xcoll 0.3.3__py3-none-any.whl → 0.3.5__py3-none-any.whl

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Files changed (317) hide show
  1. xcoll/beam_elements/__init__.py +5 -0
  2. xcoll/beam_elements/absorber.py +2 -1
  3. xcoll/beam_elements/base.py +32 -17
  4. xcoll/beam_elements/collimators_src/absorber.h +5 -0
  5. xcoll/beam_elements/everest.py +14 -25
  6. xcoll/colldb.py +50 -27
  7. xcoll/general.py +1 -1
  8. xcoll/headers/checks.h +7 -1
  9. xcoll/impacts/impacts.py +2 -1
  10. xcoll/impacts/impacts_src/impacts.h +1 -6
  11. xcoll/manager.py +5 -5
  12. xcoll/rf_sweep.py +90 -19
  13. xcoll/scattering_routines/everest/__init__.py +5 -0
  14. xcoll/scattering_routines/everest/everest.py +1 -1
  15. xcoll/scattering_routines/fluka/build_fluka_input.py +58 -0
  16. xcoll/scattering_routines/fluka/flukaio/lib/libFlukaIO64.a +0 -0
  17. xcoll/scattering_routines/fluka/flukaio/lib/libFlukaIO64.so +0 -0
  18. xcoll/scattering_routines/fluka/flukaio/src/Connection.d +68 -48
  19. xcoll/scattering_routines/fluka/flukaio/src/Connection.o +0 -0
  20. xcoll/scattering_routines/fluka/flukaio/src/FlukaIO.d +46 -37
  21. xcoll/scattering_routines/fluka/flukaio/src/FlukaIO.o +0 -0
  22. xcoll/scattering_routines/fluka/flukaio/src/FlukaIOHandshake.d +28 -25
  23. xcoll/scattering_routines/fluka/flukaio/src/FlukaIOHandshake.o +0 -0
  24. xcoll/scattering_routines/fluka/flukaio/src/FlukaIOServer.d +67 -47
  25. xcoll/scattering_routines/fluka/flukaio/src/FlukaIOServer.o +0 -0
  26. xcoll/scattering_routines/fluka/flukaio/src/FortranFlukaIO.d +39 -33
  27. xcoll/scattering_routines/fluka/flukaio/src/FortranFlukaIO.o +0 -0
  28. xcoll/scattering_routines/fluka/flukaio/src/NetIO.d +66 -47
  29. xcoll/scattering_routines/fluka/flukaio/src/NetIO.o +0 -0
  30. {xcoll-0.3.3.dist-info → xcoll-0.3.5.dist-info}/METADATA +3 -2
  31. xcoll-0.3.5.dist-info/NOTICE +2 -0
  32. xcoll-0.3.5.dist-info/RECORD +111 -0
  33. {xcoll-0.3.3.dist-info → xcoll-0.3.5.dist-info}/WHEEL +1 -1
  34. xcoll/beam_elements/collimators_src/base_block.h +0 -14
  35. xcoll/beam_elements/collimators_src/base_collimator.h +0 -14
  36. xcoll/beam_elements/collimators_src/invalid_collimator.h +0 -15
  37. xcoll/install_collimators.py +0 -180
  38. xcoll/scattering_routines/geant4/collimasim/.git +0 -1
  39. xcoll/scattering_routines/geant4/collimasim/.gitignore +0 -12
  40. xcoll/scattering_routines/geant4/collimasim/.gitmodules +0 -3
  41. xcoll/scattering_routines/geant4/collimasim/CMakeLists.txt +0 -26
  42. xcoll/scattering_routines/geant4/collimasim/README.md +0 -21
  43. xcoll/scattering_routines/geant4/collimasim/docs/Makefile +0 -20
  44. xcoll/scattering_routines/geant4/collimasim/docs/make.bat +0 -35
  45. xcoll/scattering_routines/geant4/collimasim/docs/source/collimasim.rst +0 -10
  46. xcoll/scattering_routines/geant4/collimasim/docs/source/conf.py +0 -59
  47. xcoll/scattering_routines/geant4/collimasim/docs/source/index.rst +0 -26
  48. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.appveyor.yml +0 -37
  49. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.clang-format +0 -19
  50. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.clang-tidy +0 -65
  51. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.cmake-format.yaml +0 -73
  52. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.git +0 -1
  53. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/CODEOWNERS +0 -9
  54. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/CONTRIBUTING.md +0 -386
  55. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/ISSUE_TEMPLATE/bug-report.yml +0 -45
  56. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/ISSUE_TEMPLATE/config.yml +0 -8
  57. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/dependabot.yml +0 -16
  58. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/labeler.yml +0 -8
  59. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/labeler_merged.yml +0 -3
  60. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/pull_request_template.md +0 -19
  61. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/workflows/ci.yml +0 -969
  62. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/workflows/configure.yml +0 -84
  63. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/workflows/format.yml +0 -48
  64. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/workflows/labeler.yml +0 -16
  65. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/workflows/pip.yml +0 -103
  66. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.gitignore +0 -45
  67. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.pre-commit-config.yaml +0 -151
  68. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.readthedocs.yml +0 -3
  69. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/CMakeLists.txt +0 -297
  70. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/LICENSE +0 -29
  71. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/MANIFEST.in +0 -6
  72. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/README.rst +0 -180
  73. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/Doxyfile +0 -23
  74. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/Makefile +0 -192
  75. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/_static/theme_overrides.css +0 -11
  76. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/chrono.rst +0 -81
  77. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/custom.rst +0 -93
  78. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/eigen.rst +0 -310
  79. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/functional.rst +0 -109
  80. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/index.rst +0 -43
  81. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/overview.rst +0 -171
  82. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/stl.rst +0 -251
  83. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/strings.rst +0 -305
  84. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/classes.rst +0 -1297
  85. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/embedding.rst +0 -262
  86. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/exceptions.rst +0 -396
  87. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/functions.rst +0 -568
  88. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/misc.rst +0 -337
  89. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/pycpp/index.rst +0 -13
  90. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/pycpp/numpy.rst +0 -463
  91. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/pycpp/object.rst +0 -286
  92. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/pycpp/utilities.rst +0 -155
