algorithms64 0.6.2

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Files changed (54) hide show
  1. checksums.yaml +7 -0
  2. data/CHANGELOG.markdown +193 -0
  3. data/Gemfile +9 -0
  4. data/Manifest +51 -0
  5. data/README.markdown +66 -0
  6. data/Rakefile +22 -0
  7. data/algorithms.gemspec +23 -0
  8. data/benchmarks/deque.rb +17 -0
  9. data/benchmarks/sorts.rb +34 -0
  10. data/benchmarks/treemaps.rb +51 -0
  11. data/ext/algorithms/string/extconf.rb +4 -0
  12. data/ext/algorithms/string/string.c +68 -0
  13. data/ext/containers/bst/bst.c +247 -0
  14. data/ext/containers/bst/extconf.rb +4 -0
  15. data/ext/containers/deque/deque.c +247 -0
  16. data/ext/containers/deque/extconf.rb +4 -0
  17. data/ext/containers/rbtree_map/extconf.rb +4 -0
  18. data/ext/containers/rbtree_map/rbtree.c +498 -0
  19. data/ext/containers/splaytree_map/extconf.rb +4 -0
  20. data/ext/containers/splaytree_map/splaytree.c +419 -0
  21. data/lib/algorithms.rb +66 -0
  22. data/lib/algorithms/search.rb +84 -0
  23. data/lib/algorithms/sort.rb +368 -0
  24. data/lib/algorithms/string.rb +9 -0
  25. data/lib/containers/deque.rb +171 -0
  26. data/lib/containers/heap.rb +502 -0
  27. data/lib/containers/kd_tree.rb +110 -0
  28. data/lib/containers/priority_queue.rb +113 -0
  29. data/lib/containers/queue.rb +68 -0
  30. data/lib/containers/rb_tree_map.rb +398 -0
  31. data/lib/containers/splay_tree_map.rb +269 -0
  32. data/lib/containers/stack.rb +67 -0
  33. data/lib/containers/suffix_array.rb +68 -0
  34. data/lib/containers/trie.rb +182 -0
  35. data/spec/bst_gc_mark_spec.rb +25 -0
  36. data/spec/bst_spec.rb +25 -0
  37. data/spec/deque_gc_mark_spec.rb +18 -0
  38. data/spec/deque_spec.rb +108 -0
  39. data/spec/heap_spec.rb +131 -0
  40. data/spec/kd_expected_out.txt +10000 -0
  41. data/spec/kd_test_in.txt +10000 -0
  42. data/spec/kd_tree_spec.rb +34 -0
  43. data/spec/map_gc_mark_spec.rb +29 -0
  44. data/spec/priority_queue_spec.rb +75 -0
  45. data/spec/queue_spec.rb +61 -0
  46. data/spec/rb_tree_map_spec.rb +123 -0
  47. data/spec/search_spec.rb +28 -0
  48. data/spec/sort_spec.rb +29 -0
  49. data/spec/splay_tree_map_spec.rb +106 -0
  50. data/spec/stack_spec.rb +60 -0
  51. data/spec/string_spec.rb +15 -0
  52. data/spec/suffix_array_spec.rb +40 -0
  53. data/spec/trie_spec.rb +59 -0
  54. metadata +110 -0
@@ -0,0 +1,9 @@
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+ =begin rdoc
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+ This module implements string algorithms. Documentation is provided for each algorithm.
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+
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+ =end
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+
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+ begin
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+ require 'CString'
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+ rescue LoadError
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+ end
@@ -0,0 +1,171 @@
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+ =begin rdoc
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+ A Deque is a container that allows items to be added and removed from both the front and back,
3
+ acting as a combination of a Stack and Queue.
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+
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+ This implementation uses a doubly-linked list, guaranteeing O(1) complexity for all operations.
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+ =end
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+ class Containers::RubyDeque
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+ include Enumerable
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+
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+ Node = Struct.new(:left, :right, :obj)
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+
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+ # Create a new Deque. Takes an optional array argument to initialize the Deque.
