bel_parser 1.0.0.alpha.1

Sign up to get free protection for your applications and to get access to all the features.
Files changed (182) hide show
  1. checksums.yaml +7 -0
  2. data/.gemspec +28 -0
  3. data/CHANGELOG.md +10 -0
  4. data/LICENSE +191 -0
  5. data/README.md +9 -0
  6. data/VERSION +1 -0
  7. data/bin/bel2_termcheck +39 -0
  8. data/lib/bel_parser.rb +17 -0
  9. data/lib/bel_parser/ast_filter.rb +27 -0
  10. data/lib/bel_parser/ast_generator.rb +86 -0
  11. data/lib/bel_parser/ast_validator.rb +40 -0
  12. data/lib/bel_parser/expression/parser.rb +42 -0
  13. data/lib/bel_parser/expression/term_semantics.rb +36 -0
  14. data/lib/bel_parser/language.rb +7 -0
  15. data/lib/bel_parser/language/function.rb +59 -0
  16. data/lib/bel_parser/language/quoting.rb +236 -0
  17. data/lib/bel_parser/language/semantic_ast.rb +604 -0
  18. data/lib/bel_parser/language/semantics/analyzer.rb +59 -0
  19. data/lib/bel_parser/language/signature.rb +39 -0
  20. data/lib/bel_parser/language/specification.rb +49 -0
  21. data/lib/bel_parser/language/syntax/expression/incomplete_node.rb +14 -0
  22. data/lib/bel_parser/language/syntax/expression/invalid_term_function.rb +22 -0
  23. data/lib/bel_parser/language/version1.rb +50 -0
  24. data/lib/bel_parser/language/version1/functions/abundance.rb +85 -0
  25. data/lib/bel_parser/language/version1/functions/biological_process.rb +85 -0
  26. data/lib/bel_parser/language/version1/functions/catalytic_activity.rb +110 -0
  27. data/lib/bel_parser/language/version1/functions/cell_secretion.rb +80 -0
  28. data/lib/bel_parser/language/version1/functions/cell_surface_expression.rb +80 -0
  29. data/lib/bel_parser/language/version1/functions/chaperone_activity.rb +110 -0
  30. data/lib/bel_parser/language/version1/functions/complex_abundance.rb +115 -0
  31. data/lib/bel_parser/language/version1/functions/composite_abundance.rb +80 -0
  32. data/lib/bel_parser/language/version1/functions/degradation.rb +80 -0
  33. data/lib/bel_parser/language/version1/functions/fusion.rb +302 -0
  34. data/lib/bel_parser/language/version1/functions/gene_abundance.rb +125 -0
  35. data/lib/bel_parser/language/version1/functions/gtp_bound_activity.rb +110 -0
  36. data/lib/bel_parser/language/version1/functions/kinase_activity.rb +110 -0
  37. data/lib/bel_parser/language/version1/functions/list.rb +115 -0
  38. data/lib/bel_parser/language/version1/functions/micro_rna_abundance.rb +85 -0
  39. data/lib/bel_parser/language/version1/functions/molecular_activity.rb +80 -0
  40. data/lib/bel_parser/language/version1/functions/pathology.rb +85 -0
  41. data/lib/bel_parser/language/version1/functions/peptidase_activity.rb +110 -0
  42. data/lib/bel_parser/language/version1/functions/phosphatase_activity.rb +110 -0
  43. data/lib/bel_parser/language/version1/functions/products.rb +80 -0
  44. data/lib/bel_parser/language/version1/functions/protein_abundance.rb +245 -0
  45. data/lib/bel_parser/language/version1/functions/protein_modification.rb +167 -0
  46. data/lib/bel_parser/language/version1/functions/reactants.rb +80 -0
  47. data/lib/bel_parser/language/version1/functions/reaction.rb +85 -0
