vivarium-public-health 4.2.3__py3-none-any.whl → 4.2.5__py3-none-any.whl

vivarium_public_health/_version.py

@@ -1 +1 @@
-__version__ = "4.2.3"
+__version__ = "4.2.5"

vivarium_public_health/population/data_transformations.py

@@ -54,21 +54,27 @@ def assign_demographic_proportions(
 
     population_data["P(sex, location, age| year)"] = (
         population_data.groupby("year_start", as_index=False)
-        .apply(lambda sub_pop: sub_pop[["value"]] / sub_pop["value"].sum())
+        .apply(
+            lambda sub_pop: sub_pop[["value"]] / sub_pop["value"].sum(), include_groups=False
+        )
         .reset_index(level=0)["value"]
         .fillna(0.0)
     )
 
     population_data["P(sex, location | age, year)"] = (
         population_data.groupby(["age", "year_start"], as_index=False)
-        .apply(lambda sub_pop: sub_pop[["value"]] / sub_pop["value"].sum())
+        .apply(
+            lambda sub_pop: sub_pop[["value"]] / sub_pop["value"].sum(), include_groups=False
+        )
         .reset_index(level=0)["value"]
         .fillna(0.0)
     )
 
     population_data["P(age | year, sex, location)"] = (
         population_data.groupby(["year_start", "sex", "location"], as_index=False)
-        .apply(lambda sub_pop: sub_pop[["value"]] / sub_pop["value"].sum())
+        .apply(
+            lambda sub_pop: sub_pop[["value"]] / sub_pop["value"].sum(), include_groups=False
+        )
         .reset_index(level=0)["value"]
         .fillna(0.0)
     )

{vivarium_public_health-4.2.3.dist-info → vivarium_public_health-4.2.5.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: vivarium_public_health
-Version: 4.2.3
+Version: 4.2.5
 Summary: Components for modelling diseases, risks, and interventions with ``vivarium``
 Home-page: https://github.com/ihmeuw/vivarium_public_health
 Author: The vivarium developers
@@ -26,11 +26,12 @@ Classifier: Topic :: Scientific/Engineering :: Medical Science Apps.
 Classifier: Topic :: Scientific/Engineering :: Physics
 Classifier: Topic :: Software Development :: Libraries
 License-File: LICENSE.txt
+Requires-Dist: vivarium_build_utils<2.0.0,>=1.1.0
 Requires-Dist: vivarium>=3.4.3
 Requires-Dist: layered_config_tree>=3.2.0
 Requires-Dist: loguru
 Requires-Dist: numpy<2.0.0
-Requires-Dist: pandas
+Requires-Dist: pandas>=2.2.0
 Requires-Dist: scipy
 Requires-Dist: tables
 Requires-Dist: risk_distributions>=2.0.11

{vivarium_public_health-4.2.3.dist-info → vivarium_public_health-4.2.5.dist-info}/RECORD

@@ -1,6 +1,6 @@
 vivarium_public_health/__about__.py,sha256=RgWycPypKZS80TpSX7o41cREnG8PfguNHDHLuLyl820,487
 vivarium_public_health/__init__.py,sha256=GDeeP-7OlCBwPuv_xQoB1wNmvCaFsqfTB7qnnYApm0w,1343
-vivarium_public_health/_version.py,sha256=MoxmxdSxeGEknKNgNuSVukRLQF7wGD3OGdttUMerYqw,22
+vivarium_public_health/_version.py,sha256=BHihVu7dXonsKl2pRqg285-KtswJWtWvUz1CNNV7nPM,22
 vivarium_public_health/utilities.py,sha256=QNXQ6fhAr1HcV-GwKw7wQLz6QyuNxqNvMA-XujKjTgs,3035
 vivarium_public_health/disease/__init__.py,sha256=VUJHDLlE6ngo2qHNQUtZ8OWH5H_T7_ao-xsYKDkRmHw,443
 vivarium_public_health/disease/exceptions.py,sha256=vb30IIV82OiDf2cNZCs_E2rF6mdDDHbnZSND60no5CU,97
@@ -21,7 +21,7 @@ vivarium_public_health/plugins/parser.py,sha256=WoUisq0d-PfJtSzKYZ6C-s-fYdQpNiRB
 vivarium_public_health/population/__init__.py,sha256=x_9rB93q64Krw-kbBDI1-_U_JsPO1_QrL03AwiFlwXI,243
 vivarium_public_health/population/add_new_birth_cohorts.py,sha256=x6A60GE_F3I8AgLABNJ-2ziiUj52lAd66uX5yc2vIDI,9038
 vivarium_public_health/population/base_population.py,sha256=Wu797AL13KRLhXkYni_XocJBLfhfvCVgGeas08U3tCM,18898
-vivarium_public_health/population/data_transformations.py,sha256=J5FUW_pQKrhMcveYvTGgNUTkK_sFdmhu1JcAZ97hAKQ,22378
+vivarium_public_health/population/data_transformations.py,sha256=6VclPZ-Xgmyv4Btj04LgKEIBmKZJePRZFdFK_MaVa9c,22510
 vivarium_public_health/population/mortality.py,sha256=Mtv45FENNY0GlPIoVd3d3pRq01aEh4cjzNXIgEe6hMo,10364
 vivarium_public_health/results/__init__.py,sha256=rKUZGlRXJgEyFY4a_WJeg3XnC0l34S5guYZ0N9JJS4E,319
 vivarium_public_health/results/columns.py,sha256=V-L3JgTcsk51Zx9PcUwSgaE1iZjuGyfZ8aShPjynadU,495
@@ -43,8 +43,8 @@ vivarium_public_health/treatment/__init__.py,sha256=wONElu9aJbBYwpYIovYPYaN_GYfV
 vivarium_public_health/treatment/magic_wand.py,sha256=zg4I48G-l9fC6-qjvApbM1zNACJimZlX9ZZ9fdHKwvc,1985
 vivarium_public_health/treatment/scale_up.py,sha256=_bsf9c_yVc7-q_-yBcXimISTUfYzPps1auH0uEf7sfQ,7048
 vivarium_public_health/treatment/therapeutic_inertia.py,sha256=ZIHnpuszZwA_BkS53JbSLvpcnX_bqG2knwCUyUgkA9M,2362
-vivarium_public_health-4.2.3.dist-info/licenses/LICENSE.txt,sha256=mN4bNLUQNcN9njYRc_3jCZkfPySVpmM6MRps104FxA4,1548
-vivarium_public_health-4.2.3.dist-info/METADATA,sha256=IHYsE9iX8IK2CJSsYu93raZducaj4S-2Yg6OtPLU6yw,4237
-vivarium_public_health-4.2.3.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
-vivarium_public_health-4.2.3.dist-info/top_level.txt,sha256=VVInlpzCFD0UNNhjOq_j-a29odzjwUwYFTGfvqbi4dY,23
-vivarium_public_health-4.2.3.dist-info/RECORD,,
+vivarium_public_health-4.2.5.dist-info/licenses/LICENSE.txt,sha256=mN4bNLUQNcN9njYRc_3jCZkfPySVpmM6MRps104FxA4,1548
+vivarium_public_health-4.2.5.dist-info/METADATA,sha256=3wVsMLj8PPkAf79n83BGLZleGLzkxR0hHu7Z1S-kT84,4294
+vivarium_public_health-4.2.5.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
+vivarium_public_health-4.2.5.dist-info/top_level.txt,sha256=VVInlpzCFD0UNNhjOq_j-a29odzjwUwYFTGfvqbi4dY,23
+vivarium_public_health-4.2.5.dist-info/RECORD,,