waveorder 3.0.0a2__py3-none-any.whl → 3.0.0a3__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (22) hide show
  1. waveorder/_version.py +2 -2
  2. waveorder/assets/waveorder_plugin_logo.png +0 -0
  3. waveorder/cli/apply_inverse_models.py +14 -10
  4. waveorder/cli/apply_inverse_transfer_function.py +3 -3
  5. waveorder/cli/compute_transfer_function.py +9 -7
  6. waveorder/cli/printing.py +6 -2
  7. waveorder/cli/settings.py +51 -51
  8. waveorder/cli/utils.py +1 -1
  9. waveorder/focus.py +73 -9
  10. waveorder/io/utils.py +5 -3
  11. waveorder/models/phase_thick_3d.py +103 -4
  12. waveorder/plugin/gui.py +198 -799
  13. waveorder/plugin/gui.ui +0 -795
  14. waveorder/plugin/main_widget.py +6 -572
  15. waveorder/plugin/tab_recon.py +196 -96
  16. {waveorder-3.0.0a2.dist-info → waveorder-3.0.0a3.dist-info}/METADATA +18 -3
  17. {waveorder-3.0.0a2.dist-info → waveorder-3.0.0a3.dist-info}/RECORD +21 -22
  18. {waveorder-3.0.0a2.dist-info → waveorder-3.0.0a3.dist-info}/WHEEL +1 -1
  19. {waveorder-3.0.0a2.dist-info → waveorder-3.0.0a3.dist-info}/licenses/LICENSE +12 -0
  20. waveorder/acq/acquisition_workers.py +0 -650
  21. {waveorder-3.0.0a2.dist-info → waveorder-3.0.0a3.dist-info}/entry_points.txt +0 -0
  22. {waveorder-3.0.0a2.dist-info → waveorder-3.0.0a3.dist-info}/top_level.txt +0 -0
waveorder/plugin/gui.ui CHANGED
@@ -969,773 +969,6 @@
969
969
  </item>
970
970
  </layout>
971
971
  </widget>
972
- <widget class="QWidget" name="Acquisition">
973
- <property name="sizePolicy">
974
- <sizepolicy hsizetype="Preferred" vsizetype="Preferred">
975
- <horstretch>0</horstretch>
976
- <verstretch>0</verstretch>
977
- </sizepolicy>
978
- </property>
979
- <property name="minimumSize">
980
- <size>
981
- <width>0</width>
982
- <height>0</height>
983
- </size>
984
- </property>
985
- <property name="maximumSize">
986
- <size>
987
- <width>16777215</width>
988
- <height>16777215</height>
989
- </size>
990
- </property>
991
- <attribute name="title">
992
- <string>Acquisition / Reconstruction</string>
993
- </attribute>
994
- <layout class="QGridLayout" name="gridLayout_6">
995
- <property name="sizeConstraint">
996
- <enum>QLayout::SetDefaultConstraint</enum>
997
- </property>
998
- <property name="leftMargin">
999
- <number>4</number>
1000
- </property>
1001
- <property name="topMargin">
1002
- <number>4</number>
1003
- </property>
1004
- <property name="rightMargin">
1005
- <number>4</number>
1006
- </property>
1007
- <property name="bottomMargin">
1008
- <number>4</number>
1009
- </property>
1010
- <property name="spacing">
1011
- <number>0</number>
1012
- </property>
1013
- <item row="4" column="0">
1014
- <widget class="QScrollArea" name="scrollArea_4">
1015
- <property name="sizePolicy">
1016
- <sizepolicy hsizetype="Expanding" vsizetype="Preferred">
1017
- <horstretch>0</horstretch>
1018
- <verstretch>0</verstretch>
1019
- </sizepolicy>
1020
- </property>
1021
- <property name="widgetResizable">
1022
- <bool>true</bool>
1023
- </property>
1024
- <widget class="QWidget" name="scrollAreaWidgetContents_4">
1025
- <property name="geometry">
1026
- <rect>
1027
- <x>0</x>
1028
- <y>0</y>
1029
- <width>614</width>
1030
- <height>990</height>
1031
- </rect>
1032
- </property>
1033
- <property name="sizePolicy">
1034
- <sizepolicy hsizetype="Preferred" vsizetype="Preferred">
1035
- <horstretch>0</horstretch>
1036
- <verstretch>0</verstretch>
1037
- </sizepolicy>
1038
- </property>
1039
- <layout class="QGridLayout" name="gridLayout_15">
1040
- <property name="verticalSpacing">
1041
- <number>20</number>
1042
- </property>
1043
