bio-ucsc-api 0.0.3 → 0.0.4

data/lib/bio-ucsc/hg19/wgencodeuwhistonehvmfh3k4me3stdpkrep2.rb

@@ -0,0 +1,26 @@
+# -*- coding: utf-8 -*-
+# = hg19/wgencodeuwhistonehvmfh3k4me3stdpkrep2.rb
+# Copyright::
+#  Copyright (C) 2011 MISHIMA, Hiroyuki
+#                <missy at be.to / hmishima at nagasaki-u.ac.jp> 
+# License::     The Ruby licence (Ryby's / GPLv2 dual)
+#
+# = Table desfription in UCSC Table Browser
+# This track is produced as part of the ENCODE Project. This track
+# displays genome-wide maps of histone modifications in different cell
+# lines, using ChIP-seq high-throughput sequencing.
+#
+# = ommitted dynamic method(s) due to the method name collision
+#  none
+
+module Bio
+  module Ucsc
+    module Hg19
+      class WgEncodeUwHistoneHvmfH3k4me3StdPkRep2 < DBConnection
+        extend Bio::Ucsc::Hg19::QueryUsingChromBin
+        set_table_name 'wgEncodeUwHistoneHvmfH3k4me3StdPkRep2'
+        set_primary_key nil
+      end 
+    end # module Hg19
+  end # module Ucsc
+end # Bio

data/lib/bio-ucsc/hg19/wgencodeuwhistonejurkath3k4me3stdhotspotsrep1.rb

@@ -0,0 +1,26 @@
+# -*- coding: utf-8 -*-
+# = hg19/wgencodeuwhistonejurkath3k4me3stdhotspotsrep1.rb
+# Copyright::
+#  Copyright (C) 2011 MISHIMA, Hiroyuki
+#                <missy at be.to / hmishima at nagasaki-u.ac.jp> 
+# License::     The Ruby licence (Ryby's / GPLv2 dual)
+#
+# = Table desfription in UCSC Table Browser
+# This track is produced as part of the ENCODE Project. This track
+# displays genome-wide maps of histone modifications in different cell
+# lines, using ChIP-seq high-throughput sequencing.
+#
+# = ommitted dynamic method(s) due to the method name collision
+#  none
+
+module Bio
+  module Ucsc
+    module Hg19
+      class WgEncodeUwHistoneJurkatH3k4me3StdHotspotsRep1 < DBConnection
+        extend Bio::Ucsc::Hg19::QueryUsingChromBin
+        set_table_name 'wgEncodeUwHistoneJurkatH3k4me3StdHotspotsRep1'
+        set_primary_key nil
+      end 
+    end # module Hg19
+  end # module Ucsc
+end # Bio

data/lib/bio-ucsc/hg19/wgencodeuwhistonejurkath3k4me3stdhotspotsrep2.rb

@@ -0,0 +1,26 @@
+# -*- coding: utf-8 -*-
+# = hg19/wgencodeuwhistonejurkath3k4me3stdhotspotsrep2.rb
+# Copyright::
+#  Copyright (C) 2011 MISHIMA, Hiroyuki
+#                <missy at be.to / hmishima at nagasaki-u.ac.jp> 
+# License::     The Ruby licence (Ryby's / GPLv2 dual)
+#
+# = Table desfription in UCSC Table Browser
+# This track is produced as part of the ENCODE Project. This track
+# displays genome-wide maps of histone modifications in different cell
+# lines, using ChIP-seq high-throughput sequencing.
+#
+# = ommitted dynamic method(s) due to the method name collision
+#  none
+
+module Bio
+  module Ucsc
+    module Hg19
+      class WgEncodeUwHistoneJurkatH3k4me3StdHotspotsRep2 < DBConnection
+        extend Bio::Ucsc::Hg19::QueryUsingChromBin
+        set_table_name 'wgEncodeUwHistoneJurkatH3k4me3StdHotspotsRep2'
+        set_primary_key nil
+      end 
+    end # module Hg19
+  end # module Ucsc
+end # Bio

