bel_parser 1.0.0.alpha.1

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Files changed (182) hide show
  1. checksums.yaml +7 -0
  2. data/.gemspec +28 -0
  3. data/CHANGELOG.md +10 -0
  4. data/LICENSE +191 -0
  5. data/README.md +9 -0
  6. data/VERSION +1 -0
  7. data/bin/bel2_termcheck +39 -0
  8. data/lib/bel_parser.rb +17 -0
  9. data/lib/bel_parser/ast_filter.rb +27 -0
  10. data/lib/bel_parser/ast_generator.rb +86 -0
  11. data/lib/bel_parser/ast_validator.rb +40 -0
  12. data/lib/bel_parser/expression/parser.rb +42 -0
  13. data/lib/bel_parser/expression/term_semantics.rb +36 -0
  14. data/lib/bel_parser/language.rb +7 -0
  15. data/lib/bel_parser/language/function.rb +59 -0
  16. data/lib/bel_parser/language/quoting.rb +236 -0
  17. data/lib/bel_parser/language/semantic_ast.rb +604 -0
  18. data/lib/bel_parser/language/semantics/analyzer.rb +59 -0
  19. data/lib/bel_parser/language/signature.rb +39 -0
  20. data/lib/bel_parser/language/specification.rb +49 -0
  21. data/lib/bel_parser/language/syntax/expression/incomplete_node.rb +14 -0
  22. data/lib/bel_parser/language/syntax/expression/invalid_term_function.rb +22 -0
  23. data/lib/bel_parser/language/version1.rb +50 -0
  24. data/lib/bel_parser/language/version1/functions/abundance.rb +85 -0
  25. data/lib/bel_parser/language/version1/functions/biological_process.rb +85 -0
  26. data/lib/bel_parser/language/version1/functions/catalytic_activity.rb +110 -0
  27. data/lib/bel_parser/language/version1/functions/cell_secretion.rb +80 -0
  28. data/lib/bel_parser/language/version1/functions/cell_surface_expression.rb +80 -0
  29. data/lib/bel_parser/language/version1/functions/chaperone_activity.rb +110 -0
  30. data/lib/bel_parser/language/version1/functions/complex_abundance.rb +115 -0
  31. data/lib/bel_parser/language/version1/functions/composite_abundance.rb +80 -0
  32. data/lib/bel_parser/language/version1/functions/degradation.rb +80 -0
  33. data/lib/bel_parser/language/version1/functions/fusion.rb +302 -0
  34. data/lib/bel_parser/language/version1/functions/gene_abundance.rb +125 -0
  35. data/lib/bel_parser/language/version1/functions/gtp_bound_activity.rb +110 -0
  36. data/lib/bel_parser/language/version1/functions/kinase_activity.rb +110 -0
  37. data/lib/bel_parser/language/version1/functions/list.rb +115 -0
  38. data/lib/bel_parser/language/version1/functions/micro_rna_abundance.rb +85 -0
  39. data/lib/bel_parser/language/version1/functions/molecular_activity.rb +80 -0
  40. data/lib/bel_parser/language/version1/functions/pathology.rb +85 -0
  41. data/lib/bel_parser/language/version1/functions/peptidase_activity.rb +110 -0
  42. data/lib/bel_parser/language/version1/functions/phosphatase_activity.rb +110 -0
  43. data/lib/bel_parser/language/version1/functions/products.rb +80 -0
  44. data/lib/bel_parser/language/version1/functions/protein_abundance.rb +245 -0
  45. data/lib/bel_parser/language/version1/functions/protein_modification.rb +167 -0
  46. data/lib/bel_parser/language/version1/functions/reactants.rb +80 -0
  47. data/lib/bel_parser/language/version1/functions/reaction.rb +85 -0
  48. data/lib/bel_parser/language/version1/functions/ribosylation_activity.rb +110 -0
  49. data/lib/bel_parser/language/version1/functions/rna_abundance.rb +125 -0
  50. data/lib/bel_parser/language/version1/functions/substitution.rb +96 -0
  51. data/lib/bel_parser/language/version1/functions/transcriptional_activity.rb +110 -0
  52. data/lib/bel_parser/language/version1/functions/translocation.rb +100 -0
  53. data/lib/bel_parser/language/version1/functions/transport_activity.rb +110 -0
  54. data/lib/bel_parser/language/version1/functions/truncation.rb +82 -0
  55. data/lib/bel_parser/language/version1/return_types/abundance.rb +20 -0
  56. data/lib/bel_parser/language/version1/return_types/any.rb +74 -0
  57. data/lib/bel_parser/language/version1/return_types/biological_process.rb +17 -0
  58. data/lib/bel_parser/language/version1/return_types/catalytic_activity.rb +20 -0
  59. data/lib/bel_parser/language/version1/return_types/chaperone_activity.rb +20 -0
  60. data/lib/bel_parser/language/version1/return_types/complex_abundance.rb +17 -0
  61. data/lib/bel_parser/language/version1/return_types/fusion.rb +17 -0
  62. data/lib/bel_parser/language/version1/return_types/gene_abundance.rb +17 -0
