xtgeo 4.10.0__cp313-cp313-macosx_11_0_arm64.whl → 4.11.0__cp313-cp313-macosx_11_0_arm64.whl

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  1. xtgeo/_cxtgeo.cpython-313-darwin.so +0 -0
  2. xtgeo/_internal.cpython-313-darwin.so +0 -0
  3. xtgeo/common/version.py +16 -3
  4. xtgeo/cube/_cube_window_attributes.py +13 -4
  5. xtgeo/grid3d/_grid_etc1.py +10 -5
  6. xtgeo/grid3d/grid.py +22 -6
  7. xtgeo/include/fmt/args.h +220 -0
  8. xtgeo/include/fmt/base.h +2989 -0
  9. xtgeo/include/fmt/chrono.h +2330 -0
  10. xtgeo/include/fmt/color.h +637 -0
  11. xtgeo/include/fmt/compile.h +539 -0
  12. xtgeo/include/fmt/core.h +5 -0
  13. xtgeo/include/fmt/format-inl.h +1948 -0
  14. xtgeo/include/fmt/format.h +4244 -0
  15. xtgeo/include/fmt/os.h +427 -0
  16. xtgeo/include/fmt/ostream.h +167 -0
  17. xtgeo/include/fmt/printf.h +633 -0
  18. xtgeo/include/fmt/ranges.h +850 -0
  19. xtgeo/include/fmt/std.h +728 -0
  20. xtgeo/include/fmt/xchar.h +369 -0
  21. xtgeo/lib/cmake/fmt/fmt-config-version.cmake +43 -0
  22. xtgeo/lib/cmake/fmt/fmt-config.cmake +31 -0
  23. xtgeo/lib/cmake/fmt/fmt-targets-release.cmake +19 -0
  24. xtgeo/{share/eigen3/cmake/Eigen3Targets.cmake → lib/cmake/fmt/fmt-targets.cmake} +16 -6
  25. xtgeo/lib/libfmt.a +0 -0
  26. xtgeo/lib/pkgconfig/fmt.pc +11 -0
  27. xtgeo/metadata/metadata.py +20 -13
  28. {xtgeo-4.10.0.dist-info → xtgeo-4.11.0.dist-info}/METADATA +1 -1
  29. xtgeo-4.11.0.dist-info/RECORD +137 -0
  30. {xtgeo-4.10.0.dist-info → xtgeo-4.11.0.dist-info}/WHEEL +1 -1
  31. xtgeo/include/eigen3/Eigen/Cholesky +0 -45
  32. xtgeo/include/eigen3/Eigen/CholmodSupport +0 -48
  33. xtgeo/include/eigen3/Eigen/Core +0 -384
  34. xtgeo/include/eigen3/Eigen/Dense +0 -7
  35. xtgeo/include/eigen3/Eigen/Eigen +0 -2
  36. xtgeo/include/eigen3/Eigen/Eigenvalues +0 -60
  37. xtgeo/include/eigen3/Eigen/Geometry +0 -59
  38. xtgeo/include/eigen3/Eigen/Householder +0 -29
  39. xtgeo/include/eigen3/Eigen/IterativeLinearSolvers +0 -48
  40. xtgeo/include/eigen3/Eigen/Jacobi +0 -32
  41. xtgeo/include/eigen3/Eigen/KLUSupport +0 -41
  42. xtgeo/include/eigen3/Eigen/LU +0 -47
  43. xtgeo/include/eigen3/Eigen/MetisSupport +0 -35
  44. xtgeo/include/eigen3/Eigen/OrderingMethods +0 -70
  45. xtgeo/include/eigen3/Eigen/PaStiXSupport +0 -49
  46. xtgeo/include/eigen3/Eigen/PardisoSupport +0 -35
  47. xtgeo/include/eigen3/Eigen/QR +0 -50
  48. xtgeo/include/eigen3/Eigen/QtAlignedMalloc +0 -39
  49. xtgeo/include/eigen3/Eigen/SPQRSupport +0 -34
  50. xtgeo/include/eigen3/Eigen/SVD +0 -50
  51. xtgeo/include/eigen3/Eigen/Sparse +0 -34
  52. xtgeo/include/eigen3/Eigen/SparseCholesky +0 -37
  53. xtgeo/include/eigen3/Eigen/SparseCore +0 -69
  54. xtgeo/include/eigen3/Eigen/SparseLU +0 -50
  55. xtgeo/include/eigen3/Eigen/SparseQR +0 -36
  56. xtgeo/include/eigen3/Eigen/StdDeque +0 -27
  57. xtgeo/include/eigen3/Eigen/StdList +0 -26
  58. xtgeo/include/eigen3/Eigen/StdVector +0 -27
  59. xtgeo/include/eigen3/Eigen/SuperLUSupport +0 -64
  60. xtgeo/include/eigen3/Eigen/UmfPackSupport +0 -40
  61. xtgeo/include/eigen3/Eigen/src/Cholesky/LDLT.h +0 -688
  62. xtgeo/include/eigen3/Eigen/src/Cholesky/LLT.h +0 -558
  63. xtgeo/include/eigen3/Eigen/src/Cholesky/LLT_LAPACKE.h +0 -99
  64. xtgeo/include/eigen3/Eigen/src/CholmodSupport/CholmodSupport.h +0 -682
  65. xtgeo/include/eigen3/Eigen/src/Core/ArithmeticSequence.h +0 -413
  66. xtgeo/include/eigen3/Eigen/src/Core/Array.h +0 -417
  67. xtgeo/include/eigen3/Eigen/src/Core/ArrayBase.h +0 -226
  68. xtgeo/include/eigen3/Eigen/src/Core/ArrayWrapper.h +0 -209
  69. xtgeo/include/eigen3/Eigen/src/Core/Assign.h +0 -90
  70. xtgeo/include/eigen3/Eigen/src/Core/AssignEvaluator.h +0 -1010
  71. xtgeo/include/eigen3/Eigen/src/Core/Assign_MKL.h +0 -178
  72. xtgeo/include/eigen3/Eigen/src/Core/BandMatrix.h +0 -353
  73. xtgeo/include/eigen3/Eigen/src/Core/Block.h +0 -448
  74. xtgeo/include/eigen3/Eigen/src/Core/BooleanRedux.h +0 -162
  75. xtgeo/include/eigen3/Eigen/src/Core/CommaInitializer.h +0 -164
  76. xtgeo/include/eigen3/Eigen/src/Core/ConditionEstimator.h +0 -175
  77. xtgeo/include/eigen3/Eigen/src/Core/CoreEvaluators.h +0 -1741
  78. xtgeo/include/eigen3/Eigen/src/Core/CoreIterators.h +0 -132
  79. xtgeo/include/eigen3/Eigen/src/Core/CwiseBinaryOp.h +0 -183
  80. xtgeo/include/eigen3/Eigen/src/Core/CwiseNullaryOp.h +0 -1001
  81. xtgeo/include/eigen3/Eigen/src/Core/CwiseTernaryOp.h +0 -197
  82. xtgeo/include/eigen3/Eigen/src/Core/CwiseUnaryOp.h +0 -103
  83. xtgeo/include/eigen3/Eigen/src/Core/CwiseUnaryView.h +0 -132
  84. xtgeo/include/eigen3/Eigen/src/Core/DenseBase.h +0 -701
  85. xtgeo/include/eigen3/Eigen/src/Core/DenseCoeffsBase.h +0 -685
  86. xtgeo/include/eigen3/Eigen/src/Core/DenseStorage.h +0 -652
  87. xtgeo/include/eigen3/Eigen/src/Core/Diagonal.h +0 -258
  88. xtgeo/include/eigen3/Eigen/src/Core/DiagonalMatrix.h +0 -391
  89. xtgeo/include/eigen3/Eigen/src/Core/DiagonalProduct.h +0 -28
  90. xtgeo/include/eigen3/Eigen/src/Core/Dot.h +0 -318
  91. xtgeo/include/eigen3/Eigen/src/Core/EigenBase.h +0 -160
  92. xtgeo/include/eigen3/Eigen/src/Core/ForceAlignedAccess.h +0 -150
  93. xtgeo/include/eigen3/Eigen/src/Core/Fuzzy.h +0 -155
  94. xtgeo/include/eigen3/Eigen/src/Core/GeneralProduct.h +0 -465
  95. xtgeo/include/eigen3/Eigen/src/Core/GenericPacketMath.h +0 -1040
  96. xtgeo/include/eigen3/Eigen/src/Core/GlobalFunctions.h +0 -194
  97. xtgeo/include/eigen3/Eigen/src/Core/IO.h +0 -258
  98. xtgeo/include/eigen3/Eigen/src/Core/IndexedView.h +0 -237
  99. xtgeo/include/eigen3/Eigen/src/Core/Inverse.h +0 -117
  100. xtgeo/include/eigen3/Eigen/src/Core/Map.h +0 -171
  101. xtgeo/include/eigen3/Eigen/src/Core/MapBase.h +0 -310
  102. xtgeo/include/eigen3/Eigen/src/Core/MathFunctions.h +0 -2057
  103. xtgeo/include/eigen3/Eigen/src/Core/MathFunctionsImpl.h +0 -200
  104. xtgeo/include/eigen3/Eigen/src/Core/Matrix.h +0 -565
  105. xtgeo/include/eigen3/Eigen/src/Core/MatrixBase.h +0 -547
  106. xtgeo/include/eigen3/Eigen/src/Core/NestByValue.h +0 -85
  107. xtgeo/include/eigen3/Eigen/src/Core/NoAlias.h +0 -109
  108. xtgeo/include/eigen3/Eigen/src/Core/NumTraits.h +0 -335
  109. xtgeo/include/eigen3/Eigen/src/Core/PartialReduxEvaluator.h +0 -232
  110. xtgeo/include/eigen3/Eigen/src/Core/PermutationMatrix.h +0 -605
  111. xtgeo/include/eigen3/Eigen/src/Core/PlainObjectBase.h +0 -1128
  112. xtgeo/include/eigen3/Eigen/src/Core/Product.h +0 -191
  113. xtgeo/include/eigen3/Eigen/src/Core/ProductEvaluators.h +0 -1179
  114. xtgeo/include/eigen3/Eigen/src/Core/Random.h +0 -218
  115. xtgeo/include/eigen3/Eigen/src/Core/Redux.h +0 -515
  116. xtgeo/include/eigen3/Eigen/src/Core/Ref.h +0 -381
  117. xtgeo/include/eigen3/Eigen/src/Core/Replicate.h +0 -142
  118. xtgeo/include/eigen3/Eigen/src/Core/Reshaped.h +0 -454
  119. xtgeo/include/eigen3/Eigen/src/Core/ReturnByValue.h +0 -119
  120. xtgeo/include/eigen3/Eigen/src/Core/Reverse.h +0 -217
  121. xtgeo/include/eigen3/Eigen/src/Core/Select.h +0 -164
  122. xtgeo/include/eigen3/Eigen/src/Core/SelfAdjointView.h +0 -365
  123. xtgeo/include/eigen3/Eigen/src/Core/SelfCwiseBinaryOp.h +0 -47
  124. xtgeo/include/eigen3/Eigen/src/Core/Solve.h +0 -188
  125. xtgeo/include/eigen3/Eigen/src/Core/SolveTriangular.h +0 -235
  126. xtgeo/include/eigen3/Eigen/src/Core/SolverBase.h +0 -168
  127. xtgeo/include/eigen3/Eigen/src/Core/StableNorm.h +0 -251
  128. xtgeo/include/eigen3/Eigen/src/Core/StlIterators.h +0 -463
  129. xtgeo/include/eigen3/Eigen/src/Core/Stride.h +0 -116
  130. xtgeo/include/eigen3/Eigen/src/Core/Swap.h +0 -68
  131. xtgeo/include/eigen3/Eigen/src/Core/Transpose.h +0 -464
  132. xtgeo/include/eigen3/Eigen/src/Core/Transpositions.h +0 -386
  133. xtgeo/include/eigen3/Eigen/src/Core/TriangularMatrix.h +0 -1001
  134. xtgeo/include/eigen3/Eigen/src/Core/VectorBlock.h +0 -96
  135. xtgeo/include/eigen3/Eigen/src/Core/VectorwiseOp.h +0 -784
  136. xtgeo/include/eigen3/Eigen/src/Core/Visitor.h +0 -381
  137. xtgeo/include/eigen3/Eigen/src/Core/arch/AVX/Complex.h +0 -372
  138. xtgeo/include/eigen3/Eigen/src/Core/arch/AVX/MathFunctions.h +0 -228
  139. xtgeo/include/eigen3/Eigen/src/Core/arch/AVX/PacketMath.h +0 -1574
  140. xtgeo/include/eigen3/Eigen/src/Core/arch/AVX/TypeCasting.h +0 -115
  141. xtgeo/include/eigen3/Eigen/src/Core/arch/AVX512/Complex.h +0 -422
  142. xtgeo/include/eigen3/Eigen/src/Core/arch/AVX512/MathFunctions.h +0 -362
  143. xtgeo/include/eigen3/Eigen/src/Core/arch/AVX512/PacketMath.h +0 -2303
  144. xtgeo/include/eigen3/Eigen/src/Core/arch/AVX512/TypeCasting.h +0 -89
  145. xtgeo/include/eigen3/Eigen/src/Core/arch/AltiVec/Complex.h +0 -417
  146. xtgeo/include/eigen3/Eigen/src/Core/arch/AltiVec/MathFunctions.h +0 -90
  147. xtgeo/include/eigen3/Eigen/src/Core/arch/AltiVec/MatrixProduct.h +0 -2937
  148. xtgeo/include/eigen3/Eigen/src/Core/arch/AltiVec/MatrixProductCommon.h +0 -221
  149. xtgeo/include/eigen3/Eigen/src/Core/arch/AltiVec/MatrixProductMMA.h +0 -629
  150. xtgeo/include/eigen3/Eigen/src/Core/arch/AltiVec/PacketMath.h +0 -2711
  151. xtgeo/include/eigen3/Eigen/src/Core/arch/CUDA/Complex.h +0 -258
  152. xtgeo/include/eigen3/Eigen/src/Core/arch/Default/BFloat16.h +0 -700
  153. xtgeo/include/eigen3/Eigen/src/Core/arch/Default/ConjHelper.h +0 -117
  154. xtgeo/include/eigen3/Eigen/src/Core/arch/Default/GenericPacketMathFunctions.h +0 -1649
  155. xtgeo/include/eigen3/Eigen/src/Core/arch/Default/GenericPacketMathFunctionsFwd.h +0 -110
  156. xtgeo/include/eigen3/Eigen/src/Core/arch/Default/Half.h +0 -942
  157. xtgeo/include/eigen3/Eigen/src/Core/arch/Default/Settings.h +0 -49
  158. xtgeo/include/eigen3/Eigen/src/Core/arch/Default/TypeCasting.h +0 -120
  159. xtgeo/include/eigen3/Eigen/src/Core/arch/GPU/MathFunctions.h +0 -103
  160. xtgeo/include/eigen3/Eigen/src/Core/arch/GPU/PacketMath.h +0 -1685
  161. xtgeo/include/eigen3/Eigen/src/Core/arch/GPU/TypeCasting.h +0 -80
  162. xtgeo/include/eigen3/Eigen/src/Core/arch/HIP/hcc/math_constants.h +0 -23
  163. xtgeo/include/eigen3/Eigen/src/Core/arch/MSA/Complex.h +0 -648
  164. xtgeo/include/eigen3/Eigen/src/Core/arch/MSA/MathFunctions.h +0 -387
  165. xtgeo/include/eigen3/Eigen/src/Core/arch/MSA/PacketMath.h +0 -1233
  166. xtgeo/include/eigen3/Eigen/src/Core/arch/NEON/Complex.h +0 -584
  167. xtgeo/include/eigen3/Eigen/src/Core/arch/NEON/GeneralBlockPanelKernel.h +0 -183
  168. xtgeo/include/eigen3/Eigen/src/Core/arch/NEON/MathFunctions.h +0 -75
  169. xtgeo/include/eigen3/Eigen/src/Core/arch/NEON/PacketMath.h +0 -4587
  170. xtgeo/include/eigen3/Eigen/src/Core/arch/NEON/TypeCasting.h +0 -1419
  171. xtgeo/include/eigen3/Eigen/src/Core/arch/SSE/Complex.h +0 -351
  172. xtgeo/include/eigen3/Eigen/src/Core/arch/SSE/MathFunctions.h +0 -199
  173. xtgeo/include/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h +0 -1505
  174. xtgeo/include/eigen3/Eigen/src/Core/arch/SSE/TypeCasting.h +0 -142
  175. xtgeo/include/eigen3/Eigen/src/Core/arch/SVE/MathFunctions.h +0 -44
  176. xtgeo/include/eigen3/Eigen/src/Core/arch/SVE/PacketMath.h +0 -752
  177. xtgeo/include/eigen3/Eigen/src/Core/arch/SVE/TypeCasting.h +0 -49
  178. xtgeo/include/eigen3/Eigen/src/Core/arch/SYCL/InteropHeaders.h +0 -232
  179. xtgeo/include/eigen3/Eigen/src/Core/arch/SYCL/MathFunctions.h +0 -301
  180. xtgeo/include/eigen3/Eigen/src/Core/arch/SYCL/PacketMath.h +0 -670
