bio-ucsc-api 0.1.0 → 0.2.0

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Files changed (5113) hide show
  1. data/Gemfile +1 -0
  2. data/Gemfile.lock +14 -12
  3. data/README.rdoc +24 -3
  4. data/Rakefile +1 -1
  5. data/VERSION +1 -1
  6. data/bio-ucsc-api.gemspec +134 -4910
  7. data/lib/bio-ucsc-api.rb +1 -1
  8. data/lib/bio-ucsc.rb +24 -5
  9. data/lib/bio-ucsc/ce6.rb +39 -0
  10. data/lib/bio-ucsc/ce6/chaincaejap1.rb +81 -0
  11. data/lib/bio-ucsc/ce6/chaincaejap1link.rb +82 -0
  12. data/lib/bio-ucsc/ce6/chaincaepb2.rb +81 -0
  13. data/lib/bio-ucsc/ce6/chaincaepb2link.rb +82 -0
  14. data/lib/bio-ucsc/ce6/chaincaerem3.rb +81 -0
  15. data/lib/bio-ucsc/ce6/chaincaerem3link.rb +82 -0
  16. data/lib/bio-ucsc/ce6/chaincb3.rb +81 -0
  17. data/lib/bio-ucsc/ce6/chaincb3link.rb +82 -0
  18. data/lib/bio-ucsc/ce6/chainpripac1.rb +81 -0
  19. data/lib/bio-ucsc/ce6/chainpripac1link.rb +82 -0
  20. data/lib/bio-ucsc/ce6/chainself.rb +81 -0
  21. data/lib/bio-ucsc/ce6/chainselflink.rb +82 -0
  22. data/lib/bio-ucsc/ce6/db_connection.rb +56 -0
  23. data/lib/bio-ucsc/ce6/est.rb +81 -0
  24. data/lib/bio-ucsc/ce6/gap.rb +81 -0
  25. data/lib/bio-ucsc/ce6/gold.rb +81 -0
  26. data/lib/bio-ucsc/ce6/intronest.rb +81 -0
  27. data/lib/bio-ucsc/ce6/mrna.rb +81 -0
  28. data/lib/bio-ucsc/ce6/rmsk.rb +81 -0
  29. data/lib/bio-ucsc/ce6/t25mersrepeats.rb +55 -0
  30. data/lib/bio-ucsc/dm3.rb +48 -0
  31. data/lib/bio-ucsc/dm3/chainanogam1.rb +81 -0
  32. data/lib/bio-ucsc/dm3/chainanogam1link.rb +81 -0
  33. data/lib/bio-ucsc/dm3/chainapimel3.rb +81 -0
  34. data/lib/bio-ucsc/dm3/chainapimel3link.rb +81 -0
  35. data/lib/bio-ucsc/dm3/chaindp3.rb +81 -0
  36. data/lib/bio-ucsc/dm3/chaindp3link.rb +81 -0
  37. data/lib/bio-ucsc/dm3/chaindroana2.rb +81 -0
  38. data/lib/bio-ucsc/dm3/chaindroana2link.rb +81 -0
  39. data/lib/bio-ucsc/dm3/chaindroere1.rb +81 -0
  40. data/lib/bio-ucsc/dm3/chaindroere1link.rb +81 -0
  41. data/lib/bio-ucsc/dm3/chaindroper1.rb +81 -0
  42. data/lib/bio-ucsc/dm3/chaindroper1link.rb +81 -0
  43. data/lib/bio-ucsc/dm3/chaindrosec1.rb +81 -0
  44. data/lib/bio-ucsc/dm3/chaindrosec1link.rb +81 -0
  45. data/lib/bio-ucsc/dm3/chaindrosim1.rb +81 -0
  46. data/lib/bio-ucsc/dm3/chaindrosim1link.rb +81 -0
  47. data/lib/bio-ucsc/dm3/chaindroyak2.rb +81 -0
  48. data/lib/bio-ucsc/dm3/chaindroyak2link.rb +81 -0
  49. data/lib/bio-ucsc/dm3/db_connection.rb +56 -0
  50. data/lib/bio-ucsc/dm3/est.rb +81 -0
  51. data/lib/bio-ucsc/dm3/gap.rb +81 -0
  52. data/lib/bio-ucsc/dm3/gold.rb +81 -0
  53. data/lib/bio-ucsc/dm3/intronest.rb +81 -0
  54. data/lib/bio-ucsc/dm3/mrna.rb +81 -0
  55. data/lib/bio-ucsc/dm3/rmsk.rb +81 -0
  56. data/lib/bio-ucsc/go.rb +19 -0
  57. data/lib/bio-ucsc/go/db_connection.rb +56 -0
  58. data/lib/bio-ucsc/hg18.rb +27 -3839
  59. data/lib/bio-ucsc/hg18/chainanocar1.rb +62 -30
  60. data/lib/bio-ucsc/hg18/chainbostau4.rb +61 -29
  61. data/lib/bio-ucsc/hg18/chainbraflo1.rb +61 -29
  62. data/lib/bio-ucsc/hg18/chaincaljac1.rb +62 -26
  63. data/lib/bio-ucsc/hg18/chaincanfam2.rb +61 -29
  64. data/lib/bio-ucsc/hg18/chaincavpor3.rb +61 -29
  65. data/lib/bio-ucsc/hg18/chaindanrer5.rb +61 -29
  66. data/lib/bio-ucsc/hg18/chainequcab1.rb +61 -29
  67. data/lib/bio-ucsc/hg18/chainfelcat3.rb +61 -29
  68. data/lib/bio-ucsc/hg18/chainfr2.rb +61 -29
  69. data/lib/bio-ucsc/hg18/chaingalgal3.rb +62 -30
  70. data/lib/bio-ucsc/hg18/chaingasacu1.rb +62 -30
  71. data/lib/bio-ucsc/hg18/chainmm9.rb +61 -29
  72. data/lib/bio-ucsc/hg18/chainmondom4.rb +62 -30
  73. data/lib/bio-ucsc/hg18/chainornana1.rb +61 -29
  74. data/lib/bio-ucsc/hg18/chainorylat2.rb +62 -30
  75. data/lib/bio-ucsc/hg18/chainpantro2.rb +61 -24
  76. data/lib/bio-ucsc/hg18/chainpetmar1.rb +61 -29
  77. data/lib/bio-ucsc/hg18/chainponabe2.rb +60 -23
  78. data/lib/bio-ucsc/hg18/chainrhemac2.rb +64 -32
  79. data/lib/bio-ucsc/hg18/chainrn4.rb +61 -29
  80. data/lib/bio-ucsc/hg18/chainself.rb +61 -23
  81. data/lib/bio-ucsc/hg18/chainstrpur2.rb +61 -25
  82. data/lib/bio-ucsc/hg18/chaintaegut1.rb +62 -30
  83. data/lib/bio-ucsc/hg18/chaintetnig2.rb +79 -0