data/lib/bio-ucsc/hg19/wgencodeuwhistonejurkath3k4me3stdpkrep1.rb

@@ -0,0 +1,26 @@
+# -*- coding: utf-8 -*-
+# = hg19/wgencodeuwhistonejurkath3k4me3stdpkrep1.rb
+# Copyright::
+#  Copyright (C) 2011 MISHIMA, Hiroyuki
+#                <missy at be.to / hmishima at nagasaki-u.ac.jp> 
+# License::     The Ruby licence (Ryby's / GPLv2 dual)
+#
+# = Table desfription in UCSC Table Browser
+# This track is produced as part of the ENCODE Project. This track
+# displays genome-wide maps of histone modifications in different cell
+# lines, using ChIP-seq high-throughput sequencing.
+#
+# = ommitted dynamic method(s) due to the method name collision
+#  none
+
+module Bio
+  module Ucsc
+    module Hg19
+      class WgEncodeUwHistoneJurkatH3k4me3StdPkRep1 < DBConnection
+        extend Bio::Ucsc::Hg19::QueryUsingChromBin
+        set_table_name 'wgEncodeUwHistoneJurkatH3k4me3StdPkRep1'
+        set_primary_key nil
+      end 
+    end # module Hg19
+  end # module Ucsc
+end # Bio

data/lib/bio-ucsc/hg19/wgencodeuwhistonejurkath3k4me3stdpkrep2.rb

@@ -0,0 +1,26 @@
+# -*- coding: utf-8 -*-
+# = hg19/wgencodeuwhistonejurkath3k4me3stdpkrep2.rb
+# Copyright::
+#  Copyright (C) 2011 MISHIMA, Hiroyuki
+#                <missy at be.to / hmishima at nagasaki-u.ac.jp> 
+# License::     The Ruby licence (Ryby's / GPLv2 dual)
+#
+# = Table desfription in UCSC Table Browser
+# This track is produced as part of the ENCODE Project. This track
+# displays genome-wide maps of histone modifications in different cell
+# lines, using ChIP-seq high-throughput sequencing.
+#
+# = ommitted dynamic method(s) due to the method name collision
+#  none
+
+module Bio
+  module Ucsc
+    module Hg19
+      class WgEncodeUwHistoneJurkatH3k4me3StdPkRep2 < DBConnection
+        extend Bio::Ucsc::Hg19::QueryUsingChromBin
+        set_table_name 'wgEncodeUwHistoneJurkatH3k4me3StdPkRep2'
+        set_primary_key nil
+      end 
+    end # module Hg19
+  end # module Ucsc
+end # Bio

data/lib/bio-ucsc/hg19/wgencodeuwhistonek562h3k27me3stdhotspotsrep1.rb

@@ -0,0 +1,26 @@
+# -*- coding: utf-8 -*-
+# = hg19/wgencodeuwhistonek562h3k27me3stdhotspotsrep1.rb
+# Copyright::
+#  Copyright (C) 2011 MISHIMA, Hiroyuki
+#                <missy at be.to / hmishima at nagasaki-u.ac.jp> 
+# License::     The Ruby licence (Ryby's / GPLv2 dual)
+#
+# = Table desfription in UCSC Table Browser
+# This track is produced as part of the ENCODE Project. This track
+# displays genome-wide maps of histone modifications in different cell
+# lines, using ChIP-seq high-throughput sequencing.
+#
+# = ommitted dynamic method(s) due to the method name collision
+#  none
+
+module Bio
+  module Ucsc
+    module Hg19
+      class WgEncodeUwHistoneK562H3k27me3StdHotspotsRep1 < DBConnection
+        extend Bio::Ucsc::Hg19::QueryUsingChromBin
+        set_table_name 'wgEncodeUwHistoneK562H3k27me3StdHotspotsRep1'
+        set_primary_key nil
+      end 
+    end # module Hg19
+  end # module Ucsc
+end # Bio

data/lib/bio-ucsc/hg19/wgencodeuwhistonek562h3k27me3stdhotspotsrep2.rb

@@ -0,0 +1,26 @@
+# -*- coding: utf-8 -*-
+# = hg19/wgencodeuwhistonek562h3k27me3stdhotspotsrep2.rb
+# Copyright::
+#  Copyright (C) 2011 MISHIMA, Hiroyuki
+#                <missy at be.to / hmishima at nagasaki-u.ac.jp> 
+# License::     The Ruby licence (Ryby's / GPLv2 dual)
+#
+# = Table desfription in UCSC Table Browser
+# This track is produced as part of the ENCODE Project. This track
+# displays genome-wide maps of histone modifications in different cell
+# lines, using ChIP-seq high-throughput sequencing.
+#
+# = ommitted dynamic method(s) due to the method name collision
+#  none
+
+module Bio
+  module Ucsc
+    module Hg19
+      class WgEncodeUwHistoneK562H3k27me3StdHotspotsRep2 < DBConnection
+        extend Bio::Ucsc::Hg19::QueryUsingChromBin
+        set_table_name 'wgEncodeUwHistoneK562H3k27me3StdHotspotsRep2'
+        set_primary_key nil
+      end 
+    end # module Hg19
+  end # module Ucsc
+end # Bio