  63. data/lib/bel_parser/language/version1/return_types/gtp_bound_activity.rb +20 -0
  64. data/lib/bel_parser/language/version1/return_types/kinase_activity.rb +20 -0
  65. data/lib/bel_parser/language/version1/return_types/list.rb +17 -0
  66. data/lib/bel_parser/language/version1/return_types/micro_rna_abundance.rb +17 -0
  67. data/lib/bel_parser/language/version1/return_types/molecular_activity.rb +20 -0
  68. data/lib/bel_parser/language/version1/return_types/pathology.rb +17 -0
  69. data/lib/bel_parser/language/version1/return_types/peptidase_activity.rb +20 -0
  70. data/lib/bel_parser/language/version1/return_types/phosphatase_activity.rb +20 -0
  71. data/lib/bel_parser/language/version1/return_types/products.rb +17 -0
  72. data/lib/bel_parser/language/version1/return_types/protein_abundance.rb +17 -0
  73. data/lib/bel_parser/language/version1/return_types/protein_modification.rb +17 -0
  74. data/lib/bel_parser/language/version1/return_types/reactants.rb +17 -0
  75. data/lib/bel_parser/language/version1/return_types/ribosylation_activity.rb +20 -0
  76. data/lib/bel_parser/language/version1/return_types/rna_abundance.rb +17 -0
  77. data/lib/bel_parser/language/version1/return_types/substitution.rb +17 -0
  78. data/lib/bel_parser/language/version1/return_types/transcriptional_activity.rb +20 -0
  79. data/lib/bel_parser/language/version1/return_types/transport_activity.rb +20 -0
  80. data/lib/bel_parser/language/version1/return_types/truncation.rb +17 -0
  81. data/lib/bel_parser/language/version2.rb +50 -0
  82. data/lib/bel_parser/language/version2/functions/abundance.rb +165 -0
  83. data/lib/bel_parser/language/version2/functions/activity.rb +115 -0
  84. data/lib/bel_parser/language/version2/functions/biological_process.rb +85 -0
  85. data/lib/bel_parser/language/version2/functions/cell_secretion.rb +80 -0
  86. data/lib/bel_parser/language/version2/functions/cell_surface_expression.rb +80 -0
  87. data/lib/bel_parser/language/version2/functions/complex_abundance.rb +190 -0
  88. data/lib/bel_parser/language/version2/functions/composite_abundance.rb +80 -0
  89. data/lib/bel_parser/language/version2/functions/degradation.rb +80 -0
  90. data/lib/bel_parser/language/version2/functions/fragment.rb +119 -0
  91. data/lib/bel_parser/language/version2/functions/from_location.rb +85 -0
  92. data/lib/bel_parser/language/version2/functions/fusion.rb +227 -0
  93. data/lib/bel_parser/language/version2/functions/gene_abundance.rb +195 -0
  94. data/lib/bel_parser/language/version2/functions/list.rb +115 -0
  95. data/lib/bel_parser/language/version2/functions/location.rb +85 -0
  96. data/lib/bel_parser/language/version2/functions/micro_rna_abundance.rb +165 -0
  97. data/lib/bel_parser/language/version2/functions/molecular_activity.rb +83 -0
  98. data/lib/bel_parser/language/version2/functions/pathology.rb +85 -0
  99. data/lib/bel_parser/language/version2/functions/products.rb +80 -0
  100. data/lib/bel_parser/language/version2/functions/protein_abundance.rb +285 -0
  101. data/lib/bel_parser/language/version2/functions/protein_modification.rb +167 -0
  102. data/lib/bel_parser/language/version2/functions/reactants.rb +80 -0
  103. data/lib/bel_parser/language/version2/functions/reaction.rb +85 -0
  104. data/lib/bel_parser/language/version2/functions/rna_abundance.rb +195 -0
  105. data/lib/bel_parser/language/version2/functions/to_location.rb +85 -0
  106. data/lib/bel_parser/language/version2/functions/translocation.rb +90 -0
  107. data/lib/bel_parser/language/version2/functions/variant.rb +83 -0
  108. data/lib/bel_parser/language/version2/return_types/abundance.rb +20 -0
  109. data/lib/bel_parser/language/version2/return_types/activity.rb +20 -0
  110. data/lib/bel_parser/language/version2/return_types/any.rb +74 -0
  111. data/lib/bel_parser/language/version2/return_types/biological_process.rb +17 -0
  112. data/lib/bel_parser/language/version2/return_types/complex_abundance.rb +17 -0
  113. data/lib/bel_parser/language/version2/return_types/fragment.rb +20 -0
  114. data/lib/bel_parser/language/version2/return_types/from_location.rb +20 -0
  115. data/lib/bel_parser/language/version2/return_types/fusion.rb +17 -0
  116. data/lib/bel_parser/language/version2/return_types/gene_abundance.rb +17 -0