  93. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/smart_ptrs.rst +0 -174
  94. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/basics.rst +0 -308
  95. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/benchmark.py +0 -91
  96. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/benchmark.rst +0 -95
  97. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/changelog.rst +0 -2050
  98. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/classes.rst +0 -542
  99. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/cmake/index.rst +0 -8
  100. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/compiling.rst +0 -648
  101. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/conf.py +0 -381
  102. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/faq.rst +0 -343
  103. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/index.rst +0 -48
  104. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/installing.rst +0 -105
  105. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/limitations.rst +0 -72
  106. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/pybind11-logo.png +0 -0
  107. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/pybind11_vs_boost_python1.png +0 -0
  108. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/pybind11_vs_boost_python1.svg +0 -427
  109. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/pybind11_vs_boost_python2.png +0 -0
  110. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/pybind11_vs_boost_python2.svg +0 -427
  111. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/reference.rst +0 -130
  112. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/release.rst +0 -96
  113. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/requirements.txt +0 -8
  114. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/upgrade.rst +0 -548
  115. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/attr.h +0 -605
  116. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/buffer_info.h +0 -144
  117. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/cast.h +0 -1432
  118. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/chrono.h +0 -213
  119. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/common.h +0 -2
  120. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/complex.h +0 -65
  121. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/class.h +0 -709
  122. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/common.h +0 -1021
  123. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/descr.h +0 -104
  124. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/init.h +0 -346
  125. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/internals.h +0 -467
  126. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/type_caster_base.h +0 -978
  127. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/typeid.h +0 -55
  128. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/eigen.h +0 -606
  129. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/embed.h +0 -284
  130. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/eval.h +0 -163
  131. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/functional.h +0 -121
  132. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/gil.h +0 -193
  133. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/iostream.h +0 -275
  134. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/numpy.h +0 -1741
  135. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/operators.h +0 -163
  136. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/options.h +0 -65
  137. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/pybind11.h +0 -2497
  138. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/pytypes.h +0 -1879
  139. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/stl/filesystem.h +0 -103
  140. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/stl.h +0 -375
  141. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/stl_bind.h +0 -747
  142. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/noxfile.py +0 -88
  143. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/__init__.py +0 -11
  144. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/__main__.py +0 -52
  145. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/_version.py +0 -12
  146. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/_version.pyi +0 -6
  147. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/commands.py +0 -21
  148. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/py.typed +0 -0
  149. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/setup_helpers.py +0 -482
  150. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/setup_helpers.pyi +0 -63
  151. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pyproject.toml +0 -41
  152. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/setup.cfg +0 -56
  153. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/setup.py +0 -155
  154. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/CMakeLists.txt +0 -503
  155. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/conftest.py +0 -208
  156. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/constructor_stats.h +0 -275
  157. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/cross_module_gil_utils.cpp +0 -73
  158. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/env.py +0 -33
  159. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/extra_python_package/pytest.ini +0 -0
  160. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/extra_python_package/test_files.py +0 -279
  161. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/extra_setuptools/pytest.ini +0 -0
  162. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/extra_setuptools/test_setuphelper.py +0 -143
  163. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/local_bindings.h +0 -85
  164. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/object.h +0 -179
  165. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/pybind11_cross_module_tests.cpp +0 -151
  166. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/pybind11_tests.cpp +0 -91
  167. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/pybind11_tests.h +0 -85
  168. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/pytest.ini +0 -19
  169. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/requirements.txt +0 -12
  170. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_async.cpp +0 -26
  171. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_async.py +0 -25
  172. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_buffers.cpp +0 -216
  173. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_buffers.py +0 -163
