wrfrun 0.1.9__py3-none-any.whl → 0.2.0__py3-none-any.whl

wrfrun/run.py

@@ -7,7 +7,7 @@ import threading
 from os.path import abspath, dirname
 from typing import Optional, Tuple, Union
 
-from .core import ExecConfigRecorder, WRFRUNConfig, WRFRunBasicError, WRFRunServer, WRFRunServerHandler, replay_config_generator, stop_server
+from .core import ExecConfigRecorder, WRFRUNConfig, init_wrfrun_config, WRFRunBasicError, WRFRunServer, WRFRunServerHandler, replay_config_generator, stop_server
 from .data import prepare_wps_input_data
 from .model import clear_model_logs, generate_domain_area
 from .scheduler import in_job_scheduler, prepare_scheduler_script
@@ -41,16 +41,29 @@ class WRFRun:
     _instance = None
     _initialized = False
 
-    def __init__(self, config_file: str, init_workspace=True, start_server=False, submit_job=False, prepare_wps_data=False, wps_data_area: Optional[Tuple[int, int, int, int]] = None):
+    def __init__(
+        self, config_file: str, init_workspace=True,
+        start_server=False, submit_job=False, prepare_wps_data=False,
+        wps_data_area: Optional[Tuple[int, int, int, int]] = None,
+        skip_domain_confirm=False
+    ):
         """
         WRFRun, a context class to achieve some goals before and after running WRF, like save a copy of config file, start and close WRFRunServer.
 
         :param config_file: ``wrfrun`` config file's path.
+        :type config_file: str
         :param init_workspace: If True, clean old files in workspace and re-create it.
+        :type init_workspace: bool
         :param start_server: Whether to start WRFRunServer, defaults to True.
+        :type start_server: bool
         :param submit_job: If commit this task to the PBS system, defaults to True.
+        :type submit_job: bool
         :param prepare_wps_data: If True, download input datas for WPS first.
+        :type prepare_wps_data: bool
         :param wps_data_area: If ``prepare_wps_data==True``, you need to give the area range of input data so download function can download data from ERA5.
+        :type wps_data_area: tuple
+        :param skip_domain_confirm: If ``True``, skip domain confirm.
+        :type skip_domain_confirm: bool
         :return:
         """
         if self._initialized:
@@ -67,13 +80,14 @@ class WRFRun:
         self._init_workspace = init_workspace
         self._prepare_wps_data = prepare_wps_data
         self._wps_data_area = wps_data_area
+        self._skip_domain_confirm = skip_domain_confirm
         self._entry_file_path = abspath(sys.argv[0])
         self._entry_file_dir_path = dirname(self._entry_file_path)
         self._replay_configs = None
 
         # make sure we can read the config file, because sometimes the user may run the Python script in a different path.
         abs_config_path = f"{self._entry_file_dir_path}/{config_file}"
-        WRFRUNConfig.load_wrfrun_config(abs_config_path)
+        init_wrfrun_config(abs_config_path)
 
         self._record_output_path = None
         self._record_include_data = False
@@ -101,7 +115,8 @@ class WRFRun:
                 prepare_workspace()
 
             # ask user before commit the task
-            confirm_model_area()
+            if not self._skip_domain_confirm:
+                confirm_model_area()
 
             prepare_scheduler_script(self._entry_file_path)
 
@@ -113,7 +128,8 @@ class WRFRun:
             if self._init_workspace:
                 prepare_workspace()
 
-            confirm_model_area()
+            if not self._skip_domain_confirm:
+                confirm_model_area()
 
         # save a copy of config to the output path
         WRFRUNConfig.save_wrfrun_config(f"{WRFRUNConfig.WRFRUN_OUTPUT_PATH}/config.toml")

wrfrun/scheduler/lsf.py

@@ -10,7 +10,7 @@ Scheduler interface for LSF system.
     lsf_generate_settings
 """
 
-from wrfrun.core import WRFRUNConfig
+from wrfrun.core import get_wrfrun_config
 from wrfrun.res import SCHEDULER_LSF_TEMPLATE
 from .utils import get_core_num
 