- <item row="3" column="0">
1044
- <widget class="QGroupBox" name="phase">
1045
- <property name="sizePolicy">
1046
- <sizepolicy hsizetype="Expanding" vsizetype="Preferred">
1047
- <horstretch>0</horstretch>
1048
- <verstretch>0</verstretch>
1049
- </sizepolicy>
1050
- </property>
1051
- <property name="font">
1052
- <font>
1053
- <italic>false</italic>
1054
- <bold>true</bold>
1055
- </font>
1056
- </property>
1057
- <property name="title">
1058
- <string>Phase Reconstruction Settings</string>
1059
- </property>
1060
- <layout class="QGridLayout" name="gridLayout_23">
1061
- <property name="topMargin">
1062
- <number>12</number>
1063
- </property>
1064
- <property name="verticalSpacing">
1065
- <number>6</number>
1066
- </property>
1067
- <item row="1" column="0">
1068
- <widget class="QLabel" name="label_phase_regularizer">
1069
- <property name="text">
1070
- <string>Regularizer</string>
1071
- </property>
1072
- </widget>
1073
- </item>
1074
- <item row="3" column="0">
1075
- <widget class="QLabel" name="label_phase_rho">
1076
- <property name="text">
1077
- <string>Rho</string>
1078
- </property>
1079
- </widget>
1080
- </item>
1081
- <item row="2" column="1">
1082
- <widget class="QLineEdit" name="le_phase_strength">
1083
- <property name="text">
1084
- <string>.0001</string>
1085
- </property>
1086
- </widget>
1087
- </item>
1088
- <item row="4" column="1">
1089
- <widget class="QLineEdit" name="le_itr">
1090
- <property name="text">
1091
- <string>50</string>
1092
- </property>
1093
- <property name="placeholderText">
1094
- <string>TV Only</string>
1095
- </property>
1096
- </widget>
1097
- </item>
1098
- <item row="1" column="1">
1099
- <widget class="QComboBox" name="cb_phase_denoiser">
1100
- <item>
1101
- <property name="text">
1102
- <string>Tikhonov</string>
1103
- </property>
1104
- </item>
1105
- <item>
1106
- <property name="text">
1107
- <string>TV</string>
1108
- </property>
1109
- </item>
1110
- </widget>
1111
- </item>
1112
- <item row="3" column="1">
1113
- <widget class="QLineEdit" name="le_rho">
1114
- <property name="text">
1115
- <string>0.001</string>
1116
- </property>
1117
- <property name="placeholderText">
1118
- <string>TV Only</string>
1119
- </property>
1120
- </widget>
1121
- </item>
1122
- <item row="4" column="0">
1123
- <widget class="QLabel" name="label_itr">
1124
- <property name="text">
1125
- <string>Iterations</string>
1126
- </property>
1127
- </widget>
1128
- </item>
1129
- <item row="2" column="0">
1130
- <widget class="QLabel" name="label_phase_strength">
1131
- <property name="text">
1132
- <string>Strength</string>
1133
- </property>
1134
- </widget>
1135
- </item>
1136
- <item row="0" column="0">
1137
- <widget class="QLabel" name="label_pad_z">
1138
- <property name="sizePolicy">
1139
- <sizepolicy hsizetype="Fixed" vsizetype="Preferred">
1140
- <horstretch>0</horstretch>
1141
- <verstretch>0</verstretch>
1142
- </sizepolicy>
1143
- </property>
1144
- <property name="text">
1145
- <string>Z Padding</string>
1146
- </property>
1147
- </widget>
1148
- </item>
1149
- <item row="0" column="1">
1150
- <widget class="QLineEdit" name="le_pad_z">
1151
- <property name="sizePolicy">
1152
- <sizepolicy hsizetype="Preferred" vsizetype="Fixed">
1153
- <horstretch>0</horstretch>
1154
- <verstretch>0</verstretch>
1155
- </sizepolicy>
1156
- </property>
1157
- <property name="text">
1158
- <string>0</string>
1159
- </property>
1160
- </widget>
1161
- </item>
1162
- </layout>
1163
- </widget>
1164
- </item>
1165
- <item row="1" column="0">
1166
- <widget class="QGroupBox" name="acq_settings">
1167
- <property name="sizePolicy">