  181. xtgeo/include/eigen3/Eigen/src/Core/arch/SYCL/SyclMemoryModel.h +0 -694
  182. xtgeo/include/eigen3/Eigen/src/Core/arch/SYCL/TypeCasting.h +0 -85
  183. xtgeo/include/eigen3/Eigen/src/Core/arch/ZVector/Complex.h +0 -426
  184. xtgeo/include/eigen3/Eigen/src/Core/arch/ZVector/MathFunctions.h +0 -233
  185. xtgeo/include/eigen3/Eigen/src/Core/arch/ZVector/PacketMath.h +0 -1060
  186. xtgeo/include/eigen3/Eigen/src/Core/functors/AssignmentFunctors.h +0 -177
  187. xtgeo/include/eigen3/Eigen/src/Core/functors/BinaryFunctors.h +0 -541
  188. xtgeo/include/eigen3/Eigen/src/Core/functors/NullaryFunctors.h +0 -189
  189. xtgeo/include/eigen3/Eigen/src/Core/functors/StlFunctors.h +0 -166
  190. xtgeo/include/eigen3/Eigen/src/Core/functors/TernaryFunctors.h +0 -25
  191. xtgeo/include/eigen3/Eigen/src/Core/functors/UnaryFunctors.h +0 -1131
  192. xtgeo/include/eigen3/Eigen/src/Core/products/GeneralBlockPanelKernel.h +0 -2645
  193. xtgeo/include/eigen3/Eigen/src/Core/products/GeneralMatrixMatrix.h +0 -517
  194. xtgeo/include/eigen3/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h +0 -317
  195. xtgeo/include/eigen3/Eigen/src/Core/products/GeneralMatrixMatrixTriangular_BLAS.h +0 -145
  196. xtgeo/include/eigen3/Eigen/src/Core/products/GeneralMatrixMatrix_BLAS.h +0 -124
  197. xtgeo/include/eigen3/Eigen/src/Core/products/GeneralMatrixVector.h +0 -518
  198. xtgeo/include/eigen3/Eigen/src/Core/products/GeneralMatrixVector_BLAS.h +0 -136
  199. xtgeo/include/eigen3/Eigen/src/Core/products/Parallelizer.h +0 -180
  200. xtgeo/include/eigen3/Eigen/src/Core/products/SelfadjointMatrixMatrix.h +0 -544
  201. xtgeo/include/eigen3/Eigen/src/Core/products/SelfadjointMatrixMatrix_BLAS.h +0 -295
  202. xtgeo/include/eigen3/Eigen/src/Core/products/SelfadjointMatrixVector.h +0 -262
  203. xtgeo/include/eigen3/Eigen/src/Core/products/SelfadjointMatrixVector_BLAS.h +0 -118
  204. xtgeo/include/eigen3/Eigen/src/Core/products/SelfadjointProduct.h +0 -133
  205. xtgeo/include/eigen3/Eigen/src/Core/products/SelfadjointRank2Update.h +0 -94
  206. xtgeo/include/eigen3/Eigen/src/Core/products/TriangularMatrixMatrix.h +0 -472
  207. xtgeo/include/eigen3/Eigen/src/Core/products/TriangularMatrixMatrix_BLAS.h +0 -317
  208. xtgeo/include/eigen3/Eigen/src/Core/products/TriangularMatrixVector.h +0 -350
  209. xtgeo/include/eigen3/Eigen/src/Core/products/TriangularMatrixVector_BLAS.h +0 -255
  210. xtgeo/include/eigen3/Eigen/src/Core/products/TriangularSolverMatrix.h +0 -337
  211. xtgeo/include/eigen3/Eigen/src/Core/products/TriangularSolverMatrix_BLAS.h +0 -167
  212. xtgeo/include/eigen3/Eigen/src/Core/products/TriangularSolverVector.h +0 -148
  213. xtgeo/include/eigen3/Eigen/src/Core/util/BlasUtil.h +0 -583
  214. xtgeo/include/eigen3/Eigen/src/Core/util/ConfigureVectorization.h +0 -512
  215. xtgeo/include/eigen3/Eigen/src/Core/util/Constants.h +0 -563
  216. xtgeo/include/eigen3/Eigen/src/Core/util/DisableStupidWarnings.h +0 -106
  217. xtgeo/include/eigen3/Eigen/src/Core/util/ForwardDeclarations.h +0 -322
  218. xtgeo/include/eigen3/Eigen/src/Core/util/IndexedViewHelper.h +0 -186
  219. xtgeo/include/eigen3/Eigen/src/Core/util/IntegralConstant.h +0 -272
  220. xtgeo/include/eigen3/Eigen/src/Core/util/MKL_support.h +0 -137
  221. xtgeo/include/eigen3/Eigen/src/Core/util/Macros.h +0 -1464
  222. xtgeo/include/eigen3/Eigen/src/Core/util/Memory.h +0 -1163
  223. xtgeo/include/eigen3/Eigen/src/Core/util/Meta.h +0 -812
  224. xtgeo/include/eigen3/Eigen/src/Core/util/NonMPL2.h +0 -3
  225. xtgeo/include/eigen3/Eigen/src/Core/util/ReenableStupidWarnings.h +0 -31
  226. xtgeo/include/eigen3/Eigen/src/Core/util/ReshapedHelper.h +0 -51
  227. xtgeo/include/eigen3/Eigen/src/Core/util/StaticAssert.h +0 -221
  228. xtgeo/include/eigen3/Eigen/src/Core/util/SymbolicIndex.h +0 -293
  229. xtgeo/include/eigen3/Eigen/src/Core/util/XprHelper.h +0 -856
  230. xtgeo/include/eigen3/Eigen/src/Eigenvalues/ComplexEigenSolver.h +0 -346
  231. xtgeo/include/eigen3/Eigen/src/Eigenvalues/ComplexSchur.h +0 -462
  232. xtgeo/include/eigen3/Eigen/src/Eigenvalues/ComplexSchur_LAPACKE.h +0 -91
  233. xtgeo/include/eigen3/Eigen/src/Eigenvalues/EigenSolver.h +0 -622
  234. xtgeo/include/eigen3/Eigen/src/Eigenvalues/GeneralizedEigenSolver.h +0 -418
  235. xtgeo/include/eigen3/Eigen/src/Eigenvalues/GeneralizedSelfAdjointEigenSolver.h +0 -226
  236. xtgeo/include/eigen3/Eigen/src/Eigenvalues/HessenbergDecomposition.h +0 -374
  237. xtgeo/include/eigen3/Eigen/src/Eigenvalues/MatrixBaseEigenvalues.h +0 -158
  238. xtgeo/include/eigen3/Eigen/src/Eigenvalues/RealQZ.h +0 -657
  239. xtgeo/include/eigen3/Eigen/src/Eigenvalues/RealSchur.h +0 -558
  240. xtgeo/include/eigen3/Eigen/src/Eigenvalues/RealSchur_LAPACKE.h +0 -77
  241. xtgeo/include/eigen3/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h +0 -904
  242. xtgeo/include/eigen3/Eigen/src/Eigenvalues/SelfAdjointEigenSolver_LAPACKE.h +0 -87
  243. xtgeo/include/eigen3/Eigen/src/Eigenvalues/Tridiagonalization.h +0 -561
  244. xtgeo/include/eigen3/Eigen/src/Geometry/AlignedBox.h +0 -486
  245. xtgeo/include/eigen3/Eigen/src/Geometry/AngleAxis.h +0 -247
  246. xtgeo/include/eigen3/Eigen/src/Geometry/EulerAngles.h +0 -114
  247. xtgeo/include/eigen3/Eigen/src/Geometry/Homogeneous.h +0 -501
  248. xtgeo/include/eigen3/Eigen/src/Geometry/Hyperplane.h +0 -282
  249. xtgeo/include/eigen3/Eigen/src/Geometry/OrthoMethods.h +0 -235
  250. xtgeo/include/eigen3/Eigen/src/Geometry/ParametrizedLine.h +0 -232
  251. xtgeo/include/eigen3/Eigen/src/Geometry/Quaternion.h +0 -870
  252. xtgeo/include/eigen3/Eigen/src/Geometry/Rotation2D.h +0 -199
  253. xtgeo/include/eigen3/Eigen/src/Geometry/RotationBase.h +0 -206
  254. xtgeo/include/eigen3/Eigen/src/Geometry/Scaling.h +0 -188
  255. xtgeo/include/eigen3/Eigen/src/Geometry/Transform.h +0 -1563
  256. xtgeo/include/eigen3/Eigen/src/Geometry/Translation.h +0 -202
  257. xtgeo/include/eigen3/Eigen/src/Geometry/Umeyama.h +0 -166
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  489. xtgeo/include/eigen3/unsupported/Eigen/src/FFT/ei_kissfft_impl.h +0 -449
  490. xtgeo/include/eigen3/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h +0 -187
  491. xtgeo/include/eigen3/unsupported/Eigen/src/IterativeSolvers/DGMRES.h +0 -511
  492. xtgeo/include/eigen3/unsupported/Eigen/src/IterativeSolvers/GMRES.h +0 -335
  493. xtgeo/include/eigen3/unsupported/Eigen/src/IterativeSolvers/IDRS.h +0 -436
  494. xtgeo/include/eigen3/unsupported/Eigen/src/IterativeSolvers/IncompleteLU.h +0 -90
  495. xtgeo/include/eigen3/unsupported/Eigen/src/IterativeSolvers/IterationController.h +0 -154
  496. xtgeo/include/eigen3/unsupported/Eigen/src/IterativeSolvers/MINRES.h +0 -267
  497. xtgeo/include/eigen3/unsupported/Eigen/src/IterativeSolvers/Scaling.h +0 -193
  498. xtgeo/include/eigen3/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h +0 -305
  499. xtgeo/include/eigen3/unsupported/Eigen/src/LevenbergMarquardt/LMcovar.h +0 -84
  500. xtgeo/include/eigen3/unsupported/Eigen/src/LevenbergMarquardt/LMonestep.h +0 -202
  501. xtgeo/include/eigen3/unsupported/Eigen/src/LevenbergMarquardt/LMpar.h +0 -160
  502. xtgeo/include/eigen3/unsupported/Eigen/src/LevenbergMarquardt/LMqrsolv.h +0 -188
  503. xtgeo/include/eigen3/unsupported/Eigen/src/LevenbergMarquardt/LevenbergMarquardt.h +0 -396
  504. xtgeo/include/eigen3/unsupported/Eigen/src/MatrixFunctions/MatrixExponential.h +0 -441
  505. xtgeo/include/eigen3/unsupported/Eigen/src/MatrixFunctions/MatrixFunction.h +0 -569
  506. xtgeo/include/eigen3/unsupported/Eigen/src/MatrixFunctions/MatrixLogarithm.h +0 -373
  507. xtgeo/include/eigen3/unsupported/Eigen/src/MatrixFunctions/MatrixPower.h +0 -705
  508. xtgeo/include/eigen3/unsupported/Eigen/src/MatrixFunctions/MatrixSquareRoot.h +0 -368
  509. xtgeo/include/eigen3/unsupported/Eigen/src/MatrixFunctions/StemFunction.h +0 -117
  510. xtgeo/include/eigen3/unsupported/Eigen/src/MoreVectorization/MathFunctions.h +0 -95
  511. xtgeo/include/eigen3/unsupported/Eigen/src/NonLinearOptimization/HybridNonLinearSolver.h +0 -601
  512. xtgeo/include/eigen3/unsupported/Eigen/src/NonLinearOptimization/LevenbergMarquardt.h +0 -657
  513. xtgeo/include/eigen3/unsupported/Eigen/src/NonLinearOptimization/chkder.h +0 -66
  514. xtgeo/include/eigen3/unsupported/Eigen/src/NonLinearOptimization/covar.h +0 -70
  515. xtgeo/include/eigen3/unsupported/Eigen/src/NonLinearOptimization/dogleg.h +0 -107
  516. xtgeo/include/eigen3/unsupported/Eigen/src/NonLinearOptimization/fdjac1.h +0 -79
  517. xtgeo/include/eigen3/unsupported/Eigen/src/NonLinearOptimization/lmpar.h +0 -298
  518. xtgeo/include/eigen3/unsupported/Eigen/src/NonLinearOptimization/qrsolv.h +0 -91
  519. xtgeo/include/eigen3/unsupported/Eigen/src/NonLinearOptimization/r1mpyq.h +0 -30
  520. xtgeo/include/eigen3/unsupported/Eigen/src/NonLinearOptimization/r1updt.h +0 -99
  521. xtgeo/include/eigen3/unsupported/Eigen/src/NonLinearOptimization/rwupdt.h +0 -49
  522. xtgeo/include/eigen3/unsupported/Eigen/src/NumericalDiff/NumericalDiff.h +0 -130
  523. xtgeo/include/eigen3/unsupported/Eigen/src/Polynomials/Companion.h +0 -280
  524. xtgeo/include/eigen3/unsupported/Eigen/src/Polynomials/PolynomialSolver.h +0 -428
  525. xtgeo/include/eigen3/unsupported/Eigen/src/Polynomials/PolynomialUtils.h +0 -143
  526. xtgeo/include/eigen3/unsupported/Eigen/src/Skyline/SkylineInplaceLU.h +0 -352
  527. xtgeo/include/eigen3/unsupported/Eigen/src/Skyline/SkylineMatrix.h +0 -862
  528. xtgeo/include/eigen3/unsupported/Eigen/src/Skyline/SkylineMatrixBase.h +0 -212
  529. xtgeo/include/eigen3/unsupported/Eigen/src/Skyline/SkylineProduct.h +0 -295
  530. xtgeo/include/eigen3/unsupported/Eigen/src/Skyline/SkylineStorage.h +0 -259
  531. xtgeo/include/eigen3/unsupported/Eigen/src/Skyline/SkylineUtil.h +0 -89
  532. xtgeo/include/eigen3/unsupported/Eigen/src/SparseExtra/BlockOfDynamicSparseMatrix.h +0 -122
  533. xtgeo/include/eigen3/unsupported/Eigen/src/SparseExtra/BlockSparseMatrix.h +0 -1079
  534. xtgeo/include/eigen3/unsupported/Eigen/src/SparseExtra/DynamicSparseMatrix.h +0 -404
  535. xtgeo/include/eigen3/unsupported/Eigen/src/SparseExtra/MarketIO.h +0 -282
  536. xtgeo/include/eigen3/unsupported/Eigen/src/SparseExtra/MatrixMarketIterator.h +0 -247
  537. xtgeo/include/eigen3/unsupported/Eigen/src/SparseExtra/RandomSetter.h +0 -349
  538. xtgeo/include/eigen3/unsupported/Eigen/src/SpecialFunctions/BesselFunctionsArrayAPI.h +0 -286
  539. xtgeo/include/eigen3/unsupported/Eigen/src/SpecialFunctions/BesselFunctionsBFloat16.h +0 -68
  540. xtgeo/include/eigen3/unsupported/Eigen/src/SpecialFunctions/BesselFunctionsFunctors.h +0 -357
  541. xtgeo/include/eigen3/unsupported/Eigen/src/SpecialFunctions/BesselFunctionsHalf.h +0 -66
  542. xtgeo/include/eigen3/unsupported/Eigen/src/SpecialFunctions/BesselFunctionsImpl.h +0 -1959
  543. xtgeo/include/eigen3/unsupported/Eigen/src/SpecialFunctions/BesselFunctionsPacketMath.h +0 -118
  544. xtgeo/include/eigen3/unsupported/Eigen/src/SpecialFunctions/HipVectorCompatibility.h +0 -67
  545. xtgeo/include/eigen3/unsupported/Eigen/src/SpecialFunctions/SpecialFunctionsArrayAPI.h +0 -167
  546. xtgeo/include/eigen3/unsupported/Eigen/src/SpecialFunctions/SpecialFunctionsBFloat16.h +0 -58