  84. data/lib/bio-ucsc/hg18/chainxentro2.rb +62 -30
  85. data/lib/bio-ucsc/hg18/db_connection.rb +7 -7
  86. data/lib/bio-ucsc/hg18/gap.rb +61 -31
  87. data/lib/bio-ucsc/hg18/gold.rb +61 -34
  88. data/lib/bio-ucsc/hg18/intronest.rb +61 -29
  89. data/lib/bio-ucsc/hg18/rmsk.rb +56 -34
  90. data/lib/bio-ucsc/hg18/rmskrm327.rb +60 -29
  91. data/lib/bio-ucsc/hg19.rb +10 -1767
  92. data/lib/bio-ucsc/hg19/db_connection.rb +7 -7
  93. data/lib/bio-ucsc/hg19/description.rb +5 -13
  94. data/lib/bio-ucsc/hg19/gbcdnainfo.rb +4 -17
  95. data/lib/bio-ucsc/hgfixed.rb +19 -0
  96. data/lib/bio-ucsc/hgfixed/db_connection.rb +56 -0
  97. data/lib/bio-ucsc/mm9.rb +62 -0
  98. data/lib/bio-ucsc/mm9/chainanocar1.rb +79 -0
  99. data/lib/bio-ucsc/mm9/chainanocar1link.rb +79 -0
  100. data/lib/bio-ucsc/mm9/chainbostau4.rb +79 -0
  101. data/lib/bio-ucsc/mm9/chainbostau4link.rb +79 -0
  102. data/lib/bio-ucsc/mm9/chainbraflo1.rb +82 -0
  103. data/lib/bio-ucsc/mm9/chainbraflo1link.rb +82 -0
  104. data/lib/bio-ucsc/mm9/chaincanfam2.rb +82 -0
  105. data/lib/bio-ucsc/mm9/chaincanfam2link.rb +82 -0
  106. data/lib/bio-ucsc/mm9/chaincavpor3.rb +81 -0
  107. data/lib/bio-ucsc/mm9/chaincavpor3link.rb +81 -0
  108. data/lib/bio-ucsc/mm9/chainfr2.rb +81 -0
  109. data/lib/bio-ucsc/mm9/chainfr2link.rb +81 -0
  110. data/lib/bio-ucsc/mm9/chaingalgal3.rb +81 -0
  111. data/lib/bio-ucsc/mm9/chaingalgal3link.rb +81 -0
  112. data/lib/bio-ucsc/mm9/chaingasacu1.rb +81 -0
  113. data/lib/bio-ucsc/mm9/chaingasacu1link.rb +81 -0
  114. data/lib/bio-ucsc/mm9/chainornana1.rb +81 -0
  115. data/lib/bio-ucsc/mm9/chainornana1link.rb +81 -0
  116. data/lib/bio-ucsc/mm9/chainorylat2.rb +81 -0
  117. data/lib/bio-ucsc/mm9/chainorylat2link.rb +81 -0
  118. data/lib/bio-ucsc/mm9/chainpantro2.rb +81 -0
  119. data/lib/bio-ucsc/mm9/chainpantro2link.rb +82 -0
  120. data/lib/bio-ucsc/mm9/chainpetmar1.rb +81 -0
  121. data/lib/bio-ucsc/mm9/chainpetmar1link.rb +81 -0
  122. data/lib/bio-ucsc/mm9/chainponabe2.rb +81 -0
  123. data/lib/bio-ucsc/mm9/chainponabe2link.rb +81 -0
  124. data/lib/bio-ucsc/mm9/chainrhemac2.rb +81 -0
  125. data/lib/bio-ucsc/mm9/chainrhemac2link.rb +81 -0
  126. data/lib/bio-ucsc/mm9/chainrn4.rb +81 -0
  127. data/lib/bio-ucsc/mm9/chainrn4link.rb +81 -0
  128. data/lib/bio-ucsc/mm9/chainxentro2.rb +81 -0
  129. data/lib/bio-ucsc/mm9/chainxentro2link.rb +81 -0
  130. data/lib/bio-ucsc/mm9/db_connection.rb +56 -0
  131. data/lib/bio-ucsc/mm9/est.rb +81 -0
  132. data/lib/bio-ucsc/mm9/gap.rb +81 -0
  133. data/lib/bio-ucsc/mm9/gold.rb +81 -0
  134. data/lib/bio-ucsc/mm9/intronest.rb +81 -0
  135. data/lib/bio-ucsc/mm9/mrna.rb +81 -0
  136. data/lib/bio-ucsc/mm9/rmsk.rb +78 -0
  137. data/lib/bio-ucsc/proteome.rb +19 -0
  138. data/lib/bio-ucsc/proteome/db_connection.rb +61 -0
  139. data/lib/bio-ucsc/reference.rb +175 -0
  140. data/lib/bio-ucsc/table_class_detector.rb +481 -0
  141. data/lib/bio-ucsc/uniprot.rb +19 -0
  142. data/lib/bio-ucsc/uniprot/db_connection.rb +61 -0
  143. data/lib/bio-ucsc/visigene.rb +19 -0
  144. data/lib/bio-ucsc/visigene/db_connection.rb +56 -0
  145. data/spec/ce6_spec.rb +1238 -0
  146. data/spec/dm3_spec.rb +2484 -0
  147. data/spec/go_spec.rb +210 -0
  148. data/spec/hg18/all_bacends_spec.rb +2 -2
  149. data/spec/hg18/all_fosends_spec.rb +2 -2
  150. data/spec/hg18/chainanocar1_spec.rb +4 -4
  151. data/spec/hg18/chainbostau4_spec.rb +4 -4
  152. data/spec/hg18/chainbraflo1_spec.rb +4 -4
  153. data/spec/hg18/chaincaljac1_spec.rb +4 -4
  154. data/spec/hg18/chaincanfam2_spec.rb +4 -4
  155. data/spec/hg18/chaincavpor3_spec.rb +4 -4
  156. data/spec/hg18/chaindanrer5_spec.rb +4 -4
  157. data/spec/hg18/chainequcab1_spec.rb +4 -4
  158. data/spec/hg18/chainfelcat3_spec.rb +4 -4
  159. data/spec/hg18/chainfr2_spec.rb +4 -4
  160. data/spec/hg18/chaingalgal3_spec.rb +4 -4
  161. data/spec/hg18/chaingasacu1_spec.rb +4 -4
  162. data/spec/hg18/chainmm9_spec.rb +4 -4
  163. data/spec/hg18/chainmondom4_spec.rb +4 -4
  164. data/spec/hg18/chainornana1_spec.rb +4 -4
  165. data/spec/hg18/chainorylat2_spec.rb +4 -4
  166. data/spec/hg18/chainpantro2_spec.rb +4 -4
