vivarium-public-health 3.0.8__py3-none-any.whl → 3.0.10__py3-none-any.whl

vivarium_public_health/__init__.py

@@ -8,6 +8,44 @@ from vivarium_public_health.__about__ import (
     __uri__,
 )
 from vivarium_public_health._version import __version__
+from vivarium_public_health.disease import (
+    SI,
+    SIR,
+    SIS,
+    DiseaseModel,
+    DiseaseState,
+    NeonatalSWC_with_incidence,
+    NeonatalSWC_without_incidence,
+    RecoveredState,
+    RiskAttributableDisease,
+    SIR_fixed_duration,
+    SIS_fixed_duration,
+    SusceptibleState,
+    TransientDiseaseState,
+)
+from vivarium_public_health.plugins import CausesConfigurationParser
+from vivarium_public_health.population import (
+    BasePopulation,
+    FertilityAgeSpecificRates,
+    FertilityCrudeBirthRate,
+    FertilityDeterministic,
+    Mortality,
+)
+from vivarium_public_health.results import (
+    CategoricalRiskObserver,
+    DisabilityObserver,
+    DiseaseObserver,
+    MortalityObserver,
+    ResultsStratifier,
+)
+from vivarium_public_health.risks import (
+    LBWSGRisk,
+    LBWSGRiskEffect,
+    NonLogLinearRiskEffect,
+    Risk,
+    RiskEffect,
+)
+from vivarium_public_health.treatment import AbsoluteShift, LinearScaleUp, TherapeuticInertia
 
 __all__ = [
     __author__,

vivarium_public_health/_version.py

@@ -1 +1 @@
-__version__ = "3.0.8"
+__version__ = "3.0.10"

vivarium_public_health/disease/__init__.py

@@ -5,6 +5,7 @@ from .models import (
     SIS,
     NeonatalSWC_with_incidence,
     NeonatalSWC_without_incidence,
+    SIR_fixed_duration,
     SIS_fixed_duration,
 )
 from .special_disease import RiskAttributableDisease

vivarium_public_health/results/__init__.py

@@ -4,4 +4,5 @@ from .disease import DiseaseObserver
 from .mortality import MortalityObserver
 from .observer import PublicHealthObserver
 from .risk import CategoricalRiskObserver
+from .simple_cause import SimpleCause
 from .stratification import ResultsStratifier

vivarium_public_health/treatment/scale_up.py

@@ -13,8 +13,8 @@ import pandas as pd
 from vivarium import Component
 from vivarium.framework.engine import Builder
 from vivarium.framework.lookup import LookupTable
-from vivarium.framework.time import Time
 from vivarium.framework.values import Pipeline
+from vivarium.types import Time
 
 from vivarium_public_health.utilities import EntityString
 

{vivarium_public_health-3.0.8.dist-info → vivarium_public_health-3.0.10.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: vivarium_public_health
-Version: 3.0.8
+Version: 3.0.10
 Summary: Components for modelling diseases, risks, and interventions with ``vivarium``
 Home-page: https://github.com/ihmeuw/vivarium_public_health
 Author: The vivarium developers

{vivarium_public_health-3.0.8.dist-info → vivarium_public_health-3.0.10.dist-info}/RECORD