@@ -22,6 +22,8 @@ def lsf_generate_settings(scheduler_config: dict) -> str:
     :return: Generated settings.
     :rtype: str
     """
+    WRFRUNConfig = get_wrfrun_config()
+
     # get log path and job scheduler config
     log_path = WRFRUNConfig.get_log_path()
 

wrfrun/scheduler/pbs.py

@@ -10,7 +10,7 @@ Scheduler interface for PBS system.
     pbs_generate_settings
 """
 
-from wrfrun.core import WRFRUNConfig
+from wrfrun.core import get_wrfrun_config
 from wrfrun.res import SCHEDULER_PBS_TEMPLATE
 from .utils import get_core_num
 
@@ -22,6 +22,8 @@ def pbs_generate_settings(scheduler_config: dict) -> str:
     :return: Generated settings.
     :rtype: str
     """
+    WRFRUNConfig = get_wrfrun_config()
+
     # get log path and job scheduler config
     log_path = WRFRUNConfig.get_log_path()
 

wrfrun/scheduler/script.py

@@ -1,6 +1,6 @@
-from os.path import exists, abspath, dirname
+from os.path import abspath, dirname, exists
 
-from wrfrun import WRFRUNConfig
+from wrfrun import get_wrfrun_config
 from wrfrun.res import RUN_SH_TEMPLATE
 from wrfrun.utils import logger
 from .lsf import lsf_generate_settings
@@ -15,6 +15,8 @@ def prepare_scheduler_script(main_file_path: str):
     :param main_file_path: Path of the main entry file.
     :type main_file_path: str
     """
+    WRFRUNConfig = get_wrfrun_config()
+
     # check main file path
     if not exists(main_file_path):
         logger.error(f"Wrong path of main entry file: {main_file_path}")

wrfrun/scheduler/slurm.py

@@ -10,7 +10,7 @@ Scheduler interface for Slurm system.
     slurm_generate_settings
 """
 
-from wrfrun.core import WRFRUNConfig
+from wrfrun.core import get_wrfrun_config
 from wrfrun.res import SCHEDULER_SLURM_TEMPLATE
 from .utils import get_core_num
 
@@ -22,6 +22,8 @@ def slurm_generate_settings(scheduler_config: dict) -> str:
     :return: Generated settings.
     :rtype: str
     """
+    WRFRUNConfig = get_wrfrun_config()
+
     # get log path and job scheduler config
     log_path = WRFRUNConfig.get_log_path()
 

wrfrun/scheduler/utils.py

@@ -1,4 +1,4 @@
-from wrfrun import WRFRUNConfig
+from wrfrun.core import get_wrfrun_config
 
 
 def get_core_num() -> int:
@@ -8,7 +8,7 @@ def get_core_num() -> int:
     :return: Core number.
     :rtype: int
     """
-    return WRFRUNConfig["core_num"]
+    return get_wrfrun_config()["core_num"]
 
 
 __all__ = ["get_core_num"]

wrfrun/workspace/core.py

@@ -13,9 +13,9 @@ Core functions to prepare ``wrfrun`` workspace.
 from os.path import exists
 from shutil import rmtree
 
-from wrfrun import WRFRUNConfig
+from wrfrun.core import get_wrfrun_config
 from wrfrun.utils import check_path, logger
-from .wrf import prepare_wrf_workspace, check_wrf_workspace
+from .wrf import check_wrf_workspace, prepare_wrf_workspace
 
 
 def prepare_workspace():
@@ -34,6 +34,7 @@ def prepare_workspace():
 
     1. :doc:`WPS/WRF model </api/workspace.wrf>`
     """
+    WRFRUNConfig = get_wrfrun_config()
     logger.info(f"Initialize main workspace.")
 
     wrfrun_temp_path = WRFRUNConfig.parse_resource_uri(WRFRUNConfig.WRFRUN_TEMP_PATH)
@@ -66,6 +67,7 @@ def check_workspace() -> bool:
     :return: ``True`` if workspace exists, ``False`` otherwise.
     :rtype: bool
     """
+    WRFRUNConfig = get_wrfrun_config()
 
     wrfrun_temp_path = WRFRUNConfig.parse_resource_uri(WRFRUNConfig.WRFRUN_TEMP_PATH)
     workspace_path = WRFRUNConfig.parse_resource_uri(WRFRUNConfig.WRFRUN_WORKSPACE_ROOT)

wrfrun/workspace/wrf.py

@@ -7,20 +7,60 @@ Functions to prepare workspace for WPS/WRF model.
 .. autosummary::
     :toctree: generated/
 