  48. data/lib/bel_parser/language/version1/functions/ribosylation_activity.rb +110 -0
  49. data/lib/bel_parser/language/version1/functions/rna_abundance.rb +125 -0
  50. data/lib/bel_parser/language/version1/functions/substitution.rb +96 -0
  51. data/lib/bel_parser/language/version1/functions/transcriptional_activity.rb +110 -0
  52. data/lib/bel_parser/language/version1/functions/translocation.rb +100 -0
  53. data/lib/bel_parser/language/version1/functions/transport_activity.rb +110 -0
  54. data/lib/bel_parser/language/version1/functions/truncation.rb +82 -0
  55. data/lib/bel_parser/language/version1/return_types/abundance.rb +20 -0
  56. data/lib/bel_parser/language/version1/return_types/any.rb +74 -0
  57. data/lib/bel_parser/language/version1/return_types/biological_process.rb +17 -0
  58. data/lib/bel_parser/language/version1/return_types/catalytic_activity.rb +20 -0
  59. data/lib/bel_parser/language/version1/return_types/chaperone_activity.rb +20 -0
  60. data/lib/bel_parser/language/version1/return_types/complex_abundance.rb +17 -0
  61. data/lib/bel_parser/language/version1/return_types/fusion.rb +17 -0
  62. data/lib/bel_parser/language/version1/return_types/gene_abundance.rb +17 -0
  63. data/lib/bel_parser/language/version1/return_types/gtp_bound_activity.rb +20 -0
  64. data/lib/bel_parser/language/version1/return_types/kinase_activity.rb +20 -0
  65. data/lib/bel_parser/language/version1/return_types/list.rb +17 -0
  66. data/lib/bel_parser/language/version1/return_types/micro_rna_abundance.rb +17 -0
  67. data/lib/bel_parser/language/version1/return_types/molecular_activity.rb +20 -0
  68. data/lib/bel_parser/language/version1/return_types/pathology.rb +17 -0
  69. data/lib/bel_parser/language/version1/return_types/peptidase_activity.rb +20 -0
  70. data/lib/bel_parser/language/version1/return_types/phosphatase_activity.rb +20 -0
  71. data/lib/bel_parser/language/version1/return_types/products.rb +17 -0
  72. data/lib/bel_parser/language/version1/return_types/protein_abundance.rb +17 -0
  73. data/lib/bel_parser/language/version1/return_types/protein_modification.rb +17 -0
  74. data/lib/bel_parser/language/version1/return_types/reactants.rb +17 -0
  75. data/lib/bel_parser/language/version1/return_types/ribosylation_activity.rb +20 -0
  76. data/lib/bel_parser/language/version1/return_types/rna_abundance.rb +17 -0
  77. data/lib/bel_parser/language/version1/return_types/substitution.rb +17 -0
  78. data/lib/bel_parser/language/version1/return_types/transcriptional_activity.rb +20 -0
  79. data/lib/bel_parser/language/version1/return_types/transport_activity.rb +20 -0
  80. data/lib/bel_parser/language/version1/return_types/truncation.rb +17 -0
  81. data/lib/bel_parser/language/version2.rb +50 -0
  82. data/lib/bel_parser/language/version2/functions/abundance.rb +165 -0
  83. data/lib/bel_parser/language/version2/functions/activity.rb +115 -0
  84. data/lib/bel_parser/language/version2/functions/biological_process.rb +85 -0
  85. data/lib/bel_parser/language/version2/functions/cell_secretion.rb +80 -0
  86. data/lib/bel_parser/language/version2/functions/cell_surface_expression.rb +80 -0