  547. xtgeo/include/eigen3/unsupported/Eigen/src/SpecialFunctions/SpecialFunctionsFunctors.h +0 -330
  548. xtgeo/include/eigen3/unsupported/Eigen/src/SpecialFunctions/SpecialFunctionsHalf.h +0 -58
  549. xtgeo/include/eigen3/unsupported/Eigen/src/SpecialFunctions/SpecialFunctionsImpl.h +0 -2045
  550. xtgeo/include/eigen3/unsupported/Eigen/src/SpecialFunctions/SpecialFunctionsPacketMath.h +0 -79
  551. xtgeo/include/eigen3/unsupported/Eigen/src/SpecialFunctions/arch/AVX/BesselFunctions.h +0 -46
  552. xtgeo/include/eigen3/unsupported/Eigen/src/SpecialFunctions/arch/AVX/SpecialFunctions.h +0 -16
  553. xtgeo/include/eigen3/unsupported/Eigen/src/SpecialFunctions/arch/AVX512/BesselFunctions.h +0 -46
  554. xtgeo/include/eigen3/unsupported/Eigen/src/SpecialFunctions/arch/AVX512/SpecialFunctions.h +0 -16
  555. xtgeo/include/eigen3/unsupported/Eigen/src/SpecialFunctions/arch/GPU/SpecialFunctions.h +0 -369
  556. xtgeo/include/eigen3/unsupported/Eigen/src/SpecialFunctions/arch/NEON/BesselFunctions.h +0 -54
  557. xtgeo/include/eigen3/unsupported/Eigen/src/SpecialFunctions/arch/NEON/SpecialFunctions.h +0 -34
  558. xtgeo/include/eigen3/unsupported/Eigen/src/Splines/Spline.h +0 -507
  559. xtgeo/include/eigen3/unsupported/Eigen/src/Splines/SplineFitting.h +0 -431
  560. xtgeo/include/eigen3/unsupported/Eigen/src/Splines/SplineFwd.h +0 -93
  561. xtgeo/share/eigen3/cmake/Eigen3Config.cmake +0 -37
  562. xtgeo/share/eigen3/cmake/Eigen3ConfigVersion.cmake +0 -65
  563. xtgeo/share/eigen3/cmake/UseEigen3.cmake +0 -6
  564. xtgeo/share/pkgconfig/eigen3.pc +0 -9
  565. xtgeo-4.10.0.dist-info/RECORD +0 -652
  566. {xtgeo-4.10.0.dist-info → xtgeo-4.11.0.dist-info}/licenses/LICENSE.md +0 -0
@@ -1,1366 +0,0 @@
1
- // This file is part of Eigen, a lightweight C++ template library
2
- // for linear algebra.
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- //
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- // We used the "A Divide-And-Conquer Algorithm for the Bidiagonal SVD"
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- // research report written by Ming Gu and Stanley C.Eisenstat
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- // The code variable names correspond to the names they used in their
7
- // report
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- //
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- // Copyright (C) 2013 Gauthier Brun <brun.gauthier@gmail.com>
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- // Copyright (C) 2013 Nicolas Carre <nicolas.carre@ensimag.fr>
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- // Copyright (C) 2013 Jean Ceccato <jean.ceccato@ensimag.fr>
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- // Copyright (C) 2013 Pierre Zoppitelli <pierre.zoppitelli@ensimag.fr>
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- // Copyright (C) 2013 Jitse Niesen <jitse@maths.leeds.ac.uk>
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- // Copyright (C) 2014-2017 Gael Guennebaud <gael.guennebaud@inria.fr>
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- //
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- // Source Code Form is subject to the terms of the Mozilla
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- // Public License v. 2.0. If a copy of the MPL was not distributed
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- // with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
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-
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- #ifndef EIGEN_BDCSVD_H
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- #define EIGEN_BDCSVD_H
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- // #define EIGEN_BDCSVD_DEBUG_VERBOSE
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- // #define EIGEN_BDCSVD_SANITY_CHECKS
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-
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- #ifdef EIGEN_BDCSVD_SANITY_CHECKS
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- #undef eigen_internal_assert
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- #define eigen_internal_assert(X) assert(X);
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- #endif
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-
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- namespace Eigen {
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-
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- #ifdef EIGEN_BDCSVD_DEBUG_VERBOSE
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- IOFormat bdcsvdfmt(8, 0, ", ", "\n", " [", "]");
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- #endif
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-
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- template<typename _MatrixType> class BDCSVD;
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-
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- namespace internal {
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-
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- template<typename _MatrixType>
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- struct traits<BDCSVD<_MatrixType> >
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- : traits<_MatrixType>
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- {
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- typedef _MatrixType MatrixType;
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- };
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-
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- } // end namespace internal
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-
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-
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- /** \ingroup SVD_Module
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- *
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- *
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- * \class BDCSVD
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- *
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- * \brief class Bidiagonal Divide and Conquer SVD
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- *
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- * \tparam _MatrixType the type of the matrix of which we are computing the SVD decomposition
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- *
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- * This class first reduces the input matrix to bi-diagonal form using class UpperBidiagonalization,
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- * and then performs a divide-and-conquer diagonalization. Small blocks are diagonalized using class JacobiSVD.
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- * You can control the switching size with the setSwitchSize() method, default is 16.
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- * For small matrice (<16), it is thus preferable to directly use JacobiSVD. For larger ones, BDCSVD is highly
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- * recommended and can several order of magnitude faster.
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- *
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- * \warning this algorithm is unlikely to provide accurate result when compiled with unsafe math optimizations.
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- * For instance, this concerns Intel's compiler (ICC), which performs such optimization by default unless
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- * you compile with the \c -fp-model \c precise option. Likewise, the \c -ffast-math option of GCC or clang will
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- * significantly degrade the accuracy.
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- *
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- * \sa class JacobiSVD
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- */
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- template<typename _MatrixType>
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- class BDCSVD : public SVDBase<BDCSVD<_MatrixType> >
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- {
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- typedef SVDBase<BDCSVD> Base;
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-
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- public:
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- using Base::rows;
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- using Base::cols;
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- using Base::computeU;
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- using Base::computeV;
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-
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- typedef _MatrixType MatrixType;
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- typedef typename MatrixType::Scalar Scalar;
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- typedef typename NumTraits<typename MatrixType::Scalar>::Real RealScalar;
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- typedef typename NumTraits<RealScalar>::Literal Literal;
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- enum {
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- RowsAtCompileTime = MatrixType::RowsAtCompileTime,
89
- ColsAtCompileTime = MatrixType::ColsAtCompileTime,
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- DiagSizeAtCompileTime = EIGEN_SIZE_MIN_PREFER_DYNAMIC(RowsAtCompileTime, ColsAtCompileTime),
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- MaxRowsAtCompileTime = MatrixType::MaxRowsAtCompileTime,
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- MaxColsAtCompileTime = MatrixType::MaxColsAtCompileTime,
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- MaxDiagSizeAtCompileTime = EIGEN_SIZE_MIN_PREFER_FIXED(MaxRowsAtCompileTime, MaxColsAtCompileTime),
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- MatrixOptions = MatrixType::Options
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- };
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-
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- typedef typename Base::MatrixUType MatrixUType;
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- typedef typename Base::MatrixVType MatrixVType;
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- typedef typename Base::SingularValuesType SingularValuesType;
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-
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- typedef Matrix<Scalar, Dynamic, Dynamic, ColMajor> MatrixX;
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- typedef Matrix<RealScalar, Dynamic, Dynamic, ColMajor> MatrixXr;
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- typedef Matrix<RealScalar, Dynamic, 1> VectorType;
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- typedef Array<RealScalar, Dynamic, 1> ArrayXr;
105
- typedef Array<Index,1,Dynamic> ArrayXi;
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- typedef Ref<ArrayXr> ArrayRef;
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- typedef Ref<ArrayXi> IndicesRef;
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-
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- /** \brief Default Constructor.