+    get_wrf_workspace_path
     prepare_wrf_workspace
     check_wrf_workspace
 """
 
 from os import listdir, makedirs, symlink
 from os.path import exists
+from typing import Literal
 
-from wrfrun.core import WRFRUNConfig
-from wrfrun.utils import logger, check_path
+from wrfrun.core import WRFRunConfig, get_wrfrun_config, set_register_func
+from wrfrun.utils import check_path, logger
 
+WORKSPACE_MODEL_WPS = ""
+WORKSPACE_MODEL_WRF = ""
+WORKSPACE_MODEL_WRFDA = ""
 
-WORKSPACE_MODEL_WPS = f"{WRFRUNConfig.WRFRUN_WORKSPACE_MODEL}/WPS"
-WORKSPACE_MODEL_WRF = f"{WRFRUNConfig.WRFRUN_WORKSPACE_MODEL}/WRF"
-WORKSPACE_MODEL_WRFDA = f"{WRFRUNConfig.WRFRUN_WORKSPACE_MODEL}/WRFDA"
+
+def _register_wrf_workspace_uri(wrfrun_config: WRFRunConfig):
+    """
+    This function doesn't register any URI.
+
+    This is a hook to initializes some global strings.
+
+    :param wrfrun_config: ``WRFRunConfig`` instance.
+    :type wrfrun_config: WRFRunConfig
+    """
+    global WORKSPACE_MODEL_WPS, WORKSPACE_MODEL_WRF, WORKSPACE_MODEL_WRFDA
+
+    WORKSPACE_MODEL_WPS = f"{wrfrun_config.WRFRUN_WORKSPACE_MODEL}/WPS"
+    WORKSPACE_MODEL_WRF = f"{wrfrun_config.WRFRUN_WORKSPACE_MODEL}/WRF"
+    WORKSPACE_MODEL_WRFDA = f"{wrfrun_config.WRFRUN_WORKSPACE_MODEL}/WRFDA"
+
+
+set_register_func(_register_wrf_workspace_uri)
+
+
+def get_wrf_workspace_path(name: Literal["wps", "wrf", "wrfda"]) -> str:
+    """
+    Get workspace path of WRF model.
+
+    :param name: Model part name.
+    :type name: str
+    :return: Workspace path.
+    :rtype: str
+    """
+    match name:
+        case "wps":
+            return WORKSPACE_MODEL_WPS
+
+        case "wrf":
+            return WORKSPACE_MODEL_WRF
+
+        case "wrfda":
+            return WORKSPACE_MODEL_WRFDA
 
 
 def prepare_wrf_workspace(model_config: dict):
@@ -39,6 +79,8 @@ def prepare_wrf_workspace(model_config: dict):
     """
     logger.info(f"Initialize workspace for WPS/WRF.")
 
+    WRFRUNConfig = get_wrfrun_config()
+
     wps_path = model_config["wps_path"]
     wrf_path = model_config["wrf_path"]
     wrfda_path = model_config["wrfda_path"]
@@ -97,6 +139,8 @@ def check_wrf_workspace(model_config: dict) -> bool:
     :return: ``True`` if WPS/WRF workspace exists, ``False`` otherwise.
     :rtype: bool
     """
+    WRFRUNConfig = get_wrfrun_config()
+
     wps_path = model_config["wps_path"]
     wrf_path = model_config["wrf_path"]
     wrfda_path = model_config["wrfda_path"]
@@ -118,4 +162,4 @@ def check_wrf_workspace(model_config: dict) -> bool:
     return flag
 
 
-__all__ = ["prepare_wrf_workspace", "WORKSPACE_MODEL_WRF", "WORKSPACE_MODEL_WPS", "WORKSPACE_MODEL_WRFDA", "check_wrf_workspace"]
+__all__ = ["get_wrf_workspace_path", "prepare_wrf_workspace", "check_wrf_workspace"]