  117. data/lib/bel_parser/language/version2/return_types/list.rb +17 -0
  118. data/lib/bel_parser/language/version2/return_types/location.rb +20 -0
  119. data/lib/bel_parser/language/version2/return_types/micro_rna_abundance.rb +17 -0
  120. data/lib/bel_parser/language/version2/return_types/molecular_activity.rb +20 -0
  121. data/lib/bel_parser/language/version2/return_types/pathology.rb +17 -0
  122. data/lib/bel_parser/language/version2/return_types/products.rb +17 -0
  123. data/lib/bel_parser/language/version2/return_types/protein_abundance.rb +17 -0
  124. data/lib/bel_parser/language/version2/return_types/protein_modification.rb +17 -0
  125. data/lib/bel_parser/language/version2/return_types/reactants.rb +17 -0
  126. data/lib/bel_parser/language/version2/return_types/rna_abundance.rb +17 -0
  127. data/lib/bel_parser/language/version2/return_types/to_location.rb +20 -0
  128. data/lib/bel_parser/language/version2/return_types/variant.rb +20 -0
  129. data/lib/bel_parser/mixin/line_continuator.rb +15 -0
  130. data/lib/bel_parser/mixin/line_mapping.rb +14 -0
  131. data/lib/bel_parser/parser.rb +54 -0
  132. data/lib/bel_parser/parsers/ast/mapped_traversal.rb +36 -0
  133. data/lib/bel_parser/parsers/ast/node.rb +705 -0
  134. data/lib/bel_parser/parsers/ast/sexp.rb +8 -0
  135. data/lib/bel_parser/parsers/ast/traversal.rb +21 -0
  136. data/lib/bel_parser/parsers/bel_script.rb +4 -0
  137. data/lib/bel_parser/parsers/bel_script/define_annotation.rb +5476 -0
  138. data/lib/bel_parser/parsers/bel_script/define_annotation.rl +141 -0
  139. data/lib/bel_parser/parsers/bel_script/define_namespace.rb +1780 -0
  140. data/lib/bel_parser/parsers/bel_script/define_namespace.rl +121 -0
  141. data/lib/bel_parser/parsers/bel_script/set.rb +4556 -0
  142. data/lib/bel_parser/parsers/bel_script/set.rl +116 -0
  143. data/lib/bel_parser/parsers/bel_script/unset.rb +706 -0
  144. data/lib/bel_parser/parsers/bel_script/unset.rl +95 -0
  145. data/lib/bel_parser/parsers/common.rb +5 -0
  146. data/lib/bel_parser/parsers/common/blank_line.rb +211 -0
  147. data/lib/bel_parser/parsers/common/blank_line.rl +81 -0
  148. data/lib/bel_parser/parsers/common/comment_line.rb +245 -0
  149. data/lib/bel_parser/parsers/common/comment_line.rl +97 -0
  150. data/lib/bel_parser/parsers/common/common.rb +7 -0
  151. data/lib/bel_parser/parsers/common/common.rl +13 -0
  152. data/lib/bel_parser/parsers/common/identifier.rb +289 -0
  153. data/lib/bel_parser/parsers/common/identifier.rl +106 -0
  154. data/lib/bel_parser/parsers/common/list.rb +2142 -0
  155. data/lib/bel_parser/parsers/common/list.rl +144 -0
  156. data/lib/bel_parser/parsers/common/string.rb +271 -0
  157. data/lib/bel_parser/parsers/common/string.rl +107 -0
  158. data/lib/bel_parser/parsers/expression.rb +7 -0
  159. data/lib/bel_parser/parsers/expression/comment.rb +239 -0
  160. data/lib/bel_parser/parsers/expression/comment.rl +97 -0
  161. data/lib/bel_parser/parsers/expression/parameter.rb +1506 -0
  162. data/lib/bel_parser/parsers/expression/parameter.rl +97 -0
  163. data/lib/bel_parser/parsers/expression/relationship.rb +254 -0
  164. data/lib/bel_parser/parsers/expression/relationship.rl +98 -0
  165. data/lib/bel_parser/parsers/expression/statement_nested.rb +17802 -0
  166. data/lib/bel_parser/parsers/expression/statement_nested.rl +141 -0
  167. data/lib/bel_parser/parsers/expression/statement_observed_term.rb +7291 -0
  168. data/lib/bel_parser/parsers/expression/statement_observed_term.rl +92 -0
  169. data/lib/bel_parser/parsers/expression/statement_simple.rb +10475 -0
  170. data/lib/bel_parser/parsers/expression/statement_simple.rl +112 -0
  171. data/lib/bel_parser/parsers/expression/term.rb +3989 -0
  172. data/lib/bel_parser/parsers/expression/term.rl +157 -0
  173. data/lib/bel_parser/parsers/line_parser.rb +92 -0
  174. data/lib/bel_parser/parsers/mixin/buffer.rb +10 -0
  175. data/lib/bel_parser/parsers/nonblocking_io_wrapper.rb +50 -0
  176. data/lib/bel_parser/script/parser.rb +49 -0
  177. data/lib/bel_parser/vendor/ast.rb +17 -0
  178. data/lib/bel_parser/vendor/ast/node.rb +254 -0
  179. data/lib/bel_parser/vendor/ast/processor.rb +12 -0
  180. data/lib/bel_parser/vendor/ast/processor/mixin.rb +282 -0