  167. data/spec/hg18/chainpetmar1_spec.rb +4 -4
  168. data/spec/hg18/chainponabe2_spec.rb +4 -4
  169. data/spec/hg18/chainrhemac2_spec.rb +4 -4
  170. data/spec/hg18/chainrn4_spec.rb +4 -4
  171. data/spec/hg18/chainself_spec.rb +3 -3
  172. data/spec/hg18/chainstrpur2_spec.rb +4 -4
  173. data/spec/hg18/chaintaegut1_spec.rb +4 -4
  174. data/spec/hg18/chaintetnig2_spec.rb +17 -0
  175. data/spec/hg18/chainxentro2_spec.rb +4 -4
  176. data/spec/hg18/gap_spec.rb +3 -3
  177. data/spec/hg18/gold_spec.rb +3 -3
  178. data/spec/hg18/intronest_spec.rb +3 -3
  179. data/spec/hg18/rmsk_spec.rb +9 -0
  180. data/spec/hg18/rmskrm327_spec.rb +11 -0
  181. data/spec/hg18/snp126orthopantro2rhemac2_spec.rb +2 -2
  182. data/spec/hg19/ccdsgene_spec.rb +0 -7
  183. data/spec/hg19/ccdsinfo_spec.rb +1 -1
  184. data/spec/hg19/description_spec.rb +1 -12
  185. data/spec/hg19/ensgene_spec.rb +6 -15
  186. data/spec/hg19/gbcdnainfo_spec.rb +0 -11
  187. data/spec/hg19/hapmapalleleschimp_spec.rb +3 -3
  188. data/spec/hg19/hapmapallelesmacaque_spec.rb +3 -3
  189. data/spec/hg19/hapmapsnpsasw_spec.rb +3 -3
  190. data/spec/hg19/hapmapsnpsceu_spec.rb +3 -3
  191. data/spec/hg19/hapmapsnpschb_spec.rb +3 -3
  192. data/spec/hg19/hapmapsnpschd_spec.rb +3 -3
  193. data/spec/hg19/hapmapsnpsgih_spec.rb +3 -3
  194. data/spec/hg19/hapmapsnpsjpt_spec.rb +3 -3
  195. data/spec/hg19/hapmapsnpslwk_spec.rb +3 -3
  196. data/spec/hg19/hapmapsnpsmex_spec.rb +3 -3
  197. data/spec/hg19/hapmapsnpsmkk_spec.rb +3 -3
  198. data/spec/hg19/hapmapsnpstsi_spec.rb +3 -3
  199. data/spec/hg19/hapmapsnpsyri_spec.rb +3 -3
  200. data/spec/hg19/hgikmc_spec.rb +11 -11
  201. data/spec/hg19/refseqali_spec.rb +0 -8
  202. data/spec/hg19/xenoest_spec.rb +0 -8
  203. data/spec/hg19/xenomrna_spec.rb +0 -8
  204. data/spec/{hg19 → hgCentral}/hgcentral_wikitrack_spec.rb +0 -0
  205. data/spec/{hg18 → hgFixed}/hgfixed_affyexps_spec.rb +0 -0
  206. data/spec/{hg18 → hgFixed}/hgfixed_encoderegioninfo_spec.rb +0 -0
  207. data/spec/{hg19 → hgFixed}/hgfixed_gladhumesotherdata_spec.rb +0 -0
  208. data/spec/{hg19 → hgFixed}/hgfixed_gnfhumanatlas2all_spec.rb +0 -0
  209. data/spec/{hg19 → hgFixed}/hgfixed_gnfhumanatlas2allratio_spec.rb +0 -0
  210. data/spec/{hg19 → hgFixed}/hgfixed_gnfhumanatlas2median_spec.rb +0 -0
  211. data/spec/{hg19 → hgFixed}/hgfixed_gnfhumanatlas2medianexps_spec.rb +0 -0
  212. data/spec/{hg19 → hgFixed}/hgfixed_gnfhumanatlas2medianratio_spec.rb +0 -0
  213. data/spec/{hg18 → hgFixed}/hgfixed_transmapgeneucscgenes_spec.rb +0 -0
  214. data/spec/{hg19 → hgFixed}/hgfixed_transmapsrcmrna_spec.rb +0 -0
  215. data/spec/{hg19 → hgFixed}/hgfixed_transmapsrcrefseq_spec.rb +0 -0
  216. data/spec/{hg19 → hgFixed}/hgfixed_transmapsrcsplicedest_spec.rb +0 -0
  217. data/spec/{hg19 → hgFixed}/hgfixed_transmapsrcucscgenes_spec.rb +0 -0
  218. data/spec/hgfixed_spec.rb +1130 -0
  219. data/spec/mm9_spec.rb +6226 -0
  220. data/spec/proteome_spec.rb +330 -0
  221. data/spec/reference_spec.rb +141 -0
  222. data/spec/uniprot_spec.rb +380 -0
  223. data/spec/visigene_spec.rb +430 -0
  224. metadata +237 -5021
  225. data/lib/bio-ucsc/hg18/acembly.rb +0 -24
  226. data/lib/bio-ucsc/hg18/acemblyclass.rb +0 -24
  227. data/lib/bio-ucsc/hg18/acemblypep.rb +0 -23
  228. data/lib/bio-ucsc/hg18/acescan.rb +0 -23
  229. data/lib/bio-ucsc/hg18/activerecord.rb +0 -325
  230. data/lib/bio-ucsc/hg18/affyallexonprobes.rb +0 -24
  231. data/lib/bio-ucsc/hg18/affyexontissues.rb +0 -24
  232. data/lib/bio-ucsc/hg18/affyexontissuesgs.rb +0 -22
  233. data/lib/bio-ucsc/hg18/affyexontissuesgsmedian.rb +0 -22
  234. data/lib/bio-ucsc/hg18/affyexontissuesgsmediandist.rb +0 -22
  235. data/lib/bio-ucsc/hg18/affygnf1h.rb +0 -25
  236. data/lib/bio-ucsc/hg18/affyratio.rb +0 -28
  237. data/lib/bio-ucsc/hg18/affytxnphase3fragshdf.rb +0 -24
  238. data/lib/bio-ucsc/hg18/affytxnphase3fragshelabottomstrand.rb +0 -24
  239. data/lib/bio-ucsc/hg18/affytxnphase3fragshelacyto.rb +0 -24
  240. data/lib/bio-ucsc/hg18/affytxnphase3fragshelanuclear.rb +0 -24
  241. data/lib/bio-ucsc/hg18/affytxnphase3fragshelatopstrand.rb +0 -24