  87. data/lib/bel_parser/language/version2/functions/complex_abundance.rb +190 -0
  88. data/lib/bel_parser/language/version2/functions/composite_abundance.rb +80 -0
  89. data/lib/bel_parser/language/version2/functions/degradation.rb +80 -0
  90. data/lib/bel_parser/language/version2/functions/fragment.rb +119 -0
  91. data/lib/bel_parser/language/version2/functions/from_location.rb +85 -0
  92. data/lib/bel_parser/language/version2/functions/fusion.rb +227 -0
  93. data/lib/bel_parser/language/version2/functions/gene_abundance.rb +195 -0
  94. data/lib/bel_parser/language/version2/functions/list.rb +115 -0
  95. data/lib/bel_parser/language/version2/functions/location.rb +85 -0
  96. data/lib/bel_parser/language/version2/functions/micro_rna_abundance.rb +165 -0
  97. data/lib/bel_parser/language/version2/functions/molecular_activity.rb +83 -0
  98. data/lib/bel_parser/language/version2/functions/pathology.rb +85 -0
  99. data/lib/bel_parser/language/version2/functions/products.rb +80 -0
  100. data/lib/bel_parser/language/version2/functions/protein_abundance.rb +285 -0
  101. data/lib/bel_parser/language/version2/functions/protein_modification.rb +167 -0
  102. data/lib/bel_parser/language/version2/functions/reactants.rb +80 -0
  103. data/lib/bel_parser/language/version2/functions/reaction.rb +85 -0
  104. data/lib/bel_parser/language/version2/functions/rna_abundance.rb +195 -0
  105. data/lib/bel_parser/language/version2/functions/to_location.rb +85 -0
  106. data/lib/bel_parser/language/version2/functions/translocation.rb +90 -0
  107. data/lib/bel_parser/language/version2/functions/variant.rb +83 -0
  108. data/lib/bel_parser/language/version2/return_types/abundance.rb +20 -0
  109. data/lib/bel_parser/language/version2/return_types/activity.rb +20 -0
  110. data/lib/bel_parser/language/version2/return_types/any.rb +74 -0
  111. data/lib/bel_parser/language/version2/return_types/biological_process.rb +17 -0
  112. data/lib/bel_parser/language/version2/return_types/complex_abundance.rb +17 -0
  113. data/lib/bel_parser/language/version2/return_types/fragment.rb +20 -0
  114. data/lib/bel_parser/language/version2/return_types/from_location.rb +20 -0
  115. data/lib/bel_parser/language/version2/return_types/fusion.rb +17 -0
  116. data/lib/bel_parser/language/version2/return_types/gene_abundance.rb +17 -0
  117. data/lib/bel_parser/language/version2/return_types/list.rb +17 -0
  118. data/lib/bel_parser/language/version2/return_types/location.rb +20 -0
  119. data/lib/bel_parser/language/version2/return_types/micro_rna_abundance.rb +17 -0
  120. data/lib/bel_parser/language/version2/return_types/molecular_activity.rb +20 -0
  121. data/lib/bel_parser/language/version2/return_types/pathology.rb +17 -0
  122. data/lib/bel_parser/language/version2/return_types/products.rb +17 -0
  123. data/lib/bel_parser/language/version2/return_types/protein_abundance.rb +17 -0
  124. data/lib/bel_parser/language/version2/return_types/protein_modification.rb +17 -0
  125. data/lib/bel_parser/language/version2/return_types/reactants.rb +17 -0
  126. data/lib/bel_parser/language/version2/return_types/rna_abundance.rb +17 -0