  181. data/lib/bel_parser/vendor/ast/sexp.rb +30 -0
  182. metadata +226 -0
@@ -0,0 +1,95 @@
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+ # begin: ragel
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+ =begin
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+ %%{
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+ machine bel;
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+
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+ include 'common.rl';
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+ include 'identifier.rl';
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+
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+ UNSET = [uU][nN][sS][eE][tT];
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+
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+ action unset_keyword {
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+ @buffers[:unset] = unset()
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+ }
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+
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+ action name {
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+ @buffers[:unset] = @buffers[:unset] << name(@buffers[:ident])
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+ }
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+
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+ action yield_set {
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+ yield @buffers[:unset]
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+ }
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+
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+ unset :=
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+ UNSET %unset_keyword
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+ SP+
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+ IDENT %name
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+ NL @yield_set;
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+ }%%
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+ =end
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+ # end: ragel
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+
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+ require_relative '../ast/node'
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+ require_relative '../mixin/buffer'
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+ require_relative '../nonblocking_io_wrapper'
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+
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+ module BELParser
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+ module Parsers
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+ module BELScript
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+ module Unset
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+
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+ class << self
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+
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+ MAX_LENGTH = 1024 * 128 # 128K
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+
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+ def parse(content)
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+ return nil unless content
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+
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+ Parser.new(content).each do |obj|
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+ yield obj
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+ end
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+ end
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+ end
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+
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+ private
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+
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+ class Parser
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+ include Enumerable
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+ include BELParser::Parsers::Buffer
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+ include BELParser::Parsers::AST::Sexp
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+
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+ def initialize(content)
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+ @content = content