1168
- <sizepolicy hsizetype="Preferred" vsizetype="Fixed">
1169
- <horstretch>0</horstretch>
1170
- <verstretch>0</verstretch>
1171
- </sizepolicy>
1172
- </property>
1173
- <property name="font">
1174
- <font>
1175
- <italic>false</italic>
1176
- <bold>true</bold>
1177
- </font>
1178
- </property>
1179
- <property name="focusPolicy">
1180
- <enum>Qt::TabFocus</enum>
1181
- </property>
1182
- <property name="title">
1183
- <string>Acquisition Settings</string>
1184
- </property>
1185
- <property name="flat">
1186
- <bool>false</bool>
1187
- </property>
1188
- <layout class="QGridLayout" name="gridLayout_8">
1189
- <property name="topMargin">
1190
- <number>12</number>
1191
- </property>
1192
- <property name="verticalSpacing">
1193
- <number>6</number>
1194
- </property>
1195
- <item row="3" column="1">
1196
- <widget class="QComboBox" name="cb_acq_mode">
1197
- <property name="font">
1198
- <font>
1199
- <italic>false</italic>
1200
- <bold>false</bold>
1201
- </font>
1202
- </property>
1203
- <property name="focusPolicy">
1204
- <enum>Qt::StrongFocus</enum>
1205
- </property>
1206
- <item>
1207
- <property name="text">
1208
- <string>2D</string>
1209
- </property>
1210
- </item>
1211
- <item>
1212
- <property name="text">
1213
- <string>3D</string>
1214
- </property>
1215
- </item>
1216
- </widget>
1217
- </item>
1218
- <item row="1" column="0">
1219
- <widget class="QLabel" name="label_zstart">
1220
- <property name="font">
1221
- <font>
1222
- <italic>false</italic>
1223
- <bold>false</bold>
1224
- </font>
1225
- </property>
1226
- <property name="text">
1227
- <string>Z Start (um)</string>
1228
- </property>
1229
- </widget>
1230
- </item>
1231
- <item row="3" column="0">
1232
- <widget class="QLabel" name="label_acq_mode">
1233
- <property name="font">
1234
- <font>
1235
- <italic>false</italic>
1236
- <bold>false</bold>
1237
- </font>
1238
- </property>
1239
- <property name="text">
1240
- <string>Acquisition Mode</string>
1241
- </property>
1242
- </widget>
1243
- </item>
1244
- <item row="2" column="2">
1245
- <widget class="QLineEdit" name="le_zstep"/>
1246
- </item>
1247
- <item row="2" column="1">
1248
- <widget class="QLineEdit" name="le_zend"/>
1249
- </item>
1250
- <item row="1" column="2">
1251
- <widget class="QLabel" name="label_zstep">
1252
- <property name="font">
1253
- <font>
1254
- <italic>false</italic>
1255
- <bold>false</bold>
1256
- </font>
1257
- </property>
1258
- <property name="text">
1259
- <string>Z Step (um)</string>
1260
- </property>
1261
- </widget>
1262
- </item>
1263
- <item row="1" column="1">
1264
- <widget class="QLabel" name="label_zend">
1265
- <property name="font">
1266
- <font>
1267
- <italic>false</italic>
1268
- <bold>false</bold>
1269
- </font>
1270
- </property>
1271
- <property name="text">
1272
- <string>Z End (um)</string>
1273
- </property>
1274
- </widget>
1275
- </item>
1276
- <item row="4" column="1">
1277
- <widget class="QComboBox" name="cb_acq_channel">
1278
- <property name="currentText">
1279
- <string/>
1280
- </property>
1281
- </widget>
1282
- </item>
1283
- <item row="4" column="0">
1284
- <widget class="QLabel" name="labe_acq_channel">
1285
- <property name="text">
1286
- <string>BF Channel</string>
1287
- </property>
1288
- </widget>
1289
- </item>
1290
- <item row="2" column="0">
1291
- <widget class="QLineEdit" name="le_zstart"/>
1292
- </item>
1293
- </layout>
1294
- </widget>
1295
- </item>
1296
- <item row="2" column="0">
1297
- <widget class="QGroupBox" name="ReconSettings">
1298
- <property name="sizePolicy">
1299
- <sizepolicy hsizetype="Preferred" vsizetype="Fixed">
