vtool-ibeis-ext 0.1.2__cp310-cp310-manylinux_2_28_x86_64.whl

vtool_ibeis_ext/__init__.py

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+__version__ = '0.1.2'
+__author__ = 'Jon Crall'
+__author_email__ = 'erotemic@gmail.com'
+__url__ = 'https://github.com/Erotemic/vtool_ibeis_ext'
+
+__mkinit__ = """
+mkinit -m vtool_ibeis_ext
+"""

vtool_ibeis_ext/sver_c_wrapper.py

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+#!/usr/bin/env python
+"""
+wraps c implementations slower parts of spatial verification
+
+CommandLine:
+    python -m vtool_ibeis_ext.sver_c_wrapper --rebuild-sver
+    python -m vtool_ibeis_ext.sver_c_wrapper --rebuild-sver
+    xdoctest -m vtool_ibeis_ext.sver_c_wrapper
+
+Example:
+    >>> import numpy as np
+    >>> kpts1 = np.array([[ 3.2e+01,  2.7e+01,  1.7e+01,  5.0e+00,  2.1e+01,  6.2e+00],
+    >>>                   [ 1.3e+02,  2.3e+01,  2.0e+01,  2.7e+00,  2.1e+01,  6.3e+00],
+    >>>                   [ 2.3e+02,  2.4e+01,  1.7e+01, -9.2e+00,  1.6e+01,  4.7e-01],
+    >>>                   [ 3.0e+01,  1.3e+02,  1.6e+01, -9.2e+00,  1.8e+01,  5.6e+00],
+    >>>                   [ 1.3e+02,  1.4e+02,  1.9e+01, -1.6e-01,  2.1e+01,  1.1e-01],
+    >>>                   [ 2.3e+02,  1.3e+02,  1.9e+01, -1.1e+00,  2.0e+01,  4.8e-02],
+    >>>                   [ 3.5e+01,  2.2e+02,  1.8e+01, -3.0e+00,  2.0e+01,  1.8e-01],
+    >>>                   [ 1.4e+02,  2.3e+02,  1.8e+01, -2.4e+00,  2.0e+01,  6.0e+00],
+    >>>                   [ 2.3e+02,  2.3e+02,  2.3e+01,  1.3e+00,  1.9e+01,  4.4e-01]], dtype=np.float64)
+    >>> kpts2 = np.array([[3.4e+01, 2.8e+01, 2.0e+01, 1.6e+00, 1.7e+01, 1.8e-02],
+    >>>                   [1.3e+02, 2.7e+01, 2.1e+01, 4.4e+00, 2.0e+01, 6.3e+00],
+    >>>                   [2.3e+02, 2.6e+01, 2.0e+01, 3.8e+00, 2.0e+01, 7.3e-03],
+    >>>                   [3.2e+01, 1.3e+02, 2.3e+01, 1.1e+00, 2.2e+01, 6.0e+00],
+    >>>                   [1.2e+02, 1.3e+02, 1.9e+01, 1.6e+00, 2.3e+01, 6.2e+00],
+    >>>                   [2.3e+02, 1.4e+02, 1.8e+01, 4.5e+00, 1.6e+01, 2.7e-01],
+    >>>                   [3.3e+01, 2.3e+02, 2.0e+01, 2.0e+00, 1.9e+01, 1.7e-01],
+    >>>                   [1.3e+02, 2.3e+02, 2.1e+01, 4.0e+00, 2.1e+01, 1.1e-01],
+    >>>                   [2.3e+02, 2.3e+02, 1.6e+01, 2.5e+00, 2.2e+01, 6.2e+00]], dtype=np.float64)
+    >>> fm = np.array([[0, 0],[1, 1],[2, 2],[3, 3],[4, 4],[5, 5],[6, 6],[7, 7],[8, 8]], dtype=np.int64)
+    >>> fs = np.array([1., 1., 1., 1., 1., 1., 1., 1., 1.], dtype=np.float64)
+    >>> xy_thresh_sqrd = 100
+    >>> scale_thresh_sqrd = 100
+    >>> ori_thresh = 100
+    >>> from vtool_ibeis_ext.sver_c_wrapper import *
+    >>> out_inliers, out_errors, out_mats = get_affine_inliers_cpp(kpts1, kpts2, fm, fs, xy_thresh_sqrd, scale_thresh_sqrd, ori_thresh)
+    >>> out_inliers, out_errors, out_mats = get_best_affine_inliers_cpp(kpts1, kpts2, fm, fs, xy_thresh_sqrd, scale_thresh_sqrd, ori_thresh)
+"""
+import ctypes as C
+import numpy as np
+import ubelt as ub
+from os.path import dirname, join
+
+
+if ub.WIN32:
+    lib_ext = '.dll'
+elif ub.DARWIN:
+    lib_ext = '.dylib'
+elif ub.LINUX:
+    lib_ext = '.so'
+else:
+    lib_ext = '.so'
+
+c_double_p = C.POINTER(C.c_double)
+
+# copied/adapted from _pyhesaff.py
+kpts_dtype = np.float64
+# this is because size_t is 32 bit on mingw even on 64 bit machines
+fm_dtype = np.int32 if ub.WIN32 else np.int64
+fs_dtype = np.float64
+FLAGS_RW = 'aligned, c_contiguous, writeable'
+FLAGS_RO = 'aligned, c_contiguous'
+
+kpts_t = np.ctypeslib.ndpointer(dtype=kpts_dtype, ndim=2, flags=FLAGS_RO)
+fm_t  = np.ctypeslib.ndpointer(dtype=fm_dtype, ndim=2, flags=FLAGS_RO)
+fs_t  = np.ctypeslib.ndpointer(dtype=fs_dtype, ndim=1, flags=FLAGS_RO)
+
+
+def inliers_t(ndim):
+    return np.ctypeslib.ndpointer(dtype=bool, ndim=ndim, flags=FLAGS_RW)
+
+