data/lib/bio-ucsc/hg19/wgencodeuwhistonek562h3k27me3stdpkrep1.rb

@@ -0,0 +1,26 @@
+# -*- coding: utf-8 -*-
+# = hg19/wgencodeuwhistonek562h3k27me3stdpkrep1.rb
+# Copyright::
+#  Copyright (C) 2011 MISHIMA, Hiroyuki
+#                <missy at be.to / hmishima at nagasaki-u.ac.jp> 
+# License::     The Ruby licence (Ryby's / GPLv2 dual)
+#
+# = Table desfription in UCSC Table Browser
+# This track is produced as part of the ENCODE Project. This track
+# displays genome-wide maps of histone modifications in different cell
+# lines, using ChIP-seq high-throughput sequencing.
+#
+# = ommitted dynamic method(s) due to the method name collision
+#  none
+
+module Bio
+  module Ucsc
+    module Hg19
+      class WgEncodeUwHistoneK562H3k27me3StdPkRep1 < DBConnection
+        extend Bio::Ucsc::Hg19::QueryUsingChromBin
+        set_table_name 'wgEncodeUwHistoneK562H3k27me3StdPkRep1'
+        set_primary_key nil
+      end 
+    end # module Hg19
+  end # module Ucsc
+end # Bio

data/lib/bio-ucsc/hg19/wgencodeuwhistonek562h3k27me3stdpkrep2.rb

@@ -0,0 +1,26 @@
+# -*- coding: utf-8 -*-
+# = hg19/wgencodeuwhistonek562h3k27me3stdpkrep2.rb
+# Copyright::
+#  Copyright (C) 2011 MISHIMA, Hiroyuki
+#                <missy at be.to / hmishima at nagasaki-u.ac.jp> 
+# License::     The Ruby licence (Ryby's / GPLv2 dual)
+#
+# = Table desfription in UCSC Table Browser
+# This track is produced as part of the ENCODE Project. This track
+# displays genome-wide maps of histone modifications in different cell
+# lines, using ChIP-seq high-throughput sequencing.
+#
+# = ommitted dynamic method(s) due to the method name collision
+#  none
+
+module Bio
+  module Ucsc
+    module Hg19
+      class WgEncodeUwHistoneK562H3k27me3StdPkRep2 < DBConnection
+        extend Bio::Ucsc::Hg19::QueryUsingChromBin
+        set_table_name 'wgEncodeUwHistoneK562H3k27me3StdPkRep2'
+        set_primary_key nil
+      end 
+    end # module Hg19
+  end # module Ucsc
+end # Bio

data/lib/bio-ucsc/hg19/wgencodeuwhistonek562h3k36me3stdhotspotsrep1.rb

@@ -0,0 +1,26 @@
+# -*- coding: utf-8 -*-
+# = hg19/wgencodeuwhistonek562h3k36me3stdhotspotsrep1.rb
+# Copyright::
+#  Copyright (C) 2011 MISHIMA, Hiroyuki
+#                <missy at be.to / hmishima at nagasaki-u.ac.jp> 
+# License::     The Ruby licence (Ryby's / GPLv2 dual)
+#
+# = Table desfription in UCSC Table Browser
+# This track is produced as part of the ENCODE Project. This track
+# displays genome-wide maps of histone modifications in different cell
+# lines, using ChIP-seq high-throughput sequencing.
+#
+# = ommitted dynamic method(s) due to the method name collision
+#  none
+
+module Bio
+  module Ucsc
+    module Hg19
+      class WgEncodeUwHistoneK562H3k36me3StdHotspotsRep1 < DBConnection
+        extend Bio::Ucsc::Hg19::QueryUsingChromBin
+        set_table_name 'wgEncodeUwHistoneK562H3k36me3StdHotspotsRep1'
+        set_primary_key nil
+      end 
+    end # module Hg19
+  end # module Ucsc
+end # Bio