{wrfrun-0.1.9.dist-info → wrfrun-0.2.0.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: wrfrun
-Version: 0.1.9
+Version: 0.2.0
 Summary: wrfrun is a comprehensive toolkit for managing and using WRF
 Keywords: WRF
 Author-Email: Syize <syizeliu@gmail.com>

{wrfrun-0.1.9.dist-info → wrfrun-0.2.0.dist-info}/RECORD

@@ -1,43 +1,43 @@
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-wrfrun-0.1.9.dist-info/entry_points.txt,sha256=G3358n6wW1qZF3hSH9umxrWHJewN-6N1BUloacN2tks,50
+wrfrun-0.2.0.dist-info/METADATA,sha256=v05u5wToeTsctm_vmFeK8z1I29iWTjauvJmbTOkZ9lI,2932
+wrfrun-0.2.0.dist-info/WHEEL,sha256=5J4neoE7k6LMgx4Fz1FHgBiO3YevhJGtNQ3muDrdLQM,75
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 wrfrun/__init__.py,sha256=l2zGk2qDWa3EXIlwvzqBYZHOU9273TN75Rmvx_7PAYM,58
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-wrfrun/run.py,sha256=aYRQ-YqjIt5g4MQEnphmZIwanT9TBlYCddcyXxtgD_s,8918
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 wrfrun/utils.py,sha256=BdGP5u2Y2e3tqU0dawfHsTeqZ0q4Ic4MCGR8RU4FJ90,8388
 wrfrun/core/__init__.py,sha256=zsitfcmbO_Qf_Uh0FzZ4rceZAo3WEYev32jSjgRjtkw,1325
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 wrfrun/core/replay.py,sha256=jZWN68IgUroxuCzg7EO0FXxe2zwokxJnquu4t81hp7Y,4782
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 wrfrun/extension/__init__.py,sha256=YDYCS0KD3e-uLvf1K08ktNfP2sUSKpbgkHrvXj21EPQ,913
-wrfrun/extension/utils.py,sha256=mmcyqxOEVGSBu8t8ukB2SeRp9X_PLR0kWvfptBC_WWo,2458
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 wrfrun/extension/goos_sst/__init__.py,sha256=QsVheVVL5K0_k-eg8-xe2MLAJ845iivXzGHbp2qARh4,2101
 wrfrun/extension/goos_sst/core.py,sha256=_s53vq0nAwnwWxExD8-73p5seCWLO1XVzRh5T8JofAw,3870
 wrfrun/extension/goos_sst/utils.py,sha256=bomXbhpOuNOYm2rL1SiOeSxVbSaKWfVxX51KoODgBn0,3469
 wrfrun/extension/goos_sst/res/__init__.py,sha256=-Ey6iFHzQYZNOGhVrSkMjOwiXVgt3P6eaumq7pOmh_E,511
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 wrfrun/extension/littler/__init__.py,sha256=bLiGIpB_FpTyio44CjIzwwcahyFWxGW-gECfBOIG9Y8,2032
-wrfrun/extension/littler/core.py,sha256=0Si4phAUiCwgjEQnDfWKSOvtnyitWYmrDWkB6_2VjUg,34173
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 wrfrun/model/__init__.py,sha256=PYA6ZUwL4u3heRIMX_qkLvAA6jDrY4kugD8rCvnl-2Y,803
 wrfrun/model/base.py,sha256=WnVNu12ICJgThfZR7kK6_XLCQWVYFsHrdyAz8wl_YRc,218
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-wrfrun/model/utils.py,sha256=5_ffMJCPi_n3-Mgaci9F2eMk2fY7_UrcjmK0JSsZZr0,1206
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 wrfrun/model/wrf/__init__.py,sha256=KJij1JMTcj3i5e2LcJJJudA99LrsJIVHeMj9ktT9Y_4,1752