+def errs_t(ndim):
+    return np.ctypeslib.ndpointer(dtype=np.float64, ndim=ndim, flags=FLAGS_RW)
+
+
+def mats_t(ndim):
+    return np.ctypeslib.ndpointer(dtype=np.float64, ndim=ndim, flags=FLAGS_RW)
+
+dpath = dirname(__file__)
+
+
+lib_fname_cand = list(ub.find_path(
+    name='libsver' + lib_ext,
+    path=[
+        join(dpath, 'lib'),
+        dpath
+    ],
+    exact=False)
+)
+
+if len(lib_fname_cand):
+    if len(lib_fname_cand) > 1:
+        print('multiple libsver candidates: {}'.format(lib_fname_cand))
+    lib_fname = lib_fname_cand[0]
+else:
+    raise Exception('cannot find path')
+    lib_fname = None
+
+
+if __name__ != '__main__':
+    try:
+        c_sver = C.cdll[lib_fname]
+    except Exception:
+        print('Failed to open lib_fname = %r' % (lib_fname,))
+        raise
+    c_getaffineinliers = c_sver['get_affine_inliers']
+    c_getaffineinliers.restype = C.c_int
+    # for every affine hypothesis, for every keypoint pair (is
+    #  it an inlier, the error triples, the hypothesis itself)
+    c_getaffineinliers.argtypes = [kpts_t, C.c_size_t,
+                                   kpts_t, C.c_size_t,
+                                   fm_t, fs_t, C.c_size_t,
+                                   C.c_double, C.c_double, C.c_double,
+                                   inliers_t(2), errs_t(3), mats_t(3)]
+    # for the best affine hypothesis, for every keypoint pair
+    #  (is it an inlier, the error triples (transposed?), the
+    #   hypothesis itself)
+    c_getbestaffineinliers = c_sver['get_best_affine_inliers']
+    c_getbestaffineinliers.restype = C.c_int
+    c_getbestaffineinliers.argtypes = [kpts_t, C.c_size_t,
+                                       kpts_t, C.c_size_t,
+                                       fm_t, fs_t, C.c_size_t,
+                                       C.c_double, C.c_double, C.c_double,
+                                       inliers_t(1), errs_t(2), mats_t(2)]
+
+
+def get_affine_inliers_cpp(kpts1, kpts2, fm, fs, xy_thresh_sqrd, scale_thresh_sqrd, ori_thresh):
+    #np.ascontiguousarray(kpts1)
+    num_matches = len(fm)
+    fm = np.ascontiguousarray(fm, dtype=fm_dtype)
+    out_inlier_flags = np.empty((num_matches, num_matches), bool)
+    out_errors = np.empty((num_matches, 3, num_matches), np.float64)
+    out_mats = np.empty((num_matches, 3, 3), np.float64)
+    c_getaffineinliers(kpts1, kpts1.size,
+                       kpts2, kpts2.size,
+                       fm, fs, len(fm),
+                       xy_thresh_sqrd, scale_thresh_sqrd, ori_thresh,
+                       out_inlier_flags, out_errors, out_mats)
+    out_inliers = [np.where(row)[0] for row in out_inlier_flags]
+    out_errors = list(map(tuple, out_errors))
+    return out_inliers, out_errors, out_mats
+
+
+def get_best_affine_inliers_cpp(kpts1, kpts2, fm, fs, xy_thresh_sqrd,
+                                scale_thresh_sqrd, ori_thresh):
+    #np.ascontiguousarray(kpts1)
+    fm = np.ascontiguousarray(fm, dtype=fm_dtype)
+    out_inlier_flags = np.empty((len(fm),), bool)
+    out_errors = np.empty((3, len(fm)), np.float64)
+    out_mat = np.empty((3, 3), np.float64)
+    c_getbestaffineinliers(kpts1, 6 * len(kpts1),
+                           kpts2, 6 * len(kpts2),
+                           fm, fs, len(fm),
+                           xy_thresh_sqrd, scale_thresh_sqrd, ori_thresh,
+                           out_inlier_flags, out_errors, out_mat)
+    out_inliers = np.where(out_inlier_flags)[0]
+    out_errors = tuple(out_errors)
+    return out_inliers, out_errors, out_mat
+
+
+def call_hello():
+    lib = C.cdll['./sver.so']
+    hello = lib['hello_world']
+    hello()
+
+
+if __name__ == '__main__':
+    """
+    CommandLine:
+        xdoctest -m vtool_ibeis_ext.sver_c_wrapper
+    """
+    import xdoctest
+    xdoctest.doctest_module(__file__)