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- *
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- * The default constructor is useful in cases in which the user intends to
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- * perform decompositions via BDCSVD::compute(const MatrixType&).
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- */
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- BDCSVD() : m_algoswap(16), m_isTranspose(false), m_compU(false), m_compV(false), m_numIters(0)
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- {}
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-
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-
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- /** \brief Default Constructor with memory preallocation
119
- *
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- * Like the default constructor but with preallocation of the internal data
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- * according to the specified problem size.
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- * \sa BDCSVD()
123
- */
124
- BDCSVD(Index rows, Index cols, unsigned int computationOptions = 0)
125
- : m_algoswap(16), m_numIters(0)
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- {
127
- allocate(rows, cols, computationOptions);
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- }
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-
130
- /** \brief Constructor performing the decomposition of given matrix.
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- *
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- * \param matrix the matrix to decompose
133
- * \param computationOptions optional parameter allowing to specify if you want full or thin U or V unitaries to be computed.
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- * By default, none is computed. This is a bit - field, the possible bits are #ComputeFullU, #ComputeThinU,
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- * #ComputeFullV, #ComputeThinV.
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- *
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- * Thin unitaries are only available if your matrix type has a Dynamic number of columns (for example MatrixXf). They also are not
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- * available with the (non - default) FullPivHouseholderQR preconditioner.
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- */
140
- BDCSVD(const MatrixType& matrix, unsigned int computationOptions = 0)
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- : m_algoswap(16), m_numIters(0)
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- {
143
- compute(matrix, computationOptions);
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- }
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-
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- ~BDCSVD()
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- {
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- }
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-
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- /** \brief Method performing the decomposition of given matrix using custom options.
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- *
152
- * \param matrix the matrix to decompose
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- * \param computationOptions optional parameter allowing to specify if you want full or thin U or V unitaries to be computed.
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- * By default, none is computed. This is a bit - field, the possible bits are #ComputeFullU, #ComputeThinU,
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- * #ComputeFullV, #ComputeThinV.
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- *
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- * Thin unitaries are only available if your matrix type has a Dynamic number of columns (for example MatrixXf). They also are not
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- * available with the (non - default) FullPivHouseholderQR preconditioner.
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- */
160
- BDCSVD& compute(const MatrixType& matrix, unsigned int computationOptions);
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-
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- /** \brief Method performing the decomposition of given matrix using current options.
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- *
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- * \param matrix the matrix to decompose
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- *
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- * This method uses the current \a computationOptions, as already passed to the constructor or to compute(const MatrixType&, unsigned int).
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- */
168
- BDCSVD& compute(const MatrixType& matrix)
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- {
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- return compute(matrix, this->m_computationOptions);
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- }
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-
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- void setSwitchSize(int s)
174
- {
175
- eigen_assert(s>3 && "BDCSVD the size of the algo switch has to be greater than 3");
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- m_algoswap = s;
177
- }
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-
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- private:
180
- void allocate(Index rows, Index cols, unsigned int computationOptions);
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- void divide(Index firstCol, Index lastCol, Index firstRowW, Index firstColW, Index shift);
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- void computeSVDofM(Index firstCol, Index n, MatrixXr& U, VectorType& singVals, MatrixXr& V);
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- void computeSingVals(const ArrayRef& col0, const ArrayRef& diag, const IndicesRef& perm, VectorType& singVals, ArrayRef shifts, ArrayRef mus);
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- void perturbCol0(const ArrayRef& col0, const ArrayRef& diag, const IndicesRef& perm, const VectorType& singVals, const ArrayRef& shifts, const ArrayRef& mus, ArrayRef zhat);
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- void computeSingVecs(const ArrayRef& zhat, const ArrayRef& diag, const IndicesRef& perm, const VectorType& singVals, const ArrayRef& shifts, const ArrayRef& mus, MatrixXr& U, MatrixXr& V);
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- void deflation43(Index firstCol, Index shift, Index i, Index size);
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- void deflation44(Index firstColu , Index firstColm, Index firstRowW, Index firstColW, Index i, Index j, Index size);
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- void deflation(Index firstCol, Index lastCol, Index k, Index firstRowW, Index firstColW, Index shift);
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- template<typename HouseholderU, typename HouseholderV, typename NaiveU, typename NaiveV>
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- void copyUV(const HouseholderU &householderU, const HouseholderV &householderV, const NaiveU &naiveU, const NaiveV &naivev);
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- void structured_update(Block<MatrixXr,Dynamic,Dynamic> A, const MatrixXr &B, Index n1);
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- static RealScalar secularEq(RealScalar x, const ArrayRef& col0, const ArrayRef& diag, const IndicesRef &perm, const ArrayRef& diagShifted, RealScalar shift);
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-
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- protected:
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- MatrixXr m_naiveU, m_naiveV;
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- MatrixXr m_computed;
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- Index m_nRec;
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- ArrayXr m_workspace;
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- ArrayXi m_workspaceI;
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- int m_algoswap;
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- bool m_isTranspose, m_compU, m_compV;
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-
203
- using Base::m_singularValues;
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- using Base::m_diagSize;
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- using Base::m_computeFullU;
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- using Base::m_computeFullV;
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- using Base::m_computeThinU;
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- using Base::m_computeThinV;
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- using Base::m_matrixU;
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- using Base::m_matrixV;
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- using Base::m_info;
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- using Base::m_isInitialized;
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- using Base::m_nonzeroSingularValues;
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-
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- public:
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- int m_numIters;
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- }; //end class BDCSVD
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-
219
-
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- // Method to allocate and initialize matrix and attributes
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- template<typename MatrixType>
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- void BDCSVD<MatrixType>::allocate(Eigen::Index rows, Eigen::Index cols, unsigned int computationOptions)
223
- {
224
- m_isTranspose = (cols > rows);
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-
226
- if (Base::allocate(rows, cols, computationOptions))
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- return;
228
-
229
- m_computed = MatrixXr::Zero(m_diagSize + 1, m_diagSize );
230
- m_compU = computeV();
231
- m_compV = computeU();
232
- if (m_isTranspose)
233
- std::swap(m_compU, m_compV);
234
-
235
- if (m_compU) m_naiveU = MatrixXr::Zero(m_diagSize + 1, m_diagSize + 1 );
236
- else m_naiveU = MatrixXr::Zero(2, m_diagSize + 1 );
237
-
238
- if (m_compV) m_naiveV = MatrixXr::Zero(m_diagSize, m_diagSize);
239
-
240
- m_workspace.resize((m_diagSize+1)*(m_diagSize+1)*3);
241
- m_workspaceI.resize(3*m_diagSize);
242
- }// end allocate
243
-
244
- template<typename MatrixType>
245
- BDCSVD<MatrixType>& BDCSVD<MatrixType>::compute(const MatrixType& matrix, unsigned int computationOptions)
246
- {
247
- #ifdef EIGEN_BDCSVD_DEBUG_VERBOSE
248
- std::cout << "\n\n\n======================================================================================================================\n\n\n";
249
- #endif
250
- allocate(matrix.rows(), matrix.cols(), computationOptions);
251
- using std::abs;
252
-
253
- const RealScalar considerZero = (std::numeric_limits<RealScalar>::min)();
254
-
255
- //**** step -1 - If the problem is too small, directly falls back to JacobiSVD and return
256
- if(matrix.cols() < m_algoswap)
257
- {
258
- // FIXME this line involves temporaries
259
- JacobiSVD<MatrixType> jsvd(matrix,computationOptions);
260
- m_isInitialized = true;
261
- m_info = jsvd.info();
262
- if (m_info == Success || m_info == NoConvergence) {
263
- if(computeU()) m_matrixU = jsvd.matrixU();
264
- if(computeV()) m_matrixV = jsvd.matrixV();
265
- m_singularValues = jsvd.singularValues();
266
- m_nonzeroSingularValues = jsvd.nonzeroSingularValues();
267
- }
268
- return *this;
269
- }
270
-
271
- //**** step 0 - Copy the input matrix and apply scaling to reduce over/under-flows
272
- RealScalar scale = matrix.cwiseAbs().template maxCoeff<PropagateNaN>();
273
- if (!(numext::isfinite)(scale)) {
274
- m_isInitialized = true;
275
- m_info = InvalidInput;
276
- return *this;
277
- }
278
-
279
- if(scale==Literal(0)) scale = Literal(1);
280
- MatrixX copy;
281
- if (m_isTranspose) copy = matrix.adjoint()/scale;
282
- else copy = matrix/scale;
283
-
284
- //**** step 1 - Bidiagonalization
285
- // FIXME this line involves temporaries
286
- internal::UpperBidiagonalization<MatrixX> bid(copy);
287
-
288
- //**** step 2 - Divide & Conquer
289
- m_naiveU.setZero();
290
- m_naiveV.setZero();
291
- // FIXME this line involves a temporary matrix
292
- m_computed.topRows(m_diagSize) = bid.bidiagonal().toDenseMatrix().transpose();
293
- m_computed.template bottomRows<1>().setZero();
294
- divide(0, m_diagSize - 1, 0, 0, 0);
295
- if (m_info != Success && m_info != NoConvergence) {
296
- m_isInitialized = true;
297
- return *this;
298
- }
299
-
300
- //**** step 3 - Copy singular values and vectors
301
- for (int i=0; i<m_diagSize; i++)
302
- {
303
- RealScalar a = abs(m_computed.coeff(i, i));
304
- m_singularValues.coeffRef(i) = a * scale;
305
- if (a<considerZero)
306
- {
307
- m_nonzeroSingularValues = i;
308
- m_singularValues.tail(m_diagSize - i - 1).setZero();
309
- break;
310
- }
311
- else if (i == m_diagSize - 1)
312
- {
313
- m_nonzeroSingularValues = i + 1;
314
- break;
315
- }
316
- }
317
-
318
- #ifdef EIGEN_BDCSVD_DEBUG_VERBOSE
319
- // std::cout << "m_naiveU\n" << m_naiveU << "\n\n";
320
- // std::cout << "m_naiveV\n" << m_naiveV << "\n\n";
321
- #endif
322
- if(m_isTranspose) copyUV(bid.householderV(), bid.householderU(), m_naiveV, m_naiveU);
323
- else copyUV(bid.householderU(), bid.householderV(), m_naiveU, m_naiveV);
324
-
325
- m_isInitialized = true;
326
- return *this;
327
- }// end compute
328
-
329
-
330
- template<typename MatrixType>
331
- template<typename HouseholderU, typename HouseholderV, typename NaiveU, typename NaiveV>
332
- void BDCSVD<MatrixType>::copyUV(const HouseholderU &householderU, const HouseholderV &householderV, const NaiveU &naiveU, const NaiveV &naiveV)
333
- {
334
- // Note exchange of U and V: m_matrixU is set from m_naiveV and vice versa
335
- if (computeU())
336
- {
337
- Index Ucols = m_computeThinU ? m_diagSize : householderU.cols();
338
- m_matrixU = MatrixX::Identity(householderU.cols(), Ucols);
339
- m_matrixU.topLeftCorner(m_diagSize, m_diagSize) = naiveV.template cast<Scalar>().topLeftCorner(m_diagSize, m_diagSize);
340
- householderU.applyThisOnTheLeft(m_matrixU); // FIXME this line involves a temporary buffer
341
- }
342
- if (computeV())
343
- {
344
- Index Vcols = m_computeThinV ? m_diagSize : householderV.cols();
345
- m_matrixV = MatrixX::Identity(householderV.cols(), Vcols);
346
- m_matrixV.topLeftCorner(m_diagSize, m_diagSize) = naiveU.template cast<Scalar>().topLeftCorner(m_diagSize, m_diagSize);
347
- householderV.applyThisOnTheLeft(m_matrixV); // FIXME this line involves a temporary buffer
348
- }
349
- }
350
-
351
- /** \internal
352
- * Performs A = A * B exploiting the special structure of the matrix A. Splitting A as:
353
- * A = [A1]
354
- * [A2]
355
- * such that A1.rows()==n1, then we assume that at least half of the columns of A1 and A2 are zeros.
356
- * We can thus pack them prior to the the matrix product. However, this is only worth the effort if the matrix is large
357
- * enough.
358
- */
359
- template<typename MatrixType>
360
- void BDCSVD<MatrixType>::structured_update(Block<MatrixXr,Dynamic,Dynamic> A, const MatrixXr &B, Index n1)
361
- {
362
- Index n = A.rows();
363
- if(n>100)
364
- {
365
- // If the matrices are large enough, let's exploit the sparse structure of A by
366
- // splitting it in half (wrt n1), and packing the non-zero columns.
