biointerchange 0.2.0 → 0.2.1

data/supplemental/python/biointerchange/gff3o.py

@@ -9,6 +9,13 @@ def _namespace_GFF3O(accession):
 
 class GFF3O:
 
+    @classmethod
+    def seqid(cls):
+        """Establishes the landmark (cls, e.g. a chromosome) on which a feature is located.
+        (GFF3_0004)
+        """
+        return _namespace_GFF3O('GFF3_0004')
+
     @classmethod
     def strand(cls):
         """Either:
@@ -81,20 +88,6 @@ class GFF3O:
         """
         return [ _namespace_GFF3O('GFF3_0026'), _namespace_GFF3O('GFF3_0028') ]
 
-    @classmethod
-    def dbxref(cls):
-        """A database cross-reference to associate a sequence alteration to its  representation in another database.
-        (cls, GFF3_0034)
-        """
-        return _namespace_GFF3O('GFF3_0034')
-
-    @classmethod
-    def ontology_term(cls):
-        """A cross-reference to an ontology term that is associated with a feature.
-        (cls, GFF3_0035)
-        """
-        return _namespace_GFF3O('GFF3_0035')
-
     @classmethod
     def target(cls):
         """Identifies the target that the features aligns to.
@@ -121,11 +114,11 @@ class GFF3O:
         return _namespace_GFF3O('GFF3_0047')
 
     @classmethod
-    def seqid(cls):
-        """ID of the landmark that establishes the coordinate system for the current feature.
-        (cls, GFF3_0004)
+    def feature_ontology(cls):
+        """Explicit link-out to one or more ontologies that have been used for describing features. This is a meta comment about the URIs that link out to SO/SOFA or other ontologies.
+        (cls, GFF3_0056)
         """
-        return _namespace_GFF3O('GFF3_0004')
+        return _namespace_GFF3O('GFF3_0056')
 
     @classmethod
     def source(cls):
@@ -136,7 +129,7 @@ class GFF3O:
 
     @classmethod
     def type(cls):
-        """Type of the feature, which is either a term from the "lite" version of the Sequence Ontology (cls, SOFA), a term from the full Sequence Ontology (SO) that is a child of sequence_feature (SO:0000110), or a SOFA or SO accession number.
+        """Type of the feature, which is either an entry the "lite" version of the Sequence Ontology (cls, SOFA) or a child entry of sequence_feature (SO:0000110) of the full Sequence Ontology (SO).
         (GFF3_0006)
         """
         return _namespace_GFF3O('GFF3_0006')
@@ -149,8 +142,11 @@ class GFF3O:
         Or:
             Start coordinate of the target.
             (GFF3_0042)
+        Or:
+            Genomic start coordinate of the landmark.
+            (GFF3_0054)
         """
-        return [ _namespace_GFF3O('GFF3_0007'), _namespace_GFF3O('GFF3_0042') ]
+        return [ _namespace_GFF3O('GFF3_0007'), _namespace_GFF3O('GFF3_0042'), _namespace_GFF3O('GFF3_0054') ]
 
     @classmethod
     def end(cls):
@@ -160,8 +156,11 @@ class GFF3O:
         Or:
             End coordinate of the target.
             (GFF3_0043)
+        Or:
+            Genomic end coordinate of the landmark.
+            (GFF3_0055)
         """
-        return [ _namespace_GFF3O('GFF3_0008'), _namespace_GFF3O('GFF3_0043') ]
+        return [ _namespace_GFF3O('GFF3_0008'), _namespace_GFF3O('GFF3_0043'), _namespace_GFF3O('GFF3_0055') ]
 
     @classmethod
     def score(cls):
@@ -206,29 +205,25 @@ class GFF3O:
         return _namespace_GFF3O('GFF3_0029')
 
     @classmethod
-    def dbxref_properties(cls):
-        """Properties that are directly associated with DBXRef class instances.
-        (cls, GFF3_0031)
+    def dbxref(cls):
+        """A database cross-reference to associate a sequence alteration to its representation in another database.
+        (cls, GFF3_0034)
         """
-        return _namespace_GFF3O('GFF3_0031')
+        return _namespace_GFF3O('GFF3_0034')
 
     @classmethod
-    def name(cls):
-        """Either:
-            Name of an external database. For example, "dbSNP" or "OMIM".
-            (cls, GFF3_0032)
-        Or:
-            Name of a feature, which can be used for display purposes. The name is not a unique property among features.
-            (GFF3_0036)
+    def ontology_term(cls):
+        """A cross-reference to an ontology term that is associated with a feature.
+        (cls, GFF3_0035)
         """
-        return [ _namespace_GFF3O('GFF3_0032'), _namespace_GFF3O('GFF3_0036') ]
+        return _namespace_GFF3O('GFF3_0035')
 
     @classmethod
-    def xref(cls):
-        """External database identifier. For example, for dbSNP, this identifier could be "rs3131969".
-        (cls, GFF3_0033)
+    def name(cls):
+        """Name of a feature, which can be used for display purposes. The name is not a unique property among features.
+        (cls, GFF3_0036)
         """
-        return _namespace_GFF3O('GFF3_0033')
+        return _namespace_GFF3O('GFF3_0036')
 
     @classmethod
     def alias(cls):
@@ -265,6 +260,31 @@ class GFF3O:
         """
         return _namespace_GFF3O('GFF3_0049')
 
+    @classmethod
+    def landmark_properties(cls):
+        """Properties that are directly associated with Landmark class instances.
+        (cls, GFF3_0052)
+        """
+        return _namespace_GFF3O('GFF3_0052')
+
+    @classmethod
+    def id(cls):
+        """ID that uniquely establishes the Landmark's identity within a Set.
+        (cls, GFF3_0053)
+        """
+        return _namespace_GFF3O('GFF3_0053')
+
+    @classmethod
+    def sequence(cls):
+        """Either:
+            Sequence associated with this feature, if it has been specified using a FASTA string.
+            (cls, GFF3_0057)
+        Or:
+            Sequence associated with this feature, if it has been specified using a FASTA string.
+            (GFF3_0058)
+        """
+        return [ _namespace_GFF3O('GFF3_0057'), _namespace_GFF3O('GFF3_0058') ]
+
     @classmethod
     def Set(cls):
         """Set of genomic sequence features, whose identifiers are unique within the set.
@@ -293,13 +313,6 @@ class GFF3O:
         """
         return _namespace_GFF3O('GFF3_0016')
 
-    @classmethod
-    def DBXRef(cls):
-        """A class describing relationships between features and external databases.
-        (cls, GFF3_0030)
-        """
-        return _namespace_GFF3O('GFF3_0030')
-
     @classmethod
     def Target(cls):
         """Indicates a feature's "target" of a nucleotide-to-nucleotide or protein-to-nucleotide alignment.
@@ -307,6 +320,13 @@ class GFF3O:
         """
         return _namespace_GFF3O('GFF3_0038')
 