vtool_ibeis_ext-0.1.2.dist-info/METADATA

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+Metadata-Version: 2.4
+Name: vtool_ibeis_ext
+Version: 0.1.2
+Summary: The vtool_ibeis_ext module
+Home-page: https://github.com/Erotemic/vtool_ibeis_ext
+Author: Jon Crall, Avi Weinstock
+Author-email: erotemic@gmail.com
+License: Apache 2
+Classifier: Development Status :: 4 - Beta
+Classifier: Intended Audience :: Developers
+Classifier: Topic :: Software Development :: Libraries :: Python Modules
+Classifier: Topic :: Utilities
+Classifier: Programming Language :: Python :: 3.9
+Classifier: Programming Language :: Python :: 3.10
+Classifier: Programming Language :: Python :: 3.11
+Classifier: Programming Language :: Python :: 3.12
+Classifier: Programming Language :: Python :: 3.13
+Classifier: Programming Language :: Python :: 3.14
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+Requires-Dist: xdoctest==1.1.5; extra == "tests-strict"
+Dynamic: author
+Dynamic: author-email
+Dynamic: classifier
+Dynamic: description
+Dynamic: description-content-type
+Dynamic: home-page
+Dynamic: license
+Dynamic: provides-extra
+Dynamic: requires-dist
+Dynamic: requires-python
+Dynamic: summary
+
+
+The vtool_ibeis_ext Module
+==========================
+
+|Pypi| |PypiDownloads| |GithubActions| |Codecov|
+
+
++------------------+----------------------------------------------+
+| Github           | https://github.com/Erotemic/vtool_ibeis_ext  |
++------------------+----------------------------------------------+
+| Pypi             | https://pypi.org/project/vtool_ibeis_ext     |
++------------------+----------------------------------------------+
+
+
+Contains the binary spatial verification code used by `vtool_ibeis <https://github.com/Erotemic/vtool_ibeis>`_
+
+This is mainly maintained for the `IBEIS <https://github.com/Erotemic/IBEIS>`_ application.
+
+Binary packages related to IBEIS:
+
+* https://github.com/Erotemic/vtool_ibeis_ext
+* https://github.com/Erotemic/pyflann_ibeis
+* https://github.com/Erotemic/pyhesaff
+
+
+.. |Pypi| image:: https://img.shields.io/pypi/v/vtool_ibeis_ext.svg
+    :target: https://pypi.python.org/pypi/vtool_ibeis_ext
+
+.. |PypiDownloads| image:: https://img.shields.io/pypi/dm/vtool_ibeis_ext.svg
+    :target: https://pypistats.org/packages/vtool_ibeis_ext
+
+.. |GithubActions| image:: https://github.com/Erotemic/vtool_ibeis_ext/actions/workflows/tests.yml/badge.svg?branch=main
+    :target: https://github.com/Erotemic/vtool_ibeis_ext/actions?query=branch%3Amain
+
+.. |Codecov| image:: https://codecov.io/github/Erotemic/vtool_ibeis_ext/badge.svg?branch=main&service=github
+    :target: https://codecov.io/github/Erotemic/vtool_ibeis_ext?branch=main
+

vtool_ibeis_ext-0.1.2.dist-info/RECORD

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