  174. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_builtin_casters.cpp +0 -286
  175. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_builtin_casters.py +0 -536
  176. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_call_policies.cpp +0 -107
  177. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_call_policies.py +0 -248
  178. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_callbacks.cpp +0 -227
  179. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_callbacks.py +0 -202
  180. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_chrono.cpp +0 -84
  181. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_chrono.py +0 -210
  182. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_class.cpp +0 -550
  183. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_class.py +0 -473
  184. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/CMakeLists.txt +0 -84
  185. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/embed.cpp +0 -21
  186. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/installed_embed/CMakeLists.txt +0 -28
  187. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/installed_function/CMakeLists.txt +0 -39
  188. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/installed_target/CMakeLists.txt +0 -46
  189. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/main.cpp +0 -6
  190. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/subdirectory_embed/CMakeLists.txt +0 -41
  191. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/subdirectory_function/CMakeLists.txt +0 -35
  192. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/subdirectory_target/CMakeLists.txt +0 -41
  193. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/test.py +0 -10
  194. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_constants_and_functions.cpp +0 -165
  195. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_constants_and_functions.py +0 -53
  196. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_copy_move.cpp +0 -238
  197. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_copy_move.py +0 -126
  198. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_custom_type_casters.cpp +0 -141
  199. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_custom_type_casters.py +0 -117
  200. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_custom_type_setup.cpp +0 -41
  201. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_custom_type_setup.py +0 -50
  202. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_docstring_options.cpp +0 -69
  203. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_docstring_options.py +0 -42
  204. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_eigen.cpp +0 -348
  205. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_eigen.py +0 -771
  206. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_embed/CMakeLists.txt +0 -47
  207. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_embed/catch.cpp +0 -22
  208. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_embed/external_module.cpp +0 -23
  209. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_embed/test_interpreter.cpp +0 -326
  210. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_embed/test_interpreter.py +0 -15
  211. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_enum.cpp +0 -148
  212. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_enum.py +0 -272
  213. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_eval.cpp +0 -119
  214. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_eval.py +0 -51
  215. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_eval_call.py +0 -5
  216. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_exceptions.cpp +0 -285
  217. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_exceptions.h +0 -12
  218. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_exceptions.py +0 -265
  219. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_factory_constructors.cpp +0 -397
  220. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_factory_constructors.py +0 -520
  221. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_gil_scoped.cpp +0 -49
  222. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_gil_scoped.py +0 -94
  223. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_iostream.cpp +0 -125
  224. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_iostream.py +0 -331
  225. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_kwargs_and_defaults.cpp +0 -153
  226. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_kwargs_and_defaults.py +0 -284
  227. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_local_bindings.cpp +0 -107
  228. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_local_bindings.py +0 -257
  229. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_methods_and_attributes.cpp +0 -412
  230. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_methods_and_attributes.py +0 -517
  231. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_modules.cpp +0 -102
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  233. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_multiple_inheritance.cpp +0 -233
  234. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_multiple_inheritance.py +0 -360
  235. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_numpy_array.cpp +0 -472
  236. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_numpy_array.py +0 -593
  237. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_numpy_dtypes.cpp +0 -524
  238. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_numpy_dtypes.py +0 -441
  239. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_numpy_vectorize.cpp +0 -103
  240. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_numpy_vectorize.py +0 -267
  241. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_opaque_types.cpp +0 -73
  242. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_opaque_types.py +0 -59
  243. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_operator_overloading.cpp +0 -235
  244. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_operator_overloading.py +0 -146
  245. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_pickling.cpp +0 -189
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  247. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_pytypes.cpp +0 -560
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  249. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_sequences_and_iterators.cpp +0 -500
  250. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_sequences_and_iterators.py +0 -253
  251. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_smart_ptr.cpp +0 -452