  242. data/lib/bio-ucsc/hg18/affytxnphase3fragshepg2bottomstrand.rb +0 -24
  243. data/lib/bio-ucsc/hg18/affytxnphase3fragshepg2cyto.rb +0 -24
  244. data/lib/bio-ucsc/hg18/affytxnphase3fragshepg2nuclear.rb +0 -24
  245. data/lib/bio-ucsc/hg18/affytxnphase3fragshepg2topstrand.rb +0 -24
  246. data/lib/bio-ucsc/hg18/affytxnphase3fragsjurkat.rb +0 -24
  247. data/lib/bio-ucsc/hg18/affytxnphase3fragsnccit.rb +0 -24
  248. data/lib/bio-ucsc/hg18/affytxnphase3fragspc3.rb +0 -24
  249. data/lib/bio-ucsc/hg18/affytxnphase3fragssk_n_as.rb +0 -24
  250. data/lib/bio-ucsc/hg18/affytxnphase3fragsu87mg.rb +0 -24
  251. data/lib/bio-ucsc/hg18/affytxnphase3hdf.rb +0 -25
  252. data/lib/bio-ucsc/hg18/affytxnphase3helabottomstrand.rb +0 -24
  253. data/lib/bio-ucsc/hg18/affytxnphase3helacyto.rb +0 -25
  254. data/lib/bio-ucsc/hg18/affytxnphase3helanuclear.rb +0 -25
  255. data/lib/bio-ucsc/hg18/affytxnphase3helatopstrand.rb +0 -24
  256. data/lib/bio-ucsc/hg18/affytxnphase3hepg2bottomstrand.rb +0 -24
  257. data/lib/bio-ucsc/hg18/affytxnphase3hepg2cyto.rb +0 -25
  258. data/lib/bio-ucsc/hg18/affytxnphase3hepg2nuclear.rb +0 -25
  259. data/lib/bio-ucsc/hg18/affytxnphase3hepg2topstrand.rb +0 -24
  260. data/lib/bio-ucsc/hg18/affytxnphase3jurkat.rb +0 -25
  261. data/lib/bio-ucsc/hg18/affytxnphase3nccit.rb +0 -25
  262. data/lib/bio-ucsc/hg18/affytxnphase3pc3.rb +0 -25
  263. data/lib/bio-ucsc/hg18/affytxnphase3sk_n_as.rb +0 -25
  264. data/lib/bio-ucsc/hg18/affytxnphase3u87mg.rb +0 -25
  265. data/lib/bio-ucsc/hg18/affyu133.rb +0 -25
  266. data/lib/bio-ucsc/hg18/affyu133plus2.rb +0 -25
  267. data/lib/bio-ucsc/hg18/affyu95.rb +0 -26
  268. data/lib/bio-ucsc/hg18/agilentcgh105a.rb +0 -23
  269. data/lib/bio-ucsc/hg18/agilentcgh1x1m.rb +0 -25
  270. data/lib/bio-ucsc/hg18/agilentcgh244a.rb +0 -23
  271. data/lib/bio-ucsc/hg18/agilentcgh2x400k.rb +0 -24
  272. data/lib/bio-ucsc/hg18/agilentcgh44k.rb +0 -23
  273. data/lib/bio-ucsc/hg18/agilentcgh4x180k.rb +0 -24
  274. data/lib/bio-ucsc/hg18/agilentcgh8x60k.rb +0 -24
  275. data/lib/bio-ucsc/hg18/agilenthrd1x1m.rb +0 -24
  276. data/lib/bio-ucsc/hg18/all_bacends.rb +0 -23
  277. data/lib/bio-ucsc/hg18/all_est.rb +0 -23
  278. data/lib/bio-ucsc/hg18/all_fosends.rb +0 -23
  279. data/lib/bio-ucsc/hg18/all_mrna.rb +0 -23
  280. data/lib/bio-ucsc/hg18/allenbrainali.rb +0 -26
  281. data/lib/bio-ucsc/hg18/allenbrainurl.rb +0 -27
  282. data/lib/bio-ucsc/hg18/augustusabinitio.rb +0 -24
  283. data/lib/bio-ucsc/hg18/augustushints.rb +0 -24
  284. data/lib/bio-ucsc/hg18/augustusxra.rb +0 -24
  285. data/lib/bio-ucsc/hg18/bacendpairs.rb +0 -28
  286. data/lib/bio-ucsc/hg18/biocycpathway.rb +0 -22
  287. data/lib/bio-ucsc/hg18/burgernaseqgemmapperalignadipose.rb +0 -23
  288. data/lib/bio-ucsc/hg18/burgernaseqgemmapperalignadiposeallrawsignal.rb +0 -23
  289. data/lib/bio-ucsc/hg18/burgernaseqgemmapperalignbrain.rb +0 -23
  290. data/lib/bio-ucsc/hg18/burgernaseqgemmapperalignbrainallrawsignal.rb +0 -23
  291. data/lib/bio-ucsc/hg18/burgernaseqgemmapperalignbreast.rb +0 -23
  292. data/lib/bio-ucsc/hg18/burgernaseqgemmapperalignbreastallrawsignal.rb +0 -23
  293. data/lib/bio-ucsc/hg18/burgernaseqgemmapperalignbt474.rb +0 -23
  294. data/lib/bio-ucsc/hg18/burgernaseqgemmapperalignbt474allrawsignal.rb +0 -23
  295. data/lib/bio-ucsc/hg18/burgernaseqgemmapperaligncolon.rb +0 -23
  296. data/lib/bio-ucsc/hg18/burgernaseqgemmapperaligncolonallrawsignal.rb +0 -23
  297. data/lib/bio-ucsc/hg18/burgernaseqgemmapperalignheart.rb +0 -23
  298. data/lib/bio-ucsc/hg18/burgernaseqgemmapperalignheartallrawsignal.rb +0 -23
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  1866. data/lib/bio-ucsc/hg18/wgencodedukednaseseqpeaksmyometr.rb +0 -24
  1867. data/lib/bio-ucsc/hg18/wgencodedukednaseseqpeaksnhekv2.rb +0 -24
  1868. data/lib/bio-ucsc/hg18/wgencodedukednaseseqpeakspanislets.rb +0 -24
  1869. data/lib/bio-ucsc/hg18/wgencodedukednaseseqpeaksprogfib.rb +0 -24
  1870. data/lib/bio-ucsc/hg18/wgencodedukednaseseqsignalaosmcserumfree.rb +0 -24
  1871. data/lib/bio-ucsc/hg18/wgencodedukednaseseqsignalchorion.rb +0 -24