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+ #
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+ # d = Containers::Deque.new([1, 2, 3])
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+ # d.front #=> 1
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+ # d.back #=> 3
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+ def initialize(ary=[])
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+ @front = nil
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+ @back = nil
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+ @size = 0
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+ ary.to_a.each { |obj| push_back(obj) }
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+ end
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+
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+ # Returns true if the Deque is empty, false otherwise.
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+ def empty?
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+ @size == 0
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+ end
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+
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+ # Removes all the objects in the Deque.
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+ def clear
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+ @front = @back = nil
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+ @size = 0
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+ end
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+
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+ # Return the number of items in the Deque.
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+ #
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+ # d = Containers::Deque.new([1, 2, 3])
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+ # d.size #=> 3
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+ def size
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+ @size
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+ end
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+ alias_method :length, :size
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+
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+ # Returns the object at the front of the Deque but does not remove it.
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+ #
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+ # d = Containers::Deque.new
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+ # d.push_front(1)
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+ # d.push_front(2)
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+ # d.front #=> 2
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+ def front
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+ @front && @front.obj
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+ end
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+
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+ # Returns the object at the back of the Deque but does not remove it.
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+ #
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+ # d = Containers::Deque.new
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+ # d.push_front(1)
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+ # d.push_front(2)
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+ # d.back #=> 1
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+ def back
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+ @back && @back.obj
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+ end
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+
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+ # Adds an object at the front of the Deque.
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+ #
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+ # d = Containers::Deque.new([1, 2, 3])
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+ # d.push_front(0)
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+ # d.pop_front #=> 0
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+ def push_front(obj)
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+ node = Node.new(nil, nil, obj)
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+ if @front
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+ node.right = @front
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+ @front.left = node
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+ @front = node
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+ else
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+ @front = @back = node
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+ end
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+ @size += 1
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+ obj
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+ end
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+
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+ # Adds an object at the back of the Deque.
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+ #
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+ # d = Containers::Deque.new([1, 2, 3])
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+ # d.push_back(4)
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+ # d.pop_back #=> 4
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+ def push_back(obj)
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+ node = Node.new(nil, nil, obj)
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+ if @back
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+ node.left = @back
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+ @back.right = node
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+ @back = node
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+ else
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+ @front = @back = node
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+ end
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+ @size += 1
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+ obj
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+ end
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+
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+ # Returns the object at the front of the Deque and removes it.
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+ #
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+ # d = Containers::Deque.new
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+ # d.push_front(1)
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+ # d.push_front(2)
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+ # d.pop_front #=> 2
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+ # d.size #=> 1
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+ def pop_front
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+ return nil unless @front
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+ node = @front
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+ if @size == 1
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+ clear
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+ return node.obj
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+ else
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+ @front.right.left = nil
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+ @front = @front.right
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+ end
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+ @size -= 1
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+ node.obj
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+ end
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+
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+ # Returns the object at the back of the Deque and removes it.
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+ #
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+ # d = Containers::Deque.new
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+ # d.push_front(1)
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+ # d.push_front(2)
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+ # d.pop_back #=> 1
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+ # d.size #=> 1
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+ def pop_back
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+ return nil unless @back
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+ node = @back
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+ if @size == 1
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+ clear
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+ return node.obj
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+ else
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+ @back.left.right = nil
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+ @back = @back.left
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+ end
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+ @size -= 1
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+ node.obj
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+ end
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+
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+ # Iterate over the Deque in FIFO order.
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+ def each_forward
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+ return unless @front
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+ node = @front
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+ while node
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+ yield node.obj
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+ node = node.right
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+ end
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+ end
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+ alias_method :each, :each_forward
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+
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+ # Iterate over the Deque in LIFO order.
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+ def each_backward
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+ return unless @back
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+ node = @back
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+ while node
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+ yield node.obj
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+ node = node.left
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+ end
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+ end
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+ alias_method :reverse_each, :each_backward
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+
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+ end
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+
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+ begin
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+ require 'CDeque'
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+ Containers::Deque = Containers::CDeque
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+ rescue LoadError # C Version could not be found, try ruby version
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+ Containers::Deque = Containers::RubyDeque
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+ end
@@ -0,0 +1,502 @@
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+ =begin rdoc
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+ A Heap is a container that satisfies the heap property that nodes are always smaller in
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+ value than their parent node.