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+ # begin: ragel
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+ %% write data;
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+ # end: ragel
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+ end
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+
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+ def each
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+ @buffers = {}
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+ data = @content.unpack('C*')
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+ p = 0
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+ pe = data.length
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+ eof = data.length
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+
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+ # begin: ragel
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+ %% write init;
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+ %% write exec;
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+ # end: ragel
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+ end
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+ end
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+ end
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+ end
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+ end
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+ end
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+
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+ if __FILE__ == $0
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+ $stdin.each_line do |line|
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+ BELParser::Parsers::BELScript::Unset.parse(line) { |obj|
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+ puts obj.inspect
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+ }
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+ end
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+ end
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+
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+ # vim: ft=ruby ts=2 sw=2:
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+ # encoding: utf-8
@@ -0,0 +1,5 @@
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+ require_relative 'common/blank_line'
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+ require_relative 'common/comment_line'
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+ require_relative 'common/identifier'
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+ require_relative 'common/string'
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+ require_relative 'common/list'
@@ -0,0 +1,211 @@
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+
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+ # begin: ragel
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+ =begin
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+
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+
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+ =end
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+ # end: ragel
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+
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+ require_relative '../ast/node'
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+ require_relative '../mixin/buffer'
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+ require_relative '../nonblocking_io_wrapper'
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+
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+ module BELParser
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+ module Parsers
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+ module Common
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+ module BlankLine
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+
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+ class << self
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+
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+ MAX_LENGTH = 1024 * 128 # 128K
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+
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+ def parse(content)
23
+ return nil unless content
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+