  127. data/lib/bel_parser/language/version2/return_types/to_location.rb +20 -0
  128. data/lib/bel_parser/language/version2/return_types/variant.rb +20 -0
  129. data/lib/bel_parser/mixin/line_continuator.rb +15 -0
  130. data/lib/bel_parser/mixin/line_mapping.rb +14 -0
  131. data/lib/bel_parser/parser.rb +54 -0
  132. data/lib/bel_parser/parsers/ast/mapped_traversal.rb +36 -0
  133. data/lib/bel_parser/parsers/ast/node.rb +705 -0
  134. data/lib/bel_parser/parsers/ast/sexp.rb +8 -0
  135. data/lib/bel_parser/parsers/ast/traversal.rb +21 -0
  136. data/lib/bel_parser/parsers/bel_script.rb +4 -0
  137. data/lib/bel_parser/parsers/bel_script/define_annotation.rb +5476 -0
  138. data/lib/bel_parser/parsers/bel_script/define_annotation.rl +141 -0
  139. data/lib/bel_parser/parsers/bel_script/define_namespace.rb +1780 -0
  140. data/lib/bel_parser/parsers/bel_script/define_namespace.rl +121 -0
  141. data/lib/bel_parser/parsers/bel_script/set.rb +4556 -0
  142. data/lib/bel_parser/parsers/bel_script/set.rl +116 -0
  143. data/lib/bel_parser/parsers/bel_script/unset.rb +706 -0
  144. data/lib/bel_parser/parsers/bel_script/unset.rl +95 -0
  145. data/lib/bel_parser/parsers/common.rb +5 -0
  146. data/lib/bel_parser/parsers/common/blank_line.rb +211 -0
  147. data/lib/bel_parser/parsers/common/blank_line.rl +81 -0
  148. data/lib/bel_parser/parsers/common/comment_line.rb +245 -0
  149. data/lib/bel_parser/parsers/common/comment_line.rl +97 -0
  150. data/lib/bel_parser/parsers/common/common.rb +7 -0
  151. data/lib/bel_parser/parsers/common/common.rl +13 -0
  152. data/lib/bel_parser/parsers/common/identifier.rb +289 -0
  153. data/lib/bel_parser/parsers/common/identifier.rl +106 -0
  154. data/lib/bel_parser/parsers/common/list.rb +2142 -0
  155. data/lib/bel_parser/parsers/common/list.rl +144 -0
  156. data/lib/bel_parser/parsers/common/string.rb +271 -0
  157. data/lib/bel_parser/parsers/common/string.rl +107 -0
  158. data/lib/bel_parser/parsers/expression.rb +7 -0
  159. data/lib/bel_parser/parsers/expression/comment.rb +239 -0
  160. data/lib/bel_parser/parsers/expression/comment.rl +97 -0
  161. data/lib/bel_parser/parsers/expression/parameter.rb +1506 -0
  162. data/lib/bel_parser/parsers/expression/parameter.rl +97 -0
  163. data/lib/bel_parser/parsers/expression/relationship.rb +254 -0
  164. data/lib/bel_parser/parsers/expression/relationship.rl +98 -0
  165. data/lib/bel_parser/parsers/expression/statement_nested.rb +17802 -0
  166. data/lib/bel_parser/parsers/expression/statement_nested.rl +141 -0
  167. data/lib/bel_parser/parsers/expression/statement_observed_term.rb +7291 -0
  168. data/lib/bel_parser/parsers/expression/statement_observed_term.rl +92 -0
  169. data/lib/bel_parser/parsers/expression/statement_simple.rb +10475 -0
  170. data/lib/bel_parser/parsers/expression/statement_simple.rl +112 -0
  171. data/lib/bel_parser/parsers/expression/term.rb +3989 -0
  172. data/lib/bel_parser/parsers/expression/term.rl +157 -0
  173. data/lib/bel_parser/parsers/line_parser.rb +92 -0
  174. data/lib/bel_parser/parsers/mixin/buffer.rb +10 -0
  175. data/lib/bel_parser/parsers/nonblocking_io_wrapper.rb +50 -0
  176. data/lib/bel_parser/script/parser.rb +49 -0
