bolognese 0.7.2 → 0.8

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Files changed (59) hide show
  1. checksums.yaml +4 -4
  2. data/Gemfile.lock +4 -1
  3. data/README.md +25 -16
  4. data/bolognese.gemspec +2 -1
  5. data/codemeta.json +39 -0
  6. data/lib/bolognese.rb +4 -0
  7. data/lib/bolognese/array.rb +11 -0
  8. data/lib/bolognese/author_utils.rb +35 -21
  9. data/lib/bolognese/bibtex.rb +4 -4
  10. data/lib/bolognese/codemeta.rb +8 -13
  11. data/lib/bolognese/crossref.rb +22 -20
  12. data/lib/bolognese/datacite.rb +61 -61
  13. data/lib/bolognese/datacite_json.rb +208 -0
  14. data/lib/bolognese/datacite_utils.rb +17 -48
  15. data/lib/bolognese/metadata.rb +83 -22
  16. data/lib/bolognese/schema_org.rb +42 -16
  17. data/lib/bolognese/utils.rb +79 -13
  18. data/lib/bolognese/version.rb +1 -1
  19. data/lib/bolognese/whitelist_scrubber.rb +45 -0
  20. data/spec/array_spec.rb +20 -0
  21. data/spec/author_utils_spec.rb +93 -9
  22. data/spec/bibtex_spec.rb +4 -4
  23. data/spec/cli_spec.rb +5 -0
  24. data/spec/codemeta_spec.rb +41 -31
  25. data/spec/crossref_spec.rb +47 -72
  26. data/spec/datacite_json_spec.rb +65 -0
  27. data/spec/datacite_spec.rb +67 -83
  28. data/spec/datacite_utils_spec.rb +9 -14
  29. data/spec/fixtures/datacite.json +49 -0
  30. data/spec/fixtures/datacite_software.json +18 -0
  31. data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/datacite/to_datacite_json.yml +214 -0
  32. data/spec/fixtures/vcr_cassettes/Bolognese_Crossref/author_from_schema_org/with_id.yml +930 -0
  33. data/spec/fixtures/vcr_cassettes/Bolognese_Crossref/author_to_schema_org/with_id.yml +930 -0
  34. data/spec/fixtures/vcr_cassettes/Bolognese_Crossref/authors_as_string/author.yml +137 -860
  35. data/spec/fixtures/vcr_cassettes/Bolognese_Crossref/authors_as_string/no_author.yml +137 -860
  36. data/spec/fixtures/vcr_cassettes/Bolognese_Crossref/authors_as_string/single_author.yml +137 -860
  37. data/spec/fixtures/vcr_cassettes/Bolognese_Crossref/authors_as_string/with_organization.yml +137 -860
  38. data/spec/fixtures/vcr_cassettes/Bolognese_Crossref/from_schema_org/with_id.yml +930 -0
  39. data/spec/fixtures/vcr_cassettes/Bolognese_Crossref/get_name_identifier/has_ORCID.yml +155 -0
  40. data/spec/fixtures/vcr_cassettes/Bolognese_Crossref/get_name_identifier/has_no_ORCID.yml +134 -0
  41. data/spec/fixtures/vcr_cassettes/Bolognese_Crossref/get_one_author/has_familyName.yml +155 -0
  42. data/spec/fixtures/vcr_cassettes/Bolognese_Crossref/get_one_author/has_name_in_display-order.yml +186 -0
  43. data/spec/fixtures/vcr_cassettes/Bolognese_Crossref/get_one_author/has_name_in_display-order_with_ORCID.yml +177 -0
  44. data/spec/fixtures/vcr_cassettes/Bolognese_Crossref/get_one_author/has_name_in_sort-order.yml +173 -0
  45. data/spec/fixtures/vcr_cassettes/Bolognese_Crossref/get_one_author/is_organization.yml +207 -0
  46. data/spec/fixtures/vcr_cassettes/Bolognese_Crossref/is_personal_name_/has_comma.yml +207 -0
  47. data/spec/fixtures/vcr_cassettes/Bolognese_Crossref/is_personal_name_/has_family_name.yml +207 -0
  48. data/spec/fixtures/vcr_cassettes/Bolognese_Crossref/is_personal_name_/has_id.yml +207 -0
  49. data/spec/fixtures/vcr_cassettes/Bolognese_Crossref/is_personal_name_/has_no_info.yml +207 -0
  50. data/spec/fixtures/vcr_cassettes/Bolognese_Crossref/is_personal_name_/has_type_organization.yml +207 -0
  51. data/spec/fixtures/vcr_cassettes/Bolognese_Crossref/is_personal_name_/has_type_person.yml +207 -0
  52. data/spec/fixtures/vcr_cassettes/Bolognese_Crossref/sanitize/should_only_keep_specific_tags.yml +930 -0
  53. data/spec/fixtures/vcr_cassettes/Bolognese_Crossref/sanitize/should_remove_a_tags.yml +930 -0
  54. data/spec/fixtures/vcr_cassettes/Bolognese_Crossref/to_schema_org/with_id.yml +930 -0
  55. data/spec/fixtures/vcr_cassettes/Bolognese_Datacite/insert_related_identifiers/related_identifier.yml +173 -0
  56. data/spec/fixtures/vcr_cassettes/Bolognese_DataciteJson/get_metadata_as_bibtex/BlogPosting.yml +155 -0
  57. data/spec/schema_org_spec.rb +17 -14
  58. data/spec/utils_spec.rb +32 -2
  59. metadata +54 -4
data/spec/fixtures/vcr_cassettes/Bolognese_Crossref/get_name_identifier/has_ORCID.yml ADDED
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+ <identifier identifierType="DOI">10.5438/4K3M-NYVG</identifier>
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+ <creators>
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+ <creatorName>Fenner, Martin</creatorName>
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+ <givenName>Martin</givenName>
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+ <familyName>Fenner</familyName>
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+ <nameIdentifier schemeURI="http://orcid.org/" nameIdentifierScheme="ORCID">0000-0003-1419-2405</nameIdentifier>
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+ </creator>
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+ </creators>
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+ <titles>
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+ <title>Eating your own Dog Food</title>
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+ </titles>
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+ <publisher>DataCite</publisher>
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+ <publicationYear>2016</publicationYear>
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+ <resourceType resourceTypeGeneral="Text">BlogPosting</resourceType>
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+ <alternateIdentifiers>
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+ <alternateIdentifier alternateIdentifierType="Local accession number">MS-49-3632-5083</alternateIdentifier>
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+ <subjects>
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+ <subject>doi</subject>
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+ <subject>metadata</subject>
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+ <dates>
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+ <date dateType="Created">2016-12-20</date>
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+ <date dateType="Issued">2016-12-20</date>
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+ <date dateType="Updated">2016-12-20</date>
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+ </dates>
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+ <relatedIdentifier relatedIdentifierType="DOI" relationType="References">10.5438/0012</relatedIdentifier>