+    @classmethod
+    def Landmark(cls):
+        """A landmark that establishes the coordinate system for features.
+        (cls, GFF3_0051)
+        """
+        return _namespace_GFF3O('GFF3_0051')
+
     @classmethod
     def Positive(cls):
         """Location on the positive (cls, forward) strand.
@@ -341,6 +361,8 @@ class GFF3O:
         
         uri -- URI that is tested for being an object property
         """
+        if uri == _namespace_GFF3O('GFF3_0004'):
+            return True
         if uri == _namespace_GFF3O('GFF3_0010'):
             return True
         if uri == _namespace_GFF3O('GFF3_0012'):
@@ -357,10 +379,6 @@ class GFF3O:
             return True
         if uri == _namespace_GFF3O('GFF3_0026'):
             return True
-        if uri == _namespace_GFF3O('GFF3_0034'):
-            return True
-        if uri == _namespace_GFF3O('GFF3_0035'):
-            return True
         if uri == _namespace_GFF3O('GFF3_0039'):
             return True
         if uri == _namespace_GFF3O('GFF3_0044'):
@@ -371,6 +389,8 @@ class GFF3O:
             return True
         if uri == _namespace_GFF3O('GFF3_0050'):
             return True
+        if uri == _namespace_GFF3O('GFF3_0056'):
+            return True
         return False
 
     @classmethod
@@ -379,8 +399,6 @@ class GFF3O:
         
         uri -- URI that is tested for being a datatype property
         """
-        if uri == _namespace_GFF3O('GFF3_0004'):
-            return True
         if uri == _namespace_GFF3O('GFF3_0005'):
             return True
         if uri == _namespace_GFF3O('GFF3_0006'):
@@ -405,11 +423,9 @@ class GFF3O:
             return True
         if uri == _namespace_GFF3O('GFF3_0029'):
             return True
-        if uri == _namespace_GFF3O('GFF3_0031'):
-            return True
-        if uri == _namespace_GFF3O('GFF3_0032'):
+        if uri == _namespace_GFF3O('GFF3_0034'):
             return True
-        if uri == _namespace_GFF3O('GFF3_0033'):
+        if uri == _namespace_GFF3O('GFF3_0035'):
             return True
         if uri == _namespace_GFF3O('GFF3_0036'):
             return True
@@ -429,6 +445,18 @@ class GFF3O:
             return True
         if uri == _namespace_GFF3O('GFF3_0049'):
             return True
+        if uri == _namespace_GFF3O('GFF3_0052'):
+            return True
+        if uri == _namespace_GFF3O('GFF3_0053'):
+            return True
+        if uri == _namespace_GFF3O('GFF3_0054'):
+            return True
+        if uri == _namespace_GFF3O('GFF3_0055'):
+            return True
+        if uri == _namespace_GFF3O('GFF3_0057'):
+            return True
+        if uri == _namespace_GFF3O('GFF3_0058'):
+            return True
         return False
 
     @classmethod
@@ -445,10 +473,10 @@ class GFF3O:
             return True
         if uri == _namespace_GFF3O('GFF3_0016'):
             return True
-        if uri == _namespace_GFF3O('GFF3_0030'):
-            return True
         if uri == _namespace_GFF3O('GFF3_0038'):
             return True
+        if uri == _namespace_GFF3O('GFF3_0051'):
+            return True
         return False
 
     @classmethod
@@ -489,5 +517,5 @@ class GFF3O:
             return cls.has_parent(cls.__parent_properties[uri], parent)
         return False
 
-    __parent_properties = { _namespace_GFF3O('GFF3_0010') : _namespace_GFF3O('GFF3_0026') , _namespace_GFF3O('GFF3_0012') : _namespace_GFF3O('GFF3_0026') , _namespace_GFF3O('GFF3_0014') : _namespace_GFF3O('GFF3_0026') , _namespace_GFF3O('GFF3_0015') : _namespace_GFF3O('GFF3_0025') , _namespace_GFF3O('GFF3_0021') : _namespace_GFF3O('GFF3_0026') , _namespace_GFF3O('GFF3_0023') : _namespace_GFF3O('GFF3_0025') , _namespace_GFF3O('GFF3_0034') : _namespace_GFF3O('GFF3_0026') , _namespace_GFF3O('GFF3_0035') : _namespace_GFF3O('GFF3_0026') , _namespace_GFF3O('GFF3_0039') : _namespace_GFF3O('GFF3_0026') , _namespace_GFF3O('GFF3_0045') : _namespace_GFF3O('GFF3_0044') , _namespace_GFF3O('GFF3_0047') : _namespace_GFF3O('GFF3_0026') , _namespace_GFF3O('GFF3_0050') : _namespace_GFF3O('GFF3_0044') , _namespace_GFF3O('GFF3_0004') : _namespace_GFF3O('GFF3_0028') , _namespace_GFF3O('GFF3_0005') : _namespace_GFF3O('GFF3_0028') , _namespace_GFF3O('GFF3_0006') : _namespace_GFF3O('GFF3_0028') , _namespace_GFF3O('GFF3_0007') : _namespace_GFF3O('GFF3_0028') , _namespace_GFF3O('GFF3_0008') : _namespace_GFF3O('GFF3_0028') , _namespace_GFF3O('GFF3_0009') : _namespace_GFF3O('GFF3_0028') , _namespace_GFF3O('GFF3_0011') : _namespace_GFF3O('GFF3_0028') , _namespace_GFF3O('GFF3_0013') : _namespace_GFF3O('GFF3_0029') , _namespace_GFF3O('GFF3_0022') : _namespace_GFF3O('GFF3_0027') , _namespace_GFF3O('GFF3_0024') : _namespace_GFF3O('GFF3_0027') , _namespace_GFF3O('GFF3_0032') : _namespace_GFF3O('GFF3_0031') , _namespace_GFF3O('GFF3_0033') : _namespace_GFF3O('GFF3_0031') , _namespace_GFF3O('GFF3_0036') : _namespace_GFF3O('GFF3_0028') , _namespace_GFF3O('GFF3_0037') : _namespace_GFF3O('GFF3_0028') , _namespace_GFF3O('GFF3_0041') : _namespace_GFF3O('GFF3_0040') , _namespace_GFF3O('GFF3_0042') : _namespace_GFF3O('GFF3_0040') , _namespace_GFF3O('GFF3_0043') : _namespace_GFF3O('GFF3_0040') , _namespace_GFF3O('GFF3_0046') : _namespace_GFF3O('GFF3_0028') , _namespace_GFF3O('GFF3_0048') : _namespace_GFF3O('GFF3_0028') , _namespace_GFF3O('GFF3_0049') : _namespace_GFF3O('GFF3_0028') }
+    __parent_properties = { _namespace_GFF3O('GFF3_0004') : _namespace_GFF3O('GFF3_0026') , _namespace_GFF3O('GFF3_0010') : _namespace_GFF3O('GFF3_0026') , _namespace_GFF3O('GFF3_0012') : _namespace_GFF3O('GFF3_0026') , _namespace_GFF3O('GFF3_0014') : _namespace_GFF3O('GFF3_0026') , _namespace_GFF3O('GFF3_0015') : _namespace_GFF3O('GFF3_0025') , _namespace_GFF3O('GFF3_0021') : _namespace_GFF3O('GFF3_0026') , _namespace_GFF3O('GFF3_0023') : _namespace_GFF3O('GFF3_0025') , _namespace_GFF3O('GFF3_0039') : _namespace_GFF3O('GFF3_0026') , _namespace_GFF3O('GFF3_0045') : _namespace_GFF3O('GFF3_0044') , _namespace_GFF3O('GFF3_0047') : _namespace_GFF3O('GFF3_0026') , _namespace_GFF3O('GFF3_0050') : _namespace_GFF3O('GFF3_0044') , _namespace_GFF3O('GFF3_0056') : _namespace_GFF3O('GFF3_0025') , _namespace_GFF3O('GFF3_0005') : _namespace_GFF3O('GFF3_0028') , _namespace_GFF3O('GFF3_0006') : _namespace_GFF3O('GFF3_0028') , _namespace_GFF3O('GFF3_0007') : _namespace_GFF3O('GFF3_0028') , _namespace_GFF3O('GFF3_0008') : _namespace_GFF3O('GFF3_0028') , _namespace_GFF3O('GFF3_0009') : _namespace_GFF3O('GFF3_0028') , _namespace_GFF3O('GFF3_0011') : _namespace_GFF3O('GFF3_0028') , _namespace_GFF3O('GFF3_0013') : _namespace_GFF3O('GFF3_0029') , _namespace_GFF3O('GFF3_0022') : _namespace_GFF3O('GFF3_0027') , _namespace_GFF3O('GFF3_0024') : _namespace_GFF3O('GFF3_0027') , _namespace_GFF3O('GFF3_0034') : _namespace_GFF3O('GFF3_0028') , _namespace_GFF3O('GFF3_0035') : _namespace_GFF3O('GFF3_0028') , _namespace_GFF3O('GFF3_0036') : _namespace_GFF3O('GFF3_0028') , _namespace_GFF3O('GFF3_0037') : _namespace_GFF3O('GFF3_0028') , _namespace_GFF3O('GFF3_0041') : _namespace_GFF3O('GFF3_0040') , _namespace_GFF3O('GFF3_0042') : _namespace_GFF3O('GFF3_0040') , _namespace_GFF3O('GFF3_0043') : _namespace_GFF3O('GFF3_0040') , _namespace_GFF3O('GFF3_0046') : _namespace_GFF3O('GFF3_0028') , _namespace_GFF3O('GFF3_0048') : _namespace_GFF3O('GFF3_0028') , _namespace_GFF3O('GFF3_0049') : _namespace_GFF3O('GFF3_0028') , _namespace_GFF3O('GFF3_0053') : _namespace_GFF3O('GFF3_0052') , _namespace_GFF3O('GFF3_0054') : _namespace_GFF3O('GFF3_0052') , _namespace_GFF3O('GFF3_0055') : _namespace_GFF3O('GFF3_0052') , _namespace_GFF3O('GFF3_0057') : _namespace_GFF3O('GFF3_0028') , _namespace_GFF3O('GFF3_0058') : _namespace_GFF3O('GFF3_0052') }
 