1300
- <horstretch>0</horstretch>
1301
- <verstretch>0</verstretch>
1302
- </sizepolicy>
1303
- </property>
1304
- <property name="font">
1305
- <font>
1306
- <italic>false</italic>
1307
- <bold>true</bold>
1308
- </font>
1309
- </property>
1310
- <property name="title">
1311
- <string>General Reconstruction Settings</string>
1312
- </property>
1313
- <property name="alignment">
1314
- <set>Qt::AlignLeading|Qt::AlignLeft|Qt::AlignVCenter</set>
1315
- </property>
1316
- <layout class="QGridLayout" name="gridLayout_9">
1317
- <property name="topMargin">
1318
- <number>12</number>
1319
- </property>
1320
- <property name="verticalSpacing">
1321
- <number>6</number>
1322
- </property>
1323
- <item row="10" column="0">
1324
- <widget class="QLabel" name="label_mag">
1325
- <property name="sizePolicy">
1326
- <sizepolicy hsizetype="Fixed" vsizetype="Preferred">
1327
- <horstretch>0</horstretch>
1328
- <verstretch>0</verstretch>
1329
- </sizepolicy>
1330
- </property>
1331
- <property name="text">
1332
- <string>Magnification</string>
1333
- </property>
1334
- </widget>
1335
- </item>
1336
- <item row="1" column="1">
1337
- <widget class="QLineEdit" name="le_data_save_name">
1338
- <property name="sizePolicy">
1339
- <sizepolicy hsizetype="Preferred" vsizetype="Fixed">
1340
- <horstretch>0</horstretch>
1341
- <verstretch>0</verstretch>
1342
- </sizepolicy>
1343
- </property>
1344
- <property name="text">
1345
- <string/>
1346
- </property>
1347
- <property name="placeholderText">
1348
- <string>Optional</string>
1349
- </property>
1350
- </widget>
1351
- </item>
1352
- <item row="2" column="1">
1353
- <widget class="QComboBox" name="cb_bg_method">
1354
- <property name="focusPolicy">
1355
- <enum>Qt::StrongFocus</enum>
1356
- </property>
1357
- <item>
1358
- <property name="text">
1359
- <string>None</string>
1360
- </property>
1361
- </item>
1362
- <item>
1363
- <property name="text">
1364
- <string>Global</string>
1365
- </property>
1366
- </item>
1367
- <item>
1368
- <property name="text">
1369
- <string>Local Fit</string>
1370
- </property>
1371
- </item>
1372
- </widget>
1373
- </item>
1374
- <item row="12" column="0">
1375
- <widget class="QLabel" name="label_flip_orientation">
1376
- <property name="text">
1377
- <string>Flip Orientation</string>
1378
- </property>
1379
- </widget>
1380
- </item>
1381
- <item row="10" column="1">
1382
- <widget class="QLineEdit" name="le_mag">
1383
- <property name="sizePolicy">
1384
- <sizepolicy hsizetype="Preferred" vsizetype="Fixed">
1385
- <horstretch>0</horstretch>
1386
- <verstretch>0</verstretch>
1387
- </sizepolicy>
1388
- </property>
1389
- </widget>
1390
- </item>
1391
- <item row="7" column="1">
1392
- <widget class="QLineEdit" name="le_cond_na">
1393
- <property name="sizePolicy">
1394
- <sizepolicy hsizetype="Preferred" vsizetype="Fixed">
1395
- <horstretch>0</horstretch>
1396
- <verstretch>0</verstretch>
1397
- </sizepolicy>
1398
- </property>
1399
- </widget>
1400
- </item>
1401
- <item row="1" column="0">
1402
- <widget class="QLabel" name="label_data_save_name">
1403
- <property name="text">
1404
- <string>Save Name</string>
1405
- </property>
1406
- </widget>
1407
- </item>
1408
- <item row="4" column="0">
1409
- <widget class="QLabel" name="label_gpu_id">
1410
- <property name="text">
1411
- <string>GPU ID</string>
1412
- </property>
1413
- <property name="alignment">
1414
- <set>Qt::AlignLeading|Qt::AlignLeft|Qt::AlignVCenter</set>
1415
- </property>
1416
- </widget>
1417
- </item>
1418
- <item row="2" column="0">
1419
- <widget class="QLabel" name="label_bg_method">
