"=>"https://doi.org/10.5438/0000-00ss", "relationType"=>"IsPartOf")
+      expect(subject.references).to eq([{"id"=>"https://doi.org/10.5438/0012", "relationType"=>"References"}, {"id"=>"https://doi.org/10.5438/55e5-t5c0", "relationType"=>"References"}])
+      expect(subject.provider).to eq("DataCite")
     end
 
     it "missing creator" do
@@ -198,23 +188,17 @@ describe Bolognese::Datacite, vcr: true do
       expect(subject.type).to eq("Dataset")
       expect(subject.additional_type).to eq("DataPackage")
       expect(subject.resource_type_general).to eq("Dataset")
-      expect(subject.author).to eq([{"@type"=>"Person", "givenName"=>"Benjamin", "familyName"=>"Ollomo"},
-                                    {"@type"=>"Person", "givenName"=>"Patrick", "familyName"=>"Durand"},
-                                    {"@type"=>"Person", "givenName"=>"Franck", "familyName"=>"Prugnolle"},
-                                    {"@type"=>"Person", "givenName"=>"Emmanuel J. P.", "familyName"=>"Douzery"},
-                                    {"@type"=>"Person", "givenName"=>"Céline", "familyName"=>"Arnathau"},
-                                    {"@type"=>"Person", "givenName"=>"Dieudonné", "familyName"=>"Nkoghe"},
-                                    {"@type"=>"Person", "givenName"=>"Eric", "familyName"=>"Leroy"},
-                                    {"@type"=>"Person", "givenName"=>"François", "familyName"=>"Renaud"}])
-      expect(subject.name).to eq("Data from: A new malaria agent in African hominids.")
-      expect(subject.alternate_name).to eq("Ollomo B, Durand P, Prugnolle F, Douzery EJP, Arnathau C, Nkoghe D, Leroy E, Renaud F (2009) A new malaria agent in African hominids. PLoS Pathogens 5(5): e1000446.")
-      expect(subject.license).to eq("http://creativecommons.org/publicdomain/zero/1.0/")
+      expect(subject.author.length).to eq(8)
+      expect(subject.author.first).to eq("type"=>"Person", "name"=>"Benjamin Ollomo", "givenName"=>"Benjamin", "familyName"=>"Ollomo")
+      expect(subject.title).to eq("Data from: A new malaria agent in African hominids.")
+      expect(subject.alternate_name).to eq("type"=>"citation", "name"=>"Ollomo B, Durand P, Prugnolle F, Douzery EJP, Arnathau C, Nkoghe D, Leroy E, Renaud F (2009) A new malaria agent in African hominids. PLoS Pathogens 5(5): e1000446.")
+      expect(subject.license).to eq("url"=>"http://creativecommons.org/publicdomain/zero/1.0/")
       expect(subject.date_published).to eq("2011")
-      expect(subject.has_part).to eq([{"@type"=>"CreativeWork", "@id"=>"https://doi.org/10.5061/dryad.8515/1"},
-                                      {"@type"=>"CreativeWork", "@id"=>"https://doi.org/10.5061/dryad.8515/2"}])
-      expect(subject.citation).to eq("@type"=>"CreativeWork", "@id"=>"https://doi.org/10.1371/journal.ppat.1000446")
-      expect(subject.publisher).to eq("@type"=>"Organization", "name"=>"Dryad Digital Repository")
-      expect(subject.provider).to eq("@type"=>"Organization", "name"=>"DataCite")
+      expect(subject.has_part).to eq([{"id"=>"https://doi.org/10.5061/dryad.8515/1", "relationType"=>"HasPart"},
+                                      {"id"=>"https://doi.org/10.5061/dryad.8515/2", "relationType"=>"HasPart"}])
+      expect(subject.references).to eq("id"=>"https://doi.org/10.1371/journal.ppat.1000446", "relationType"=>"IsReferencedBy")
+      expect(subject.publisher).to eq("Dryad Digital Repository")
+      expect(subject.provider).to eq("DataCite")
       expect(subject.schema_version).to eq("http://datacite.org/schema/kernel-3")
 