367
- Index n2 = n - n1;
368
- Map<MatrixXr> A1(m_workspace.data() , n1, n);
369
- Map<MatrixXr> A2(m_workspace.data()+ n1*n, n2, n);
370
- Map<MatrixXr> B1(m_workspace.data()+ n*n, n, n);
371
- Map<MatrixXr> B2(m_workspace.data()+2*n*n, n, n);
372
- Index k1=0, k2=0;
373
- for(Index j=0; j<n; ++j)
374
- {
375
- if( (A.col(j).head(n1).array()!=Literal(0)).any() )
376
- {
377
- A1.col(k1) = A.col(j).head(n1);
378
- B1.row(k1) = B.row(j);
379
- ++k1;
380
- }
381
- if( (A.col(j).tail(n2).array()!=Literal(0)).any() )
382
- {
383
- A2.col(k2) = A.col(j).tail(n2);
384
- B2.row(k2) = B.row(j);
385
- ++k2;
386
- }
387
- }
388
-
389
- A.topRows(n1).noalias() = A1.leftCols(k1) * B1.topRows(k1);
390
- A.bottomRows(n2).noalias() = A2.leftCols(k2) * B2.topRows(k2);
391
- }
392
- else
393
- {
394
- Map<MatrixXr,Aligned> tmp(m_workspace.data(),n,n);
395
- tmp.noalias() = A*B;
396
- A = tmp;
397
- }
398
- }
399
-
400
- // The divide algorithm is done "in place", we are always working on subsets of the same matrix. The divide methods takes as argument the
401
- // place of the submatrix we are currently working on.
402
-
403
- //@param firstCol : The Index of the first column of the submatrix of m_computed and for m_naiveU;
404
- //@param lastCol : The Index of the last column of the submatrix of m_computed and for m_naiveU;
405
- // lastCol + 1 - firstCol is the size of the submatrix.
406
- //@param firstRowW : The Index of the first row of the matrix W that we are to change. (see the reference paper section 1 for more information on W)
407
- //@param firstRowW : Same as firstRowW with the column.
408
- //@param shift : Each time one takes the left submatrix, one must add 1 to the shift. Why? Because! We actually want the last column of the U submatrix
409
- // to become the first column (*coeff) and to shift all the other columns to the right. There are more details on the reference paper.
410
- template<typename MatrixType>
411
- void BDCSVD<MatrixType>::divide(Eigen::Index firstCol, Eigen::Index lastCol, Eigen::Index firstRowW, Eigen::Index firstColW, Eigen::Index shift)
412
- {
413
- // requires rows = cols + 1;
414
- using std::pow;
415
- using std::sqrt;
416
- using std::abs;
417
- const Index n = lastCol - firstCol + 1;
418
- const Index k = n/2;
419
- const RealScalar considerZero = (std::numeric_limits<RealScalar>::min)();
420
- RealScalar alphaK;
421
- RealScalar betaK;
422
- RealScalar r0;
423
- RealScalar lambda, phi, c0, s0;
424
- VectorType l, f;
425
- // We use the other algorithm which is more efficient for small
426
- // matrices.
427
- if (n < m_algoswap)
428
- {
429
- // FIXME this line involves temporaries
430
- JacobiSVD<MatrixXr> b(m_computed.block(firstCol, firstCol, n + 1, n), ComputeFullU | (m_compV ? ComputeFullV : 0));
431
- m_info = b.info();
432
- if (m_info != Success && m_info != NoConvergence) return;
433
- if (m_compU)
434
- m_naiveU.block(firstCol, firstCol, n + 1, n + 1).real() = b.matrixU();
435
- else
436
- {
437
- m_naiveU.row(0).segment(firstCol, n + 1).real() = b.matrixU().row(0);
438
- m_naiveU.row(1).segment(firstCol, n + 1).real() = b.matrixU().row(n);
439
- }
440
- if (m_compV) m_naiveV.block(firstRowW, firstColW, n, n).real() = b.matrixV();
441
- m_computed.block(firstCol + shift, firstCol + shift, n + 1, n).setZero();
442
- m_computed.diagonal().segment(firstCol + shift, n) = b.singularValues().head(n);
443
- return;
444
- }
445
- // We use the divide and conquer algorithm
446
- alphaK = m_computed(firstCol + k, firstCol + k);
447
- betaK = m_computed(firstCol + k + 1, firstCol + k);
448
- // The divide must be done in that order in order to have good results. Divide change the data inside the submatrices
449
- // and the divide of the right submatrice reads one column of the left submatrice. That's why we need to treat the
450
- // right submatrix before the left one.
451
- divide(k + 1 + firstCol, lastCol, k + 1 + firstRowW, k + 1 + firstColW, shift);
452
- if (m_info != Success && m_info != NoConvergence) return;
453
- divide(firstCol, k - 1 + firstCol, firstRowW, firstColW + 1, shift + 1);
454
- if (m_info != Success && m_info != NoConvergence) return;
455
-
456
- if (m_compU)
457
- {
458
- lambda = m_naiveU(firstCol + k, firstCol + k);
459
- phi = m_naiveU(firstCol + k + 1, lastCol + 1);
460
- }
461
- else
462
- {
463
- lambda = m_naiveU(1, firstCol + k);
464
- phi = m_naiveU(0, lastCol + 1);
465
- }
466
- r0 = sqrt((abs(alphaK * lambda) * abs(alphaK * lambda)) + abs(betaK * phi) * abs(betaK * phi));
467
- if (m_compU)
468
- {
469
- l = m_naiveU.row(firstCol + k).segment(firstCol, k);
470
- f = m_naiveU.row(firstCol + k + 1).segment(firstCol + k + 1, n - k - 1);
471
- }
472
- else
473
- {
474
- l = m_naiveU.row(1).segment(firstCol, k);
475
- f = m_naiveU.row(0).segment(firstCol + k + 1, n - k - 1);
476
- }
477
- if (m_compV) m_naiveV(firstRowW+k, firstColW) = Literal(1);
478
- if (r0<considerZero)
479
- {
480
- c0 = Literal(1);
481
- s0 = Literal(0);
482
- }
483
- else
484
- {
485
- c0 = alphaK * lambda / r0;
486
- s0 = betaK * phi / r0;
487
- }
488
-
489
- #ifdef EIGEN_BDCSVD_SANITY_CHECKS
490
- assert(m_naiveU.allFinite());
491
- assert(m_naiveV.allFinite());
492
- assert(m_computed.allFinite());
493
- #endif
494
-
495
- if (m_compU)
496
- {
497
- MatrixXr q1 (m_naiveU.col(firstCol + k).segment(firstCol, k + 1));
498
- // we shiftW Q1 to the right
499
- for (Index i = firstCol + k - 1; i >= firstCol; i--)
500
- m_naiveU.col(i + 1).segment(firstCol, k + 1) = m_naiveU.col(i).segment(firstCol, k + 1);
501
- // we shift q1 at the left with a factor c0
502
- m_naiveU.col(firstCol).segment( firstCol, k + 1) = (q1 * c0);
503
- // last column = q1 * - s0
504
- m_naiveU.col(lastCol + 1).segment(firstCol, k + 1) = (q1 * ( - s0));
505
- // first column = q2 * s0
506
- m_naiveU.col(firstCol).segment(firstCol + k + 1, n - k) = m_naiveU.col(lastCol + 1).segment(firstCol + k + 1, n - k) * s0;
507
- // q2 *= c0
508
- m_naiveU.col(lastCol + 1).segment(firstCol + k + 1, n - k) *= c0;
509
- }
510
- else
511
- {
512
- RealScalar q1 = m_naiveU(0, firstCol + k);
513
- // we shift Q1 to the right
514
- for (Index i = firstCol + k - 1; i >= firstCol; i--)
515
- m_naiveU(0, i + 1) = m_naiveU(0, i);
516
- // we shift q1 at the left with a factor c0
517
- m_naiveU(0, firstCol) = (q1 * c0);
518
- // last column = q1 * - s0
519
- m_naiveU(0, lastCol + 1) = (q1 * ( - s0));
520
- // first column = q2 * s0
521
- m_naiveU(1, firstCol) = m_naiveU(1, lastCol + 1) *s0;
522
- // q2 *= c0
523
- m_naiveU(1, lastCol + 1) *= c0;
524
- m_naiveU.row(1).segment(firstCol + 1, k).setZero();
525
- m_naiveU.row(0).segment(firstCol + k + 1, n - k - 1).setZero();
526
- }
527
-
528
- #ifdef EIGEN_BDCSVD_SANITY_CHECKS
529
- assert(m_naiveU.allFinite());
530
- assert(m_naiveV.allFinite());
531
- assert(m_computed.allFinite());
532
- #endif
533
-
534
- m_computed(firstCol + shift, firstCol + shift) = r0;
535
- m_computed.col(firstCol + shift).segment(firstCol + shift + 1, k) = alphaK * l.transpose().real();
536
- m_computed.col(firstCol + shift).segment(firstCol + shift + k + 1, n - k - 1) = betaK * f.transpose().real();
537
-
538
- #ifdef EIGEN_BDCSVD_DEBUG_VERBOSE
539
- ArrayXr tmp1 = (m_computed.block(firstCol+shift, firstCol+shift, n, n)).jacobiSvd().singularValues();
540
- #endif
541
- // Second part: try to deflate singular values in combined matrix
542
- deflation(firstCol, lastCol, k, firstRowW, firstColW, shift);
543
- #ifdef EIGEN_BDCSVD_DEBUG_VERBOSE
544
- ArrayXr tmp2 = (m_computed.block(firstCol+shift, firstCol+shift, n, n)).jacobiSvd().singularValues();
545
- std::cout << "\n\nj1 = " << tmp1.transpose().format(bdcsvdfmt) << "\n";
546
- std::cout << "j2 = " << tmp2.transpose().format(bdcsvdfmt) << "\n\n";
547
- std::cout << "err: " << ((tmp1-tmp2).abs()>1e-12*tmp2.abs()).transpose() << "\n";
548
- static int count = 0;
549
- std::cout << "# " << ++count << "\n\n";
550
- assert((tmp1-tmp2).matrix().norm() < 1e-14*tmp2.matrix().norm());
551
- // assert(count<681);
552
- // assert(((tmp1-tmp2).abs()<1e-13*tmp2.abs()).all());
553
- #endif
554
-
555
- // Third part: compute SVD of combined matrix
556
- MatrixXr UofSVD, VofSVD;
557
- VectorType singVals;
558
- computeSVDofM(firstCol + shift, n, UofSVD, singVals, VofSVD);
559
-
560
- #ifdef EIGEN_BDCSVD_SANITY_CHECKS
561
- assert(UofSVD.allFinite());
562
- assert(VofSVD.allFinite());
563
- #endif
564
-
565
- if (m_compU)
566
- structured_update(m_naiveU.block(firstCol, firstCol, n + 1, n + 1), UofSVD, (n+2)/2);
567
- else
568
- {
569
- Map<Matrix<RealScalar,2,Dynamic>,Aligned> tmp(m_workspace.data(),2,n+1);
570
- tmp.noalias() = m_naiveU.middleCols(firstCol, n+1) * UofSVD;
571
- m_naiveU.middleCols(firstCol, n + 1) = tmp;
572
- }
573
-
574
- if (m_compV) structured_update(m_naiveV.block(firstRowW, firstColW, n, n), VofSVD, (n+1)/2);
575
-
576
- #ifdef EIGEN_BDCSVD_SANITY_CHECKS
577
- assert(m_naiveU.allFinite());
578
- assert(m_naiveV.allFinite());
579
- assert(m_computed.allFinite());
580
- #endif
581
-
582
- m_computed.block(firstCol + shift, firstCol + shift, n, n).setZero();
583
- m_computed.block(firstCol + shift, firstCol + shift, n, n).diagonal() = singVals;
584
- }// end divide
585
-
586
- // Compute SVD of m_computed.block(firstCol, firstCol, n + 1, n); this block only has non-zeros in
587
- // the first column and on the diagonal and has undergone deflation, so diagonal is in increasing
588
- // order except for possibly the (0,0) entry. The computed SVD is stored U, singVals and V, except
589
- // that if m_compV is false, then V is not computed. Singular values are sorted in decreasing order.
590
- //
591
- // TODO Opportunities for optimization: better root finding algo, better stopping criterion, better
592
- // handling of round-off errors, be consistent in ordering
593
- // For instance, to solve the secular equation using FMM, see http://www.stat.uchicago.edu/~lekheng/courses/302/classics/greengard-rokhlin.pdf
594
- template <typename MatrixType>
595
- void BDCSVD<MatrixType>::computeSVDofM(Eigen::Index firstCol, Eigen::Index n, MatrixXr& U, VectorType& singVals, MatrixXr& V)
596
- {
597
- const RealScalar considerZero = (std::numeric_limits<RealScalar>::min)();
598
- using std::abs;
599
- ArrayRef col0 = m_computed.col(firstCol).segment(firstCol, n);
600
- m_workspace.head(n) = m_computed.block(firstCol, firstCol, n, n).diagonal();
601
- ArrayRef diag = m_workspace.head(n);
602
- diag(0) = Literal(0);
603
-
604
- // Allocate space for singular values and vectors
605
- singVals.resize(n);
606
- U.resize(n+1, n+1);
607
- if (m_compV) V.resize(n, n);
608
-
609
- #ifdef EIGEN_BDCSVD_DEBUG_VERBOSE
610
- if (col0.hasNaN() || diag.hasNaN())
611
- std::cout << "\n\nHAS NAN\n\n";
612
- #endif
613
-
614
- // Many singular values might have been deflated, the zero ones have been moved to the end,
615
- // but others are interleaved and we must ignore them at this stage.