data/supplemental/python/biointerchange/gvf1o.py

@@ -9,6 +9,17 @@ def _namespace_GVF1O(accession):
 
 class GVF1O:
 
+    @classmethod
+    def seqid(cls):
+        """Either:
+            Establishes the landmark (cls, e.g. a chromosome) on which a feature is located.
+            (GVF1_0004)
+        Or:
+            Link to the landmark that establishes the coordinate system for the breakpoint.
+            (GVF1_0072)
+        """
+        return [ _namespace_GVF1O('GVF1_0004'), _namespace_GVF1O('GVF1_0072') ]
+
     @classmethod
     def strand(cls):
         """Either:
@@ -25,10 +36,14 @@ class GVF1O:
 
     @classmethod
     def attributes(cls):
-        """Tag name/value pair attributes of a feature.
-        (cls, GVF1_0012)
+        """Either:
+            Tag name/value pair attributes of a feature.
+            (cls, GVF1_0012)
+        Or:
+            Tag name/value pair attributes that are not captured by the GVF specification.
+            (GVF1_0152)
         """
-        return _namespace_GVF1O('GVF1_0012')
+        return [ _namespace_GVF1O('GVF1_0012'), _namespace_GVF1O('GVF1_0152') ]
 
     @classmethod
     def parent(cls):
@@ -107,13 +122,6 @@ class GVF1O:
         """
         return _namespace_GVF1O('GVF1_0043')
 
-    @classmethod
-    def feature_id(cls):
-        """Features that are affected by this sequence alteration effect.
-        (cls, GVF1_0044)
-        """
-        return _namespace_GVF1O('GVF1_0044')
-
     @classmethod
     def start_range(cls):
         """A coordinate range for ambiguous start coordinates.
@@ -188,10 +196,14 @@ class GVF1O:
 
     @classmethod
     def effect_properties(cls):
-        """Properties that are directly associated with Effect class instances.
-        (cls, GVF1_0070)
+        """Either:
+            Properties that are directly associated with Effect class instances.
+            (cls, GVF1_0070)
+        Or:
+            Properties that are directly associated with Effect class instances.
+            (GVF1_0158)
         """
-        return _namespace_GVF1O('GVF1_0070')
+        return [ _namespace_GVF1O('GVF1_0070'), _namespace_GVF1O('GVF1_0158') ]
 
     @classmethod
     def breakpoint_properties(cls):
@@ -206,10 +218,14 @@ class GVF1O:
 
     @classmethod
     def dbxref(cls):
-        """A database cross-reference to associate a sequence alteration to its  representation in another database.
-        (cls, GVF1_0078)
+        """Either:
+            A database cross-reference to associate a sequence alteration to its representation in another database.
+            (cls, GVF1_0078)
+        Or:
+            A database cross-reference to associate a structured pragma to a representation in another database.
+            (GVF1_0104)
         """
-        return _namespace_GVF1O('GVF1_0078')
+        return [ _namespace_GVF1O('GVF1_0078'), _namespace_GVF1O('GVF1_0104') ]
 
     @classmethod
     def breakpoint(cls):
@@ -230,15 +246,141 @@ class GVF1O:
         return [ _namespace_GVF1O('GVF1_0089'), _namespace_GVF1O('GVF1_0092') ]
 