  1872. data/lib/bio-ucsc/hg18/wgencodedukednaseseqsignalfibrobl.rb +0 -24
  1873. data/lib/bio-ucsc/hg18/wgencodedukednaseseqsignalfibrop.rb +0 -24
  1874. data/lib/bio-ucsc/hg18/wgencodedukednaseseqsignalgm12878v2.rb +0 -24
  1875. data/lib/bio-ucsc/hg18/wgencodedukednaseseqsignalgm12891.rb +0 -24
  1876. data/lib/bio-ucsc/hg18/wgencodedukednaseseqsignalgm12892.rb +0 -24
  1877. data/lib/bio-ucsc/hg18/wgencodedukednaseseqsignalgm18507.rb +0 -24
  1878. data/lib/bio-ucsc/hg18/wgencodedukednaseseqsignalgm19238.rb +0 -24
  1879. data/lib/bio-ucsc/hg18/wgencodedukednaseseqsignalgm19239.rb +0 -24
  1880. data/lib/bio-ucsc/hg18/wgencodedukednaseseqsignalgm19240.rb +0 -24
  1881. data/lib/bio-ucsc/hg18/wgencodedukednaseseqsignalh1hesc.rb +0 -24
  1882. data/lib/bio-ucsc/hg18/wgencodedukednaseseqsignalh9es.rb +0 -24
  1883. data/lib/bio-ucsc/hg18/wgencodedukednaseseqsignalhelas3ifna4h.rb +0 -24
  1884. data/lib/bio-ucsc/hg18/wgencodedukednaseseqsignalhelas3v2.rb +0 -24
  1885. data/lib/bio-ucsc/hg18/wgencodedukednaseseqsignalhepg2v2.rb +0 -24
  1886. data/lib/bio-ucsc/hg18/wgencodedukednaseseqsignalhsmm.rb +0 -24
  1887. data/lib/bio-ucsc/hg18/wgencodedukednaseseqsignalhsmmt.rb +0 -24
  1888. data/lib/bio-ucsc/hg18/wgencodedukednaseseqsignalhuvec.rb +0 -24
  1889. data/lib/bio-ucsc/hg18/wgencodedukednaseseqsignalk562v2.rb +0 -24
  1890. data/lib/bio-ucsc/hg18/wgencodedukednaseseqsignallhsr.rb +0 -24
  1891. data/lib/bio-ucsc/hg18/wgencodedukednaseseqsignallhsrandro.rb +0 -24
  1892. data/lib/bio-ucsc/hg18/wgencodedukednaseseqsignalmcf7.rb +0 -24
  1893. data/lib/bio-ucsc/hg18/wgencodedukednaseseqsignalmedullo.rb +0 -24
  1894. data/lib/bio-ucsc/hg18/wgencodedukednaseseqsignalmelano.rb +0 -24
  1895. data/lib/bio-ucsc/hg18/wgencodedukednaseseqsignalmyometr.rb +0 -24
  1896. data/lib/bio-ucsc/hg18/wgencodedukednaseseqsignalnhek.rb +0 -24
  1897. data/lib/bio-ucsc/hg18/wgencodedukednaseseqsignalpanislets.rb +0 -24
  1898. data/lib/bio-ucsc/hg18/wgencodedukednaseseqsignalprogfib.rb +0 -24
  1899. data/lib/bio-ucsc/hg18/wgencodedukeregionsexcluded.rb +0 -23
  1900. data/lib/bio-ucsc/hg18/wgencodedukeuniqueness20bp.rb +0 -23
  1901. data/lib/bio-ucsc/hg18/wgencodedukeuniqueness24bp.rb +0 -23
  1902. data/lib/bio-ucsc/hg18/wgencodedukeuniqueness35bp.rb +0 -23
  1903. data/lib/bio-ucsc/hg18/wgencodegencodeautov3.rb +0 -23
  1904. data/lib/bio-ucsc/hg18/wgencodegencodemanualv3.rb +0 -23
  1905. data/lib/bio-ucsc/hg18/wgencodegencodepolyav3.rb +0 -23
  1906. data/lib/bio-ucsc/hg18/wgencodegischippet.rb +0 -26
  1907. data/lib/bio-ucsc/hg18/wgencodegischippethes3h3k27me3.rb +0 -26
  1908. data/lib/bio-ucsc/hg18/wgencodegischippethes3h3k4me3.rb +0 -26
  1909. data/lib/bio-ucsc/hg18/wgencodegischippetmycp493.rb +0 -26
  1910. data/lib/bio-ucsc/hg18/wgencodegischippetstat1gif.rb +0 -26
  1911. data/lib/bio-ucsc/hg18/wgencodegischippetstat1nogif.rb +0 -26
  1912. data/lib/bio-ucsc/hg18/wgencodegispetalignmentsrep1gm12878cytosollongpolya.rb +0 -23
  1913. data/lib/bio-ucsc/hg18/wgencodegispetalignmentsrep1gm12878nucleuslongpolya.rb +0 -23
  1914. data/lib/bio-ucsc/hg18/wgencodegispetalignmentsrep1h1hesccelllongpolya.rb +0 -23
  1915. data/lib/bio-ucsc/hg18/wgencodegispetalignmentsrep1helas3cytosollongpolya.rb +0 -23
  1916. data/lib/bio-ucsc/hg18/wgencodegispetalignmentsrep1helas3nucleuslongpolya.rb +0 -23
  1917. data/lib/bio-ucsc/hg18/wgencodegispetalignmentsrep1hepg2cytosollongpolya.rb +0 -23
  1918. data/lib/bio-ucsc/hg18/wgencodegispetalignmentsrep1hepg2nucleuslongpolya.rb +0 -23
  1919. data/lib/bio-ucsc/hg18/wgencodegispetalignmentsrep1huveccytosollongpolya.rb +0 -23
  1920. data/lib/bio-ucsc/hg18/wgencodegispetalignmentsrep1huvecnucleuslongpolya.rb +0 -23
  1921. data/lib/bio-ucsc/hg18/wgencodegispetalignmentsrep1k562chromatintotal.rb +0 -23
  1922. data/lib/bio-ucsc/hg18/wgencodegispetalignmentsrep1k562cytosollongpolya.rb +0 -23
  1923. data/lib/bio-ucsc/hg18/wgencodegispetalignmentsrep1k562nucleolustotal.rb +0 -23
  1924. data/lib/bio-ucsc/hg18/wgencodegispetalignmentsrep1k562nucleoplasmtotal.rb +0 -23
  1925. data/lib/bio-ucsc/hg18/wgencodegispetalignmentsrep1k562nucleuslongpolya.rb +0 -23