       datacite = Maremma.from_xml(subject.datacite).fetch("resource", {})
@@ -232,10 +216,10 @@ describe Bolognese::Datacite, vcr: true do
       expect(json["@id"]).to eq("https://doi.org/10.5063/f1m61h5x")
       expect(json["@type"]).to eq("SoftwareSourceCode")
       expect(json["identifier"]).to eq("https://doi.org/10.5063/f1m61h5x")
-      expect(json["agents"]).to eq("@type"=>"Person", "givenName"=>"Matthew B.", "familyName"=>"Jones")
+      expect(json["agents"]).to eq("type"=>"Person", "name"=>"Matthew B. Jones", "givenName"=>"Matthew B.", "familyName"=>"Jones")
       expect(json["title"]).to eq("dataone: R interface to the DataONE network of data repositories")
       expect(json["datePublished"]).to eq("2016")
-      expect(json["publisher"]).to eq("@type"=>"Organization", "name"=>"KNB Data Repository")
+      expect(json["publisher"]).to eq("KNB Data Repository")
     end
   end
 

data/spec/datacite_utils_spec.rb

@@ -17,7 +17,7 @@ describe Bolognese::Datacite, vcr: true do
     it "insert" do
       xml = Nokogiri::XML::Builder.new { |xml| subject.insert_creators(xml) }.to_xml
       response = Maremma.from_xml(xml)
-      expect(response.dig("creators", "creator").first).to eq("creatorName"=>"Ollomo, Benjamin", "givenName"=>"Benjamin", "familyName"=>"Ollomo")
+      expect(response.dig("creators", "creator").first).to eq("creatorName"=>"Benjamin Ollomo", "givenName"=>"Benjamin", "familyName"=>"Ollomo")
     end
   end
 
@@ -83,7 +83,7 @@ describe Bolognese::Datacite, vcr: true do
     it "insert" do
       xml = Nokogiri::XML::Builder.new { |xml| subject.insert_alternate_identifiers(xml) }.to_xml
       response = Maremma.from_xml(xml)
-      expect(response.dig("alternateIdentifiers", "alternateIdentifier")).to eq("alternateIdentifierType"=>"Local accession number", "__content__"=>"Ollomo B, Durand P, Prugnolle F, Douzery EJP, Arnathau C, Nkoghe D, Leroy E, Renaud F (2009) A new malaria agent in African hominids. PLoS Pathogens 5(5): e1000446.")
+      expect(response.dig("alternateIdentifiers", "alternateIdentifier")).to eq("alternateIdentifierType"=>"citation", "__content__"=>"Ollomo B, Durand P, Prugnolle F, Douzery EJP, Arnathau C, Nkoghe D, Leroy E, Renaud F (2009) A new malaria agent in African hominids. PLoS Pathogens 5(5): e1000446.")
     end
   end
 
@@ -112,16 +112,11 @@ describe Bolognese::Datacite, vcr: true do
   end
 
   context "insert_related_identifiers" do
-    it "rel_identifiers" do
-      expect(subject.rel_identifiers).to eq([{"__content__"=>"https://doi.org/10.5061/dryad.8515/1",
-                                              "related_identifier_type"=>"DOI",
-                                              "relation_type"=>"HasPart"},
-                                             {"__content__"=>"https://doi.org/10.5061/dryad.8515/2",
-                                              "related_identifier_type"=>"DOI",
-                                              "relation_type"=>"HasPart"},
-                                             {"__content__"=>"https://doi.org/10.1371/journal.ppat.1000446",
-                                              "related_identifier_type"=>"DOI",
-                                              "relation_type"=>"References"}])
+    it "related_identifier" do
+      expect(subject.related_identifier).to eq([{"id"=>"https://doi.org/10.5061/dryad.8515/1", "relationType"=>"HasPart"},
+                                                {"id"=>"https://doi.org/10.5061/dryad.8515/2", "relationType"=>"HasPart"},
+                                                {"id"=>"https://doi.org/10.1371/journal.ppat.1000446",
+                                                 "relationType"=>"IsReferencedBy"}])
     end
 