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+ Parser.new(content).each do |obj|
26
+ yield obj
27
+ end
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+ end
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+ end
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+
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+ private
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+
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+ class Parser
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+ include Enumerable
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+ include BELParser::Parsers::Buffer
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+ include BELParser::Parsers::AST::Sexp
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+
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+ def initialize(content)
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+ @content = content
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+ # begin: ragel
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+
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+ class << self
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+ attr_accessor :_bel_trans_keys
44
+ private :_bel_trans_keys, :_bel_trans_keys=
45
+ end
46
+ self._bel_trans_keys = [
47
+ 0, 0, 9, 32, 0, 0,
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+ 0
49
+ ]
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+
51
+ class << self
52
+ attr_accessor :_bel_key_spans
53
+ private :_bel_key_spans, :_bel_key_spans=
54
+ end
55
+ self._bel_key_spans = [
56
+ 0, 24, 0
57
+ ]
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+
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+ class << self
60
+ attr_accessor :_bel_index_offsets
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+ private :_bel_index_offsets, :_bel_index_offsets=
62
+ end
63
+ self._bel_index_offsets = [
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+ 0, 0, 25
65
+ ]
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+
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+ class << self
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+ attr_accessor :_bel_indicies
69
+ private :_bel_indicies, :_bel_indicies=
70
+ end
71
+ self._bel_indicies = [
72
+ 0, 2, 1, 1, 1, 1, 1, 1,
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+ 1, 1, 1, 1, 1, 1, 1, 1,
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+ 1, 1, 1, 1, 1, 1, 1, 0,
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+ 1, 1, 0
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+ ]
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+
78
+ class << self
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+ attr_accessor :_bel_trans_targs
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+ private :_bel_trans_targs, :_bel_trans_targs=
81
+ end
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+ self._bel_trans_targs = [
83
+ 1, 0, 2
84
+ ]
85
+
86
+ class << self
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+ attr_accessor :_bel_trans_actions
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+ private :_bel_trans_actions, :_bel_trans_actions=
89
+ end
90
+ self._bel_trans_actions = [
91
+ 0, 0, 1
92
+ ]
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+
94
+ class << self
95
+ attr_accessor :bel_start
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+ end
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+ self.bel_start = 1;
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+ class << self
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+ attr_accessor :bel_first_final
100
+ end
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+ self.bel_first_final = 2;
102
+ class << self
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+ attr_accessor :bel_error
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+ end
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+ self.bel_error = 0;
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+
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+ class << self
108
+ attr_accessor :bel_en_blank
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+ end
110
+ self.bel_en_blank = 1;
111
+
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+
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+ # end: ragel