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+
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+ The Containers::Heap class is flexible and upon initialization, takes an optional block
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+ that determines how the items are ordered. Two versions that are included are the
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+ Containers::MaxHeap and Containers::MinHeap that return the largest and smallest items on
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+ each invocation, respectively.
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+
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+ This library implements a Fibonacci heap, which allows O(1) complexity for most methods.
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+ =end
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+ class Containers::Heap
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+ include Enumerable
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+
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+ # call-seq:
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+ # size -> int
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+ #
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+ # Return the number of elements in the heap.
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+ def size
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+ @size
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+ end
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+ alias_method :length, :size
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+
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+ # call-seq:
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+ # Heap.new(optional_array) { |x, y| optional_comparison_fn } -> new_heap
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+ #
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+ # If an optional array is passed, the entries in the array are inserted into the heap with
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+ # equal key and value fields. Also, an optional block can be passed to define the function
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+ # that maintains heap property. For example, a min-heap can be created with:
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+ #
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+ # minheap = Heap.new { |x, y| (x <=> y) == -1 }
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+ # minheap.push(6)
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+ # minheap.push(10)
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+ # minheap.pop #=> 6
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+ #
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+ # Thus, smaller elements will be parent nodes. The heap defaults to a min-heap if no block
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+ # is given.
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+ def initialize(ary=[], &block)
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+ @compare_fn = block || lambda { |x, y| (x <=> y) == -1 }
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+ @next = nil
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+ @size = 0
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+ @stored = {}
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+
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+ ary.each { |n| push(n) } unless ary.empty?
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+ end
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+
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+ # call-seq:
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+ # push(key, value) -> value
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+ # push(value) -> value
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+ #
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+ # Inserts an item with a given key into the heap. If only one parameter is given,
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+ # the key is set to the value.
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+ #
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+ # Complexity: O(1)
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+ #
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+ # heap = MinHeap.new
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+ # heap.push(1, "Cat")
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+ # heap.push(2)
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+ # heap.pop #=> "Cat"
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+ # heap.pop #=> 2
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+ def push(key, value=key)
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+ raise ArgumentError, "Heap keys must not be nil." unless key
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+ node = Node.new(key, value)
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+ # Add new node to the left of the @next node
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+ if @next
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+ node.right = @next
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+ node.left = @next.left
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+ node.left.right = node
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+ @next.left = node
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+ if @compare_fn[key, @next.key]
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+ @next = node
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+ end
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+ else
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+ @next = node
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+ end
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+ @size += 1
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+
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+ arr = []
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+ w = @next.right
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+ until w == @next do
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+ arr << w.value
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+ w = w.right
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+ end
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+ arr << @next.value
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+ @stored[key] ||= []
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+ @stored[key] << node
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+ value
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+ end
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+ alias_method :<<, :push
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+
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+ # call-seq:
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+ # has_key?(key) -> true or false
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+ #
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+ # Returns true if heap contains the key.
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+ #
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+ # Complexity: O(1)
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+ #
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+ # minheap = MinHeap.new([1, 2])
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+ # minheap.has_key?(2) #=> true
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+ # minheap.has_key?(4) #=> false
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+ def has_key?(key)
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+ @stored[key] && !@stored[key].empty? ? true : false
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+ end
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+
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+ # call-seq:
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+ # next -> value
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+ # next -> nil
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+ #
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+ # Returns the value of the next item in heap order, but does not remove it.
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+ #
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+ # Complexity: O(1)
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+ #
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+ # minheap = MinHeap.new([1, 2])
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+ # minheap.next #=> 1
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+ # minheap.size #=> 2
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+ def next
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+ @next && @next.value
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+ end
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+
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+ # call-seq:
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+ # next_key -> key
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+ # next_key -> nil
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+ #
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+ # Returns the key associated with the next item in heap order, but does not remove the value.