  177. data/lib/bel_parser/vendor/ast.rb +17 -0
  178. data/lib/bel_parser/vendor/ast/node.rb +254 -0
  179. data/lib/bel_parser/vendor/ast/processor.rb +12 -0
  180. data/lib/bel_parser/vendor/ast/processor/mixin.rb +282 -0
  181. data/lib/bel_parser/vendor/ast/sexp.rb +30 -0
  182. metadata +226 -0
@@ -0,0 +1,97 @@
1
+ # begin: ragel
2
+ =begin
3
+ %%{
4
+ machine bel;
5
+
6
+ include 'common.rl';
7
+ include 'identifier.rl';
8
+ include 'string.rl';
9
+
10
+ action prefix {
11
+ @buffers[:parameter] = parameter(prefix(@buffers[:ident]))
12
+ }
13
+
14
+ action string {
15
+ @buffers[:parameter] ||= parameter(prefix(nil))
16
+ @buffers[:parameter] = @buffers[:parameter] << value(@buffers[:string])
17
+ }
18
+
19
+ action ident {
20
+ @buffers[:parameter] ||= parameter(prefix(nil))
21
+ @buffers[:parameter] = @buffers[:parameter] << value(@buffers[:ident])
22
+ }
23
+
24
+ action yield_parameter_ast {
25
+ yield @buffers[:parameter]
26
+ }
27
+
28
+ BEL_PARAMETER = (IDENT ':')? @prefix SP* (STRING %string | IDENT %ident);
29
+ bel_parameter := BEL_PARAMETER %yield_parameter_ast NL;
30
+ }%%
31
+ =end
32
+ # end: ragel
33
+
34
+ require_relative '../ast/node'
35
+ require_relative '../mixin/buffer'
36
+ require_relative '../nonblocking_io_wrapper'
37
+
38
+ module BELParser
39
+ module Parsers
40
+ module Expression
41
+ module Parameter
42
+
43
+ class << self
44
+
45
+ MAX_LENGTH = 1024 * 128 # 128K
46
+
47
+ def parse(content)
48
+ return nil unless content
49
+
50
+ Parser.new(content).each do |obj|
51
+ yield obj
52
+ end
53
+ end
54
+ end
55
+
56
+ private
57
+
58
+ class Parser
59
+ include Enumerable
60
+ include BELParser::Parsers::Buffer
61
+ include BELParser::Parsers::AST::Sexp
62
+
63
+ def initialize(content)
64
+ @content = content
65
+ # begin: ragel
66
+ %% write data;
67
+ # end: ragel
68
+ end
69
+
70
+ def each
71
+ @buffers = {}
72
+ data = @content.unpack('C*')
73
+ p = 0
74
+ pe = data.length
75
+ eof = data.length
76
+
77
+ # begin: ragel
78
+ %% write init;
79
+ %% write exec;
80
+ # end: ragel
81
+ end
82
+ end
83
+ end
84
+ end
85
+ end
86
+ end
87
+
88
+ if __FILE__ == $0
89
+ $stdin.each_line do |line|
90
+ BELParser::Parsers::Expression::Parameter.parse(line) { |obj|
91
+ puts obj.inspect
92
+ }
93
+ end
94
+ end
95
+
96
+ # vim: ft=ruby ts=2 sw=2:
97
+ # encoding: utf-8
@@ -0,0 +1,254 @@
1
+
2
+ # begin: ragel
3
+ =begin
4
+
5
+
6
+ =end
7
+ # end: ragel
8
+
9
+ require_relative '../ast/node'
10
+ require_relative '../mixin/buffer'
11
+ require_relative '../nonblocking_io_wrapper'
12
+
13
+ module BELParser
14
+ module Parsers
15
+ module Expression
16
+ module Relationship
17
+
18
+ class << self
19
+
20
+ MAX_LENGTH = 1024 * 128 # 128K
21
+
22
+ def parse(content)
23
+ return nil unless content
24
+
25
+ Parser.new(content).each do |obj|
26
+ yield obj
27
+ end
28
+ end
29
+ end
30
+
31
+ private
32
+
33
+ class Parser
34
+ include Enumerable
35
+ include BELParser::Parsers::Buffer
36
+ include BELParser::Parsers::AST::Sexp
37
+
38
+ def initialize(content)
39
+ @content = content
40
+ # begin: ragel
41
+
42
+ class << self
43
+ attr_accessor :_bel_trans_keys
44
