vivarium-public-health 1.0.1__py3-none-any.whl → 1.0.2__py3-none-any.whl

vivarium_public_health/_version.py

@@ -1 +1 @@
-__version__ = "1.0.1"
+__version__ = "1.0.2"

vivarium_public_health/metrics/disease.py

@@ -91,7 +91,8 @@ class DiseaseObserver:
             filter_string = (
                 f'{self.previous_state_column_name} == "{transition.from_state}" '
                 f'and {self.disease} == "{transition.to_state}" '
-                f"and tracked==True"
+                f"and tracked==True "
+                f'and alive == "alive"'
             )
             builder.results.register_observation(
                 name=f"{transition}_event_count",

{vivarium_public_health-1.0.1.dist-info → vivarium_public_health-1.0.2.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: vivarium-public-health
-Version: 1.0.1
+Version: 1.0.2
 Summary: Components for modelling diseases, risks, and interventions with ``vivarium``
 Home-page: https://github.com/ihmeuw/vivarium_public_health
 Author: The vivarium developers

{vivarium_public_health-1.0.1.dist-info → vivarium_public_health-1.0.2.dist-info}/RECORD

@@ -1,6 +1,6 @@
 vivarium_public_health/__about__.py,sha256=RgWycPypKZS80TpSX7o41cREnG8PfguNHDHLuLyl820,487
 vivarium_public_health/__init__.py,sha256=tomMOl3PI7O8GdxDWGBiBjT0Bwd31GpyQTYTzwIv108,361
-vivarium_public_health/_version.py,sha256=d4QHYmS_30j0hPN8NmNPnQ_Z0TphDRbu4MtQj9cT9e8,22
+vivarium_public_health/_version.py,sha256=Y3LSfRioSl2xch70pq_ULlvyECXyEtN3krVaWeGyaxk,22
 vivarium_public_health/utilities.py,sha256=_X9sZQ7flsi2sVWQ9zrf8GJw8QwZsPZm3NUjx1gu7bM,2555
 vivarium_public_health/disease/__init__.py,sha256=RuuiRcvAJfX9WQGt_WZZjxN7Cu3E5rMTmuaRS-UaFPM,419
 vivarium_public_health/disease/model.py,sha256=Kx_9WKRgKxeGAk-62vpWiyMrCw6vY3eKT3aYnHqYZ2M,7636
@@ -10,7 +10,7 @@ vivarium_public_health/disease/state.py,sha256=yOqKAAYx3KrERihm9TyfX3JS1EJu0V3Ds
 vivarium_public_health/disease/transition.py,sha256=NO7q708Rf268VqPCKluuli6PjQL8neMAL2DLzSa0GZg,4600
 vivarium_public_health/metrics/__init__.py,sha256=bWAvvdCm_7RPIazo12qFohA2x5-_EV6ceV8IhKS37sk,209
 vivarium_public_health/metrics/disability.py,sha256=Xgve93wrq45ErSERu59qiwlR7MhWRGodFOsXxZoUfDU,3841
-vivarium_public_health/metrics/disease.py,sha256=sazSoIQb3Jt6Xj-ArK9302C7sroghvl2CGFNMbK-RA8,4500
+vivarium_public_health/metrics/disease.py,sha256=WrBYLcla3Dm4D-oAcZ3k4vDSR_O3nw_A6LtZ1ReMag4,4541
 vivarium_public_health/metrics/mortality.py,sha256=llZ_fWidi7FzCCYecLgeN2EZ873LE4X9gu4deGhj0bc,4253
 vivarium_public_health/metrics/risk.py,sha256=YN6ADadFUACJt-aZsYTxHKh53HnRlumKnJr3_kz6kF0,3795
 vivarium_public_health/metrics/stratification.py,sha256=nFZzcM3UzUSiBcka6RHXjnfgPCPh6d_bM-xuma8yDxU,4374
@@ -40,8 +40,8 @@ vivarium_public_health/treatment/__init__.py,sha256=wONElu9aJbBYwpYIovYPYaN_GYfV
 vivarium_public_health/treatment/magic_wand.py,sha256=QR4YNyUGGX7jw57uu7tuuF_zpFXhVfDAa16UgBidZYA,1594
 vivarium_public_health/treatment/scale_up.py,sha256=cK_ZERRJbHaWqnjwkVJerue4ORTOjNRmjAsWdPGMxCU,7439
 vivarium_public_health/treatment/therapeutic_inertia.py,sha256=CTvG1zZJcJ2-blKsZjrfedgkmHGyLrBjYtQ_qNpphlM,2223
-vivarium_public_health-1.0.1.dist-info/LICENSE.txt,sha256=mN4bNLUQNcN9njYRc_3jCZkfPySVpmM6MRps104FxA4,1548
-vivarium_public_health-1.0.1.dist-info/METADATA,sha256=3YB4uIuXAWXjRVj66UATGQ_YYwW46jbuCOvPcMXPVt0,3388
-vivarium_public_health-1.0.1.dist-info/WHEEL,sha256=5sUXSg9e4bi7lTLOHcm6QEYwO5TIF1TNbTSVFVjcJcc,92
-vivarium_public_health-1.0.1.dist-info/top_level.txt,sha256=VVInlpzCFD0UNNhjOq_j-a29odzjwUwYFTGfvqbi4dY,23
-vivarium_public_health-1.0.1.dist-info/RECORD,,
+vivarium_public_health-1.0.2.dist-info/LICENSE.txt,sha256=mN4bNLUQNcN9njYRc_3jCZkfPySVpmM6MRps104FxA4,1548
+vivarium_public_health-1.0.2.dist-info/METADATA,sha256=ovKe6bcz0lgha6-IDGB8yhV7vdGU8ygSYvHYuc3EQRw,3388
+vivarium_public_health-1.0.2.dist-info/WHEEL,sha256=5sUXSg9e4bi7lTLOHcm6QEYwO5TIF1TNbTSVFVjcJcc,92
+vivarium_public_health-1.0.2.dist-info/top_level.txt,sha256=VVInlpzCFD0UNNhjOq_j-a29odzjwUwYFTGfvqbi4dY,23
+vivarium_public_health-1.0.2.dist-info/RECORD,,