114
+ end
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+
116
+ def each
117
+ @buffers = {}
118
+ data = @content.unpack('C*')
119
+ p = 0
120
+ pe = data.length
121
+
122
+ # begin: ragel
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+
124
+ begin
125
+ p ||= 0
126
+ pe ||= data.length
127
+ cs = bel_start
128
+ end
129
+
130
+
131
+ begin
132
+ testEof = false
133
+ _slen, _trans, _keys, _inds, _acts, _nacts = nil
134
+ _goto_level = 0
135
+ _resume = 10
136
+ _eof_trans = 15
137
+ _again = 20
138
+ _test_eof = 30
139
+ _out = 40
140
+ while true
141
+ if _goto_level <= 0
142
+ if p == pe
143
+ _goto_level = _test_eof
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+ next
145
+ end
146
+ if cs == 0
147
+ _goto_level = _out
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+ next
149
+ end
150
+ end
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+ if _goto_level <= _resume
152
+ _keys = cs << 1
153
+ _inds = _bel_index_offsets[cs]
154
+ _slen = _bel_key_spans[cs]
155
+ _wide = data[p].ord
156
+ _trans = if ( _slen > 0 &&
157
+ _bel_trans_keys[_keys] <= _wide &&
158
+ _wide <= _bel_trans_keys[_keys + 1]
159
+ ) then
160
+ _bel_indicies[ _inds + _wide - _bel_trans_keys[_keys] ]
161
+ else
162
+ _bel_indicies[ _inds + _slen ]
163
+ end
164
+ cs = _bel_trans_targs[_trans]
165
+ if _bel_trans_actions[_trans] != 0
166
+ case _bel_trans_actions[_trans]
167
+ when 1 then
168
+ begin
169
+
170
+ yield blank_line
171
+ end
172
+ end
173
+ end
174
+ end
175
+ if _goto_level <= _again
176
+ if cs == 0
177
+ _goto_level = _out
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+ next
179
+ end
180
+ p += 1
181
+ if p != pe
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+ _goto_level = _resume
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+ next
184
+ end
185
+ end
186
+ if _goto_level <= _test_eof
187
+ end
188
+ if _goto_level <= _out
189
+ break
190
+ end
191
+ end
192
+ end
193
+
194
+ # end: ragel
195
+ end
196
+ end
197
+ end
198
+ end
199
+ end
200
+ end
201
+
202
+ if __FILE__ == $0
203
+ $stdin.each_line do |line|
204
+ BELParser::Parsers::Common::BlankLine.parse(line) { |obj|
205
+ puts obj.inspect
206
+ }
207
+ end
208
+ end
209
+
210
+ # vim: ft=ruby ts=2 sw=2:
211
+ # encoding: utf-8
@@ -0,0 +1,81 @@
1
+ # begin: ragel
2
+ =begin
3
+ %%{
4
+ machine bel;
5
+
6
+ include 'common.rl';
7
+
8
+ action yield_blank_line {
9
+ yield blank_line
10
+ }
11
+
12
+ BLANK = SP*;
13
+
14
+ blank := BLANK %yield_blank_line NL;
15
+ }%%
16
+ =end
17
+ # end: ragel
18
+
19
+ require_relative '../ast/node'
20
+ require_relative '../mixin/buffer'
21
+ require_relative '../nonblocking_io_wrapper'
22
+
23
+ module BELParser
24
+ module Parsers
25
+ module Common
26
+ module BlankLine
27
+
28
+ class << self
29
+
30
+ MAX_LENGTH = 1024 * 128 # 128K
31
+
32
+ def parse(content)
33
+ return nil unless content
34
+
35
+ Parser.new(content).each do |obj|
36
+ yield obj
37
+ end
38
+ end
39
+ end
40
+
41
+ private
42
+
43
+ class Parser
44
+ include Enumerable
45
+ include BELParser::Parsers::Buffer
46
+ include BELParser::Parsers::AST::Sexp
47
+
48
+ def initialize(content)
49
+ @content = content
50
+ # begin: ragel
51
+ %% write data;
52
+ # end: ragel
53
+ end
54
+
55
+ def each
56
+ @buffers = {}
57
+ data = @content.unpack('C*')
58
+ p = 0
59
+ pe = data.length
60
+
61
+ # begin: ragel
62
+ %% write init;
63
+ %% write exec;
64
+ # end: ragel
65
+ end
66
+ end
67
+ end
68
+ end
69
+ end
70
+ end
71
+
72
+ if __FILE__ == $0
73
+ $stdin.each_line do |line|
74
+ BELParser::Parsers::Common::BlankLine.parse(line) { |obj|
75
+ puts obj.inspect
76
+ }
77
+ end
78
+ end
79
+
80
+ # vim: ft=ruby ts=2 sw=2:
81
+ # encoding: utf-8
@@ -0,0 +1,245 @@
1
+
2
+ # begin: ragel
3
+ =begin
4
+
5
+
6
+ =end
7
+ # end: ragel
8
+
9
+ require_relative '../ast/node'
10
+ require_relative '../mixin/buffer'
11
+ require_relative '../nonblocking_io_wrapper'
12
+
13
+ module BELParser
14
+ module Parsers
15
+ module Common
16
+ module CommentLine
17
+
18
+ class << self
19
+
20
+ MAX_LENGTH = 1024 * 128 # 128K
21
+
22
+ def parse(content)
23
+ return nil unless content
24
+
25
+ Parser.new(content).each do |obj|
26
+ yield obj
27
+ end
28
+ end
29
+ end
30
+
31
+ private
32
+
33
+ class Parser
34
+ include Enumerable