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+ #
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+ # Complexity: O(1)
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+ #
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+ # minheap = MinHeap.new
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+ # minheap.push(1, :a)
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+ # minheap.next_key #=> 1
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+ #
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+ def next_key
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+ @next && @next.key
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+ end
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+
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+ # call-seq:
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+ # clear -> nil
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+ #
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+ # Removes all elements from the heap, destructively.
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+ #
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+ # Complexity: O(1)
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+ #
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+ def clear
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+ @next = nil
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+ @size = 0
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+ @stored = {}
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+ nil
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+ end
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+
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+ # call-seq:
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+ # empty? -> true or false
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+ #
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+ # Returns true if the heap is empty, false otherwise.
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+ def empty?
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+ @next.nil?
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+ end
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+
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+ # call-seq:
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+ # merge!(otherheap) -> merged_heap
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+ #
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+ # Does a shallow merge of all the nodes in the other heap.
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+ #
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+ # Complexity: O(1)
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+ #
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+ # heap = MinHeap.new([5, 6, 7, 8])
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+ # otherheap = MinHeap.new([1, 2, 3, 4])
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+ # heap.merge!(otherheap)
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+ # heap.size #=> 8
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+ # heap.pop #=> 1
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+ def merge!(otherheap)
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+ raise ArgumentError, "Trying to merge a heap with something not a heap" unless otherheap.kind_of? Containers::Heap
172
+ other_root = otherheap.instance_variable_get("@next")
173
+ if other_root
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+ @stored = @stored.merge(otherheap.instance_variable_get("@stored")) { |key, a, b| (a << b).flatten }
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+ # Insert othernode's @next node to the left of current @next
176
+ @next.left.right = other_root
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+ ol = other_root.left
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+ other_root.left = @next.left
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+ ol.right = @next
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+ @next.left = ol
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+
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+ @next = other_root if @compare_fn[other_root.key, @next.key]
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+ end
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+ @size += otherheap.size
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+ end
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+
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+ # call-seq:
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+ # pop -> value
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+ # pop -> nil
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+ #
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+ # Returns the value of the next item in heap order and removes it from the heap.
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+ #
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+ # Complexity: O(1)
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+ #
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+ # minheap = MinHeap.new([1, 2])
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+ # minheap.pop #=> 1
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+ # minheap.size #=> 1
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+ def pop
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+ return nil unless @next
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+ popped = @next
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+ if @size == 1
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+ clear
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+ return popped.value
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+ end
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+ # Merge the popped's children into root node
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+ if @next.child
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+ @next.child.parent = nil
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+
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+ # get rid of parent
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+ sibling = @next.child.right
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+ until sibling == @next.child
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+ sibling.parent = nil
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+ sibling = sibling.right
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+ end
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+
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+ # Merge the children into the root. If @next is the only root node, make its child the @next node
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+ if @next.right == @next
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+ @next = @next.child
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+ else
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+ next_left, next_right = @next.left, @next.right
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+ current_child = @next.child
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+ @next.right.left = current_child
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+ @next.left.right = current_child.right
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+ current_child.right.left = next_left
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+ current_child.right = next_right
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+ @next = @next.right
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+ end
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+ else
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+ @next.left.right = @next.right
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+ @next.right.left = @next.left
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+ @next = @next.right
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+ end
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+ consolidate
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+
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+ unless @stored[popped.key].delete(popped)
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+ raise "Couldn't delete node from stored nodes hash"
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+ end
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+ @size -= 1
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+
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+ popped.value
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+ end
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+ alias_method :next!, :pop
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+
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+ # call-seq:
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+ # change_key(key, new_key) -> [new_key, value]
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+ # change_key(key, new_key) -> nil
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+ #
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+ # Changes the key from one to another. Doing so must not violate the heap property or
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+ # an exception will be raised. If the key is found, an array containing the new key and
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+ # value pair is returned, otherwise nil is returned.
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+ #
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+ # In the case of duplicate keys, an arbitrary key is changed. This will be investigated
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+ # more in the future.