1420
- <property name="text">
1421
- <string>BG Correction</string>
1422
- </property>
1423
- </widget>
1424
- </item>
1425
- <item row="5" column="0">
1426
- <widget class="QLabel" name="label_recon_wavelength">
1427
- <property name="sizePolicy">
1428
- <sizepolicy hsizetype="Fixed" vsizetype="Preferred">
1429
- <horstretch>0</horstretch>
1430
- <verstretch>0</verstretch>
1431
- </sizepolicy>
1432
- </property>
1433
- <property name="text">
1434
- <string>Wavelength (nm)</string>
1435
- </property>
1436
- </widget>
1437
- </item>
1438
- <item row="0" column="1">
1439
- <widget class="QLineEdit" name="le_save_dir">
1440
- <property name="placeholderText">
1441
- <string/>
1442
- </property>
1443
- </widget>
1444
- </item>
1445
- <item row="4" column="1">
1446
- <widget class="QLineEdit" name="le_gpu_id">
1447
- <property name="sizePolicy">
1448
- <sizepolicy hsizetype="Preferred" vsizetype="Fixed">
1449
- <horstretch>0</horstretch>
1450
- <verstretch>0</verstretch>
1451
- </sizepolicy>
1452
- </property>
1453
- <property name="text">
1454
- <string>0</string>
1455
- </property>
1456
- <property name="placeholderText">
1457
- <string>Optional</string>
1458
- </property>
1459
- </widget>
1460
- </item>
1461
- <item row="7" column="0">
1462
- <widget class="QLabel" name="label_cond_na">
1463
- <property name="sizePolicy">
1464
- <sizepolicy hsizetype="Fixed" vsizetype="Preferred">
1465
- <horstretch>0</horstretch>
1466
- <verstretch>0</verstretch>
1467
- </sizepolicy>
1468
- </property>
1469
- <property name="text">
1470
- <string>Condenser NA</string>
1471
- </property>
1472
- </widget>
1473
- </item>
1474
- <item row="11" column="1">
1475
- <widget class="QCheckBox" name="cb_rotate_orientation">
1476
- <property name="text">
1477
- <string/>
1478
- </property>
1479
- </widget>
1480
- </item>
1481
- <item row="3" column="2">
1482
- <widget class="QPushButton" name="qbutton_browse_bg_path">
1483
- <property name="text">
1484
- <string>Browse</string>
1485
- </property>
1486
- </widget>
1487
- </item>
1488
- <item row="4" column="2">
1489
- <widget class="QCheckBox" name="chb_use_gpu">
1490
- <property name="text">
1491
- <string>Use GPU</string>
1492
- </property>
1493
- </widget>
1494
- </item>
1495
- <item row="3" column="0">
1496
- <widget class="QLabel" name="label_bg_path">
1497
- <property name="text">
1498
- <string>Background Path</string>
1499
- </property>
1500
- </widget>
1501
- </item>
1502
- <item row="5" column="1">
1503
- <widget class="QLineEdit" name="le_recon_wavelength">
1504
- <property name="sizePolicy">
1505
- <sizepolicy hsizetype="Preferred" vsizetype="Fixed">
1506
- <horstretch>0</horstretch>
1507
- <verstretch>0</verstretch>
1508
- </sizepolicy>
1509
- </property>
1510
- <property name="placeholderText">
1511
- <string>list: 530, 645 or single value: 532</string>
1512
- </property>
1513
- </widget>
1514
- </item>
1515
- <item row="9" column="1">
1516
- <widget class="QLineEdit" name="le_n_media">
1517
- <property name="sizePolicy">
1518
- <sizepolicy hsizetype="Preferred" vsizetype="Fixed">
1519
- <horstretch>0</horstretch>
1520
- <verstretch>0</verstretch>
1521
- </sizepolicy>
1522
- </property>
1523
- <property name="text">
1524
- <string>1.003</string>
1525
- </property>
1526
- </widget>
1527
- </item>
1528
- <item row="11" column="0">
1529
- <widget class="QLabel" name="label_orientation_offset">
1530
- <property name="text">
1531
- <string>Rotate Orientation (90 deg)</string>
1532
- </property>
1533
- </widget>
1534
- </item>
1535
- <item row="6" column="1">
1536
- <widget class="QLineEdit" name="le_obj_na">