616
- // To this end, let's compute a permutation skipping them:
617
- Index actual_n = n;
618
- while(actual_n>1 && diag(actual_n-1)==Literal(0)) {--actual_n; eigen_internal_assert(col0(actual_n)==Literal(0)); }
619
- Index m = 0; // size of the deflated problem
620
- for(Index k=0;k<actual_n;++k)
621
- if(abs(col0(k))>considerZero)
622
- m_workspaceI(m++) = k;
623
- Map<ArrayXi> perm(m_workspaceI.data(),m);
624
-
625
- Map<ArrayXr> shifts(m_workspace.data()+1*n, n);
626
- Map<ArrayXr> mus(m_workspace.data()+2*n, n);
627
- Map<ArrayXr> zhat(m_workspace.data()+3*n, n);
628
-
629
- #ifdef EIGEN_BDCSVD_DEBUG_VERBOSE
630
- std::cout << "computeSVDofM using:\n";
631
- std::cout << " z: " << col0.transpose() << "\n";
632
- std::cout << " d: " << diag.transpose() << "\n";
633
- #endif
634
-
635
- // Compute singVals, shifts, and mus
636
- computeSingVals(col0, diag, perm, singVals, shifts, mus);
637
-
638
- #ifdef EIGEN_BDCSVD_DEBUG_VERBOSE
639
- std::cout << " j: " << (m_computed.block(firstCol, firstCol, n, n)).jacobiSvd().singularValues().transpose().reverse() << "\n\n";
640
- std::cout << " sing-val: " << singVals.transpose() << "\n";
641
- std::cout << " mu: " << mus.transpose() << "\n";
642
- std::cout << " shift: " << shifts.transpose() << "\n";
643
-
644
- {
645
- std::cout << "\n\n mus: " << mus.head(actual_n).transpose() << "\n\n";
646
- std::cout << " check1 (expect0) : " << ((singVals.array()-(shifts+mus)) / singVals.array()).head(actual_n).transpose() << "\n\n";
647
- assert((((singVals.array()-(shifts+mus)) / singVals.array()).head(actual_n) >= 0).all());
648
- std::cout << " check2 (>0) : " << ((singVals.array()-diag) / singVals.array()).head(actual_n).transpose() << "\n\n";
649
- assert((((singVals.array()-diag) / singVals.array()).head(actual_n) >= 0).all());
650
- }
651
- #endif
652
-
653
- #ifdef EIGEN_BDCSVD_SANITY_CHECKS
654
- assert(singVals.allFinite());
655
- assert(mus.allFinite());
656
- assert(shifts.allFinite());
657
- #endif
658
-
659
- // Compute zhat
660
- perturbCol0(col0, diag, perm, singVals, shifts, mus, zhat);
661
- #ifdef EIGEN_BDCSVD_DEBUG_VERBOSE
662
- std::cout << " zhat: " << zhat.transpose() << "\n";
663
- #endif
664
-
665
- #ifdef EIGEN_BDCSVD_SANITY_CHECKS
666
- assert(zhat.allFinite());
667
- #endif
668
-
669
- computeSingVecs(zhat, diag, perm, singVals, shifts, mus, U, V);
670
-
671
- #ifdef EIGEN_BDCSVD_DEBUG_VERBOSE
672
- std::cout << "U^T U: " << (U.transpose() * U - MatrixXr(MatrixXr::Identity(U.cols(),U.cols()))).norm() << "\n";
673
- std::cout << "V^T V: " << (V.transpose() * V - MatrixXr(MatrixXr::Identity(V.cols(),V.cols()))).norm() << "\n";
674
- #endif
675
-
676
- #ifdef EIGEN_BDCSVD_SANITY_CHECKS
677
- assert(m_naiveU.allFinite());
678
- assert(m_naiveV.allFinite());
679
- assert(m_computed.allFinite());
680
- assert(U.allFinite());
681
- assert(V.allFinite());
682
- // assert((U.transpose() * U - MatrixXr(MatrixXr::Identity(U.cols(),U.cols()))).norm() < 100*NumTraits<RealScalar>::epsilon() * n);
683
- // assert((V.transpose() * V - MatrixXr(MatrixXr::Identity(V.cols(),V.cols()))).norm() < 100*NumTraits<RealScalar>::epsilon() * n);
684
- #endif
685
-
686
- // Because of deflation, the singular values might not be completely sorted.
687
- // Fortunately, reordering them is a O(n) problem
688
- for(Index i=0; i<actual_n-1; ++i)
689
- {
690
- if(singVals(i)>singVals(i+1))
691
- {
692
- using std::swap;
693
- swap(singVals(i),singVals(i+1));
694
- U.col(i).swap(U.col(i+1));
695
- if(m_compV) V.col(i).swap(V.col(i+1));
696
- }
697
- }
698
-
699
- #ifdef EIGEN_BDCSVD_SANITY_CHECKS
700
- {
701
- bool singular_values_sorted = (((singVals.segment(1,actual_n-1)-singVals.head(actual_n-1))).array() >= 0).all();
702
- if(!singular_values_sorted)
703
- std::cout << "Singular values are not sorted: " << singVals.segment(1,actual_n).transpose() << "\n";
704
- assert(singular_values_sorted);
705
- }
706
- #endif
707
-
708
- // Reverse order so that singular values in increased order
709
- // Because of deflation, the zeros singular-values are already at the end
710
- singVals.head(actual_n).reverseInPlace();
711
- U.leftCols(actual_n).rowwise().reverseInPlace();
712
- if (m_compV) V.leftCols(actual_n).rowwise().reverseInPlace();
713
-
714
- #ifdef EIGEN_BDCSVD_DEBUG_VERBOSE
715
- JacobiSVD<MatrixXr> jsvd(m_computed.block(firstCol, firstCol, n, n) );
716
- std::cout << " * j: " << jsvd.singularValues().transpose() << "\n\n";
717
- std::cout << " * sing-val: " << singVals.transpose() << "\n";
718
- // std::cout << " * err: " << ((jsvd.singularValues()-singVals)>1e-13*singVals.norm()).transpose() << "\n";
719
- #endif
720
- }
721
-
722
- template <typename MatrixType>
723
- typename BDCSVD<MatrixType>::RealScalar BDCSVD<MatrixType>::secularEq(RealScalar mu, const ArrayRef& col0, const ArrayRef& diag, const IndicesRef &perm, const ArrayRef& diagShifted, RealScalar shift)
724
- {
725
- Index m = perm.size();
726
- RealScalar res = Literal(1);
727
- for(Index i=0; i<m; ++i)
728
- {
729
- Index j = perm(i);
730
- // The following expression could be rewritten to involve only a single division,
731
- // but this would make the expression more sensitive to overflow.
732
- res += (col0(j) / (diagShifted(j) - mu)) * (col0(j) / (diag(j) + shift + mu));
733
- }
734
- return res;
735
-
736
- }
737
-
738
- template <typename MatrixType>
739
- void BDCSVD<MatrixType>::computeSingVals(const ArrayRef& col0, const ArrayRef& diag, const IndicesRef &perm,
740
- VectorType& singVals, ArrayRef shifts, ArrayRef mus)
741
- {
742
- using std::abs;
743
- using std::swap;
744
- using std::sqrt;
745
-
746
- Index n = col0.size();
747
- Index actual_n = n;
748
- // Note that here actual_n is computed based on col0(i)==0 instead of diag(i)==0 as above
749
- // because 1) we have diag(i)==0 => col0(i)==0 and 2) if col0(i)==0, then diag(i) is already a singular value.
750
- while(actual_n>1 && col0(actual_n-1)==Literal(0)) --actual_n;
751
-
752
- for (Index k = 0; k < n; ++k)
753
- {
754
- if (col0(k) == Literal(0) || actual_n==1)
755
- {
756
- // if col0(k) == 0, then entry is deflated, so singular value is on diagonal
757
- // if actual_n==1, then the deflated problem is already diagonalized
758
- singVals(k) = k==0 ? col0(0) : diag(k);
759
- mus(k) = Literal(0);
760
- shifts(k) = k==0 ? col0(0) : diag(k);
761
- continue;
762
- }
763
-
764
- // otherwise, use secular equation to find singular value
765
- RealScalar left = diag(k);
766
- RealScalar right; // was: = (k != actual_n-1) ? diag(k+1) : (diag(actual_n-1) + col0.matrix().norm());
767
- if(k==actual_n-1)
768
- right = (diag(actual_n-1) + col0.matrix().norm());
769
- else
770
- {
771
- // Skip deflated singular values,
772
- // recall that at this stage we assume that z[j]!=0 and all entries for which z[j]==0 have been put aside.
773
- // This should be equivalent to using perm[]
774
- Index l = k+1;
775
- while(col0(l)==Literal(0)) { ++l; eigen_internal_assert(l<actual_n); }
776
- right = diag(l);
777
- }
778
-
779
- // first decide whether it's closer to the left end or the right end
780
- RealScalar mid = left + (right-left) / Literal(2);
781
- RealScalar fMid = secularEq(mid, col0, diag, perm, diag, Literal(0));
782
- #ifdef EIGEN_BDCSVD_DEBUG_VERBOSE
783
- std::cout << "right-left = " << right-left << "\n";
784
- // std::cout << "fMid = " << fMid << " " << secularEq(mid-left, col0, diag, perm, ArrayXr(diag-left), left)
785
- // << " " << secularEq(mid-right, col0, diag, perm, ArrayXr(diag-right), right) << "\n";
786
- std::cout << " = " << secularEq(left+RealScalar(0.000001)*(right-left), col0, diag, perm, diag, 0)
787
- << " " << secularEq(left+RealScalar(0.1) *(right-left), col0, diag, perm, diag, 0)
788
- << " " << secularEq(left+RealScalar(0.2) *(right-left), col0, diag, perm, diag, 0)
789
- << " " << secularEq(left+RealScalar(0.3) *(right-left), col0, diag, perm, diag, 0)
790
- << " " << secularEq(left+RealScalar(0.4) *(right-left), col0, diag, perm, diag, 0)
791
- << " " << secularEq(left+RealScalar(0.49) *(right-left), col0, diag, perm, diag, 0)
792
- << " " << secularEq(left+RealScalar(0.5) *(right-left), col0, diag, perm, diag, 0)
793
- << " " << secularEq(left+RealScalar(0.51) *(right-left), col0, diag, perm, diag, 0)
794
- << " " << secularEq(left+RealScalar(0.6) *(right-left), col0, diag, perm, diag, 0)
795
- << " " << secularEq(left+RealScalar(0.7) *(right-left), col0, diag, perm, diag, 0)
796
- << " " << secularEq(left+RealScalar(0.8) *(right-left), col0, diag, perm, diag, 0)
797
- << " " << secularEq(left+RealScalar(0.9) *(right-left), col0, diag, perm, diag, 0)
798
- << " " << secularEq(left+RealScalar(0.999999)*(right-left), col0, diag, perm, diag, 0) << "\n";
799
- #endif
800
- RealScalar shift = (k == actual_n-1 || fMid > Literal(0)) ? left : right;
801
-
802
- // measure everything relative to shift
803
- Map<ArrayXr> diagShifted(m_workspace.data()+4*n, n);
804
- diagShifted = diag - shift;
805
-
806
- if(k!=actual_n-1)
807
- {
808
- // check that after the shift, f(mid) is still negative:
809
- RealScalar midShifted = (right - left) / RealScalar(2);
810
- if(shift==right)
811
- midShifted = -midShifted;
812
- RealScalar fMidShifted = secularEq(midShifted, col0, diag, perm, diagShifted, shift);
813
- if(fMidShifted>0)
814
- {
815
- // fMid was erroneous, fix it:
816
- shift = fMidShifted > Literal(0) ? left : right;
817
- diagShifted = diag - shift;
818
- }
819
- }
820
-
821
- // initial guess
822
- RealScalar muPrev, muCur;
823
- if (shift == left)
824
- {
825
- muPrev = (right - left) * RealScalar(0.1);
826
- if (k == actual_n-1) muCur = right - left;
827
- else muCur = (right - left) * RealScalar(0.5);
828
- }
829
- else
830
- {
831
- muPrev = -(right - left) * RealScalar(0.1);
832
- muCur = -(right - left) * RealScalar(0.5);
833
- }
834
-
835
- RealScalar fPrev = secularEq(muPrev, col0, diag, perm, diagShifted, shift);
836
- RealScalar fCur = secularEq(muCur, col0, diag, perm, diagShifted, shift);
837
- if (abs(fPrev) < abs(fCur))
838
- {
839
- swap(fPrev, fCur);
840
- swap(muPrev, muCur);
841
- }
842
-
843
- // rational interpolation: fit a function of the form a / mu + b through the two previous
844
- // iterates and use its zero to compute the next iterate
845
- bool useBisection = fPrev*fCur>Literal(0);
846
- while (fCur!=Literal(0) && abs(muCur - muPrev) > Literal(8) * NumTraits<RealScalar>::epsilon() * numext::maxi<RealScalar>(abs(muCur), abs(muPrev)) && abs(fCur - fPrev)>NumTraits<RealScalar>::epsilon() && !useBisection)
847
- {
848
- ++m_numIters;
849
-
850
- // Find a and b such that the function f(mu) = a / mu + b matches the current and previous samples.