     @classmethod
-    def seqid(cls):
+    def technologyplatform_properties(cls):
         """Either:
-            ID of the landmark that establishes the coordinate system for a feature.
-            (cls, GVF1_0004)
+            Properties that are directly associated with TechnologyPlatform class instances.
+            (cls, GVF1_0102)
         Or:
-            ID of the landmark that establishes the coordinate system for a breakpoint.
-            (GVF1_0072)
+            Properties that are directly associated with TechnologyPlatform class instances.
+            (GVF1_0107)
         """
-        return [ _namespace_GVF1O('GVF1_0004'), _namespace_GVF1O('GVF1_0072') ]
+        return [ _namespace_GVF1O('GVF1_0102'), _namespace_GVF1O('GVF1_0107') ]
+
+    @classmethod
+    def datasource_properties(cls):
+        """Properties that are directly associated with DataSource class instances.
+        (cls, GVF1_0103)
+        """
+        return _namespace_GVF1O('GVF1_0103')
+
+    @classmethod
+    def structuredpragma_properties(cls):
+        """Either:
+            Properties describing structured pragma properties.
+            (cls, GVF1_0112)
+        Or:
+            Properties describing structured pragma properties.
+            (GVF1_0113)
+        """
+        return [ _namespace_GVF1O('GVF1_0112'), _namespace_GVF1O('GVF1_0113') ]
+
+    @classmethod
+    def read_type(cls):
+        """Types of reads produced by the platform.
+        (cls, GVF1_0119)
+        """
+        return _namespace_GVF1O('GVF1_0119')
+
+    @classmethod
+    def data_type(cls):
+        """Datatype of this data source.
+        (cls, GVF1_0120)
+        """
+        return _namespace_GVF1O('GVF1_0120')
+
+    @classmethod
+    def technology_platform(cls):
+        """Technology platform that was used to derive the feature.
+        (cls, GVF1_0121)
+        """
+        return _namespace_GVF1O('GVF1_0121')
+
+    @classmethod
+    def data_source(cls):
+        """Data source origin of the feature.
+        (cls, GVF1_0122)
+        """
+        return _namespace_GVF1O('GVF1_0122')
+
+    @classmethod
+    def score_method(cls):
+        """Used scoring method.
+        (cls, GVF1_0123)
+        """
+        return _namespace_GVF1O('GVF1_0123')
+
+    @classmethod
+    def source_method(cls):
+        """Further information about the algorithm/methodologies used.
+        (cls, GVF1_0124)
+        """
+        return _namespace_GVF1O('GVF1_0124')
+
+    @classmethod
+    def phenotype_description(cls):
+        """Further information about an individual's phenotype. Applies only to single individual sets.
+        (cls, GVF1_0125)
+        """
+        return _namespace_GVF1O('GVF1_0125')
+
+    @classmethod
+    def attribute_method(cls):
+        """Either:
+            Further information about the associated attribute(cls, s).
+            (GVF1_0126)
+        Or:
+            Further information about the associated attribute(s).
+            (GVF1_0127)
+        Or:
+            Further information about the associated attribute(s).
+            (GVF1_0129)
+        Or:
+            Further information about the associated attribute(s).
+            (GVF1_0130)
+        Or:
+            Further information about the associated attribute(s).
+            (GVF1_0131)
+        """
+        return [ _namespace_GVF1O('GVF1_0126'), _namespace_GVF1O('GVF1_0127'), _namespace_GVF1O('GVF1_0129'), _namespace_GVF1O('GVF1_0130'), _namespace_GVF1O('GVF1_0131') ]
+
+    @classmethod
+    def attribute_properties(cls):
+        """Either:
+            Properties about Attribute instances.
+            (cls, GVF1_0128)
+        Or:
+            Properties that are directly associated with Attribute class instances.
+            (GVF1_0064)
+        """
+        return [ _namespace_GVF1O('GVF1_0128'), _namespace_GVF1O('GVF1_0064') ]
+
+    @classmethod
+    def sex(cls):
+        """Denotes the sex of the sequenced individual for single-individual sets.
+        (cls, GVF1_0147)
+        """
+        return _namespace_GVF1O('GVF1_0147')
+
+    @classmethod
+    def genomic_source(cls):
+        """Denotes the source of genomic data (cls, on a cell-type level).
+        (GVF1_0148)
+        """
+        return _namespace_GVF1O('GVF1_0148')
+
+    @classmethod
+    def feature_ontology(cls):
+        """Explicit link-out to one or more ontologies that have been used for describing features. This is a meta comment about the URIs that link out to SO/SOFA or other ontologies.
+        (cls, GVF1_0150)
+        """
+        return _namespace_GVF1O('GVF1_0150')
+
+    @classmethod
+    def target(cls):
+        """Identifies the target that the features aligns to.
+        (cls, GVF1_0155)
+        """
+        return _namespace_GVF1O('GVF1_0155')
 
     @classmethod
     def source(cls):
@@ -249,7 +391,7 @@ class GVF1O:
 
     @classmethod
     def type(cls):
-        """Type of the feature, which is either a term from the "lite" version of the Sequence Ontology (cls, SOFA), a term from the full Sequence Ontology (SO) that is a child of sequence_feature (SO:0000110), or a SOFA or SO accession number.
+        """Type of the feature, which is either an entry the "lite" version of the Sequence Ontology (cls, SOFA) or a child entry of sequence_feature (SO:0000110) of the full Sequence Ontology (SO).
         (GVF1_0006)
         """
         return _namespace_GVF1O('GVF1_0006')
@@ -268,8 +410,11 @@ class GVF1O:
         Or:
             Start coordinate of the target.
             (GVF1_0094)
+        Or:
+            Genomic start coordinate of the landmark.
+            (GVF1_0138)
         """
-        return [ _namespace_GVF1O('GVF1_0007'), _namespace_GVF1O('GVF1_0048'), _namespace_GVF1O('GVF1_0073'), _namespace_GVF1O('GVF1_0094') ]
+        return [ _namespace_GVF1O('GVF1_0007'), _namespace_GVF1O('GVF1_0048'), _namespace_GVF1O('GVF1_0073'), _namespace_GVF1O('GVF1_0094'), _namespace_GVF1O('GVF1_0138') ]
 
     @classmethod
     def end(cls):
@@ -285,8 +430,11 @@ class GVF1O:
         Or:
             End coordinate of the target.
             (GVF1_0095)
+        Or:
+            Genomic end coordinate of the landmark.
+            (GVF1_0139)
         """
-        return [ _namespace_GVF1O('GVF1_0008'), _namespace_GVF1O('GVF1_0049'), _namespace_GVF1O('GVF1_0074'), _namespace_GVF1O('GVF1_0095') ]
+        return [ _namespace_GVF1O('GVF1_0008'), _namespace_GVF1O('GVF1_0049'), _namespace_GVF1O('GVF1_0074'), _namespace_GVF1O('GVF1_0095'), _namespace_GVF1O('GVF1_0139') ]
 
     @classmethod
     def score(cls):
@@ -297,10 +445,14 @@ class GVF1O:
 
     @classmethod
     def tag(cls):
-        """Tag name of a feature attribute.
-        (cls, GVF1_0013)
+        """Either:
+            Tag name of a feature attribute.
+            (cls, GVF1_0013)
+        Or:
+            Tag name of an user defined structured attribute.
+            (GVF1_0154)
         """
-        return _namespace_GVF1O('GVF1_0013')
+        return [ _namespace_GVF1O('GVF1_0013'), _namespace_GVF1O('GVF1_0154') ]
 
     @classmethod
     def gvf_version(cls):
@@ -325,10 +477,14 @@ class GVF1O:
 
     @classmethod
     def id(cls):
-        """A unique identifier for the feature within the feature set.
-        (cls, GVF1_0026)
+        """Either:
+            A unique identifier for the feature within the feature set.
+            (cls, GVF1_0026)
+        Or:
+            ID that uniquely establishes the Landmark's identity within a Set.
+            (GVF1_0137)
         """
-        return _namespace_GVF1O('GVF1_0026')
+        return [ _namespace_GVF1O('GVF1_0026'), _namespace_GVF1O('GVF1_0137') ]
 
     @classmethod
     def alias(cls):
@@ -337,20 +493,6 @@ class GVF1O:
         """
         return _namespace_GVF1O('GVF1_0027')
 
-    @classmethod
-    def name(cls):
-        """Name of an external database. For example, "dbSNP" or "OMIM".
-        (cls, GVF1_0029)
-        """
-        return _namespace_GVF1O('GVF1_0029')
-
-    @classmethod
-    def xref(cls):
-        """External database identifier. For example, for dbSNP, this identifier could be "rs3131969".
-        (cls, GVF1_0030)
-        """
-        return _namespace_GVF1O('GVF1_0030')
-
     @classmethod
     def reference_seq(cls):
         """Sequence from the reference genome.
@@ -379,12 +521,23 @@ class GVF1O:
         """
         return _namespace_GVF1O('GVF1_0039')
 
+    @classmethod
+    def feature(cls):
+        """Features that are affected by this sequence alteration effect. This can be an external feature identifier, such as an Ensembl gene/transcript identifier.
+        (cls, GVF1_0044)
+        """
+        return _namespace_GVF1O('GVF1_0044')
+
     @classmethod
     def phased(cls):
-        """Unclear from GVF specification.
-        (cls, GVF1_0050)
+        """Either:
+            Unclear from GVF specification.
+            (cls, GVF1_0050)
+        Or:
+            Indicates whether this particular is phased. Used to encode ##phased-genotypes statements.
+            (GVF1_0101)
         """
-        return _namespace_GVF1O('GVF1_0050')
+        return [ _namespace_GVF1O('GVF1_0050'), _namespace_GVF1O('GVF1_0101') ]
 