-wrfrun/model/wrf/core.py,sha256=Ykw6ElY3mUelWOThDFT--ChnwY7zgcbyooLuJNhGqV4,35627
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 wrfrun/model/wrf/exec_wrap.py,sha256=REOtNLCc6IcM2yaaSXoXGgXFA-xjMHmoTiA9B3ZezEA,4418
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-wrfrun/model/wrf/namelist.py,sha256=ksxHlh-LtxDBF73cCe8J0wpyGrSvM1dBgPgwK2XseGo,16918
+wrfrun/model/wrf/geodata.py,sha256=2-B7hkMfB-MmSy3mMHbKqTYAlpcmSNVp26XW_VkPWu4,9784
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 wrfrun/model/wrf/scheme.py,sha256=8y85Dbu-GajwjHr3Spw8_tN21xAloD-SnmxJd11nXKE,11254
-wrfrun/model/wrf/utils.py,sha256=DuKghfqBT77p_beDKJ3EyyPMuRmBJCgCElvs3YheWak,3709
-wrfrun/model/wrf/vtable.py,sha256=1el_TctQfPVTYnZn0nJNgfDvVXy6q5ZzVIyUgWRfFUs,2478
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 wrfrun/plot/__init__.py,sha256=9Kn0IgkX10sHEqHJwk7mZV-dP14XMNcvXN8znO89FIw,19
 wrfrun/plot/wps.py,sha256=pvkxbh5760AAM4KaPteMzhFniZZFtkYF31xhzSBa7lo,5552
-wrfrun/res/__init__.py,sha256=cIjX9Was6nhms-aBLUY0V1393of-LzoSRcWcD_HGgn0,1437
+wrfrun/res/__init__.py,sha256=18wHJhgDd0hwITHe79xBNwgM4A3yEUJOz2ubcYKeBZI,1669
 wrfrun/res/run.template.sh,sha256=k-r4lOOarscmSdiBXGHPnv3oeiRe-qW-VhOBia27ZGU,101
-wrfrun/res/config/config.template.toml,sha256=DjtFjy2sL_P6w63XfLDkmDWhWKyo6qrlwBy69cnbvXA,1378
+wrfrun/res/config/config.template.toml,sha256=BTDGDm8aXqXbZM-gpXdGXNZEFFIWmeXd5pLdasWuT38,1593
 wrfrun/res/config/wrf.template.toml,sha256=qQS3OHAXBMaKWgj2qT7jLeDu6tyngPgin7Q-XcE3ZkQ,3189
 wrfrun/res/extension/plotgrids.ncl,sha256=B0mvH1H1j_w7EEana9HmU1XJZtG0w9IccQ54zXpbQG0,7546
 wrfrun/res/namelist/namelist.input.da_wrfvar.template,sha256=Cwc-XPu_spJeQte4duWrulPBOLRMEBtn0mIn0pgMmKY,4912
@@ -51,12 +51,12 @@ wrfrun/res/scheduler/pbs.template,sha256=kP4pGMAq2uz0OZUAWii7dO4ECLC924c8SnciFeB
 wrfrun/res/scheduler/slurm.template,sha256=sQNjkKzOftipDD4kYmzhZkh8fg0M9uaQsdLjDakCVwA,336
 wrfrun/scheduler/__init__.py,sha256=pOqnCAl2-_yC7zPS2VQL5RMltQN4zc0koYS_MESKtHo,1130
 wrfrun/scheduler/env.py,sha256=N_K5yZFRXMEXvW3yjSideEDPWZzoWpbRhFS9LJoZ3R8,1262
-wrfrun/scheduler/lsf.py,sha256=E_sKUk4_RZMBSkHctzDi2sEAy8UrteZvgpbuU2zeSvo,1158
-wrfrun/scheduler/pbs.py,sha256=fqGqoIWG4lh2bT_NqxPxL3XIdPo8keWG2MFqZmOMKpI,1174
-wrfrun/scheduler/script.py,sha256=si2pzrKCOutICcke4t1c5kmCnVlTS9PZJF5MJTp3YTk,2403
-wrfrun/scheduler/slurm.py,sha256=Y3a4MAt5omDgVUtONaL2ajV609HbOZl2opjIGkHUa7g,1196
-wrfrun/scheduler/utils.py,sha256=5BGPEB-oMn4ifo3XZOkDOwAvjWXi69UHLR5HMabwUAM,206
+wrfrun/scheduler/lsf.py,sha256=ajpYnWWryEMMguEBz5H0CONaJmM7AhDV8SOwD1DKkdI,1203
+wrfrun/scheduler/pbs.py,sha256=A0nAOsgU8xzrPZZYrmQI00wUj5P8E_QY_LhDKFvua-Q,1219
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