1537
- <property name="sizePolicy">
1538
- <sizepolicy hsizetype="Preferred" vsizetype="Fixed">
1539
- <horstretch>0</horstretch>
1540
- <verstretch>0</verstretch>
1541
- </sizepolicy>
1542
- </property>
1543
- </widget>
1544
- </item>
1545
- <item row="6" column="0">
1546
- <widget class="QLabel" name="label_obj_na">
1547
- <property name="sizePolicy">
1548
- <sizepolicy hsizetype="Fixed" vsizetype="Preferred">
1549
- <horstretch>0</horstretch>
1550
- <verstretch>0</verstretch>
1551
- </sizepolicy>
1552
- </property>
1553
- <property name="text">
1554
- <string>Objective NA</string>
1555
- </property>
1556
- </widget>
1557
- </item>
1558
- <item row="8" column="1">
1559
- <widget class="QLineEdit" name="le_ps">
1560
- <property name="sizePolicy">
1561
- <sizepolicy hsizetype="Preferred" vsizetype="Fixed">
1562
- <horstretch>0</horstretch>
1563
- <verstretch>0</verstretch>
1564
- </sizepolicy>
1565
- </property>
1566
- <property name="text">
1567
- <string/>
1568
- </property>
1569
- </widget>
1570
- </item>
1571
- <item row="9" column="0">
1572
- <widget class="QLabel" name="label_n_media">
1573
- <property name="sizePolicy">
1574
- <sizepolicy hsizetype="Fixed" vsizetype="Preferred">
1575
- <horstretch>0</horstretch>
1576
- <verstretch>0</verstretch>
1577
- </sizepolicy>
1578
- </property>
1579
- <property name="text">
1580
- <string>RI of Obj. Media</string>
1581
- </property>
1582
- </widget>
1583
- </item>
1584
- <item row="0" column="0">
1585
- <widget class="QLabel" name="label_save_dir">
1586
- <property name="font">
1587
- <font>
1588
- <italic>false</italic>
1589
- <bold>false</bold>
1590
- </font>
1591
- </property>
1592
- <property name="text">
1593
- <string>Save Directory</string>
1594
- </property>
1595
- </widget>
1596
- </item>
1597
- <item row="8" column="0">
1598
- <widget class="QLabel" name="label_ps">
1599
- <property name="sizePolicy">
1600
- <sizepolicy hsizetype="Fixed" vsizetype="Preferred">
1601
- <horstretch>0</horstretch>
1602
- <verstretch>0</verstretch>
1603
- </sizepolicy>
1604
- </property>
1605
- <property name="text">
1606
- <string>Camera Pixel Size (um)</string>
1607
- </property>
1608
- </widget>
1609
- </item>
1610
- <item row="0" column="2">
1611
- <widget class="QPushButton" name="qbutton_browse_save_dir">
1612
- <property name="font">
1613
- <font>
1614
- <italic>false</italic>
1615
- <bold>false</bold>
1616
- </font>
1617
- </property>
1618
- <property name="text">
1619
- <string>Browse</string>
1620
- </property>
1621
- </widget>
1622
- </item>
1623
- <item row="3" column="1">
1624
- <widget class="QLineEdit" name="le_bg_path">
1625
- <property name="placeholderText">
1626
- <string/>
1627
- </property>
1628
- </widget>
1629
- </item>
1630
- <item row="13" column="0">
1631
- <widget class="QLabel" name="label_invert_phase_contrast">
1632
- <property name="text">
1633
- <string>Invert Phase Contrast</string>
1634
- </property>
1635
- </widget>
1636
- </item>
1637
- <item row="12" column="1">
1638
- <widget class="QCheckBox" name="cb_flip_orientation">
1639
- <property name="text">
1640
- <string/>
1641
- </property>
1642
- </widget>
1643
- </item>
1644
- <item row="13" column="1">
1645
- <widget class="QCheckBox" name="cb_invert_phase_contrast">
1646
- <property name="text">
1647
- <string/>
1648
- </property>
1649
- </widget>
1650
- </item>
1651
- </layout>
1652
- </widget>
1653
- </item>
1654
- <item row="0" column="0" colspan="2">
1655
- <widget class="QGroupBox" name="acquire">
1656
- <property name="sizePolicy">
1657
- <sizepolicy hsizetype="Preferred" vsizetype="Fixed">
1658
- <horstretch>0</horstretch>