     @classmethod
     def variant_codon(cls):
@@ -421,20 +574,6 @@ class GVF1O:
         """
         return _namespace_GVF1O('GVF1_0061')
 
-    @classmethod
-    def dbxref_properties(cls):
-        """Properties that are directly associated with DBXRef class instances.
-        (cls, GVF1_0062)
-        """
-        return _namespace_GVF1O('GVF1_0062')
-
-    @classmethod
-    def attribute_properties(cls):
-        """Properties that are directly associated with Attribute class instances.
-        (cls, GVF1_0064)
-        """
-        return _namespace_GVF1O('GVF1_0064')
-
     @classmethod
     def a_context(cls):
         """Sequence context (cls, positive strand) of a feature on the 5' end.
@@ -463,6 +602,87 @@ class GVF1O:
         """
         return _namespace_GVF1O('GVF1_0093')
 
+    @classmethod
+    def ontology_term(cls):
+        """A cross-reference to an ontology term that is associated with a feature.
+        (cls, GVF1_0096)
+        """
+        return _namespace_GVF1O('GVF1_0096')
+
+    @classmethod
+    def comment(cls):
+        """An arbitrary comment. Free text.
+        (cls, GVF1_0105)
+        """
+        return _namespace_GVF1O('GVF1_0105')
+
+    @classmethod
+    def platform_class(cls):
+        """Type of technology used to gather the variant data. Unrestricted range due to open specification.
+        (cls, GVF1_0106)
+        """
+        return _namespace_GVF1O('GVF1_0106')
+
+    @classmethod
+    def platform_name(cls):
+        """Sequencer or other machine used to collect the variant data. Unrestricted range due to open specification.
+        (cls, GVF1_0108)
+        """
+        return _namespace_GVF1O('GVF1_0108')
+
+    @classmethod
+    def read_length(cls):
+        """Undocumented in GVF specification.
+        (cls, GVF1_0132)
+        """
+        return _namespace_GVF1O('GVF1_0132')
+
+    @classmethod
+    def read_pair_span(cls):
+        """Undocumented in GVF specification.
+        (cls, GVF1_0133)
+        """
+        return _namespace_GVF1O('GVF1_0133')
+
+    @classmethod
+    def average_coverage(cls):
+        """Undocumented in GVF specification.
+        (cls, GVF1_0134)
+        """
+        return _namespace_GVF1O('GVF1_0134')
+
+    @classmethod
+    def landmark_properties(cls):
+        """Properties that are directly associated with Landmark class instances.
+        (cls, GVF1_0136)
+        """
+        return _namespace_GVF1O('GVF1_0136')
+
+    @classmethod
+    def file_version(cls):
+        """Version of the GVF file that this set stems from.
+        (cls, GVF1_0149)
+        """
+        return _namespace_GVF1O('GVF1_0149')
+
+    @classmethod
+    def structuredattribute_properties(cls):
+        """Properties that are directly associated with StructuredAttribute class instances.
+        (cls, GVF1_0153)
+        """
+        return _namespace_GVF1O('GVF1_0153')
+
+    @classmethod
+    def sequence(cls):
+        """Either:
+            Sequence associated with this feature, if it has been specified using a FASTA string.
+            (cls, GVF1_0156)
+        Or:
+            Sequence associated with this feature, if it has been specified using a FASTA string.
+            (GVF1_0157)
+        """
+        return [ _namespace_GVF1O('GVF1_0156'), _namespace_GVF1O('GVF1_0157') ]
+
     @classmethod
     def Set(cls):
         """Set of genomic sequence features, whose identifiers are unique within the set.
@@ -479,6 +699,9 @@ class GVF1O:
 
     @classmethod
     def Attribute(cls):
+        """Representation of attribute tag/value pairs that are not covered by specific classes such as Effect or Variant.
+        (cls, GVF1_0003)
+        """
         return _namespace_GVF1O('GVF1_0003')
 
     @classmethod
@@ -488,13 +711,6 @@ class GVF1O:
         """
         return _namespace_GVF1O('GVF1_0016')
 
-    @classmethod
-    def DBXRef(cls):
-        """A class describing relationships between features and external databases.
-        (cls, GVF1_0028)
-        """
-        return _namespace_GVF1O('GVF1_0028')
-
     @classmethod
     def Variant(cls):
         """Describing specific alterations of a feature.
@@ -551,6 +767,76 @@ class GVF1O:
         """
         return _namespace_GVF1O('GVF1_0088')
 
+    @classmethod
+    def TechnologyPlatform(cls):
+        """Details about the sequencing/microarray technology used to gather the data in a set.
+        (cls, GVF1_0097)
+        """
+        return _namespace_GVF1O('GVF1_0097')
+
+    @classmethod
+    def DataSource(cls):
+        """Provides information about the source of the data. For example, it can link out to actual sequences associated with the Feature individuals in a Set.
+        (cls, GVF1_0098)
+        """
+        return _namespace_GVF1O('GVF1_0098')
+
+    @classmethod
+    def Method(cls):
+        """Information about the used scoring algorithm or method.
+        (cls, GVF1_0099)
+        """
+        return _namespace_GVF1O('GVF1_0099')
+
+    @classmethod
+    def PhenotypeDescription(cls):
+        """Additional information about an individual's phenotype.
+        (cls, GVF1_0100)
+        """
+        return _namespace_GVF1O('GVF1_0100')
+
+    @classmethod
+    def ReadType(cls):
+        """Type of reads obtained for a given technology platform.
+        (cls, GVF1_0109)
+        """
+        return _namespace_GVF1O('GVF1_0109')
+
+    @classmethod
+    def DataType(cls):
+        """Determines the datatype of a variant sequence.
+        (cls, GVF1_0114)
+        """
+        return _namespace_GVF1O('GVF1_0114')
+
+    @classmethod
+    def Landmark(cls):
+        """A landmark that establishes the coordinate system for features.
+        (cls, GVF1_0135)
+        """
+        return _namespace_GVF1O('GVF1_0135')
+
+    @classmethod
+    def Sex(cls):
+        """For single individual sets, the Sex class' OWL-individuals can be used to specify the sex of the sequenced (cls, real-life) individuals.
+        (GVF1_0140)
+        """
+        return _namespace_GVF1O('GVF1_0140')
+
+    @classmethod
+    def GenomicSource(cls):
+        """An enumerated class for determining the genomic source (cls, cell type) of sequenced data.
+        (GVF1_0141)
+        """
+        return _namespace_GVF1O('GVF1_0141')
+
+    @classmethod
+    def StructuredAttribute(cls):
+        """Representation of attribute tag/value pairs that are specific to particular structured attributes, but which are not covered by the GVF specification.
+        (cls, GVF1_0151)
+        """
+        return _namespace_GVF1O('GVF1_0151')
+
     @classmethod
     def Positive(cls):
         """Location on the positive (cls, forward) strand.
@@ -600,12 +886,91 @@ class GVF1O:
         """
         return _namespace_GVF1O('GVF1_0087')
 