  252. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_smart_ptr.py +0 -318
  253. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_stl.cpp +0 -342
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  255. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_stl_binders.cpp +0 -131
  256. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_stl_binders.py +0 -318
  257. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_tagbased_polymorphic.cpp +0 -144
  258. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_tagbased_polymorphic.py +0 -29
  259. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_thread.cpp +0 -66
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  282. xcoll/scattering_routines/geant4/collimasim/setup.py +0 -144
  283. xcoll/scattering_routines/geant4/collimasim/src/collimasim/BDSPyATInterface.cpp +0 -403
  284. xcoll/scattering_routines/geant4/collimasim/src/collimasim/BDSPyATInterface.hh +0 -100
  285. xcoll/scattering_routines/geant4/collimasim/src/collimasim/BDSXtrackInterface.cpp +0 -662
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  287. xcoll/scattering_routines/geant4/collimasim/src/collimasim/__init__.py +0 -8
  288. xcoll/scattering_routines/geant4/collimasim/src/collimasim/bindings.cpp +0 -63
  289. xcoll/scattering_routines/geant4/collimasim/src/collimasim/pyCollimatorPass.py +0 -142
  290. xcoll/scattering_routines/geant4/collimasim/src/collimasim/xtrack_collimator.py +0 -475
  291. xcoll/scattering_routines/geant4/collimasim/src/collimasim.egg-info/PKG-INFO +0 -6
  292. xcoll/scattering_routines/geant4/collimasim/src/collimasim.egg-info/SOURCES.txt +0 -20
  293. xcoll/scattering_routines/geant4/collimasim/src/collimasim.egg-info/dependency_links.txt +0 -1
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  296. xcoll/scattering_routines/geant4/collimasim/tests/README.md +0 -25
  297. xcoll/scattering_routines/geant4/collimasim/tests/resources/CollDB_new_example.dat +0 -18
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  299. xcoll/scattering_routines/geant4/collimasim/tests/resources/CollDB_testing.dat +0 -15
  300. xcoll/scattering_routines/geant4/collimasim/tests/resources/CollDB_yaml_example.yaml +0 -110
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  303. xcoll/scattering_routines/geant4/collimasim/tests/resources/collonly_twiss_file_example.tfs +0 -54
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  305. xcoll/scattering_routines/geant4/collimasim/tests/resources/settings_black_absorber.gmad +0 -3
  306. xcoll/scattering_routines/geant4/collimasim/tests/resources/twiss_file_testing.tfs +0 -51
  307. xcoll/scattering_routines/geant4/collimasim/tests/test_pyat.py +0 -65
  308. xcoll/scattering_routines/geant4/collimasim/tests/test_pyat_passmethod.py +0 -59
  309. xcoll/scattering_routines/geant4/collimasim/tests/test_pyat_tracking.py +0 -102
  310. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack.py +0 -75
  311. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_angle.py +0 -74
  312. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_colldb_load.py +0 -84
  313. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_interaction.py +0 -159
  314. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_tilt.py +0 -80
  315. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_tracking.py +0 -97
  316. xcoll-0.3.3.dist-info/RECORD +0 -391
  317. {xcoll-0.3.3.dist-info → xcoll-0.3.5.dist-info}/LICENSE +0 -0
@@ -1,337 +0,0 @@
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- Miscellaneous
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- #############
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-
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- .. _macro_notes:
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-
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- General notes regarding convenience macros
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- ==========================================
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-
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- pybind11 provides a few convenience macros such as
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- :func:`PYBIND11_DECLARE_HOLDER_TYPE` and ``PYBIND11_OVERRIDE_*``. Since these
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- are "just" macros that are evaluated in the preprocessor (which has no concept
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- of types), they *will* get confused by commas in a template argument; for
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- example, consider:
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-
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- .. code-block:: cpp
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-
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- PYBIND11_OVERRIDE(MyReturnType<T1, T2>, Class<T3, T4>, func)
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-
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- The limitation of the C preprocessor interprets this as five arguments (with new
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- arguments beginning after each comma) rather than three. To get around this,
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- there are two alternatives: you can use a type alias, or you can wrap the type
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- using the ``PYBIND11_TYPE`` macro:
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-
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- .. code-block:: cpp
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-
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- // Version 1: using a type alias
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- using ReturnType = MyReturnType<T1, T2>;
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- using ClassType = Class<T3, T4>;
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- PYBIND11_OVERRIDE(ReturnType, ClassType, func);
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-
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- // Version 2: using the PYBIND11_TYPE macro:
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- PYBIND11_OVERRIDE(PYBIND11_TYPE(MyReturnType<T1, T2>),
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- PYBIND11_TYPE(Class<T3, T4>), func)
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-
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- The ``PYBIND11_MAKE_OPAQUE`` macro does *not* require the above workarounds.