  1926. data/lib/bio-ucsc/hg18/wgencodegispetalignmentsrep1k562polysomelongpolya.rb +0 -23
  1927. data/lib/bio-ucsc/hg18/wgencodegispetalignmentsrep1nhekcytosollongpolya.rb +0 -23
  1928. data/lib/bio-ucsc/hg18/wgencodegispetalignmentsrep1nheknucleuslongpolya.rb +0 -23
  1929. data/lib/bio-ucsc/hg18/wgencodegispetalignmentsrep1prostatecelllongpolya.rb +0 -23
  1930. data/lib/bio-ucsc/hg18/wgencodegispetalignmentsrep2gm12878cytosollongpolya.rb +0 -23
  1931. data/lib/bio-ucsc/hg18/wgencodegispetalignmentsrep2k562cytosollongpolya.rb +0 -23
  1932. data/lib/bio-ucsc/hg18/wgencodegispetclustersrep1gm12878cytosolpap.rb +0 -24
  1933. data/lib/bio-ucsc/hg18/wgencodegispetclustersrep1gm12878nucleuspap.rb +0 -24
  1934. data/lib/bio-ucsc/hg18/wgencodegispetclustersrep1h1hesccellpap.rb +0 -24
  1935. data/lib/bio-ucsc/hg18/wgencodegispetclustersrep1helas3cytosolpap.rb +0 -24
  1936. data/lib/bio-ucsc/hg18/wgencodegispetclustersrep1helas3nucleuspap.rb +0 -24
  1937. data/lib/bio-ucsc/hg18/wgencodegispetclustersrep1hepg2cytosolpap.rb +0 -24
  1938. data/lib/bio-ucsc/hg18/wgencodegispetclustersrep1hepg2nucleuspap.rb +0 -24
  1939. data/lib/bio-ucsc/hg18/wgencodegispetclustersrep1huveccytosolpap.rb +0 -24
  1940. data/lib/bio-ucsc/hg18/wgencodegispetclustersrep1huvecnucleuspap.rb +0 -24
  1941. data/lib/bio-ucsc/hg18/wgencodegispetclustersrep1k562chromatintotal.rb +0 -24
  1942. data/lib/bio-ucsc/hg18/wgencodegispetclustersrep1k562cytosolpap.rb +0 -24
  1943. data/lib/bio-ucsc/hg18/wgencodegispetclustersrep1k562nucleolustotal.rb +0 -24
  1944. data/lib/bio-ucsc/hg18/wgencodegispetclustersrep1k562nucleoplasmtotal.rb +0 -24
  1945. data/lib/bio-ucsc/hg18/wgencodegispetclustersrep1k562nucleuspap.rb +0 -24
  1946. data/lib/bio-ucsc/hg18/wgencodegispetclustersrep1k562polysomepap.rb +0 -24
  1947. data/lib/bio-ucsc/hg18/wgencodegispetclustersrep1nhekcytosolpap.rb +0 -24
  1948. data/lib/bio-ucsc/hg18/wgencodegispetclustersrep1nheknucleuspap.rb +0 -24
  1949. data/lib/bio-ucsc/hg18/wgencodegispetclustersrep1prostatecellpap.rb +0 -24
  1950. data/lib/bio-ucsc/hg18/wgencodegispetclustersrep2gm12878cytosolpap.rb +0 -24
  1951. data/lib/bio-ucsc/hg18/wgencodegispetclustersrep2k562cytosolpap.rb +0 -24
  1952. data/lib/bio-ucsc/hg18/wgencodegispetminusrawsignalrep1helas3cytosollongpolya.rb +0 -24
  1953. data/lib/bio-ucsc/hg18/wgencodegispetminusrawsignalrep1helas3nucleuslongpolya.rb +0 -24
  1954. data/lib/bio-ucsc/hg18/wgencodegispetminusrawsignalrep1huveccytosollongpolya.rb +0 -24
  1955. data/lib/bio-ucsc/hg18/wgencodegispetminusrawsigrep1gm12878cytosollongpolya.rb +0 -24
  1956. data/lib/bio-ucsc/hg18/wgencodegispetminusrawsigrep1gm12878nucleuslongpolya.rb +0 -24
  1957. data/lib/bio-ucsc/hg18/wgencodegispetminusrawsigrep1h1hesccelllongpolya.rb +0 -24
  1958. data/lib/bio-ucsc/hg18/wgencodegispetminusrawsigrep1hepg2cytosollongpolya.rb +0 -24
  1959. data/lib/bio-ucsc/hg18/wgencodegispetminusrawsigrep1hepg2nucleuslongpolya.rb +0 -24
  1960. data/lib/bio-ucsc/hg18/wgencodegispetminusrawsigrep1huvecnucleuslongpolya.rb +0 -24
  1961. data/lib/bio-ucsc/hg18/wgencodegispetminusrawsigrep1k562chromatintotal.rb +0 -24
  1962. data/lib/bio-ucsc/hg18/wgencodegispetminusrawsigrep1k562cytosollongpolya.rb +0 -24
  1963. data/lib/bio-ucsc/hg18/wgencodegispetminusrawsigrep1k562nucleolustotal.rb +0 -24
  1964. data/lib/bio-ucsc/hg18/wgencodegispetminusrawsigrep1k562nucleoplasmtotal.rb +0 -24
  1965. data/lib/bio-ucsc/hg18/wgencodegispetminusrawsigrep1k562nucleuslongpolya.rb +0 -24
  1966. data/lib/bio-ucsc/hg18/wgencodegispetminusrawsigrep1k562polysomelongpolya.rb +0 -24
  1967. data/lib/bio-ucsc/hg18/wgencodegispetminusrawsigrep1nhekcytosollongpolya.rb +0 -24
  1968. data/lib/bio-ucsc/hg18/wgencodegispetminusrawsigrep1nheknucleuslongpolya.rb +0 -24
  1969. data/lib/bio-ucsc/hg18/wgencodegispetminusrawsigrep1prostatecelllongpolya.rb +0 -24
  1970. data/lib/bio-ucsc/hg18/wgencodegispetminusrawsigrep2gm12878cytosollongpolya.rb +0 -24
  1971. data/lib/bio-ucsc/hg18/wgencodegispetminusrawsigrep2k562cytosollongpolya.rb +0 -24
