arvados-cli 0.1.20160913014253 → 0.1.20160913140509
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- checksums.yaml +4 -4
- data/bin/crunch-job +7 -1
- metadata +2 -2
checksums.yaml
CHANGED
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@@ -1,7 +1,7 @@
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|
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1
1
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---
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2
2
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SHA1:
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|
3
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-
metadata.gz:
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|
4
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-
data.tar.gz:
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|
3
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+
metadata.gz: a24b2c033368b863bb0111748911fc5410c7723a
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|
4
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+
data.tar.gz: 0fd51adb8f1580d87269d7a2b81dbd515ea7c7ab
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5
5
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SHA512:
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|
6
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-
metadata.gz:
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|
7
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-
data.tar.gz:
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6
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+
metadata.gz: c12b7427875a2f3ec99cf4e2758c5b12d424fd4a53c776a2fbf49e5f94e01d895836940d5a34a5539bb05d7bb4064f7480efdf2d548897294c87ef7e9722f7d8
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|
7
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+
data.tar.gz: 67667c14d08e153ae70f300f1384fc3716e9a7d9f70d626b4fd6079f525e94d4a1ed5d36d28d3d5c87a5abefbe5805441bbdbb4fdeeba184988f7b4b9fb66607
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data/bin/crunch-job
CHANGED
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@@ -1510,8 +1510,14 @@ sub preprocess_stderr
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|
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1510
1510
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substr $jobstep[$jobstepidx]->{stderr}, 0, 1+length($line), "";
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1511
1511
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Log ($jobstepidx, "stderr $line");
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1512
1512
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if ($line =~ /srun: error: (SLURM job $ENV{SLURM_JOB_ID} has expired|Unable to confirm allocation for job $ENV{SLURM_JOB_ID})/) {
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1513
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-
#
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1513
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+
# If the allocation is revoked, we can't possibly continue, so mark all
|
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1514
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+
# nodes as failed. This will cause the overall exit code to be
|
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1515
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+
# EX_RETRY_UNLOCKED instead of failure so that crunch_dispatch can re-run
|
|
1516
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+
# this job.
|
|
1514
1517
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$main::please_freeze = 1;
|
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1518
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+
foreach my $st (@slot) {
|
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1519
|
+
$st->{node}->{fail_count}++;
|
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1520
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+
}
|
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1515
1521
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}
|
|
1516
1522
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elsif ($line =~ /srun: error: (Node failure on|Aborting, .*\bio error\b)/) {
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1517
1523
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$jobstep[$jobstepidx]->{tempfail} = 1;
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metadata
CHANGED
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@@ -1,7 +1,7 @@
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|
|
1
1
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--- !ruby/object:Gem::Specification
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|
2
2
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name: arvados-cli
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|
3
3
|
version: !ruby/object:Gem::Version
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|
4
|
-
version: 0.1.
|
|
4
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+
version: 0.1.20160913140509
|
|
5
5
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platform: ruby
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|
6
6
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authors:
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|
7
7
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- Arvados Authors
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@@ -164,7 +164,7 @@ dependencies:
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|
|
164
164
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- - "~>"
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|
165
165
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- !ruby/object:Gem::Version
|
|
166
166
|
version: '0.8'
|
|
167
|
-
description: Arvados command line tools, git commit
|
|
167
|
+
description: Arvados command line tools, git commit 50b696969d71739e9fd083664de6a81db7e211b3
|
|
168
168
|
email: gem-dev@curoverse.com
|
|
169
169
|
executables:
|
|
170
170
|
- arv
|