     it "insert" do
@@ -134,7 +129,7 @@ describe Bolognese::Datacite, vcr: true do
                                                                               "relationType"=>"HasPart",
                                                                               "__content__"=>"https://doi.org/10.5061/dryad.8515/2"},
                                                                              {"relatedIdentifierType"=>"DOI",
-                                                                              "relationType"=>"References",
+                                                                              "relationType"=>"IsReferencedBy",
                                                                               "__content__"=>"https://doi.org/10.1371/journal.ppat.1000446"}])
     end
   end
@@ -143,7 +138,7 @@ describe Bolognese::Datacite, vcr: true do
     it "insert" do
       xml = Nokogiri::XML::Builder.new { |xml| subject.insert_rights_list(xml) }.to_xml
       response = Maremma.from_xml(xml)
-      expect(response.dig("rightsList", "rights")).to eq("rightsURI"=>"http://creativecommons.org/publicdomain/zero/1.0/", "__content__"=>"Public Domain (CC0 1.0)")
+      expect(response.dig("rightsList", "rights")).to eq("rightsURI"=>"http://creativecommons.org/publicdomain/zero/1.0/")
     end
   end
 

data/spec/fixtures/datacite.json

@@ -0,0 +1,49 @@
+{
+  "id": "https://doi.org/10.5438/4k3m-nyvg",
+  "doi": "10.5438/4K3M-NYVG",
+  "creator": {
+    "type": "Person",
+    "id": "http://orcid.org/0000-0003-1419-2405",
+    "name": "Fenner, Martin",
+    "givenName": "Martin",
+    "familyName": "Fenner"
+  },
+  "title": "Eating your own Dog Food",
+  "publisher": "DataCite",
+  "publication-year": "2016",
+  "resource-type-general": "Text",
+  "resource-type": "BlogPosting",
+  "subject": [
+    "datacite",
+    "doi",
+    "metadata"
+  ],
+  "date-created": "2016-12-20",
+  "date-published": "2016-12-20",
+  "date-modified": "2016-12-20",
+  "alternate-identifier": {
+    "type": "Local accession number",
+    "name": "MS-49-3632-5083"
+  },
+  "related_identifier": [
+    {
+      "id": "https://doi.org/10.5438/0012",
+      "relationType": "References"
+    },
+    {
+      "id": "https://doi.org/10.5438/55e5-t5c0",
+      "relationType": "References"
+    },
+    {
+      "id": "https://doi.org/10.5438/0000-00ss",
+      "relationType": "IsPartOf"
+    }
+  ],
+  "version": "1.0",
+  "description": {
+    "type": "Abstract",
+    "text": "Eating your own dog food is a slang term to describe that an organization should itself use the products and services it provides. For DataCite this means that we should use DOIs with appropriate metadata and strategies for long-term preservation for..."
+  },
+  "schemaVersion": "http://datacite.org/schema/kernel-4",
+  "provider": "DataCite"
+}

data/spec/fixtures/datacite_software.json

@@ -0,0 +1,18 @@
+{
+  "id": "https://doi.org/10.5063/f1m61h5x",
+  "doi": "10.5063/F1M61H5X",
+  "creator": {
+    "type": "Person",
+    "name": "Matthew B. Jones",
+    "givenName": "Matthew B.",
+    "familyName": "Jones"
+  },
+  "title": "dataone: R interface to the DataONE network of data repositories",
+  "publisher": "KNB Data Repository",
+  "publication-year": "2016",
+  "resource-type-general": "Software",
+  "resource-type": "Software",
+  "date-published": "2016",
+  "schemaVersion": "http://datacite.org/schema/kernel-3",
+  "provider": "DataCite"
+}

data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/datacite/to_datacite_json.yml