  1972. data/lib/bio-ucsc/hg18/wgencodegispetplusrawsignalrep1helas3cytosollongpolya.rb +0 -24
  1973. data/lib/bio-ucsc/hg18/wgencodegispetplusrawsignalrep1helas3nucleuslongpolya.rb +0 -24
  1974. data/lib/bio-ucsc/hg18/wgencodegispetplusrawsignalrep1huveccytosollongpolya.rb +0 -24
  1975. data/lib/bio-ucsc/hg18/wgencodegispetplusrawsigrep1gm12878cytosollongpolya.rb +0 -24
  1976. data/lib/bio-ucsc/hg18/wgencodegispetplusrawsigrep1gm12878nucleuslongpolya.rb +0 -24
  1977. data/lib/bio-ucsc/hg18/wgencodegispetplusrawsigrep1h1hesccelllongpolya.rb +0 -24
  1978. data/lib/bio-ucsc/hg18/wgencodegispetplusrawsigrep1hepg2cytosollongpolya.rb +0 -24
  1979. data/lib/bio-ucsc/hg18/wgencodegispetplusrawsigrep1hepg2nucleuslongpolya.rb +0 -24
  1980. data/lib/bio-ucsc/hg18/wgencodegispetplusrawsigrep1huvecnucleuslongpolya.rb +0 -24
  1981. data/lib/bio-ucsc/hg18/wgencodegispetplusrawsigrep1k562chromatintotal.rb +0 -24
  1982. data/lib/bio-ucsc/hg18/wgencodegispetplusrawsigrep1k562cytosollongpolya.rb +0 -24
  1983. data/lib/bio-ucsc/hg18/wgencodegispetplusrawsigrep1k562nucleolustotal.rb +0 -24
  1984. data/lib/bio-ucsc/hg18/wgencodegispetplusrawsigrep1k562nucleoplasmtotal.rb +0 -24
  1985. data/lib/bio-ucsc/hg18/wgencodegispetplusrawsigrep1k562nucleuslongpolya.rb +0 -24
  1986. data/lib/bio-ucsc/hg18/wgencodegispetplusrawsigrep1k562polysomelongpolya.rb +0 -24
  1987. data/lib/bio-ucsc/hg18/wgencodegispetplusrawsigrep1nhekcytosollongpolya.rb +0 -24
  1988. data/lib/bio-ucsc/hg18/wgencodegispetplusrawsigrep1nheknucleuslongpolya.rb +0 -24
  1989. data/lib/bio-ucsc/hg18/wgencodegispetplusrawsigrep1prostatecelllongpolya.rb +0 -24
  1990. data/lib/bio-ucsc/hg18/wgencodegispetplusrawsigrep2gm12878cytosollongpolya.rb +0 -24
  1991. data/lib/bio-ucsc/hg18/wgencodegispetplusrawsigrep2k562cytosollongpolya.rb +0 -24
  1992. data/lib/bio-ucsc/hg18/wgencodegisrnapethct116.rb +0 -27
  1993. data/lib/bio-ucsc/hg18/wgencodegisrnapethes3.rb +0 -27
  1994. data/lib/bio-ucsc/hg18/wgencodegisrnapetmcf7.rb +0 -25
  1995. data/lib/bio-ucsc/hg18/wgencodegisrnapetmcf7estr.rb +0 -25
  1996. data/lib/bio-ucsc/hg18/wgencodegisrnaseqalignmentsrep1gm12878cytosollongpolya.rb +0 -23
  1997. data/lib/bio-ucsc/hg18/wgencodegisrnaseqalignmentsrep1h1hesccelllongpolya.rb +0 -23
  1998. data/lib/bio-ucsc/hg18/wgencodegisrnaseqalignmentsrep1k562cytosollongpolya.rb +0 -23
  1999. data/lib/bio-ucsc/hg18/wgencodegisrnaseqalignmentsrep2k562cytosollongpolya.rb +0 -23
  2000. data/lib/bio-ucsc/hg18/wgencodegisrnaseqallrawsignalrep1gm12878cytosollongpolya.rb +0 -24
  2001. data/lib/bio-ucsc/hg18/wgencodegisrnaseqallrawsignalrep1h1hesccelllongpolya.rb +0 -24
  2002. data/lib/bio-ucsc/hg18/wgencodegisrnaseqallrawsignalrep1k562cytosollongpolya.rb +0 -24
  2003. data/lib/bio-ucsc/hg18/wgencodegisrnaseqallrawsignalrep2k562cytosollongpolya.rb +0 -24
  2004. data/lib/bio-ucsc/hg18/wgencodegisrnaseqminusrawsignalrep1gm12878cytosollongpolya.rb +0 -24
  2005. data/lib/bio-ucsc/hg18/wgencodegisrnaseqminusrawsignalrep1h1hesccelllongpolya.rb +0 -24
  2006. data/lib/bio-ucsc/hg18/wgencodegisrnaseqminusrawsignalrep1k562cytosollongpolya.rb +0 -24
  2007. data/lib/bio-ucsc/hg18/wgencodegisrnaseqminusrawsignalrep2k562cytosollongpolya.rb +0 -24
  2008. data/lib/bio-ucsc/hg18/wgencodegisrnaseqplusrawsignalrep1gm12878cytosollongpolya.rb +0 -24
  2009. data/lib/bio-ucsc/hg18/wgencodegisrnaseqplusrawsignalrep1h1hesccelllongpolya.rb +0 -24
  2010. data/lib/bio-ucsc/hg18/wgencodegisrnaseqplusrawsignalrep1k562cytosollongpolya.rb +0 -24
  2011. data/lib/bio-ucsc/hg18/wgencodegisrnaseqplusrawsignalrep2k562cytosollongpolya.rb +0 -24
  2012. data/lib/bio-ucsc/hg18/wgencodegisrnaseqsplitalignrep1h1hesccelllongpolya.rb +0 -24
  2013. data/lib/bio-ucsc/hg18/wgencodegisrnaseqsplitalignrep1k562cytosollongpolya.rb +0 -24
  2014. data/lib/bio-ucsc/hg18/wgencodehelicosrnaseqalignmentsk562cytosollongpolya.rb +0 -23
  2015. data/lib/bio-ucsc/hg18/wgencodehelicosrnaseqrawsignalk562cytosollongpolya.rb +0 -24
  2016. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksa549gr.rb +0 -25
  2017. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1a549ctcfpcr1xdexa.rb +0 -25