35
+ include BELParser::Parsers::Buffer
36
+ include BELParser::Parsers::AST::Sexp
37
+
38
+ def initialize(content)
39
+ @content = content
40
+ # begin: ragel
41
+
42
+ class << self
43
+ attr_accessor :_bel_trans_keys
44
+ private :_bel_trans_keys, :_bel_trans_keys=
45
+ end
46
+ self._bel_trans_keys = [
47
+ 0, 0, 9, 35, 10, 10,
48
+ 10, 10, 0, 0, 0
49
+ ]
50
+
51
+ class << self
52
+ attr_accessor :_bel_key_spans
53
+ private :_bel_key_spans, :_bel_key_spans=
54
+ end
55
+ self._bel_key_spans = [
56
+ 0, 27, 1, 1, 0
57
+ ]
58
+
59
+ class << self
60
+ attr_accessor :_bel_index_offsets
61
+ private :_bel_index_offsets, :_bel_index_offsets=
62
+ end
63
+ self._bel_index_offsets = [
64
+ 0, 0, 28, 30, 32
65
+ ]
66
+
67
+ class << self
68
+ attr_accessor :_bel_indicies
69
+ private :_bel_indicies, :_bel_indicies=
70
+ end
71
+ self._bel_indicies = [
72
+ 0, 1, 1, 1, 1, 1, 1, 1,
73
+ 1, 1, 1, 1, 1, 1, 1, 1,
74
+ 1, 1, 1, 1, 1, 1, 1, 0,
75
+ 1, 1, 2, 1, 4, 3, 6, 5,
76
+ 1, 0
77
+ ]
78
+
79
+ class << self
80
+ attr_accessor :_bel_trans_targs
81
+ private :_bel_trans_targs, :_bel_trans_targs=
82
+ end
83
+ self._bel_trans_targs = [
84
+ 1, 0, 2, 3, 4, 3, 4
85
+ ]
86
+
87
+ class << self
88
+ attr_accessor :_bel_trans_actions
89
+ private :_bel_trans_actions, :_bel_trans_actions=
90
+ end
91
+ self._bel_trans_actions = [
92
+ 0, 0, 0, 1, 2, 3, 4
93
+ ]
94
+
95
+ class << self
96
+ attr_accessor :bel_start
97
+ end
98
+ self.bel_start = 1;
99
+ class << self
100
+ attr_accessor :bel_first_final
101
+ end
102
+ self.bel_first_final = 4;
103
+ class << self
104
+ attr_accessor :bel_error
105
+ end
106
+ self.bel_error = 0;
107
+
108
+ class << self
109
+ attr_accessor :bel_en_comment_line
110
+ end
111
+ self.bel_en_comment_line = 1;
112
+
113
+
114
+ # end: ragel
115
+ end
116
+
117
+ def each
118
+ @buffers = {}
119
+ data = @content.unpack('C*')
120
+ p = 0
121
+ pe = data.length
122
+
123
+ # begin: ragel
124
+
125
+ begin
126
+ p ||= 0
127
+ pe ||= data.length
128
+ cs = bel_start
129
+ end
130
+
131
+
132
+ begin
133
+ testEof = false
134
+ _slen, _trans, _keys, _inds, _acts, _nacts = nil
135
+ _goto_level = 0
136
+ _resume = 10
137
+ _eof_trans = 15
138
+ _again = 20
139
+ _test_eof = 30
140
+ _out = 40
141
+ while true
142
+ if _goto_level <= 0
143
+ if p == pe
144
+ _goto_level = _test_eof
145
+ next
146
+ end
147
+ if cs == 0
148
+ _goto_level = _out
149
+ next
150
+ end
151
+ end
152
+ if _goto_level <= _resume
153
+ _keys = cs << 1
154
+ _inds = _bel_index_offsets[cs]
155
+ _slen = _bel_key_spans[cs]
156
+ _wide = data[p].ord
157
+ _trans = if ( _slen > 0 &&
158
+ _bel_trans_keys[_keys] <= _wide &&
159
+ _wide <= _bel_trans_keys[_keys + 1]
160
+ ) then
161
+ _bel_indicies[ _inds + _wide - _bel_trans_keys[_keys] ]
162
+ else
163
+ _bel_indicies[ _inds + _slen ]
164
+ end
165
+ cs = _bel_trans_targs[_trans]
166
+ if _bel_trans_actions[_trans] != 0
167
+ case _bel_trans_actions[_trans]
168
+ when 3 then
169
+ begin
170
+
171
+ @buffers[:comment_line] << data[p].ord
172
+ end
173
+ when 1 then
174
+ begin
175
+
176
+ @buffers[:comment_line] = []
177
+ end
178
+ begin
179
+
180
+ @buffers[:comment_line] << data[p].ord
181
+ end
182
+ when 4 then
183
+ begin
184
+
185
+ @buffers[:comment_line] = comment_line(
186
+ utf8_string(@buffers[:comment_line]))
187
+ end
188
+ begin
189
+
190
+ yield @buffers[:comment_line]
191
+ end
192
+ when 2 then
193
+ begin
194
+
195
+ @buffers[:comment_line] = []
196
+ end
197
+ begin
198
+
199
+ @buffers[:comment_line] = comment_line(
200
+ utf8_string(@buffers[:comment_line]))
201
+ end
202
+ begin
203
+
204
+ yield @buffers[:comment_line]
205
+ end
206
+ end
207
+ end
208
+ end
209
+ if _goto_level <= _again
210
+ if cs == 0
211
+ _goto_level = _out
212
+ next
213
+ end
214
+ p += 1
215
+ if p != pe
216
+ _goto_level = _resume
217
+ next
218
+ end
219
+ end
220
+ if _goto_level <= _test_eof
221
+ end
222
+ if _goto_level <= _out
223
+ break
224
+ end
225
+ end
226
+ end
227
+
228
+ # end: ragel
229
+ end
230
+ end
231
+ end
232
+ end
233
+ end
234
+ end
235
+
236
+ if __FILE__ == $0
237
+ $stdin.each_line do |line|
238
+ BELParser::Parsers::Common::CommentLine.parse(line) { |obj|
239
+ puts obj.inspect
240
+ }
241
+ end
242
+ end
243
+
244
+ # vim: ft=ruby ts=2 sw=2:
245
+ # encoding: utf-8