+    @classmethod
+    def Fragment(cls):
+        """Denotes reads that are fragments.
+        (cls, GVF1_0110)
+        """
+        return _namespace_GVF1O('GVF1_0110')
+
+    @classmethod
+    def Pair(cls):
+        """Denotes reads that are pairs.
+        (cls, GVF1_0111)
+        """
+        return _namespace_GVF1O('GVF1_0111')
+
+    @classmethod
+    def DNASequence(cls):
+        """Denotes a DNA sequence.
+        (cls, GVF1_0115)
+        """
+        return _namespace_GVF1O('GVF1_0115')
+
+    @classmethod
+    def RNASequence(cls):
+        """Denotes an RNA sequence.
+        (cls, GVF1_0116)
+        """
+        return _namespace_GVF1O('GVF1_0116')
+
+    @classmethod
+    def DNAMicroarray(cls):
+        """Denotes a DNA microarray probe.
+        (cls, GVF1_0117)
+        """
+        return _namespace_GVF1O('GVF1_0117')
+
+    @classmethod
+    def ArrayComparativeGenomicHybridization(cls):
+        """Denotes an array-comparative genomic hybridization.
+        (cls, GVF1_0118)
+        """
+        return _namespace_GVF1O('GVF1_0118')
+
+    @classmethod
+    def Female(cls):
+        """Denotes that a Set contains features of a female.
+        (cls, GVF1_0142)
+        """
+        return _namespace_GVF1O('GVF1_0142')
+
+    @classmethod
+    def Male(cls):
+        """Denotes that a Set contains features of a male.
+        (cls, GVF1_0143)
+        """
+        return _namespace_GVF1O('GVF1_0143')
+
+    @classmethod
+    def Prenatal(cls):
+        """Denotes that a set contains features of prenatal cells.
+        (cls, GVF1_0144)
+        """
+        return _namespace_GVF1O('GVF1_0144')
+
+    @classmethod
+    def Germline(cls):
+        """Denotes that a set contains features of germline cells.
+        (cls, GVF1_0145)
+        """
+        return _namespace_GVF1O('GVF1_0145')
+
+    @classmethod
+    def Somatic(cls):
+        """Denotes that a set contains features of somatic cells.
+        (cls, GVF1_0146)
+        """
+        return _namespace_GVF1O('GVF1_0146')
+
     @classmethod
     def is_object_property(cls, uri):
         """Determines whether the given URI is an object property.
         
         uri -- URI that is tested for being an object property
         """
+        if uri == _namespace_GVF1O('GVF1_0004'):
+            return True
         if uri == _namespace_GVF1O('GVF1_0010'):
             return True
         if uri == _namespace_GVF1O('GVF1_0012'):
@@ -630,8 +995,6 @@ class GVF1O:
             return True
         if uri == _namespace_GVF1O('GVF1_0043'):
             return True
-        if uri == _namespace_GVF1O('GVF1_0044'):
-            return True
         if uri == _namespace_GVF1O('GVF1_0046'):
             return True
         if uri == _namespace_GVF1O('GVF1_0047'):
@@ -650,6 +1013,8 @@ class GVF1O:
             return True
         if uri == _namespace_GVF1O('GVF1_0070'):
             return True
+        if uri == _namespace_GVF1O('GVF1_0072'):
+            return True
         if uri == _namespace_GVF1O('GVF1_0075'):
             return True
         if uri == _namespace_GVF1O('GVF1_0078'):
@@ -666,6 +1031,50 @@ class GVF1O:
             return True
         if uri == _namespace_GVF1O('GVF1_0091'):
             return True
+        if uri == _namespace_GVF1O('GVF1_0102'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0103'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0104'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0112'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0119'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0120'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0121'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0122'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0123'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0124'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0125'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0126'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0127'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0128'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0129'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0130'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0131'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0147'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0148'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0150'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0152'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0155'):
+            return True
         return False
 
     @classmethod
@@ -674,8 +1083,6 @@ class GVF1O:
         
         uri -- URI that is tested for being a datatype property
         """
-        if uri == _namespace_GVF1O('GVF1_0004'):
-            return True
         if uri == _namespace_GVF1O('GVF1_0005'):
             return True
         if uri == _namespace_GVF1O('GVF1_0006'):
@@ -698,10 +1105,6 @@ class GVF1O:
             return True
         if uri == _namespace_GVF1O('GVF1_0027'):
             return True
-        if uri == _namespace_GVF1O('GVF1_0029'):
-            return True
-        if uri == _namespace_GVF1O('GVF1_0030'):
-            return True
         if uri == _namespace_GVF1O('GVF1_0031'):
             return True
         if uri == _namespace_GVF1O('GVF1_0032'):
@@ -710,6 +1113,8 @@ class GVF1O:
             return True
         if uri == _namespace_GVF1O('GVF1_0039'):
             return True
+        if uri == _namespace_GVF1O('GVF1_0044'):
+            return True
         if uri == _namespace_GVF1O('GVF1_0048'):
             return True
         if uri == _namespace_GVF1O('GVF1_0049'):
@@ -730,8 +1135,6 @@ class GVF1O:
             return True
         if uri == _namespace_GVF1O('GVF1_0061'):
             return True
-        if uri == _namespace_GVF1O('GVF1_0062'):
-            return True
         if uri == _namespace_GVF1O('GVF1_0063'):
             return True
         if uri == _namespace_GVF1O('GVF1_0064'):
@@ -740,8 +1143,6 @@ class GVF1O:
             return True
         if uri == _namespace_GVF1O('GVF1_0071'):
             return True
-        if uri == _namespace_GVF1O('GVF1_0072'):
-            return True
         if uri == _namespace_GVF1O('GVF1_0073'):
             return True
         if uri == _namespace_GVF1O('GVF1_0074'):
@@ -762,6 +1163,46 @@ class GVF1O:
             return True
         if uri == _namespace_GVF1O('GVF1_0095'):
             return True
+        if uri == _namespace_GVF1O('GVF1_0096'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0101'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0105'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0106'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0107'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0108'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0113'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0132'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0133'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0134'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0136'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0137'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0138'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0139'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0149'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0153'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0154'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0156'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0157'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0158'):
+            return True
         return False
 
     @classmethod
@@ -778,8 +1219,6 @@ class GVF1O:
             return True
         if uri == _namespace_GVF1O('GVF1_0016'):
             return True
-        if uri == _namespace_GVF1O('GVF1_0028'):
-            return True
         if uri == _namespace_GVF1O('GVF1_0033'):
             return True
         if uri == _namespace_GVF1O('GVF1_0035'):
@@ -796,6 +1235,26 @@ class GVF1O:
             return True
         if uri == _namespace_GVF1O('GVF1_0088'):
             return True
+        if uri == _namespace_GVF1O('GVF1_0097'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0098'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0099'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0100'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0109'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0114'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0135'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0140'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0141'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0151'):
+            return True
         return False
 
     @classmethod
@@ -818,6 +1277,28 @@ class GVF1O:
             return True
         if uri == _namespace_GVF1O('GVF1_0087'):
             return True
+        if uri == _namespace_GVF1O('GVF1_0110'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0111'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0115'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0116'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0117'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0118'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0142'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0143'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0144'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0145'):
+            return True
+        if uri == _namespace_GVF1O('GVF1_0146'):
+            return True
         return False
 
     @classmethod
@@ -842,5 +1323,5 @@ class GVF1O:
             return cls.has_parent(cls.__parent_properties[uri], parent)
         return False
 