851
- RealScalar a = (fCur - fPrev) / (Literal(1)/muCur - Literal(1)/muPrev);
852
- RealScalar b = fCur - a / muCur;
853
- // And find mu such that f(mu)==0:
854
- RealScalar muZero = -a/b;
855
- RealScalar fZero = secularEq(muZero, col0, diag, perm, diagShifted, shift);
856
-
857
- #ifdef EIGEN_BDCSVD_SANITY_CHECKS
858
- assert((numext::isfinite)(fZero));
859
- #endif
860
-
861
- muPrev = muCur;
862
- fPrev = fCur;
863
- muCur = muZero;
864
- fCur = fZero;
865
-
866
- if (shift == left && (muCur < Literal(0) || muCur > right - left)) useBisection = true;
867
- if (shift == right && (muCur < -(right - left) || muCur > Literal(0))) useBisection = true;
868
- if (abs(fCur)>abs(fPrev)) useBisection = true;
869
- }
870
-
871
- // fall back on bisection method if rational interpolation did not work
872
- if (useBisection)
873
- {
874
- #ifdef EIGEN_BDCSVD_DEBUG_VERBOSE
875
- std::cout << "useBisection for k = " << k << ", actual_n = " << actual_n << "\n";
876
- #endif
877
- RealScalar leftShifted, rightShifted;
878
- if (shift == left)
879
- {
880
- // to avoid overflow, we must have mu > max(real_min, |z(k)|/sqrt(real_max)),
881
- // the factor 2 is to be more conservative
882
- leftShifted = numext::maxi<RealScalar>( (std::numeric_limits<RealScalar>::min)(), Literal(2) * abs(col0(k)) / sqrt((std::numeric_limits<RealScalar>::max)()) );
883
-
884
- // check that we did it right:
885
- eigen_internal_assert( (numext::isfinite)( (col0(k)/leftShifted)*(col0(k)/(diag(k)+shift+leftShifted)) ) );
886
- // I don't understand why the case k==0 would be special there:
887
- // if (k == 0) rightShifted = right - left; else
888
- rightShifted = (k==actual_n-1) ? right : ((right - left) * RealScalar(0.51)); // theoretically we can take 0.5, but let's be safe
889
- }
890
- else
891
- {
892
- leftShifted = -(right - left) * RealScalar(0.51);
893
- if(k+1<n)
894
- rightShifted = -numext::maxi<RealScalar>( (std::numeric_limits<RealScalar>::min)(), abs(col0(k+1)) / sqrt((std::numeric_limits<RealScalar>::max)()) );
895
- else
896
- rightShifted = -(std::numeric_limits<RealScalar>::min)();
897
- }
898
-
899
- RealScalar fLeft = secularEq(leftShifted, col0, diag, perm, diagShifted, shift);
900
- eigen_internal_assert(fLeft<Literal(0));
901
-
902
- #if defined EIGEN_INTERNAL_DEBUGGING || defined EIGEN_BDCSVD_SANITY_CHECKS
903
- RealScalar fRight = secularEq(rightShifted, col0, diag, perm, diagShifted, shift);
904
- #endif
905
-
906
- #ifdef EIGEN_BDCSVD_SANITY_CHECKS
907
- if(!(numext::isfinite)(fLeft))
908
- std::cout << "f(" << leftShifted << ") =" << fLeft << " ; " << left << " " << shift << " " << right << "\n";
909
- assert((numext::isfinite)(fLeft));
910
-
911
- if(!(numext::isfinite)(fRight))
912
- std::cout << "f(" << rightShifted << ") =" << fRight << " ; " << left << " " << shift << " " << right << "\n";
913
- // assert((numext::isfinite)(fRight));
914
- #endif
915
-
916
- #ifdef EIGEN_BDCSVD_DEBUG_VERBOSE
917
- if(!(fLeft * fRight<0))
918
- {
919
- std::cout << "f(leftShifted) using leftShifted=" << leftShifted << " ; diagShifted(1:10):" << diagShifted.head(10).transpose() << "\n ; "
920
- << "left==shift=" << bool(left==shift) << " ; left-shift = " << (left-shift) << "\n";
921
- std::cout << "k=" << k << ", " << fLeft << " * " << fRight << " == " << fLeft * fRight << " ; "
922
- << "[" << left << " .. " << right << "] -> [" << leftShifted << " " << rightShifted << "], shift=" << shift
923
- << " , f(right)=" << secularEq(0, col0, diag, perm, diagShifted, shift)
924
- << " == " << secularEq(right, col0, diag, perm, diag, 0) << " == " << fRight << "\n";
925
- }
926
- #endif
927
- eigen_internal_assert(fLeft * fRight < Literal(0));
928
-
929
- if(fLeft<Literal(0))
930
- {
931
- while (rightShifted - leftShifted > Literal(2) * NumTraits<RealScalar>::epsilon() * numext::maxi<RealScalar>(abs(leftShifted), abs(rightShifted)))
932
- {
933
- RealScalar midShifted = (leftShifted + rightShifted) / Literal(2);
934
- fMid = secularEq(midShifted, col0, diag, perm, diagShifted, shift);
935
- eigen_internal_assert((numext::isfinite)(fMid));
936
-
937
- if (fLeft * fMid < Literal(0))
938
- {
939
- rightShifted = midShifted;
940
- }
941
- else
942
- {
943
- leftShifted = midShifted;
944
- fLeft = fMid;
945
- }
946
- }
947
- muCur = (leftShifted + rightShifted) / Literal(2);
948
- }
949
- else
950
- {
951
- // We have a problem as shifting on the left or right give either a positive or negative value
952
- // at the middle of [left,right]...
953
- // Instead fo abbording or entering an infinite loop,
954
- // let's just use the middle as the estimated zero-crossing:
955
- muCur = (right - left) * RealScalar(0.5);
956
- if(shift == right)
957
- muCur = -muCur;
958
- }
959
- }
960
-
961
- singVals[k] = shift + muCur;
962
- shifts[k] = shift;
963
- mus[k] = muCur;
964
-
965
- #ifdef EIGEN_BDCSVD_DEBUG_VERBOSE
966
- if(k+1<n)
967
- std::cout << "found " << singVals[k] << " == " << shift << " + " << muCur << " from " << diag(k) << " .. " << diag(k+1) << "\n";
968
- #endif
969
- #ifdef EIGEN_BDCSVD_SANITY_CHECKS
970
- assert(k==0 || singVals[k]>=singVals[k-1]);
971
- assert(singVals[k]>=diag(k));
972
- #endif
973
-
974
- // perturb singular value slightly if it equals diagonal entry to avoid division by zero later
975
- // (deflation is supposed to avoid this from happening)
976
- // - this does no seem to be necessary anymore -
977
- // if (singVals[k] == left) singVals[k] *= 1 + NumTraits<RealScalar>::epsilon();
978
- // if (singVals[k] == right) singVals[k] *= 1 - NumTraits<RealScalar>::epsilon();
979
- }
980
- }
981
-
982
-
983
- // zhat is perturbation of col0 for which singular vectors can be computed stably (see Section 3.1)
984
- template <typename MatrixType>
985
- void BDCSVD<MatrixType>::perturbCol0
986
- (const ArrayRef& col0, const ArrayRef& diag, const IndicesRef &perm, const VectorType& singVals,
987
- const ArrayRef& shifts, const ArrayRef& mus, ArrayRef zhat)
988
- {
989
- using std::sqrt;
990
- Index n = col0.size();
991
- Index m = perm.size();
992
- if(m==0)
993
- {
994
- zhat.setZero();
995
- return;
996
- }
997
- Index lastIdx = perm(m-1);
998
- // The offset permits to skip deflated entries while computing zhat
999
- for (Index k = 0; k < n; ++k)
1000
- {
1001
- if (col0(k) == Literal(0)) // deflated
1002
- zhat(k) = Literal(0);
1003
- else
1004
- {
1005
- // see equation (3.6)
1006
- RealScalar dk = diag(k);
1007
- RealScalar prod = (singVals(lastIdx) + dk) * (mus(lastIdx) + (shifts(lastIdx) - dk));
1008
- #ifdef EIGEN_BDCSVD_SANITY_CHECKS
1009
- if(prod<0) {
1010
- std::cout << "k = " << k << " ; z(k)=" << col0(k) << ", diag(k)=" << dk << "\n";
1011
- std::cout << "prod = " << "(" << singVals(lastIdx) << " + " << dk << ") * (" << mus(lastIdx) << " + (" << shifts(lastIdx) << " - " << dk << "))" << "\n";
1012
- std::cout << " = " << singVals(lastIdx) + dk << " * " << mus(lastIdx) + (shifts(lastIdx) - dk) << "\n";
1013
- }
1014
- assert(prod>=0);
1015
- #endif
1016
-
1017
- for(Index l = 0; l<m; ++l)
1018
- {
1019
- Index i = perm(l);
1020
- if(i!=k)
1021
- {
1022
- #ifdef EIGEN_BDCSVD_SANITY_CHECKS
1023
- if(i>=k && (l==0 || l-1>=m))
1024
- {
1025
- std::cout << "Error in perturbCol0\n";
1026
- std::cout << " " << k << "/" << n << " " << l << "/" << m << " " << i << "/" << n << " ; " << col0(k) << " " << diag(k) << " " << "\n";
1027
- std::cout << " " <<diag(i) << "\n";
1028
- Index j = (i<k /*|| l==0*/) ? i : perm(l-1);
1029
- std::cout << " " << "j=" << j << "\n";
1030
- }
1031
- #endif
1032
- Index j = i<k ? i : perm(l-1);
1033
- #ifdef EIGEN_BDCSVD_SANITY_CHECKS
1034
- if(!(dk!=Literal(0) || diag(i)!=Literal(0)))
1035
- {
1036
- std::cout << "k=" << k << ", i=" << i << ", l=" << l << ", perm.size()=" << perm.size() << "\n";
1037
- }
1038
- assert(dk!=Literal(0) || diag(i)!=Literal(0));
1039
- #endif
1040
- prod *= ((singVals(j)+dk) / ((diag(i)+dk))) * ((mus(j)+(shifts(j)-dk)) / ((diag(i)-dk)));
1041
- #ifdef EIGEN_BDCSVD_SANITY_CHECKS
1042
- assert(prod>=0);
1043
- #endif
1044
- #ifdef EIGEN_BDCSVD_DEBUG_VERBOSE
1045
- if(i!=k && numext::abs(((singVals(j)+dk)*(mus(j)+(shifts(j)-dk)))/((diag(i)+dk)*(diag(i)-dk)) - 1) > 0.9 )
1046
- std::cout << " " << ((singVals(j)+dk)*(mus(j)+(shifts(j)-dk)))/((diag(i)+dk)*(diag(i)-dk)) << " == (" << (singVals(j)+dk) << " * " << (mus(j)+(shifts(j)-dk))
1047
- << ") / (" << (diag(i)+dk) << " * " << (diag(i)-dk) << ")\n";
1048
- #endif
1049
- }
1050
- }
1051
- #ifdef EIGEN_BDCSVD_DEBUG_VERBOSE
1052
- std::cout << "zhat(" << k << ") = sqrt( " << prod << ") ; " << (singVals(lastIdx) + dk) << " * " << mus(lastIdx) + shifts(lastIdx) << " - " << dk << "\n";
1053
- #endif
1054
- RealScalar tmp = sqrt(prod);
1055
- #ifdef EIGEN_BDCSVD_SANITY_CHECKS
1056
- assert((numext::isfinite)(tmp));
1057
- #endif
1058
- zhat(k) = col0(k) > Literal(0) ? RealScalar(tmp) : RealScalar(-tmp);
1059
- }
1060
- }
1061
- }
1062
-
1063
- // compute singular vectors
1064
- template <typename MatrixType>
1065
- void BDCSVD<MatrixType>::computeSingVecs
1066
- (const ArrayRef& zhat, const ArrayRef& diag, const IndicesRef &perm, const VectorType& singVals,
1067
- const ArrayRef& shifts, const ArrayRef& mus, MatrixXr& U, MatrixXr& V)
1068
- {
1069
- Index n = zhat.size();
1070
- Index m = perm.size();
1071
-
1072
- for (Index k = 0; k < n; ++k)
1073
- {
1074
- if (zhat(k) == Literal(0))
1075
- {
1076
- U.col(k) = VectorType::Unit(n+1, k);
1077
- if (m_compV) V.col(k) = VectorType::Unit(n, k);
1078
- }
1079
- else
1080
- {
1081
- U.col(k).setZero();
1082
- for(Index l=0;l<m;++l)
1083
- {
1084
- Index i = perm(l);
1085
- U(i,k) = zhat(i)/(((diag(i) - shifts(k)) - mus(k)) )/( (diag(i) + singVals[k]));
1086
- }
1087
- U(n,k) = Literal(0);
1088
- U.col(k).normalize();
1089
-
1090
- if (m_compV)
1091
- {
1092
- V.col(k).setZero();
1093
- for(Index l=1;l<m;++l)
1094
- {
1095
- Index i = perm(l);
1096
- V(i,k) = diag(i) * zhat(i) / (((diag(i) - shifts(k)) - mus(k)) )/( (diag(i) + singVals[k]));
1097
- }
1098
- V(0,k) = Literal(-1);
1099
- V.col(k).normalize();
1100
- }
1101
- }
1102
- }
1103
- U.col(n) = VectorType::Unit(n+1, n);
1104
- }
1105
-
1106
-
1107
- // page 12_13
1108
- // i >= 1, di almost null and zi non null.
