vfbquery 0.4.1__py3-none-any.whl → 0.5.0__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (33) hide show
  1. test/readme_parser.py +15 -9
  2. test/term_info_queries_test.py +4 -4
  3. test/test_dataset_template_queries.py +138 -0
  4. test/test_default_caching.py +15 -11
  5. test/test_expression_overlaps.py +183 -0
  6. test/test_expression_pattern_fragments.py +123 -0
  7. test/test_images_neurons.py +152 -0
  8. test/test_images_that_develop_from.py +112 -0
  9. test/test_lineage_clones_in.py +190 -0
  10. test/test_nblast_queries.py +124 -0
  11. test/test_neuron_classes_fasciculating.py +187 -0
  12. test/test_neuron_inputs.py +193 -0
  13. test/test_neuron_neuron_connectivity.py +89 -0
  14. test/test_neuron_region_connectivity.py +117 -0
  15. test/test_neurons_part_here.py +204 -0
  16. test/test_new_owlery_queries.py +282 -0
  17. test/test_publication_transgene_queries.py +101 -0
  18. test/test_query_performance.py +743 -0
  19. test/test_similar_morphology.py +177 -0
  20. test/test_tracts_nerves_innervating.py +188 -0
  21. test/test_transcriptomics.py +223 -0
  22. vfbquery/__init__.py +1 -1
  23. vfbquery/neo4j_client.py +120 -0
  24. vfbquery/owlery_client.py +463 -0
  25. vfbquery/solr_fetcher.py +1 -1
  26. vfbquery/solr_result_cache.py +163 -24
  27. vfbquery/vfb_queries.py +2936 -625
  28. {vfbquery-0.4.1.dist-info → vfbquery-0.5.0.dist-info}/METADATA +1007 -49
  29. vfbquery-0.5.0.dist-info/RECORD +39 -0
  30. vfbquery-0.4.1.dist-info/RECORD +0 -19
  31. {vfbquery-0.4.1.dist-info → vfbquery-0.5.0.dist-info}/LICENSE +0 -0
  32. {vfbquery-0.4.1.dist-info → vfbquery-0.5.0.dist-info}/WHEEL +0 -0
  33. {vfbquery-0.4.1.dist-info → vfbquery-0.5.0.dist-info}/top_level.txt +0 -0
{vfbquery-0.4.1.dist-info → vfbquery-0.5.0.dist-info}/METADATA RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: vfbquery
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- Version: 0.4.1
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+ Version: 0.5.0
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  Summary: Wrapper for querying VirtualFlyBrain knowledge graph.
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  Home-page: https://github.com/VirtualFlyBrain/VFBquery
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  Author: VirtualFlyBrain
@@ -34,7 +34,7 @@ import vfbquery as vfb
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  ```
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  Class example:
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  ```python
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- vfb.get_term_info('FBbt_00003748')
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+ vfb.get_term_info('FBbt_00003748', force_refresh=True)
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  ```
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  ```json
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  {
@@ -141,6 +141,973 @@ vfb.get_term_info('FBbt_00003748')
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  },
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  "output_format": "table",
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  "count": 4
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+ },
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+ {
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+ "query": "NeuronsPartHere",
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+ "label": "Neurons with some part in medulla",
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+ "function": "get_neurons_with_part_in",
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+ "takes": {
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+ "short_form": {
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+ "$and": [
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+ "Class",
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+ "Anatomy"
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+ ]
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+ },
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+ "default": {
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+ "short_form": "FBbt_00003748"
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+ }
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+ },
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+ "preview": 5,
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+ "preview_columns": [
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+ "id",
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+ "label",
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+ "tags",
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+ "thumbnail"
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+ ],
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+ "preview_results": {
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+ "headers": {
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+ "id": {
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+ "title": "Add",
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+ "type": "selection_id",
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+ "order": -1
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+ },
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+ "label": {
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+ "title": "Name",
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+ "type": "markdown",
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+ "order": 0,
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+ "sort": {
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+ "0": "Asc"
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+ }
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+ },
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+ "tags": {
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+ "title": "Tags",
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+ "type": "tags",
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+ "order": 2
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+ },
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+ "thumbnail": {
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+ "title": "Thumbnail",
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+ "type": "markdown",
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+ "order": 9
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+ }
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+ },
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+ "rows": [
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+ {
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+ "id": "FBbt_20011362",
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+ "label": "[Cm1](FBbt_20011362)",
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+ "tags": "Adult|Cholinergic|Nervous_system|Visual_system",