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-
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- .. _gil:
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-
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- Global Interpreter Lock (GIL)
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- =============================
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-
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- When calling a C++ function from Python, the GIL is always held.
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- The classes :class:`gil_scoped_release` and :class:`gil_scoped_acquire` can be
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- used to acquire and release the global interpreter lock in the body of a C++
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- function call. In this way, long-running C++ code can be parallelized using
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- multiple Python threads. Taking :ref:`overriding_virtuals` as an example, this
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- could be realized as follows (important changes highlighted):
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-
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- .. code-block:: cpp
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- :emphasize-lines: 8,9,31,32
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-
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- class PyAnimal : public Animal {
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- public:
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- /* Inherit the constructors */
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- using Animal::Animal;
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-
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- /* Trampoline (need one for each virtual function) */
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- std::string go(int n_times) {
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- /* Acquire GIL before calling Python code */
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- py::gil_scoped_acquire acquire;
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-
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- PYBIND11_OVERRIDE_PURE(
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- std::string, /* Return type */
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- Animal, /* Parent class */
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- go, /* Name of function */
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- n_times /* Argument(s) */
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- );
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- }
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- };
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-
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- PYBIND11_MODULE(example, m) {
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- py::class_<Animal, PyAnimal> animal(m, "Animal");
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- animal
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- .def(py::init<>())
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- .def("go", &Animal::go);
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-
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- py::class_<Dog>(m, "Dog", animal)
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- .def(py::init<>());
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-
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- m.def("call_go", [](Animal *animal) -> std::string {
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- /* Release GIL before calling into (potentially long-running) C++ code */
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- py::gil_scoped_release release;
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- return call_go(animal);
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- });
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- }
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-
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- The ``call_go`` wrapper can also be simplified using the ``call_guard`` policy
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- (see :ref:`call_policies`) which yields the same result:
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-
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- .. code-block:: cpp
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-
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- m.def("call_go", &call_go, py::call_guard<py::gil_scoped_release>());
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-
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-
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- Binding sequence data types, iterators, the slicing protocol, etc.
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- ==================================================================
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-
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- Please refer to the supplemental example for details.
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-
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- .. seealso::
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-
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- The file :file:`tests/test_sequences_and_iterators.cpp` contains a
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- complete example that shows how to bind a sequence data type, including
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- length queries (``__len__``), iterators (``__iter__``), the slicing
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- protocol and other kinds of useful operations.
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-
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-
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- Partitioning code over multiple extension modules
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- =================================================
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-
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- It's straightforward to split binding code over multiple extension modules,
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- while referencing types that are declared elsewhere. Everything "just" works
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- without any special precautions. One exception to this rule occurs when
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- extending a type declared in another extension module. Recall the basic example
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- from Section :ref:`inheritance`.
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-
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- .. code-block:: cpp
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-
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- py::class_<Pet> pet(m, "Pet");
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- pet.def(py::init<const std::string &>())
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- .def_readwrite("name", &Pet::name);
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-
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- py::class_<Dog>(m, "Dog", pet /* <- specify parent */)
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- .def(py::init<const std::string &>())
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- .def("bark", &Dog::bark);
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-
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- Suppose now that ``Pet`` bindings are defined in a module named ``basic``,
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- whereas the ``Dog`` bindings are defined somewhere else. The challenge is of
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- course that the variable ``pet`` is not available anymore though it is needed
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- to indicate the inheritance relationship to the constructor of ``class_<Dog>``.