@@ -0,0 +1,214 @@
+---
+http_interactions:
+- request:
+    method: get
+    uri: https://doi.crossref.org/doiRA/10.5061/dryad.8515
+    body:
+      encoding: US-ASCII
+      string: ''
+    headers:
+      User-Agent:
+      - Maremma - https://github.com/datacite/maremma
+      Accept:
+      - text/html,application/json,application/xml;q=0.9, text/plain;q=0.8,image/png,*/*;q=0.5
+  response:
+    status:
+      code: 200
+      message: ''
+    headers:
+      Server:
+      - Apache-Coyote/1.1
+      Crossref-Deployment-Name:
+      - svc1-1
+      Content-Type:
+      - application/json;charset=UTF-8
+      Content-Language:
+      - en-US
+      Content-Length:
+      - '56'
+      Date:
+      - Mon, 27 Feb 2017 20:46:45 GMT
+      Connection:
+      - close
+    body:
+      encoding: UTF-8
+      string: |-
+        [
+         {
+         "DOI": "10.5061/dryad.8515",
+         "RA": "DataCite"
+        }
+        ]
+    http_version: 
+  recorded_at: Mon, 27 Feb 2017 20:46:46 GMT
+- request:
+    method: get
+    uri: https://doi.org/10.5061/dryad.8515
+    body:
+      encoding: US-ASCII
+      string: ''
+    headers:
+      User-Agent:
+      - Maremma - https://github.com/datacite/maremma
+      Accept:
+      - application/vnd.datacite.datacite+xml
+  response:
+    status:
+      code: 303
+      message: ''
+    headers:
+      Server:
+      - Apache-Coyote/1.1
+      Vary:
+      - Accept
+      Location:
+      - http://data.datacite.org/10.5061%2Fdryad.8515
+      Expires:
+      - Mon, 27 Feb 2017 21:33:17 GMT
+      Content-Type:
+      - text/html;charset=utf-8
+      Content-Length:
+      - '175'
+      Date:
+      - Mon, 27 Feb 2017 20:46:54 GMT
+    body:
+      encoding: UTF-8
+      string: |-
+        <html><head><title>Handle Redirect</title></head>
+        <body><a href="http://data.datacite.org/10.5061%2Fdryad.8515">http://data.datacite.org/10.5061%2Fdryad.8515</a></body></html>
+    http_version: 
+  recorded_at: Mon, 27 Feb 2017 20:46:54 GMT
+- request:
+    method: get
+    uri: http://data.datacite.org/10.5061%2Fdryad.8515
+    body:
+      encoding: US-ASCII
+      string: ''
+    headers:
+      User-Agent:
+      - Maremma - https://github.com/datacite/maremma
+      Accept:
+      - application/vnd.datacite.datacite+xml
+  response:
+    status:
+      code: 301
+      message: ''
+    headers:
+      Server:
+      - openresty/1.11.2.2
+      Date:
+      - Mon, 27 Feb 2017 20:46:54 GMT
+      Content-Type:
+      - text/html
+      Content-Length:
+      - '191'
+      Connection:
+      - keep-alive
+      Location:
+      - https://data.datacite.org/10.5061%2Fdryad.8515
+    body:
+      encoding: UTF-8