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+ "thumbnail": "[![FlyWire:720575940621358986 aligned to JRC2018U](https://www.virtualflybrain.org/data/VFB/i/fw08/9799/VFB_00101567/thumbnail.png 'FlyWire:720575940621358986 aligned to JRC2018U')](FBbt_20011362)"
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+ },
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+ {
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+ "id": "FBbt_20011363",
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+ "label": "[Cm10](FBbt_20011363)",
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+ "tags": "Adult|GABAergic|Nervous_system|Visual_system",
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+ "thumbnail": "[![FlyWire:720575940629671015 aligned to JRC2018U](https://www.virtualflybrain.org/data/VFB/i/fw11/8027/VFB_00101567/thumbnail.png 'FlyWire:720575940629671015 aligned to JRC2018U')](FBbt_20011363)"
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+ },
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+ {
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+ "id": "FBbt_20011364",
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+ "label": "[Cm15](FBbt_20011364)",
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+ "tags": "Adult|GABAergic|Nervous_system|Visual_system",
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+ "thumbnail": "[![FlyWire:720575940611214802 aligned to JRC2018U](https://www.virtualflybrain.org/data/VFB/i/fw11/4277/VFB_00101567/thumbnail.png 'FlyWire:720575940611214802 aligned to JRC2018U')](FBbt_20011364)"
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+ },
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+ {
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+ "id": "FBbt_20011365",
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+ "label": "[Cm16](FBbt_20011365)",
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+ "tags": "Adult|Glutamatergic|Nervous_system|Visual_system",
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+ "thumbnail": "[![FlyWire:720575940631561002 aligned to JRC2018U](https://www.virtualflybrain.org/data/VFB/i/fw09/9899/VFB_00101567/thumbnail.png 'FlyWire:720575940631561002 aligned to JRC2018U')](FBbt_20011365)"
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+ },
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+ {
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+ "id": "FBbt_20011366",
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+ "label": "[Cm17](FBbt_20011366)",
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+ "tags": "Adult|GABAergic|Nervous_system|Visual_system",
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+ "thumbnail": "[![FlyWire:720575940624043817 aligned to JRC2018U](https://www.virtualflybrain.org/data/VFB/i/fw06/1609/VFB_00101567/thumbnail.png 'FlyWire:720575940624043817 aligned to JRC2018U')](FBbt_20011366)"
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+ }
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+ ]
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+ },
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+ "output_format": "table",
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+ "count": 472
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+ },
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+ {
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+ "query": "NeuronsSynaptic",
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+ "label": "Neurons with synaptic terminals in medulla",
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+ "function": "get_neurons_with_synapses_in",
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+ "takes": {
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+ "short_form": {
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+ "$and": [
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+ "Class",
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+ "Anatomy"
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+ ]
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+ },
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+ "default": {
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+ "short_form": "FBbt_00003748"
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+ }
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+ },
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+ "preview": 5,
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+ "preview_columns": [
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+ "id",
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+ "label",
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+ "tags",
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+ "thumbnail"
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+ ],
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+ "preview_results": {
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+ "headers": {
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+ "id": {
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+ "title": "Add",
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+ "type": "selection_id",
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+ "order": -1
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+ },
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+ "label": {
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+ "title": "Name",
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+ "type": "markdown",
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+ "order": 0,
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+ "sort": {
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+ "0": "Asc"
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+ }
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+ },
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+ "tags": {
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+ "title": "Tags",
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+ "type": "tags",
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+ "order": 2
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+ },
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+ "thumbnail": {
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+ "title": "Thumbnail",
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+ "type": "markdown",
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+ "order": 9
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+ }
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+ },
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+ "rows": [
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+ {
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+ "id": "FBbt_00053385",
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+ "label": "[medulla intrinsic neuron](FBbt_00053385)",
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+ "tags": "Adult|Nervous_system|Neuron|Visual_system",