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- However, it can be acquired as follows:
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-
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- .. code-block:: cpp
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-
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- py::object pet = (py::object) py::module_::import("basic").attr("Pet");
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-
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- py::class_<Dog>(m, "Dog", pet)
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- .def(py::init<const std::string &>())
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- .def("bark", &Dog::bark);
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-
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- Alternatively, you can specify the base class as a template parameter option to
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- ``class_``, which performs an automated lookup of the corresponding Python
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- type. Like the above code, however, this also requires invoking the ``import``
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- function once to ensure that the pybind11 binding code of the module ``basic``
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- has been executed:
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-
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- .. code-block:: cpp
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-
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- py::module_::import("basic");
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-
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- py::class_<Dog, Pet>(m, "Dog")
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- .def(py::init<const std::string &>())
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- .def("bark", &Dog::bark);
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-
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- Naturally, both methods will fail when there are cyclic dependencies.
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-
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- Note that pybind11 code compiled with hidden-by-default symbol visibility (e.g.
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- via the command line flag ``-fvisibility=hidden`` on GCC/Clang), which is
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- required for proper pybind11 functionality, can interfere with the ability to
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- access types defined in another extension module. Working around this requires
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- manually exporting types that are accessed by multiple extension modules;
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- pybind11 provides a macro to do just this:
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-
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- .. code-block:: cpp
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-
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- class PYBIND11_EXPORT Dog : public Animal {
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- ...
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- };
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-
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- Note also that it is possible (although would rarely be required) to share arbitrary
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- C++ objects between extension modules at runtime. Internal library data is shared
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- between modules using capsule machinery [#f6]_ which can be also utilized for
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- storing, modifying and accessing user-defined data. Note that an extension module
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- will "see" other extensions' data if and only if they were built with the same
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- pybind11 version. Consider the following example:
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-
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- .. code-block:: cpp
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-
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- auto data = reinterpret_cast<MyData *>(py::get_shared_data("mydata"));
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- if (!data)
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- data = static_cast<MyData *>(py::set_shared_data("mydata", new MyData(42)));
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-
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- If the above snippet was used in several separately compiled extension modules,
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- the first one to be imported would create a ``MyData`` instance and associate
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- a ``"mydata"`` key with a pointer to it. Extensions that are imported later
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- would be then able to access the data behind the same pointer.
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-
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- .. [#f6] https://docs.python.org/3/extending/extending.html#using-capsules
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-
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- Module Destructors
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- ==================
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-
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- pybind11 does not provide an explicit mechanism to invoke cleanup code at
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- module destruction time. In rare cases where such functionality is required, it
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- is possible to emulate it using Python capsules or weak references with a
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- destruction callback.
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-
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- .. code-block:: cpp
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-
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- auto cleanup_callback = []() {
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- // perform cleanup here -- this function is called with the GIL held
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- };
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-
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- m.add_object("_cleanup", py::capsule(cleanup_callback));
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-
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- This approach has the potential downside that instances of classes exposed
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- within the module may still be alive when the cleanup callback is invoked
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- (whether this is acceptable will generally depend on the application).