+      string: "<html>\r\n<head><title>301 Moved Permanently</title></head>\r\n<body
+        bgcolor=\"white\">\r\n<center><h1>301 Moved Permanently</h1></center>\r\n<hr><center>openresty/1.11.2.2</center>\r\n</body>\r\n</html>\r\n"
+    http_version: 
+  recorded_at: Mon, 27 Feb 2017 20:46:54 GMT
+- request:
+    method: get
+    uri: https://data.datacite.org/10.5061%2Fdryad.8515
+    body:
+      encoding: US-ASCII
+      string: ''
+    headers:
+      User-Agent:
+      - Maremma - https://github.com/datacite/maremma
+      Accept:
+      - application/vnd.datacite.datacite+xml
+  response:
+    status:
+      code: 200
+      message: ''
+    headers:
+      Server:
+      - openresty/1.11.2.2
+      Date:
+      - Mon, 27 Feb 2017 20:46:55 GMT
+      Content-Type:
+      - application/vnd.datacite.datacite+xml
+      Content-Length:
+      - '2601'
+      Connection:
+      - keep-alive
+      Cache-Control:
+      - no-transform, max-age=3600
+      Last-Modified:
+      - Sat, 04 Feb 2017 17:54:37 GMT
+      Vary:
+      - Accept
+      Access-Control-Allow-Origin:
+      - "*"
+      Access-Control-Allow-Methods:
+      - GET, POST, OPTIONS
+    body:
+      encoding: ASCII-8BIT
+      string: !binary |-
+        PD94bWwgdmVyc2lvbj0iMS4wIiBlbmNvZGluZz0iVVRGLTgiPz4KPHJlc291
+        cmNlIHhtbG5zPSJodHRwOi8vZGF0YWNpdGUub3JnL3NjaGVtYS9rZXJuZWwt
+        MyIgeG1sbnM6eHNpPSJodHRwOi8vd3d3LnczLm9yZy8yMDAxL1hNTFNjaGVt
+        YS1pbnN0YW5jZSIgeG1sbnM6bWV0cz0iaHR0cDovL3d3dy5sb2MuZ292L01F
+        VFMvIiB4bWxuczpkc3BhY2U9Imh0dHA6Ly93d3cuZHNwYWNlLm9yZy94bWxu
+        cy9kc3BhY2UvZGltIiB4bWxuczpkaW09Imh0dHA6Ly93d3cuZHNwYWNlLm9y
+        Zy94bWxucy9kc3BhY2UvZGltIiB4bWxuczpkcnlhZD0iaHR0cDovL3B1cmwu
+        b3JnL2RyeWFkL3Rlcm1zLyIgeHNpOnNjaGVtYUxvY2F0aW9uPSJodHRwOi8v
+        ZGF0YWNpdGUub3JnL3NjaGVtYS9rZXJuZWwtMyBodHRwOi8vc2NoZW1hLmRh
+        dGFjaXRlLm9yZy9tZXRhL2tlcm5lbC0zL21ldGFkYXRhLnhzZCI+ICA8aWRl
+        bnRpZmllciBpZGVudGlmaWVyVHlwZT0iRE9JIj4xMC41MDYxL0RSWUFELjg1
+        MTU8L2lkZW50aWZpZXI+ICA8dmVyc2lvbj4xPC92ZXJzaW9uPiAgPGNyZWF0
+        b3JzPiAgICA8Y3JlYXRvcj4gICAgICA8Y3JlYXRvck5hbWU+T2xsb21vLCBC
+        ZW5qYW1pbjwvY3JlYXRvck5hbWU+ICAgIDwvY3JlYXRvcj4gICAgPGNyZWF0
+        b3I+ICAgICAgPGNyZWF0b3JOYW1lPkR1cmFuZCwgUGF0cmljazwvY3JlYXRv
+        ck5hbWU+ICAgIDwvY3JlYXRvcj4gICAgPGNyZWF0b3I+ICAgICAgPGNyZWF0
+        b3JOYW1lPlBydWdub2xsZSwgRnJhbmNrPC9jcmVhdG9yTmFtZT4gICAgPC9j
+        cmVhdG9yPiAgICA8Y3JlYXRvcj4gICAgICA8Y3JlYXRvck5hbWU+RG91emVy
+        eSwgRW1tYW51ZWwgSi4gUC48L2NyZWF0b3JOYW1lPiAgICA8L2NyZWF0b3I+
+        ICAgIDxjcmVhdG9yPiAgICAgIDxjcmVhdG9yTmFtZT5Bcm5hdGhhdSwgQ8Op
+        bGluZTwvY3JlYXRvck5hbWU+ICAgIDwvY3JlYXRvcj4gICAgPGNyZWF0b3I+