1659
- <verstretch>0</verstretch>
1660
- </sizepolicy>
1661
- </property>
1662
- <property name="font">
1663
- <font>
1664
- <italic>false</italic>
1665
- <bold>true</bold>
1666
- </font>
1667
- </property>
1668
- <property name="title">
1669
- <string>Acquire</string>
1670
- </property>
1671
- <layout class="QGridLayout" name="gridLayout_13">
1672
- <property name="topMargin">
1673
- <number>12</number>
1674
- </property>
1675
- <property name="verticalSpacing">
1676
- <number>6</number>
1677
- </property>
1678
- <item row="2" column="0">
1679
- <widget class="QPushButton" name="qbutton_acq_ret_ori">
1680
- <property name="font">
1681
- <font>
1682
- <italic>false</italic>
1683
- <bold>false</bold>
1684
- </font>
1685
- </property>
1686
- <property name="text">
1687
- <string>Retardance + Orientation</string>
1688
- </property>
1689
- </widget>
1690
- </item>
1691
- <item row="2" column="1">
1692
- <widget class="QPushButton" name="qbutton_acq_phase_from_bf">
1693
- <property name="font">
1694
- <font>
1695
- <italic>false</italic>
1696
- <bold>false</bold>
1697
- </font>
1698
- </property>
1699
- <property name="text">
1700
- <string>Phase From BF</string>
1701
- </property>
1702
- </widget>
1703
- </item>
1704
- <item row="2" column="2">
1705
- <widget class="QPushButton" name="qbutton_acq_ret_ori_phase">
1706
- <property name="font">
1707
- <font>
1708
- <italic>false</italic>
1709
- <bold>false</bold>
1710
- </font>
1711
- </property>
1712
- <property name="text">
1713
- <string>Retardance + Orientation + Phase</string>
1714
- </property>
1715
- </widget>
1716
- </item>
1717
- <item row="3" column="0" colspan="3">
1718
- <widget class="QPushButton" name="qbutton_stop_acq">
1719
- <property name="font">
1720
- <font>
1721
- <italic>false</italic>
1722
- <bold>false</bold>
1723
- </font>
1724
- </property>
1725
- <property name="text">
1726
- <string>STOP</string>
1727
- </property>
1728
- </widget>
1729
- </item>
1730
- </layout>
1731
- </widget>
1732
- </item>
1733
- </layout>
1734
- </widget>
1735
- </widget>
1736
- </item>
1737
- </layout>
1738
- </widget>
1739
972
  <widget class="QWidget" name="Display">
1740
973
  <attribute name="title">
1741
974
  <string>Display</string>
@@ -2186,34 +1419,6 @@
2186
1419
  <tabstop>te_log</tabstop>
2187
1420
  <tabstop>le_notes_field</tabstop>
2188
1421
  <tabstop>qbutton_push_note</tabstop>
2189
- <tabstop>scrollArea_4</tabstop>
2190
- <tabstop>qbutton_acq_ret_ori</tabstop>
2191
- <tabstop>qbutton_stop_acq</tabstop>
2192
- <tabstop>acq_settings</tabstop>
2193
- <tabstop>le_zstart</tabstop>
2194
- <tabstop>le_zend</tabstop>
2195
- <tabstop>le_zstep</tabstop>
2196
- <tabstop>cb_acq_mode</tabstop>
2197
- <tabstop>cb_acq_channel</tabstop>
2198
- <tabstop>le_save_dir</tabstop>
2199
- <tabstop>qbutton_browse_save_dir</tabstop>
2200
- <tabstop>le_data_save_name</tabstop>
2201
- <tabstop>cb_bg_method</tabstop>
2202
- <tabstop>le_bg_path</tabstop>
2203
- <tabstop>qbutton_browse_bg_path</tabstop>
2204
- <tabstop>le_gpu_id</tabstop>
2205
- <tabstop>chb_use_gpu</tabstop>
2206
- <tabstop>le_recon_wavelength</tabstop>
2207
- <tabstop>le_obj_na</tabstop>
2208
- <tabstop>le_cond_na</tabstop>
2209
- <tabstop>le_ps</tabstop>
2210
- <tabstop>le_n_media</tabstop>
2211
- <tabstop>le_mag</tabstop>
2212
- <tabstop>le_pad_z</tabstop>
2213
- <tabstop>cb_phase_denoiser</tabstop>
2214
- <tabstop>le_phase_strength</tabstop>
2215
- <tabstop>le_rho</tabstop>
2216
- <tabstop>le_itr</tabstop>
2217
1422
  <tabstop>cb_colormap</tabstop>
2218
1423
  <tabstop>cb_hue</tabstop>
2219
1424
  <tabstop>le_sat_min</tabstop>