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+ #
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+ # Complexity: amortized O(1)
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+ #
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+ # minheap = MinHeap.new([1, 2])
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+ # minheap.change_key(2, 3) #=> raise error since we can't increase the value in a min-heap
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+ # minheap.change_key(2, 0) #=> [0, 2]
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+ # minheap.pop #=> 2
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+ # minheap.pop #=> 1
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+ def change_key(key, new_key, delete=false)
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+ return if @stored[key].nil? || @stored[key].empty? || (key == new_key)
264
+
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+ # Must maintain heap property
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+ raise "Changing this key would not maintain heap property!" unless (delete || @compare_fn[new_key, key])
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+ node = @stored[key].shift
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+ if node
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+ node.key = new_key
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+ @stored[new_key] ||= []
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+ @stored[new_key] << node
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+ parent = node.parent
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+ if parent
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+ # if heap property is violated
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+ if delete || @compare_fn[new_key, parent.key]
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+ cut(node, parent)
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+ cascading_cut(parent)
278
+ end
279
+ end
280
+ if delete || @compare_fn[node.key, @next.key]
281
+ @next = node
282
+ end
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+ return [node.key, node.value]
284
+ end
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+ nil
286
+ end
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+
288
+ # call-seq:
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+ # delete(key) -> value
290
+ # delete(key) -> nil
291
+ #
292
+ # Deletes the item with associated key and returns it. nil is returned if the key
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+ # is not found. In the case of nodes with duplicate keys, an arbitrary one is deleted.
294
+ #
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+ # Complexity: amortized O(log n)
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+ #
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+ # minheap = MinHeap.new([1, 2])
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+ # minheap.delete(1) #=> 1
299
+ # minheap.size #=> 1
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+ def delete(key)
301
+ pop if change_key(key, nil, true)
302
+ end
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+
304
+ # Node class used internally
305
+ class Node # :nodoc:
306
+ attr_accessor :parent, :child, :left, :right, :key, :value, :degree, :marked
307
+
308
+ def initialize(key, value)
309
+ @key = key
310
+ @value = value
311
+ @degree = 0
312
+ @marked = false
313
+ @right = self
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+ @left = self
315
+ end
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+
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+ def marked?
318
+ @marked == true
319
+ end
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+
321
+ end
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+
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+ # make node a child of a parent node
324
+ def link_nodes(child, parent)
325
+ # link the child's siblings
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+ child.left.right = child.right
327
+ child.right.left = child.left
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+
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+ child.parent = parent
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+
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+ # if parent doesn't have children, make new child its only child
332
+ if parent.child.nil?
333
+ parent.child = child.right = child.left = child
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+ else # otherwise insert new child into parent's children list
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+ current_child = parent.child
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+ child.left = current_child
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+ child.right = current_child.right
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+ current_child.right.left = child
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+ current_child.right = child
340
+ end
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+ parent.degree += 1
342
+ child.marked = false
343
+ end
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+ private :link_nodes
345
+
346
+ # Makes sure the structure does not contain nodes in the root list with equal degrees
347
+ def consolidate
348
+ roots = []
349
+ root = @next
350
+ min = root
351
+ # find the nodes in the list
352
+ loop do
353
+ roots << root
354
+ root = root.right
355
+ break if root == @next
356
+ end
357
+ degrees = []
358
+ roots.each do |root|
359
+ min = root if @compare_fn[root.key, min.key]
360
+ # check if we need to merge
361
+ if degrees[root.degree].nil? # no other node with the same degree
362
+ degrees[root.degree] = root
363
+ next
364
+ else # there is another node with the same degree, consolidate them
365
+ degree = root.degree
366
+ until degrees[degree].nil? do
367
+ other_root_with_degree = degrees[degree]
368
+ if @compare_fn[root.key, other_root_with_degree.key] # determine which node is the parent, which one is the child
369
+ smaller, larger = root, other_root_with_degree
370
+ else
371
+ smaller, larger = other_root_with_degree, root
372
+ end
373
+ link_nodes(larger, smaller)
374
+ degrees[degree] = nil
375
+ root = smaller
376
+ degree += 1
377
+ end
378
+ degrees[degree] = root
379
+ min = root if min.key == root.key # this fixes a bug with duplicate keys not being in the right order
380
+ end
381
+ end
382
+ @next = min
383
+ end
384
+ private :consolidate
385
+
386
+ def cascading_cut(node)
387
+ p = node.parent
388
+ if p
389
+ if node.marked?