+ private :_bel_trans_keys, :_bel_trans_keys=
45
+ end
46
+ self._bel_trans_keys = [
47
+ 0, 0, 33, 126, 10, 126,
48
+ 0, 0, 0
49
+ ]
50
+
51
+ class << self
52
+ attr_accessor :_bel_key_spans
53
+ private :_bel_key_spans, :_bel_key_spans=
54
+ end
55
+ self._bel_key_spans = [
56
+ 0, 94, 117, 0
57
+ ]
58
+
59
+ class << self
60
+ attr_accessor :_bel_index_offsets
61
+ private :_bel_index_offsets, :_bel_index_offsets=
62
+ end
63
+ self._bel_index_offsets = [
64
+ 0, 0, 95, 213
65
+ ]
66
+
67
+ class << self
68
+ attr_accessor :_bel_indicies
69
+ private :_bel_indicies, :_bel_indicies=
70
+ end
71
+ self._bel_indicies = [
72
+ 0, 0, 0, 0, 0, 0, 0, 0,
73
+ 0, 0, 0, 0, 0, 0, 0, 0,
74
+ 0, 0, 0, 0, 0, 0, 0, 0,
75
+ 0, 0, 0, 0, 0, 0, 0, 0,
76
+ 0, 0, 0, 0, 0, 0, 0, 0,
77
+ 0, 0, 0, 0, 0, 0, 0, 0,
78
+ 0, 0, 0, 0, 0, 0, 0, 0,
79
+ 0, 0, 0, 0, 0, 0, 0, 0,
80
+ 0, 0, 0, 0, 0, 0, 0, 0,
81
+ 0, 0, 0, 0, 0, 0, 0, 0,
82
+ 0, 0, 0, 0, 0, 0, 0, 0,
83
+ 0, 0, 0, 0, 0, 0, 1, 2,
84
+ 1, 1, 1, 1, 1, 1, 1, 1,
85
+ 1, 1, 1, 1, 1, 1, 1, 1,
86
+ 1, 1, 1, 1, 1, 1, 3, 3,
87
+ 3, 3, 3, 3, 3, 3, 3, 3,
88
+ 3, 3, 3, 3, 3, 3, 3, 3,
89
+ 3, 3, 3, 3, 3, 3, 3, 3,
90
+ 3, 3, 3, 3, 3, 3, 3, 3,
91
+ 3, 3, 3, 3, 3, 3, 3, 3,
92
+ 3, 3, 3, 3, 3, 3, 3, 3,
93
+ 3, 3, 3, 3, 3, 3, 3, 3,
94
+ 3, 3, 3, 3, 3, 3, 3, 3,
95
+ 3, 3, 3, 3, 3, 3, 3, 3,
96
+ 3, 3, 3, 3, 3, 3, 3, 3,
97
+ 3, 3, 3, 3, 3, 3, 3, 3,
98
+ 3, 3, 3, 3, 1, 1, 0
99
+ ]
100
+
101
+ class << self
102
+ attr_accessor :_bel_trans_targs
103
+ private :_bel_trans_targs, :_bel_trans_targs=
104
+ end
105
+ self._bel_trans_targs = [
106
+ 2, 0, 3, 2
107
+ ]
108
+
109
+ class << self
110
+ attr_accessor :_bel_trans_actions
111
+ private :_bel_trans_actions, :_bel_trans_actions=
112
+ end
113
+ self._bel_trans_actions = [
114
+ 1, 0, 2, 3
115
+ ]
116
+
117
+ class << self
118
+ attr_accessor :bel_start
119
+ end
120
+ self.bel_start = 1;
121
+ class << self
122
+ attr_accessor :bel_first_final
123
+ end
124
+ self.bel_first_final = 3;
125
+ class << self
126
+ attr_accessor :bel_error
127
+ end
128
+ self.bel_error = 0;
129
+
130
+ class << self
131
+ attr_accessor :bel_en_relationship
132
+ end
133
+ self.bel_en_relationship = 1;
134
+
135
+
136
+ # end: ragel
137
+ end
138
+
139
+ def each
140
+ @buffers = {}
141
+ stack = []
142
+ data = @content.unpack('C*')
143
+ p = 0
144
+ pe = data.length
145
+
146
+ # begin: ragel
147
+
148
+ begin
149
+ p ||= 0
150
+ pe ||= data.length
151
+ cs = bel_start
152
+ end
153
+
154
+
155
+ begin
156
+ testEof = false
157
+ _slen, _trans, _keys, _inds, _acts, _nacts = nil
158
+ _goto_level = 0
159
+ _resume = 10
160
+ _eof_trans = 15
161
+ _again = 20
162
+ _test_eof = 30
163
+ _out = 40
164
+ while true
165
+ if _goto_level <= 0
166
+ if p == pe
167
+ _goto_level = _test_eof
168
+ next
169
+ end
170
+ if cs == 0
171
+ _goto_level = _out
172
+ next
173
+ end
174
+ end
175
+ if _goto_level <= _resume
176
+ _keys = cs << 1
177
+ _inds = _bel_index_offsets[cs]
178
+ _slen = _bel_key_spans[cs]
179
+ _wide = data[p].ord
180
+ _trans = if ( _slen > 0 &&
181
+ _bel_trans_keys[_keys] <= _wide &&
182
+ _wide <= _bel_trans_keys[_keys + 1]
183
+ ) then
184
+ _bel_indicies[ _inds + _wide - _bel_trans_keys[_keys] ]