data/lib/bio-ucsc/hg19/wgencodeuwhistonek562h3k36me3stdhotspotsrep2.rb

@@ -0,0 +1,26 @@
+# -*- coding: utf-8 -*-
+# = hg19/wgencodeuwhistonek562h3k36me3stdhotspotsrep2.rb
+# Copyright::
+#  Copyright (C) 2011 MISHIMA, Hiroyuki
+#                <missy at be.to / hmishima at nagasaki-u.ac.jp> 
+# License::     The Ruby licence (Ryby's / GPLv2 dual)
+#
+# = Table desfription in UCSC Table Browser
+# This track is produced as part of the ENCODE Project. This track
+# displays genome-wide maps of histone modifications in different cell
+# lines, using ChIP-seq high-throughput sequencing.
+#
+# = ommitted dynamic method(s) due to the method name collision
+#  none
+
+module Bio
+  module Ucsc
+    module Hg19
+      class WgEncodeUwHistoneK562H3k36me3StdHotspotsRep2 < DBConnection
+        extend Bio::Ucsc::Hg19::QueryUsingChromBin
+        set_table_name 'wgEncodeUwHistoneK562H3k36me3StdHotspotsRep2'
+        set_primary_key nil
+      end 
+    end # module Hg19
+  end # module Ucsc
+end # Bio

data/lib/bio-ucsc/hg19/wgencodeuwhistonek562h3k36me3stdpkrep1.rb

@@ -0,0 +1,26 @@
+# -*- coding: utf-8 -*-
+# = hg19/wgencodeuwhistonek562h3k36me3stdpkrep1.rb
+# Copyright::
+#  Copyright (C) 2011 MISHIMA, Hiroyuki
+#                <missy at be.to / hmishima at nagasaki-u.ac.jp> 
+# License::     The Ruby licence (Ryby's / GPLv2 dual)
+#
+# = Table desfription in UCSC Table Browser
+# This track is produced as part of the ENCODE Project. This track
+# displays genome-wide maps of histone modifications in different cell
+# lines, using ChIP-seq high-throughput sequencing.
+#
+# = ommitted dynamic method(s) due to the method name collision
+#  none
+
+module Bio
+  module Ucsc
+    module Hg19
+      class WgEncodeUwHistoneK562H3k36me3StdPkRep1 < DBConnection
+        extend Bio::Ucsc::Hg19::QueryUsingChromBin
+        set_table_name 'wgEncodeUwHistoneK562H3k36me3StdPkRep1'
+        set_primary_key nil
+      end 
+    end # module Hg19
+  end # module Ucsc
+end # Bio

data/lib/bio-ucsc/hg19/wgencodeuwhistonek562h3k36me3stdpkrep2.rb

@@ -0,0 +1,26 @@
+# -*- coding: utf-8 -*-
+# = hg19/wgencodeuwhistonek562h3k36me3stdpkrep2.rb
+# Copyright::
+#  Copyright (C) 2011 MISHIMA, Hiroyuki
+#                <missy at be.to / hmishima at nagasaki-u.ac.jp> 
+# License::     The Ruby licence (Ryby's / GPLv2 dual)
+#
+# = Table desfription in UCSC Table Browser
+# This track is produced as part of the ENCODE Project. This track
+# displays genome-wide maps of histone modifications in different cell
+# lines, using ChIP-seq high-throughput sequencing.
+#
+# = ommitted dynamic method(s) due to the method name collision
+#  none
+
+module Bio
+  module Ucsc
+    module Hg19
+      class WgEncodeUwHistoneK562H3k36me3StdPkRep2 < DBConnection
+        extend Bio::Ucsc::Hg19::QueryUsingChromBin
+        set_table_name 'wgEncodeUwHistoneK562H3k36me3StdPkRep2'
+        set_primary_key nil
+      end 
+    end # module Hg19
+  end # module Ucsc
+end # Bio

data/lib/bio-ucsc/hg19/wgencodeuwhistonek562h3k4me3stdhotspotsrep1.rb

@@ -0,0 +1,26 @@
+# -*- coding: utf-8 -*-
+# = hg19/wgencodeuwhistonek562h3k4me3stdhotspotsrep1.rb
+# Copyright::
+#  Copyright (C) 2011 MISHIMA, Hiroyuki
+#                <missy at be.to / hmishima at nagasaki-u.ac.jp> 
+# License::     The Ruby licence (Ryby's / GPLv2 dual)
+#
+# = Table desfription in UCSC Table Browser
+# This track is produced as part of the ENCODE Project. This track
+# displays genome-wide maps of histone modifications in different cell
+# lines, using ChIP-seq high-throughput sequencing.
+#
+# = ommitted dynamic method(s) due to the method name collision
+#  none
+
+module Bio
+  module Ucsc
+    module Hg19
+      class WgEncodeUwHistoneK562H3k4me3StdHotspotsRep1 < DBConnection
+        extend Bio::Ucsc::Hg19::QueryUsingChromBin
+        set_table_name 'wgEncodeUwHistoneK562H3k4me3StdHotspotsRep1'
+        set_primary_key nil
+      end 
+    end # module Hg19
+  end # module Ucsc
+end # Bio

