arvados-cli 0.1.20160913014253 → 0.1.20160913140509
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +4 -4
- data/bin/crunch-job +7 -1
- metadata +2 -2
checksums.yaml
CHANGED
@@ -1,7 +1,7 @@
|
|
1
1
|
---
|
2
2
|
SHA1:
|
3
|
-
metadata.gz:
|
4
|
-
data.tar.gz:
|
3
|
+
metadata.gz: a24b2c033368b863bb0111748911fc5410c7723a
|
4
|
+
data.tar.gz: 0fd51adb8f1580d87269d7a2b81dbd515ea7c7ab
|
5
5
|
SHA512:
|
6
|
-
metadata.gz:
|
7
|
-
data.tar.gz:
|
6
|
+
metadata.gz: c12b7427875a2f3ec99cf4e2758c5b12d424fd4a53c776a2fbf49e5f94e01d895836940d5a34a5539bb05d7bb4064f7480efdf2d548897294c87ef7e9722f7d8
|
7
|
+
data.tar.gz: 67667c14d08e153ae70f300f1384fc3716e9a7d9f70d626b4fd6079f525e94d4a1ed5d36d28d3d5c87a5abefbe5805441bbdbb4fdeeba184988f7b4b9fb66607
|
data/bin/crunch-job
CHANGED
@@ -1510,8 +1510,14 @@ sub preprocess_stderr
|
|
1510
1510
|
substr $jobstep[$jobstepidx]->{stderr}, 0, 1+length($line), "";
|
1511
1511
|
Log ($jobstepidx, "stderr $line");
|
1512
1512
|
if ($line =~ /srun: error: (SLURM job $ENV{SLURM_JOB_ID} has expired|Unable to confirm allocation for job $ENV{SLURM_JOB_ID})/) {
|
1513
|
-
#
|
1513
|
+
# If the allocation is revoked, we can't possibly continue, so mark all
|
1514
|
+
# nodes as failed. This will cause the overall exit code to be
|
1515
|
+
# EX_RETRY_UNLOCKED instead of failure so that crunch_dispatch can re-run
|
1516
|
+
# this job.
|
1514
1517
|
$main::please_freeze = 1;
|
1518
|
+
foreach my $st (@slot) {
|
1519
|
+
$st->{node}->{fail_count}++;
|
1520
|
+
}
|
1515
1521
|
}
|
1516
1522
|
elsif ($line =~ /srun: error: (Node failure on|Aborting, .*\bio error\b)/) {
|
1517
1523
|
$jobstep[$jobstepidx]->{tempfail} = 1;
|
metadata
CHANGED
@@ -1,7 +1,7 @@
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
2
2
|
name: arvados-cli
|
3
3
|
version: !ruby/object:Gem::Version
|
4
|
-
version: 0.1.
|
4
|
+
version: 0.1.20160913140509
|
5
5
|
platform: ruby
|
6
6
|
authors:
|
7
7
|
- Arvados Authors
|
@@ -164,7 +164,7 @@ dependencies:
|
|
164
164
|
- - "~>"
|
165
165
|
- !ruby/object:Gem::Version
|
166
166
|
version: '0.8'
|
167
|
-
description: Arvados command line tools, git commit
|
167
|
+
description: Arvados command line tools, git commit 50b696969d71739e9fd083664de6a81db7e211b3
|
168
168
|
email: gem-dev@curoverse.com
|
169
169
|
executables:
|
170
170
|
- arv
|