  2018. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1a549ctcfpcr1xetoh02.rb +0 -25
  2019. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1a549grpcr1xdex500pm.rb +0 -25
  2020. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1a549grpcr1xdex50nm.rb +0 -25
  2021. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1a549grpcr1xdex5nm.rb +0 -25
  2022. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1a549pol2.rb +0 -25
  2023. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1a549pol2pcr2xetoh02.rb +0 -25
  2024. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1a549usf1pcr1xdexa.rb +0 -25
  2025. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1a549usf1pcr1xetoh02.rb +0 -25
  2026. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1be2cnrsf.rb +0 -25
  2027. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1gm12878batf.rb +0 -25
  2028. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1gm12878bcl11a.rb +0 -25
  2029. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1gm12878bcl3pcr1xbcl3.rb +0 -25
  2030. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1gm12878ebf.rb +0 -25
  2031. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1gm12878egr1.rb +0 -25
  2032. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1gm12878gabp.rb +0 -25
  2033. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1gm12878irf4.rb +0 -25
  2034. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1gm12878nrsf.rb +0 -25
  2035. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1gm12878oct2.rb +0 -25
  2036. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1gm12878p300.rb +0 -25
  2037. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1gm12878pax5c20.rb +0 -25
  2038. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1gm12878pax5n19.rb +0 -25
  2039. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1gm12878pbx3.rb +0 -25
  2040. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1gm12878pol2.rb +0 -25
  2041. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1gm12878pol24h8pcr1x.rb +0 -25
  2042. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1gm12878pu1.rb +0 -25
  2043. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1gm12878sin3ak20.rb +0 -25
  2044. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1gm12878sp1pcr1x.rb +0 -25
  2045. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1gm12878srf.rb +0 -25
  2046. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1gm12878taf1.rb +0 -25
  2047. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1gm12878tcf12.rb +0 -25
  2048. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1gm12878usf1.rb +0 -25
  2049. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1gm12878zbtb33.rb +0 -25
  2050. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1gm12891pol24h8pcr1x.rb +0 -25
  2051. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1gm12891pol2pcr1x.rb +0 -25
  2052. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1gm12891pou2f2pcr1x.rb +0 -25
  2053. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1gm12891pu1pcr1x.rb +0 -25
  2054. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1gm12891taf1pcr1x.rb +0 -25
  2055. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1gm12892pol24h8pcr1x.rb +0 -25
  2056. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1gm12892pol2pcr1x.rb +0 -25
  2057. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1gm12892taf1pcr1x.rb +0 -25
  2058. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1h1hescnrsfpcr1x.rb +0 -25
  2059. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1h1hescpol24h8pcr1x.rb +0 -25
  2060. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1h1hescpol2pcr1x.rb +0 -25
  2061. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1h1hesctaf1pcr1x.rb +0 -25
  2062. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1helas3gabp.rb +0 -25
  2063. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1helas3pol2.rb +0 -25
  2064. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqpeaksrep1helas3taf1pcr1xtaf1.rb +0 -25
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