+        ICAgICAgPGNyZWF0b3JOYW1lPk5rb2doZSwgRGlldWRvbm7DqTwvY3JlYXRv
+        ck5hbWU+ICAgIDwvY3JlYXRvcj4gICAgPGNyZWF0b3I+ICAgICAgPGNyZWF0
+        b3JOYW1lPkxlcm95LCBFcmljPC9jcmVhdG9yTmFtZT4gICAgPC9jcmVhdG9y
+        PiAgICA8Y3JlYXRvcj4gICAgICA8Y3JlYXRvck5hbWU+UmVuYXVkLCBGcmFu
+        w6dvaXM8L2NyZWF0b3JOYW1lPiAgICA8L2NyZWF0b3I+ICA8L2NyZWF0b3Jz
+        PiAgPHRpdGxlcz4gICAgPHRpdGxlPkRhdGEgZnJvbTogQSBuZXcgbWFsYXJp
+        YSBhZ2VudCBpbiBBZnJpY2FuIGhvbWluaWRzLjwvdGl0bGU+ICA8L3RpdGxl
+        cz4gIDxwdWJsaXNoZXI+RHJ5YWQgRGlnaXRhbCBSZXBvc2l0b3J5PC9wdWJs
+        aXNoZXI+ICA8cHVibGljYXRpb25ZZWFyPjIwMTE8L3B1YmxpY2F0aW9uWWVh
+        cj4gIDxzdWJqZWN0cz4gICAgPHN1YmplY3Q+UGh5bG9nZW55PC9zdWJqZWN0
+        PiAgICA8c3ViamVjdD5NYWxhcmlhPC9zdWJqZWN0PiAgICA8c3ViamVjdD5Q
+        YXJhc2l0ZXM8L3N1YmplY3Q+ICAgIDxzdWJqZWN0PlRheG9ub215PC9zdWJq
+        ZWN0PiAgICA8c3ViamVjdD5NaXRvY2hvbmRyaWFsIGdlbm9tZTwvc3ViamVj
+        dD4gICAgPHN1YmplY3Q+QWZyaWNhPC9zdWJqZWN0PiAgICA8c3ViamVjdD5Q
+        bGFzbW9kaXVtPC9zdWJqZWN0PiAgPC9zdWJqZWN0cz4gIDxyZXNvdXJjZVR5
+        cGUgcmVzb3VyY2VUeXBlR2VuZXJhbD0iRGF0YXNldCI+RGF0YVBhY2thZ2U8
+        L3Jlc291cmNlVHlwZT4gIDxhbHRlcm5hdGVJZGVudGlmaWVycz4gICAgPGFs
+        dGVybmF0ZUlkZW50aWZpZXIgYWx0ZXJuYXRlSWRlbnRpZmllclR5cGU9ImNp
+        dGF0aW9uIj5PbGxvbW8gQiwgRHVyYW5kIFAsIFBydWdub2xsZSBGLCBEb3V6
+        ZXJ5IEVKUCwgQXJuYXRoYXUgQywgTmtvZ2hlIEQsIExlcm95IEUsIFJlbmF1
+        ZCBGICgyMDA5KSBBIG5ldyBtYWxhcmlhIGFnZW50IGluIEFmcmljYW4gaG9t
+        aW5pZHMuIFBMb1MgUGF0aG9nZW5zIDUoNSk6IGUxMDAwNDQ2LjwvYWx0ZXJu
+        YXRlSWRlbnRpZmllcj4gIDwvYWx0ZXJuYXRlSWRlbnRpZmllcnM+ICA8cmVs
+        YXRlZElkZW50aWZpZXJzPiAgICA8cmVsYXRlZElkZW50aWZpZXIgcmVsYXRl
+        ZElkZW50aWZpZXJUeXBlPSJET0kiIHJlbGF0aW9uVHlwZT0iSGFzUGFydCI+
+        MTAuNTA2MS9EUllBRC44NTE1LzE8L3JlbGF0ZWRJZGVudGlmaWVyPiAgICA8
+        cmVsYXRlZElkZW50aWZpZXIgcmVsYXRlZElkZW50aWZpZXJUeXBlPSJET0ki
+        IHJlbGF0aW9uVHlwZT0iSGFzUGFydCI+MTAuNTA2MS9EUllBRC44NTE1LzI8
+        L3JlbGF0ZWRJZGVudGlmaWVyPiAgICA8cmVsYXRlZElkZW50aWZpZXIgcmVs
+        YXRlZElkZW50aWZpZXJUeXBlPSJET0kiIHJlbGF0aW9uVHlwZT0iSXNSZWZl
+        cmVuY2VkQnkiPjEwLjEzNzEvSk9VUk5BTC5QUEFULjEwMDA0NDY8L3JlbGF0
+        ZWRJZGVudGlmaWVyPiAgICA8cmVsYXRlZElkZW50aWZpZXIgcmVsYXRlZElk
+        ZW50aWZpZXJUeXBlPSJQTUlEIiByZWxhdGlvblR5cGU9IklzUmVmZXJlbmNl
+        ZEJ5Ij4xOTQ3ODg3NzwvcmVsYXRlZElkZW50aWZpZXI+ICA8L3JlbGF0ZWRJ
+        ZGVudGlmaWVycz4gIDxyaWdodHNMaXN0PiAgICA8cmlnaHRzIHJpZ2h0c1VS
+        ST0iaHR0cDovL2NyZWF0aXZlY29tbW9ucy5vcmcvcHVibGljZG9tYWluL3pl
+        cm8vMS4wLyIvPiAgPC9yaWdodHNMaXN0PjwvcmVzb3VyY2U+
+    http_version: 
+  recorded_at: Mon, 27 Feb 2017 20:46:54 GMT
+recorded_with: VCR 3.0.3