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+ </relatedIdentifiers>
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+ <version>1.0</version>
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+ <descriptions>
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+ <description descriptionType="Abstract">Eating your own dog food is a slang term to describe that an organization should itself use the products and services it provides. For DataCite this means that we should use DOIs with appropriate metadata and strategies for long-term preservation for...</description>
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data/spec/fixtures/vcr_cassettes/Bolognese_Crossref/get_name_identifier/has_no_ORCID.yml ADDED
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+ Nathaniel</creatorName>\n</creator>\n</creators>\n<titles>\n\t<title>The Minimum
116
+ Size of Qubit Unextendible Product Bases</title>\n</titles>\n<publisher>Schloss
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+ Dagstuhl - Leibniz-Zentrum fuer Informatik GmbH, Wadern/Saarbruecken, Germany</publisher>\n<publicationYear>2013</publicationYear>\n<subjects>\n\t<subject>Computer
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+ 2. The cardinality of the smallest unextendible product basis is known in
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+ all qubit cases except when the number of parties is a multiple of 4 greater
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+ than 4 itself. We construct small unextendible product bases in all of the
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+ <creatorName>Kristian Garza</creatorName>
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+ <title>Analysis Tools for Crossover Experiment of UI using Choice Architecture</title>
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+ </titles>
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+ <publisher>Zenodo</publisher>
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+ <publicationYear>2016</publicationYear>
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+ <subjects>
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+ <subject>choice architecture</subject>
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+ <subject>crossover experiment</subject>
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+ <subject>hci</subject>
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+ </subjects>
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+ <date dateType="Issued">2016-03-27</date>
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+ <rightsList>
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+ <rights rightsURI="info:eu-repo/semantics/openAccess">Open Access</rights>
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+ <rights rightsURI="https://creativecommons.org/licenses/by-nc-sa/4.0/">Creative Commons Attribution-NonCommercial-ShareAlike</rights>
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+ </rightsList>
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+ <descriptions>
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+ <description descriptionType="Abstract">&lt;p&gt;&amp;nbsp;&lt;/p&gt;
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+
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+ &lt;p&gt;This tools are used to analyse the data produced by the Crosssover Experiment I designed to test Choice Architecture techniques as UI interventions in a SEEk4Science data catalogue. It contains:&lt;/p&gt;
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+
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+ &lt;p&gt;- Data structures for the experimental data.&lt;br /&gt;
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+ - Visualisation functions&lt;br /&gt;
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+ - Analysis functions&lt;/p&gt;
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+
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+ &lt;p&gt;## Installation&lt;/p&gt;
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+
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+ &lt;p&gt;- R&lt;br /&gt;
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+ - python&lt;br /&gt;
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+ - ipython 4&lt;/p&gt;
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+
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+ &lt;p&gt;Clone and use.&lt;/p&gt;
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+
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+ &lt;p&gt;## Usage&lt;/p&gt;
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+
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+ &lt;p&gt;&lt;br /&gt;
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+ ```python&lt;br /&gt;
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+ source(&amp;#39;parallel_plot.r&amp;#39;)&lt;br /&gt;
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+ with(z, parallelset(trt,response, freq=count, alpha=0.2))&lt;br /&gt;
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+ ```&lt;/p&gt;
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+
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+ &lt;p&gt;&lt;br /&gt;
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+ ## Contributing&lt;/p&gt;
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+
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+ &lt;p&gt;1. Fork it!&lt;br /&gt;
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+ 2. Create your feature branch: `git checkout -b my-new-feature`&lt;br /&gt;
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+ 3. Commit your changes: `git commit -am &amp;#39;Add some feature&amp;#39;`&lt;br /&gt;
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+ 4. Push to the branch: `git push origin my-new-feature`&lt;br /&gt;
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+ 5. Submit a pull request :D&lt;/p&gt;
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+
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+ &lt;p&gt;&lt;br /&gt;
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+ ## License&lt;/p&gt;
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+
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+ &lt;p&gt;This work supports my PhD Thesis at University of Manchester.&lt;/p&gt;</description>
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