-    __parent_properties = { _namespace_GVF1O('GVF1_0010') : _namespace_GVF1O('GVF1_0066') , _namespace_GVF1O('GVF1_0012') : _namespace_GVF1O('GVF1_0066') , _namespace_GVF1O('GVF1_0014') : _namespace_GVF1O('GVF1_0066') , _namespace_GVF1O('GVF1_0015') : _namespace_GVF1O('GVF1_0068') , _namespace_GVF1O('GVF1_0021') : _namespace_GVF1O('GVF1_0066') , _namespace_GVF1O('GVF1_0023') : _namespace_GVF1O('GVF1_0068') , _namespace_GVF1O('GVF1_0034') : _namespace_GVF1O('GVF1_0066') , _namespace_GVF1O('GVF1_0036') : _namespace_GVF1O('GVF1_0066') , _namespace_GVF1O('GVF1_0038') : _namespace_GVF1O('GVF1_0069') , _namespace_GVF1O('GVF1_0041') : _namespace_GVF1O('GVF1_0069') , _namespace_GVF1O('GVF1_0042') : _namespace_GVF1O('GVF1_0070') , _namespace_GVF1O('GVF1_0043') : _namespace_GVF1O('GVF1_0070') , _namespace_GVF1O('GVF1_0044') : _namespace_GVF1O('GVF1_0070') , _namespace_GVF1O('GVF1_0046') : _namespace_GVF1O('GVF1_0070') , _namespace_GVF1O('GVF1_0047') : _namespace_GVF1O('GVF1_0070') , _namespace_GVF1O('GVF1_0051') : _namespace_GVF1O('GVF1_0067') , _namespace_GVF1O('GVF1_0053') : _namespace_GVF1O('GVF1_0069') , _namespace_GVF1O('GVF1_0078') : _namespace_GVF1O('GVF1_0066') , _namespace_GVF1O('GVF1_0079') : _namespace_GVF1O('GVF1_0075') , _namespace_GVF1O('GVF1_0080') : _namespace_GVF1O('GVF1_0066') , _namespace_GVF1O('GVF1_0083') : _namespace_GVF1O('GVF1_0075') , _namespace_GVF1O('GVF1_0090') : _namespace_GVF1O('GVF1_0089') , _namespace_GVF1O('GVF1_0091') : _namespace_GVF1O('GVF1_0089') , _namespace_GVF1O('GVF1_0004') : _namespace_GVF1O('GVF1_0059') , _namespace_GVF1O('GVF1_0005') : _namespace_GVF1O('GVF1_0059') , _namespace_GVF1O('GVF1_0006') : _namespace_GVF1O('GVF1_0059') , _namespace_GVF1O('GVF1_0007') : _namespace_GVF1O('GVF1_0059') , _namespace_GVF1O('GVF1_0008') : _namespace_GVF1O('GVF1_0059') , _namespace_GVF1O('GVF1_0009') : _namespace_GVF1O('GVF1_0059') , _namespace_GVF1O('GVF1_0013') : _namespace_GVF1O('GVF1_0064') , _namespace_GVF1O('GVF1_0022') : _namespace_GVF1O('GVF1_0063') , _namespace_GVF1O('GVF1_0024') : _namespace_GVF1O('GVF1_0063') , _namespace_GVF1O('GVF1_0025') : _namespace_GVF1O('GVF1_0060') , _namespace_GVF1O('GVF1_0026') : _namespace_GVF1O('GVF1_0059') , _namespace_GVF1O('GVF1_0027') : _namespace_GVF1O('GVF1_0059') , _namespace_GVF1O('GVF1_0029') : _namespace_GVF1O('GVF1_0062') , _namespace_GVF1O('GVF1_0030') : _namespace_GVF1O('GVF1_0062') , _namespace_GVF1O('GVF1_0031') : _namespace_GVF1O('GVF1_0059') , _namespace_GVF1O('GVF1_0032') : _namespace_GVF1O('GVF1_0060') , _namespace_GVF1O('GVF1_0037') : _namespace_GVF1O('GVF1_0065') , _namespace_GVF1O('GVF1_0039') : _namespace_GVF1O('GVF1_0060') , _namespace_GVF1O('GVF1_0048') : _namespace_GVF1O('GVF1_0061') , _namespace_GVF1O('GVF1_0049') : _namespace_GVF1O('GVF1_0061') , _namespace_GVF1O('GVF1_0050') : _namespace_GVF1O('GVF1_0060') , _namespace_GVF1O('GVF1_0054') : _namespace_GVF1O('GVF1_0060') , _namespace_GVF1O('GVF1_0055') : _namespace_GVF1O('GVF1_0059') , _namespace_GVF1O('GVF1_0056') : _namespace_GVF1O('GVF1_0060') , _namespace_GVF1O('GVF1_0057') : _namespace_GVF1O('GVF1_0059') , _namespace_GVF1O('GVF1_0072') : _namespace_GVF1O('GVF1_0071') , _namespace_GVF1O('GVF1_0073') : _namespace_GVF1O('GVF1_0071') , _namespace_GVF1O('GVF1_0074') : _namespace_GVF1O('GVF1_0071') , _namespace_GVF1O('GVF1_0076') : _namespace_GVF1O('GVF1_0059') , _namespace_GVF1O('GVF1_0077') : _namespace_GVF1O('GVF1_0059') , _namespace_GVF1O('GVF1_0081') : _namespace_GVF1O('GVF1_0063') , _namespace_GVF1O('GVF1_0082') : _namespace_GVF1O('GVF1_0063') , _namespace_GVF1O('GVF1_0093') : _namespace_GVF1O('GVF1_0092') , _namespace_GVF1O('GVF1_0094') : _namespace_GVF1O('GVF1_0092') , _namespace_GVF1O('GVF1_0095') : _namespace_GVF1O('GVF1_0092') , _namespace_GVF1O('GVF1_0088') : _namespace_GVF1O('http://www.w3.org/2002/07/owl#Thing') }
+    __parent_properties = { _namespace_GVF1O('GVF1_0004') : _namespace_GVF1O('GVF1_0066') , _namespace_GVF1O('GVF1_0010') : _namespace_GVF1O('GVF1_0066') , _namespace_GVF1O('GVF1_0012') : _namespace_GVF1O('GVF1_0066') , _namespace_GVF1O('GVF1_0014') : _namespace_GVF1O('GVF1_0066') , _namespace_GVF1O('GVF1_0015') : _namespace_GVF1O('GVF1_0068') , _namespace_GVF1O('GVF1_0021') : _namespace_GVF1O('GVF1_0066') , _namespace_GVF1O('GVF1_0023') : _namespace_GVF1O('GVF1_0068') , _namespace_GVF1O('GVF1_0034') : _namespace_GVF1O('GVF1_0066') , _namespace_GVF1O('GVF1_0036') : _namespace_GVF1O('GVF1_0066') , _namespace_GVF1O('GVF1_0038') : _namespace_GVF1O('GVF1_0069') , _namespace_GVF1O('GVF1_0041') : _namespace_GVF1O('GVF1_0069') , _namespace_GVF1O('GVF1_0042') : _namespace_GVF1O('GVF1_0070') , _namespace_GVF1O('GVF1_0043') : _namespace_GVF1O('GVF1_0070') , _namespace_GVF1O('GVF1_0046') : _namespace_GVF1O('GVF1_0070') , _namespace_GVF1O('GVF1_0047') : _namespace_GVF1O('GVF1_0070') , _namespace_GVF1O('GVF1_0051') : _namespace_GVF1O('GVF1_0067') , _namespace_GVF1O('GVF1_0053') : _namespace_GVF1O('GVF1_0069') , _namespace_GVF1O