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-
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- Alternatively, the capsule may also be stashed within a type object, which
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- ensures that it not called before all instances of that type have been
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- collected:
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-
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- .. code-block:: cpp
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-
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- auto cleanup_callback = []() { /* ... */ };
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- m.attr("BaseClass").attr("_cleanup") = py::capsule(cleanup_callback);
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-
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- Both approaches also expose a potentially dangerous ``_cleanup`` attribute in
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- Python, which may be undesirable from an API standpoint (a premature explicit
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- call from Python might lead to undefined behavior). Yet another approach that
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- avoids this issue involves weak reference with a cleanup callback:
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-
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- .. code-block:: cpp
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-
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- // Register a callback function that is invoked when the BaseClass object is collected
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- py::cpp_function cleanup_callback(
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- [](py::handle weakref) {
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- // perform cleanup here -- this function is called with the GIL held
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-
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- weakref.dec_ref(); // release weak reference
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- }
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- );
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-
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- // Create a weak reference with a cleanup callback and initially leak it
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- (void) py::weakref(m.attr("BaseClass"), cleanup_callback).release();
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-
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- .. note::
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-
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- PyPy does not garbage collect objects when the interpreter exits. An alternative
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- approach (which also works on CPython) is to use the :py:mod:`atexit` module [#f7]_,
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- for example:
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-
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- .. code-block:: cpp
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-
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- auto atexit = py::module_::import("atexit");
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- atexit.attr("register")(py::cpp_function([]() {
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- // perform cleanup here -- this function is called with the GIL held
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- }));
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-
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- .. [#f7] https://docs.python.org/3/library/atexit.html
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-
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-
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- Generating documentation using Sphinx
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- =====================================
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-
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- Sphinx [#f4]_ has the ability to inspect the signatures and documentation
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- strings in pybind11-based extension modules to automatically generate beautiful
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- documentation in a variety formats. The python_example repository [#f5]_ contains a
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- simple example repository which uses this approach.
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-
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- There are two potential gotchas when using this approach: first, make sure that
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- the resulting strings do not contain any :kbd:`TAB` characters, which break the
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- docstring parsing routines. You may want to use C++11 raw string literals,
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- which are convenient for multi-line comments. Conveniently, any excess
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- indentation will be automatically be removed by Sphinx. However, for this to
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- work, it is important that all lines are indented consistently, i.e.:
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-
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- .. code-block:: cpp
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-
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- // ok
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- m.def("foo", &foo, R"mydelimiter(
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- The foo function
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-
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- Parameters
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- ----------
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- )mydelimiter");
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-
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- // *not ok*
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- m.def("foo", &foo, R"mydelimiter(The foo function
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-
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- Parameters
283
- ----------
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- )mydelimiter");
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-
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- By default, pybind11 automatically generates and prepends a signature to the docstring of a function
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- registered with ``module_::def()`` and ``class_::def()``. Sometimes this
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- behavior is not desirable, because you want to provide your own signature or remove
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- the docstring completely to exclude the function from the Sphinx documentation.
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- The class ``options`` allows you to selectively suppress auto-generated signatures:
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-
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- .. code-block:: cpp
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-
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- PYBIND11_MODULE(example, m) {
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- py::options options;
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- options.disable_function_signatures();
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-
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- m.def("add", [](int a, int b) { return a + b; }, "A function which adds two numbers");
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- }
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-
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- Note that changes to the settings affect only function bindings created during the
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- lifetime of the ``options`` instance. When it goes out of scope at the end of the module's init function,
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- the default settings are restored to prevent unwanted side effects.
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-
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- .. [#f4] http://www.sphinx-doc.org
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- .. [#f5] http://github.com/pybind/python_example
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-
308
- .. _avoiding-cpp-types-in-docstrings:
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-
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- Avoiding C++ types in docstrings
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- ================================
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-
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- Docstrings are generated at the time of the declaration, e.g. when ``.def(...)`` is called.
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- At this point parameter and return types should be known to pybind11.
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- If a custom type is not exposed yet through a ``py::class_`` constructor or a custom type caster,
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- its C++ type name will be used instead to generate the signature in the docstring:
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-
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- .. code-block:: text
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-
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- | __init__(...)
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- | __init__(self: example.Foo, arg0: ns::Bar) -> None
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- ^^^^^^^
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-
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-
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- This limitation can be circumvented by ensuring that C++ classes are registered with pybind11
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- before they are used as a parameter or return type of a function:
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-
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- .. code-block:: cpp
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-
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- PYBIND11_MODULE(example, m) {
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-
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- auto pyFoo = py::class_<ns::Foo>(m, "Foo");
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- auto pyBar = py::class_<ns::Bar>(m, "Bar");
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-
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- pyFoo.def(py::init<const ns::Bar&>());
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- pyBar.def(py::init<const ns::Foo&>());
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- }
@@ -1,13 +0,0 @@
1
- Python C++ interface
2
- ####################
3
-
4
- pybind11 exposes Python types and functions using thin C++ wrappers, which
5
- makes it possible to conveniently call Python code from C++ without resorting
6
- to Python's C API.
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-
8
- .. toctree::
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- :maxdepth: 2
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-
11
- object
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- numpy
13
- utilities