@@ -1,8 +1,8 @@
 vivarium_public_health/__about__.py,sha256=RgWycPypKZS80TpSX7o41cREnG8PfguNHDHLuLyl820,487
-vivarium_public_health/__init__.py,sha256=tomMOl3PI7O8GdxDWGBiBjT0Bwd31GpyQTYTzwIv108,361
-vivarium_public_health/_version.py,sha256=t6JaFW2r7Vd60izKSV1CNQtiT1rd9_DbycKPMMs3QA8,22
+vivarium_public_health/__init__.py,sha256=jYSQDGc86QMEW4iZ7wO1JCSP189n1zScIn6QKG470Kw,1321
+vivarium_public_health/_version.py,sha256=xS-MdV9u-8rYsWMV1VgxiWeHHmEWb63Js1BsRGmz0xo,23
 vivarium_public_health/utilities.py,sha256=5cl9jjVkOQ1UeXT4DjDMAhaBNNjAsDo-SVJwpv6FDw0,3071
-vivarium_public_health/disease/__init__.py,sha256=RuuiRcvAJfX9WQGt_WZZjxN7Cu3E5rMTmuaRS-UaFPM,419
+vivarium_public_health/disease/__init__.py,sha256=VUJHDLlE6ngo2qHNQUtZ8OWH5H_T7_ao-xsYKDkRmHw,443
 vivarium_public_health/disease/model.py,sha256=0WIYDEx-hwlUJp6Zl8m8bUMoWxuVkOWsJvh_YlZiOPs,8234
 vivarium_public_health/disease/models.py,sha256=01UK7yB2zGPFzmlIpvhd-XnGe6vSCMDza3QTidgY7Nc,3479
 vivarium_public_health/disease/special_disease.py,sha256=3vS1WsO__IwOK0Oe_CUmh3aaKrXIf2CANtmiqlS3pjc,14614
@@ -22,7 +22,7 @@ vivarium_public_health/population/add_new_birth_cohorts.py,sha256=k65Li0LYWl-JFH
 vivarium_public_health/population/base_population.py,sha256=4lUc8EZwzj5Ba36lSmW9yyxcRuBSMLqi_8Fy69ssq5E,17026
 vivarium_public_health/population/data_transformations.py,sha256=QVh_63Wwg9BUkaQm1pMSvBb-wsYrsgyADKIERAiEOVg,22188
 vivarium_public_health/population/mortality.py,sha256=w7b_TUssHjRcnULdXu7MXKfZBjCrlYWbB94oO3JWogI,10264
-vivarium_public_health/results/__init__.py,sha256=XKuX9HTXUur1kpHM7zuMSnkJxlg-W7eMAPmh8LP9Xp4,281
+vivarium_public_health/results/__init__.py,sha256=rKUZGlRXJgEyFY4a_WJeg3XnC0l34S5guYZ0N9JJS4E,319
 vivarium_public_health/results/columns.py,sha256=V-L3JgTcsk51Zx9PcUwSgaE1iZjuGyfZ8aShPjynadU,495
 vivarium_public_health/results/disability.py,sha256=JQm3Q7CoGCT2AgxaoH6MKkvnq4xF83wfFmEvEOvTmvA,9876
 vivarium_public_health/results/disease.py,sha256=OwxhPrfDsCnCZSaw8Yiq2AnibWikoqI-gM7xDdhFLcM,12529
@@ -40,10 +40,10 @@ vivarium_public_health/risks/implementations/__init__.py,sha256=47DEQpj8HBSa-_TI
 vivarium_public_health/risks/implementations/low_birth_weight_and_short_gestation.py,sha256=kxuJwkpJzGF8CqwNEemEA7CrohcxKQJtvUXLJtD1xm0,17948
 vivarium_public_health/treatment/__init__.py,sha256=wONElu9aJbBYwpYIovYPYaN_GYfVhPXtTeFWSdQMgA0,222
 vivarium_public_health/treatment/magic_wand.py,sha256=i9N57-MEuQv5B6dQ5iVMTAdOPghYcgiRRz-dTzigf1s,1980
-vivarium_public_health/treatment/scale_up.py,sha256=aKJmZ2G6N80n7oPkJM8IpqZOhftUBkAMBn4hR4EZzhE,7015
+vivarium_public_health/treatment/scale_up.py,sha256=9Cl3_MaCNPtUPPKXf3hWYepIwMCFlFY24jt2jeyFQO4,7006
 vivarium_public_health/treatment/therapeutic_inertia.py,sha256=8Z97s7GfcpfLu1U1ESJSqeEk4L__a3M0GbBV21MFg2s,2346
-vivarium_public_health-3.0.8.dist-info/LICENSE.txt,sha256=mN4bNLUQNcN9njYRc_3jCZkfPySVpmM6MRps104FxA4,1548
-vivarium_public_health-3.0.8.dist-info/METADATA,sha256=shnXq_LcxkxGy5qfx_3Kv1mF7Q8WCUhEIgziwNJPeXs,4061
-vivarium_public_health-3.0.8.dist-info/WHEEL,sha256=cVxcB9AmuTcXqmwrtPhNK88dr7IR_b6qagTj0UvIEbY,91
-vivarium_public_health-3.0.8.dist-info/top_level.txt,sha256=VVInlpzCFD0UNNhjOq_j-a29odzjwUwYFTGfvqbi4dY,23
-vivarium_public_health-3.0.8.dist-info/RECORD,,
+vivarium_public_health-3.0.10.dist-info/LICENSE.txt,sha256=mN4bNLUQNcN9njYRc_3jCZkfPySVpmM6MRps104FxA4,1548
+vivarium_public_health-3.0.10.dist-info/METADATA,sha256=pPeIbY7zeBd-vNNaZMJQL51VeEZ1GanLuxYpDs24ZtU,4062
+vivarium_public_health-3.0.10.dist-info/WHEEL,sha256=P9jw-gEje8ByB7_hXoICnHtVCrEwMQh-630tKvQWehc,91
+vivarium_public_health-3.0.10.dist-info/top_level.txt,sha256=VVInlpzCFD0UNNhjOq_j-a29odzjwUwYFTGfvqbi4dY,23
+vivarium_public_health-3.0.10.dist-info/RECORD,,

{vivarium_public_health-3.0.8.dist-info → vivarium_public_health-3.0.10.dist-info}/WHEEL

@@ -1,5 +1,5 @@
 Wheel-Version: 1.0
-Generator: setuptools (74.1.2)
+Generator: setuptools (75.3.0)
 Root-Is-Purelib: true
 Tag: py3-none-any