data/lib/bio-ucsc/hg19/wgencodeuwhistonek562h3k4me3stdhotspotsrep2.rb

@@ -0,0 +1,26 @@
+# -*- coding: utf-8 -*-
+# = hg19/wgencodeuwhistonek562h3k4me3stdhotspotsrep2.rb
+# Copyright::
+#  Copyright (C) 2011 MISHIMA, Hiroyuki
+#                <missy at be.to / hmishima at nagasaki-u.ac.jp> 
+# License::     The Ruby licence (Ryby's / GPLv2 dual)
+#
+# = Table desfription in UCSC Table Browser
+# This track is produced as part of the ENCODE Project. This track
+# displays genome-wide maps of histone modifications in different cell
+# lines, using ChIP-seq high-throughput sequencing.
+#
+# = ommitted dynamic method(s) due to the method name collision
+#  none
+
+module Bio
+  module Ucsc
+    module Hg19
+      class WgEncodeUwHistoneK562H3k4me3StdHotspotsRep2 < DBConnection
+        extend Bio::Ucsc::Hg19::QueryUsingChromBin
+        set_table_name 'wgEncodeUwHistoneK562H3k4me3StdHotspotsRep2'
+        set_primary_key nil
+      end 
+    end # module Hg19
+  end # module Ucsc
+end # Bio

data/lib/bio-ucsc/hg19/wgencodeuwhistonek562h3k4me3stdpkrep1.rb

@@ -0,0 +1,26 @@
+# -*- coding: utf-8 -*-
+# = hg19/wgencodeuwhistonek562h3k4me3stdpkrep1.rb
+# Copyright::
+#  Copyright (C) 2011 MISHIMA, Hiroyuki
+#                <missy at be.to / hmishima at nagasaki-u.ac.jp> 
+# License::     The Ruby licence (Ryby's / GPLv2 dual)
+#
+# = Table desfription in UCSC Table Browser
+# This track is produced as part of the ENCODE Project. This track
+# displays genome-wide maps of histone modifications in different cell
+# lines, using ChIP-seq high-throughput sequencing.
+#
+# = ommitted dynamic method(s) due to the method name collision
+#  none
+
+module Bio
+  module Ucsc
+    module Hg19
+      class WgEncodeUwHistoneK562H3k4me3StdPkRep1 < DBConnection
+        extend Bio::Ucsc::Hg19::QueryUsingChromBin
+        set_table_name 'wgEncodeUwHistoneK562H3k4me3StdPkRep1'
+        set_primary_key nil
+      end 
+    end # module Hg19
+  end # module Ucsc
+end # Bio

data/lib/bio-ucsc/hg19/wgencodeuwhistonek562h3k4me3stdpkrep2.rb

@@ -0,0 +1,26 @@
+# -*- coding: utf-8 -*-
+# = hg19/wgencodeuwhistonek562h3k4me3stdpkrep2.rb
+# Copyright::
+#  Copyright (C) 2011 MISHIMA, Hiroyuki
+#                <missy at be.to / hmishima at nagasaki-u.ac.jp> 
+# License::     The Ruby licence (Ryby's / GPLv2 dual)
+#
+# = Table desfription in UCSC Table Browser
+# This track is produced as part of the ENCODE Project. This track
+# displays genome-wide maps of histone modifications in different cell
+# lines, using ChIP-seq high-throughput sequencing.
+#
+# = ommitted dynamic method(s) due to the method name collision
+#  none
+
+module Bio
+  module Ucsc
+    module Hg19
+      class WgEncodeUwHistoneK562H3k4me3StdPkRep2 < DBConnection
+        extend Bio::Ucsc::Hg19::QueryUsingChromBin
+        set_table_name 'wgEncodeUwHistoneK562H3k4me3StdPkRep2'
+        set_primary_key nil
+      end 
+    end # module Hg19
+  end # module Ucsc
+end # Bio