('GVF1_0072') : _namespace_GVF1O('GVF1_0075') , _namespace_GVF1O('GVF1_0078') : _namespace_GVF1O('GVF1_0066') , _namespace_GVF1O('GVF1_0079') : _namespace_GVF1O('GVF1_0075') , _namespace_GVF1O('GVF1_0080') : _namespace_GVF1O('GVF1_0066') , _namespace_GVF1O('GVF1_0083') : _namespace_GVF1O('GVF1_0075') , _namespace_GVF1O('GVF1_0090') : _namespace_GVF1O('GVF1_0089') , _namespace_GVF1O('GVF1_0091') : _namespace_GVF1O('GVF1_0089') , _namespace_GVF1O('GVF1_0102') : _namespace_GVF1O('GVF1_0112') , _namespace_GVF1O('GVF1_0103') : _namespace_GVF1O('GVF1_0112') , _namespace_GVF1O('GVF1_0104') : _namespace_GVF1O('GVF1_0112') , _namespace_GVF1O('GVF1_0119') : _namespace_GVF1O('GVF1_0102') , _namespace_GVF1O('GVF1_0120') : _namespace_GVF1O('GVF1_0103') , _namespace_GVF1O('GVF1_0121') : _namespace_GVF1O('GVF1_0066') , _namespace_GVF1O('GVF1_0122') : _namespace_GVF1O('GVF1_0066') , _namespace_GVF1O('GVF1_0123') : _namespace_GVF1O('GVF1_0066') , _namespace_GVF1O('GVF1_0124') : _namespace_GVF1O('GVF1_0066') , _namespace_GVF1O('GVF1_0125') : _namespace_GVF1O('GVF1_0068') , _namespace_GVF1O('GVF1_0126') : _namespace_GVF1O('GVF1_0070') , _namespace_GVF1O('GVF1_0127') : _namespace_GVF1O('GVF1_0075') , _namespace_GVF1O('GVF1_0129') : _namespace_GVF1O('GVF1_0128') , _namespace_GVF1O('GVF1_0130') : _namespace_GVF1O('GVF1_0089') , _namespace_GVF1O('GVF1_0131') : _namespace_GVF1O('GVF1_0069') , _namespace_GVF1O('GVF1_0147') : _namespace_GVF1O('GVF1_0068') , _namespace_GVF1O('GVF1_0148') : _namespace_GVF1O('GVF1_0068') , _namespace_GVF1O('GVF1_0150') : _namespace_GVF1O('GVF1_0068') , _namespace_GVF1O('GVF1_0152') : _namespace_GVF1O('GVF1_0112') , _namespace_GVF1O('GVF1_0155') : _namespace_GVF1O('GVF1_0066') , _namespace_GVF1O('GVF1_0005') : _namespace_GVF1O('GVF1_0059') , _namespace_GVF1O('GVF1_0006') : _namespace_GVF1O('GVF1_0059') , _namespace_GVF1O('GVF1_0007') : _namespace_GVF1O('GVF1_0059') , _namespace_GVF1O('GVF1_0008') : _namespace_GVF1O('GVF1_0059') , _namespace_GVF1O('GVF1_0009') : _namespace_GVF1O('GVF1_0059') , _namespace_GVF1O('GVF1_0013') : _namespace_GVF1O('GVF1_0064') , _namespace_GVF1O('GVF1_0022') : _namespace_GVF1O('GVF1_0063') , _namespace_GVF1O('GVF1_0024') : _namespace_GVF1O('GVF1_0063') , _namespace_GVF1O('GVF1_0025') : _namespace_GVF1O('GVF1_0060') , _namespace_GVF1O('GVF1_0026') : _namespace_GVF1O('GVF1_0059') , _namespace_GVF1O('GVF1_0027') : _namespace_GVF1O('GVF1_0059') , _namespace_GVF1O('GVF1_0031') : _namespace_GVF1O('GVF1_0059') , _namespace_GVF1O('GVF1_0032') : _namespace_GVF1O('GVF1_0060') , _namespace_GVF1O('GVF1_0037') : _namespace_GVF1O('GVF1_0065') , _namespace_GVF1O('GVF1_0039') : _namespace_GVF1O('GVF1_0060') , _namespace_GVF1O('GVF1_0044') : _namespace_GVF1O('GVF1_0158') , _namespace_GVF1O('GVF1_0048') : _namespace_GVF1O('GVF1_0061') , _namespace_GVF1O('GVF1_0049') : _namespace_GVF1O('GVF1_0061') , _namespace_GVF1O('GVF1_0050') : _namespace_GVF1O('GVF1_0060') , _namespace_GVF1O('GVF1_0054') : _namespace_GVF1O('GVF1_0060') , _namespace_GVF1O('GVF1_0055') : _namespace_GVF1O('GVF1_0059') , _namespace_GVF1O('GVF1_0056') : _namespace_GVF1O('GVF1_0060') , _namespace_GVF1O('GVF1_0057') : _namespace_GVF1O('GVF1_0059') , _namespace_GVF1O('GVF1_0073') : _namespace_GVF1O('GVF1_0071') , _namespace_GVF1O('GVF1_0074') : _namespace_GVF1O('GVF1_0071') , _namespace_GVF1O('GVF1_0076') : _namespace_GVF1O('GVF1_0059') , _namespace_GVF1O('GVF1_0077') : _namespace_GVF1O('GVF1_0059') , _namespace_GVF1O('GVF1_0081') : _namespace_GVF1O('GVF1_0063') , _namespace_GVF1O('GVF1_0082') : _namespace_GVF1O('GVF1_0063') , _namespace_GVF1O('GVF1_0093') : _namespace_GVF1O('GVF1_0092') , _namespace_GVF1O('GVF1_0094') : _namespace_GVF1O('GVF1_0092') , _namespace_GVF1O('GVF1_0095') : _namespace_GVF1O('GVF1_0092') , _namespace_GVF1O('GVF1_0096') : _namespace_GVF1O('GVF1_0059') , _namespace_GVF1O('GVF1_0101') : _namespace_GVF1O('GVF1_0059') , _namespace_GVF1O('GVF1_0105') : _namespace_GVF1O('GVF1_0113') , _namespace_GVF1O('GVF1_0106') : _namespace_GVF1O('GVF1_0107') , _namespace_GVF1O('GVF1_0107') : _namespace_GVF1O('GVF1_0113') , _namespace_GVF1O('GVF1_0108') : _namespace_GVF1O('GVF1_0107') , _namespace_GVF1O('GVF1_0132') : _namespace_GVF1O('GVF1_0107') , _namespace_GVF1O('GVF1_0133') : _namespace_GVF1O('GVF1_0107') , _namespace_GVF1O('GVF1_0134') : _namespace_GVF1O('GVF1_0107') , _namespace_GVF1O('GVF1_0137') : _namespace_GVF1O('GVF1_0136') , _namespace_GVF1O('GVF1_0138') : _namespace_GVF1O('GVF1_0136') , _namespace_GVF1O('GVF1_0139') : _namespace_GVF1O('GVF1_0136') , _namespace_GVF1O('GVF1_0149') : _namespace_GVF1O('GVF1_0063') , _namespace_GVF1O('GVF1_0154') : _namespace_GVF1O('GVF1_0153') , _namespace_GVF1O('GVF1_0156') : _namespace_GVF1O('GVF1_0059') , _namespace_GVF1O('GVF1_0157') : _namespace_GVF1O('GVF1_0136') , _namespace_GVF1O('GVF1_0088') : _namespace_GVF1O('http://www.w3.org/2002/07/owl#Thing') , _namespace_GVF1O('GVF1_0151') : _namespace_GVF1O('http://www.w3.org/2002/07/owl#Thing') }