185
+ else
186
+ _bel_indicies[ _inds + _slen ]
187
+ end
188
+ cs = _bel_trans_targs[_trans]
189
+ if _bel_trans_actions[_trans] != 0
190
+ case _bel_trans_actions[_trans]
191
+ when 3 then
192
+ begin
193
+
194
+ @buffers[:relationship] << data[p].ord
195
+ end
196
+ when 1 then
197
+ begin
198
+
199
+ @buffers[:relationship] = []
200
+ end
201
+ begin
202
+
203
+ @buffers[:relationship] << data[p].ord
204
+ end
205
+ when 2 then
206
+ begin
207
+
208
+ @buffers[:relationship] = relationship(
209
+ utf8_string(@buffers[:relationship]))
210
+ end
211
+ begin
212
+
213
+ yield @buffers[:relationship]
214
+ end
215
+ end
216
+ end
217
+ end
218
+ if _goto_level <= _again
219
+ if cs == 0
220
+ _goto_level = _out
221
+ next
222
+ end
223
+ p += 1
224
+ if p != pe
225
+ _goto_level = _resume
226
+ next
227
+ end
228
+ end
229
+ if _goto_level <= _test_eof
230
+ end
231
+ if _goto_level <= _out
232
+ break
233
+ end
234
+ end
235
+ end
236
+
237
+ # end: ragel
238
+ end
239
+ end
240
+ end
241
+ end
242
+ end
243
+ end
244
+
245
+ if __FILE__ == $0
246
+ $stdin.each_line do |line|
247
+ BELParser::Parsers::Expression::Relationship.parse(line) { |obj|
248
+ puts obj.inspect
249
+ }
250
+ end
251
+ end
252
+
253
+ # vim: ft=ruby ts=2 sw=2:
254
+ # encoding: utf-8
@@ -0,0 +1,98 @@
1
+ # begin: ragel
2
+ =begin
3
+ %%{
4
+ machine bel;
5
+
6
+ include 'common.rl';
7
+
8
+ action start_relationship {
9
+ @buffers[:relationship] = []
10
+ }
11
+
12
+ action append_relationship {
13
+ @buffers[:relationship] << fc
14
+ }
15
+
16
+ action finish_relationship {
17
+ @buffers[:relationship] = relationship(
18
+ utf8_string(@buffers[:relationship]))
19
+ }
20
+
21
+ action yield_relationship {
22
+ yield @buffers[:relationship]
23
+ }
24
+
25
+ RELATIONSHIP =
26
+ (0x21..0x7e)+ >start_relationship $append_relationship %finish_relationship;
27
+
28
+ relationship :=
29
+ RELATIONSHIP %yield_relationship
30
+ NL;
31
+ }%%
32
+ =end
33
+ # end: ragel
34
+
35
+ require_relative '../ast/node'
36
+ require_relative '../mixin/buffer'
37
+ require_relative '../nonblocking_io_wrapper'
38
+
39
+ module BELParser
40
+ module Parsers
41
+ module Expression
42
+ module Relationship
43
+
44
+ class << self
45
+
46
+ MAX_LENGTH = 1024 * 128 # 128K
47
+
48
+ def parse(content)
49
+ return nil unless content
50
+
51
+ Parser.new(content).each do |obj|
52
+ yield obj
53
+ end
54
+ end
55
+ end
56
+
57
+ private
58
+
59
+ class Parser
60
+ include Enumerable
61
+ include BELParser::Parsers::Buffer
62
+ include BELParser::Parsers::AST::Sexp
63
+
64
+ def initialize(content)
65
+ @content = content
66
+ # begin: ragel
67
+ %% write data;
68
+ # end: ragel
69
+ end
70
+
71
+ def each
72
+ @buffers = {}
73
+ stack = []
74
+ data = @content.unpack('C*')
75
+ p = 0
76
+ pe = data.length
77
+
78
+ # begin: ragel
79
+ %% write init;
80
+ %% write exec;
81
+ # end: ragel
82
+ end
83
+ end
84
+ end
85
+ end
86
+ end
87
+ end
88
+
89
+ if __FILE__ == $0
90
+ $stdin.each_line do |line|
91
+ BELParser::Parsers::Expression::Relationship.parse(line) { |obj|
92
+ puts obj.inspect
93
+ }
94
+ end
95
+ end
96
+
97
+ # vim: ft=ruby ts=2 sw=2:
98
+ # encoding: utf-8