390
+ cut(node, p)
391
+ cascading_cut(p)
392
+ else
393
+ node.marked = true
394
+ end
395
+ end
396
+ end
397
+ private :cascading_cut
398
+
399
+ # remove x from y's children and add x to the root list
400
+ def cut(x, y)
401
+ x.left.right = x.right
402
+ x.right.left = x.left
403
+ y.degree -= 1
404
+ if (y.degree == 0)
405
+ y.child = nil
406
+ elsif (y.child == x)
407
+ y.child = x.right
408
+ end
409
+ x.right = @next
410
+ x.left = @next.left
411
+ @next.left = x
412
+ x.left.right = x
413
+ x.parent = nil
414
+ x.marked = false
415
+ end
416
+ private :cut
417
+
418
+ end
419
+
420
+ # A MaxHeap is a heap where the items are returned in descending order of key value.
421
+ class Containers::MaxHeap < Containers::Heap
422
+
423
+ # call-seq:
424
+ # MaxHeap.new(ary) -> new_heap
425
+ #
426
+ # Creates a new MaxHeap with an optional array parameter of items to insert into the heap.
427
+ # A MaxHeap is created by calling Heap.new { |x, y| (x <=> y) == 1 }, so this is a convenience class.
428
+ #
429
+ # maxheap = MaxHeap.new([1, 2, 3, 4])
430
+ # maxheap.pop #=> 4
431
+ # maxheap.pop #=> 3
432
+ def initialize(ary=[])
433
+ super(ary) { |x, y| (x <=> y) == 1 }
434
+ end
435
+
436
+ # call-seq:
437
+ # max -> value
438
+ # max -> nil
439
+ #
440
+ # Returns the item with the largest key, but does not remove it from the heap.
441
+ #
442
+ # maxheap = MaxHeap.new([1, 2, 3, 4])
443
+ # maxheap.max #=> 4
444
+ def max
445
+ self.next
446
+ end
447
+
448
+ # call-seq:
449
+ # max! -> value
450
+ # max! -> nil
451
+ #
452
+ # Returns the item with the largest key and removes it from the heap.
453
+ #
454
+ # maxheap = MaxHeap.new([1, 2, 3, 4])
455
+ # maxheap.max! #=> 4
456
+ # maxheap.size #=> 3
457
+ def max!
458
+ self.pop
459
+ end
460
+ end
461
+
462
+ # A MinHeap is a heap where the items are returned in ascending order of key value.
463
+ class Containers::MinHeap < Containers::Heap
464
+
465
+ # call-seq:
466
+ # MinHeap.new(ary) -> new_heap
467
+ #
468
+ # Creates a new MinHeap with an optional array parameter of items to insert into the heap.
469
+ # A MinHeap is created by calling Heap.new { |x, y| (x <=> y) == -1 }, so this is a convenience class.
470
+ #
471
+ # minheap = MinHeap.new([1, 2, 3, 4])
472
+ # minheap.pop #=> 1
473
+ # minheap.pop #=> 2
474
+ def initialize(ary=[])
475
+ super(ary) { |x, y| (x <=> y) == -1 }
476
+ end
477
+
478
+ # call-seq:
479
+ # min -> value
480
+ # min -> nil
481
+ #
482
+ # Returns the item with the smallest key, but does not remove it from the heap.
483
+ #
484
+ # minheap = MinHeap.new([1, 2, 3, 4])
485
+ # minheap.min #=> 1
486
+ def min
487
+ self.next
488
+ end
489
+
490
+ # call-seq:
491
+ # min! -> value
492
+ # min! -> nil
493
+ #
494
+ # Returns the item with the smallest key and removes it from the heap.
495
+ #
496
+ # minheap = MinHeap.new([1, 2, 3, 4])
497
+ # minheap.min! #=> 1
498
+ # minheap.size #=> 3
499
+ def min!
500
+ self.pop
501
+ end
502
+ end