1109
- // We use a rotation to zero out zi applied to the left of M
1110
- template <typename MatrixType>
1111
- void BDCSVD<MatrixType>::deflation43(Eigen::Index firstCol, Eigen::Index shift, Eigen::Index i, Eigen::Index size)
1112
- {
1113
- using std::abs;
1114
- using std::sqrt;
1115
- using std::pow;
1116
- Index start = firstCol + shift;
1117
- RealScalar c = m_computed(start, start);
1118
- RealScalar s = m_computed(start+i, start);
1119
- RealScalar r = numext::hypot(c,s);
1120
- if (r == Literal(0))
1121
- {
1122
- m_computed(start+i, start+i) = Literal(0);
1123
- return;
1124
- }
1125
- m_computed(start,start) = r;
1126
- m_computed(start+i, start) = Literal(0);
1127
- m_computed(start+i, start+i) = Literal(0);
1128
-
1129
- JacobiRotation<RealScalar> J(c/r,-s/r);
1130
- if (m_compU) m_naiveU.middleRows(firstCol, size+1).applyOnTheRight(firstCol, firstCol+i, J);
1131
- else m_naiveU.applyOnTheRight(firstCol, firstCol+i, J);
1132
- }// end deflation 43
1133
-
1134
-
1135
- // page 13
1136
- // i,j >= 1, i!=j and |di - dj| < epsilon * norm2(M)
1137
- // We apply two rotations to have zj = 0;
1138
- // TODO deflation44 is still broken and not properly tested
1139
- template <typename MatrixType>
1140
- void BDCSVD<MatrixType>::deflation44(Eigen::Index firstColu , Eigen::Index firstColm, Eigen::Index firstRowW, Eigen::Index firstColW, Eigen::Index i, Eigen::Index j, Eigen::Index size)
1141
- {
1142
- using std::abs;
1143
- using std::sqrt;
1144
- using std::conj;
1145
- using std::pow;
1146
- RealScalar c = m_computed(firstColm+i, firstColm);
1147
- RealScalar s = m_computed(firstColm+j, firstColm);
1148
- RealScalar r = sqrt(numext::abs2(c) + numext::abs2(s));
1149
- #ifdef EIGEN_BDCSVD_DEBUG_VERBOSE
1150
- std::cout << "deflation 4.4: " << i << "," << j << " -> " << c << " " << s << " " << r << " ; "
1151
- << m_computed(firstColm + i-1, firstColm) << " "
1152
- << m_computed(firstColm + i, firstColm) << " "
1153
- << m_computed(firstColm + i+1, firstColm) << " "
1154
- << m_computed(firstColm + i+2, firstColm) << "\n";
1155
- std::cout << m_computed(firstColm + i-1, firstColm + i-1) << " "
1156
- << m_computed(firstColm + i, firstColm+i) << " "
1157
- << m_computed(firstColm + i+1, firstColm+i+1) << " "
1158
- << m_computed(firstColm + i+2, firstColm+i+2) << "\n";
1159
- #endif
1160
- if (r==Literal(0))
1161
- {
1162
- m_computed(firstColm + i, firstColm + i) = m_computed(firstColm + j, firstColm + j);
1163
- return;
1164
- }
1165
- c/=r;
1166
- s/=r;
1167
- m_computed(firstColm + i, firstColm) = r;
1168
- m_computed(firstColm + j, firstColm + j) = m_computed(firstColm + i, firstColm + i);
1169
- m_computed(firstColm + j, firstColm) = Literal(0);
1170
-
1171
- JacobiRotation<RealScalar> J(c,-s);
1172
- if (m_compU) m_naiveU.middleRows(firstColu, size+1).applyOnTheRight(firstColu + i, firstColu + j, J);
1173
- else m_naiveU.applyOnTheRight(firstColu+i, firstColu+j, J);
1174
- if (m_compV) m_naiveV.middleRows(firstRowW, size).applyOnTheRight(firstColW + i, firstColW + j, J);
1175
- }// end deflation 44
1176
-
1177
-
1178
- // acts on block from (firstCol+shift, firstCol+shift) to (lastCol+shift, lastCol+shift) [inclusive]
1179
- template <typename MatrixType>
1180
- void BDCSVD<MatrixType>::deflation(Eigen::Index firstCol, Eigen::Index lastCol, Eigen::Index k, Eigen::Index firstRowW, Eigen::Index firstColW, Eigen::Index shift)
1181
- {
1182
- using std::sqrt;
1183
- using std::abs;
1184
- const Index length = lastCol + 1 - firstCol;
1185
-
1186
- Block<MatrixXr,Dynamic,1> col0(m_computed, firstCol+shift, firstCol+shift, length, 1);
1187
- Diagonal<MatrixXr> fulldiag(m_computed);
1188
- VectorBlock<Diagonal<MatrixXr>,Dynamic> diag(fulldiag, firstCol+shift, length);
1189
-
1190
- const RealScalar considerZero = (std::numeric_limits<RealScalar>::min)();
1191
- RealScalar maxDiag = diag.tail((std::max)(Index(1),length-1)).cwiseAbs().maxCoeff();
1192
- RealScalar epsilon_strict = numext::maxi<RealScalar>(considerZero,NumTraits<RealScalar>::epsilon() * maxDiag);
1193
- RealScalar epsilon_coarse = Literal(8) * NumTraits<RealScalar>::epsilon() * numext::maxi<RealScalar>(col0.cwiseAbs().maxCoeff(), maxDiag);
1194
-
1195
- #ifdef EIGEN_BDCSVD_SANITY_CHECKS
1196
- assert(m_naiveU.allFinite());
1197
- assert(m_naiveV.allFinite());
1198
- assert(m_computed.allFinite());
1199
- #endif
1200
-
1201
- #ifdef EIGEN_BDCSVD_DEBUG_VERBOSE
1202
- std::cout << "\ndeflate:" << diag.head(k+1).transpose() << " | " << diag.segment(k+1,length-k-1).transpose() << "\n";
1203
- #endif
1204
-
1205
- //condition 4.1
1206
- if (diag(0) < epsilon_coarse)
1207
- {
1208
- #ifdef EIGEN_BDCSVD_DEBUG_VERBOSE
1209
- std::cout << "deflation 4.1, because " << diag(0) << " < " << epsilon_coarse << "\n";
1210
- #endif
1211
- diag(0) = epsilon_coarse;
1212
- }
1213
-
1214
- //condition 4.2
1215
- for (Index i=1;i<length;++i)
1216
- if (abs(col0(i)) < epsilon_strict)
1217
- {
1218
- #ifdef EIGEN_BDCSVD_DEBUG_VERBOSE
1219
- std::cout << "deflation 4.2, set z(" << i << ") to zero because " << abs(col0(i)) << " < " << epsilon_strict << " (diag(" << i << ")=" << diag(i) << ")\n";
1220
- #endif
1221
- col0(i) = Literal(0);
1222
- }
1223
-
1224
- //condition 4.3
1225
- for (Index i=1;i<length; i++)
1226
- if (diag(i) < epsilon_coarse)
1227
- {
1228
- #ifdef EIGEN_BDCSVD_DEBUG_VERBOSE
1229
- std::cout << "deflation 4.3, cancel z(" << i << ")=" << col0(i) << " because diag(" << i << ")=" << diag(i) << " < " << epsilon_coarse << "\n";
1230
- #endif
1231
- deflation43(firstCol, shift, i, length);
1232
- }
1233
-
1234
- #ifdef EIGEN_BDCSVD_SANITY_CHECKS
1235
- assert(m_naiveU.allFinite());
1236
- assert(m_naiveV.allFinite());
1237
- assert(m_computed.allFinite());
1238
- #endif
1239
- #ifdef EIGEN_BDCSVD_DEBUG_VERBOSE
1240
- std::cout << "to be sorted: " << diag.transpose() << "\n\n";
1241
- std::cout << " : " << col0.transpose() << "\n\n";
1242
- #endif
1243
- {
1244
- // Check for total deflation
1245
- // If we have a total deflation, then we have to consider col0(0)==diag(0) as a singular value during sorting
1246
- bool total_deflation = (col0.tail(length-1).array()<considerZero).all();
1247
-
1248
- // Sort the diagonal entries, since diag(1:k-1) and diag(k:length) are already sorted, let's do a sorted merge.
1249
- // First, compute the respective permutation.
1250
- Index *permutation = m_workspaceI.data();
1251
- {
1252
- permutation[0] = 0;
1253
- Index p = 1;
1254
-
1255
- // Move deflated diagonal entries at the end.
1256
- for(Index i=1; i<length; ++i)
1257
- if(abs(diag(i))<considerZero)
1258
- permutation[p++] = i;
1259
-
1260
- Index i=1, j=k+1;
1261
- for( ; p < length; ++p)
1262
- {
1263
- if (i > k) permutation[p] = j++;
1264
- else if (j >= length) permutation[p] = i++;
1265
- else if (diag(i) < diag(j)) permutation[p] = j++;
1266
- else permutation[p] = i++;
1267
- }
1268
- }
1269
-
1270
- // If we have a total deflation, then we have to insert diag(0) at the right place
1271
- if(total_deflation)
1272
- {
1273
- for(Index i=1; i<length; ++i)
1274
- {
1275
- Index pi = permutation[i];
1276
- if(abs(diag(pi))<considerZero || diag(0)<diag(pi))
1277
- permutation[i-1] = permutation[i];
1278
- else
1279
- {
1280
- permutation[i-1] = 0;
1281
- break;
1282
- }
1283
- }
1284
- }
1285
-
1286
- // Current index of each col, and current column of each index
1287
- Index *realInd = m_workspaceI.data()+length;
1288
- Index *realCol = m_workspaceI.data()+2*length;
1289
-
1290
- for(int pos = 0; pos< length; pos++)
1291
- {
1292
- realCol[pos] = pos;
1293
- realInd[pos] = pos;
1294
- }
1295
-
1296
- for(Index i = total_deflation?0:1; i < length; i++)
1297
- {
1298
- const Index pi = permutation[length - (total_deflation ? i+1 : i)];
1299
- const Index J = realCol[pi];
1300
-
1301
- using std::swap;
1302
- // swap diagonal and first column entries:
1303
- swap(diag(i), diag(J));
1304
- if(i!=0 && J!=0) swap(col0(i), col0(J));
1305
-
1306
- // change columns
1307
- if (m_compU) m_naiveU.col(firstCol+i).segment(firstCol, length + 1).swap(m_naiveU.col(firstCol+J).segment(firstCol, length + 1));
1308
- else m_naiveU.col(firstCol+i).segment(0, 2) .swap(m_naiveU.col(firstCol+J).segment(0, 2));
1309
- if (m_compV) m_naiveV.col(firstColW + i).segment(firstRowW, length).swap(m_naiveV.col(firstColW + J).segment(firstRowW, length));
1310
-
1311
- //update real pos
1312
- const Index realI = realInd[i];
1313
- realCol[realI] = J;
1314
- realCol[pi] = i;
1315
- realInd[J] = realI;
1316
- realInd[i] = pi;
1317
- }
1318
- }
1319
- #ifdef EIGEN_BDCSVD_DEBUG_VERBOSE
1320
- std::cout << "sorted: " << diag.transpose().format(bdcsvdfmt) << "\n";
1321
- std::cout << " : " << col0.transpose() << "\n\n";
1322
- #endif
1323
-
1324
- //condition 4.4
1325
- {
1326
- Index i = length-1;
1327
- while(i>0 && (abs(diag(i))<considerZero || abs(col0(i))<considerZero)) --i;
1328
- for(; i>1;--i)
1329
- if( (diag(i) - diag(i-1)) < NumTraits<RealScalar>::epsilon()*maxDiag )
1330
- {
1331
- #ifdef EIGEN_BDCSVD_DEBUG_VERBOSE
1332
- std::cout << "deflation 4.4 with i = " << i << " because " << diag(i) << " - " << diag(i-1) << " == " << (diag(i) - diag(i-1)) << " < " << NumTraits<RealScalar>::epsilon()*/*diag(i)*/maxDiag << "\n";
1333
- #endif
1334
- eigen_internal_assert(abs(diag(i) - diag(i-1))<epsilon_coarse && " diagonal entries are not properly sorted");
1335
- deflation44(firstCol, firstCol + shift, firstRowW, firstColW, i-1, i, length);
1336
- }
1337
- }
1338
-
1339
- #ifdef EIGEN_BDCSVD_SANITY_CHECKS
1340
- for(Index j=2;j<length;++j)
1341
- assert(diag(j-1)<=diag(j) || abs(diag(j))<considerZero);
1342
- #endif
1343
-
1344
- #ifdef EIGEN_BDCSVD_SANITY_CHECKS
1345
- assert(m_naiveU.allFinite());
1346
- assert(m_naiveV.allFinite());
1347
- assert(m_computed.allFinite());
1348
- #endif
1349
- }//end deflation
1350
-
1351
- /** \svd_module
1352
- *
1353
- * \return the singular value decomposition of \c *this computed by Divide & Conquer algorithm
1354
- *
1355
- * \sa class BDCSVD
1356
- */
1357
- template<typename Derived>
1358
- BDCSVD<typename MatrixBase<Derived>::PlainObject>
1359
- MatrixBase<Derived>::bdcSvd(unsigned int computationOptions) const
1360
- {
1361
- return BDCSVD<PlainObject>(*this, computationOptions);
1362
- }
1363
-
1364
- } // end namespace Eigen
1365
-
1366
- #endif