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+ "thumbnail": "[![ME.8543 aligned to JRC2018U](https://www.virtualflybrain.org/data/VFB/i/fw06/0696/VFB_00101567/thumbnail.png 'ME.8543 aligned to JRC2018U')](FBbt_00053385)"
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+ },
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+ {
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+ "id": "FBbt_00110033",
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+ "label": "[medulla intrinsic neuron vGlutMinew1a](FBbt_00110033)",
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+ "tags": "Adult|Glutamatergic|Nervous_system|Visual_system",
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+ "thumbnail": ""
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+ },
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+ {
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+ "id": "FBbt_00110142",
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+ "label": "[OA-AL2i2](FBbt_00110142)",
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+ "tags": "Adult|Nervous_system|Octopaminergic",
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+ "thumbnail": "[![SPS.ME.7 aligned to JRC2018U](https://www.virtualflybrain.org/data/VFB/i/fw04/2336/VFB_00101567/thumbnail.png 'SPS.ME.7 aligned to JRC2018U')](FBbt_00110142)"
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+ },
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+ {
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+ "id": "FBbt_00110143",
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+ "label": "[OA-AL2i3](FBbt_00110143)",
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+ "tags": "Adult|Nervous_system|Octopaminergic|Visual_system",
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+ "thumbnail": "[![ME.970 aligned to JRC2018U](https://www.virtualflybrain.org/data/VFB/i/fw03/6562/VFB_00101567/thumbnail.png 'ME.970 aligned to JRC2018U')](FBbt_00110143)"
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+ },
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+ {
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+ "id": "FBbt_00110144",
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+ "label": "[OA-AL2i4](FBbt_00110144)",
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+ "tags": "Adult|Nervous_system|Octopaminergic",
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+ "thumbnail": "[![OA-AL2i4_R (JRC_OpticLobe:10677) aligned to JRC2018U](https://www.virtualflybrain.org/data/VFB/i/0010/450b/VFB_00101567/thumbnail.png 'OA-AL2i4_R (JRC_OpticLobe:10677) aligned to JRC2018U')](FBbt_00110144)"
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+ }
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+ ]
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+ },
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+ "output_format": "table",
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+ "count": 465
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+ },
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+ {
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+ "query": "NeuronsPresynapticHere",
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+ "label": "Neurons with presynaptic terminals in medulla",
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+ "function": "get_neurons_with_presynaptic_terminals_in",
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+ "takes": {
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+ "short_form": {
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+ "$and": [
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+ "Class",
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+ "Anatomy"
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+ ]
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+ },
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+ "default": {
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+ "short_form": "FBbt_00003748"
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+ }
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+ },
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+ "preview": 5,
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+ "preview_columns": [
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+ "id",
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+ "label",
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+ "tags",
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+ "thumbnail"
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+ ],
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+ "preview_results": {
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+ "headers": {
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+ "id": {
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+ "title": "Add",
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+ "type": "selection_id",
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+ "order": -1
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+ },
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+ "label": {
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+ "title": "Name",
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+ "type": "markdown",
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+ "order": 0,
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+ "sort": {
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+ "0": "Asc"
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+ }
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+ },
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+ "tags": {
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+ "title": "Tags",
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+ "type": "tags",
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+ "order": 2
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+ },
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+ "thumbnail": {
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+ "title": "Thumbnail",
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+ "type": "markdown",
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+ "order": 9
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+ }
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+ },
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+ "rows": [
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+ {
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+ "id": "FBbt_02000003",
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+ "label": "[yR8](FBbt_02000003)",
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+ "tags": "Adult|Cholinergic|Histaminergic|Nervous_system|Sensory_neuron|Visual_system",
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+ "thumbnail": "[![R8y_R (JRC_OpticLobe:203836) aligned to JRC2018U](https://www.virtualflybrain.org/data/VFB/i/0010/48b9/VFB_00101567/thumbnail.png 'R8y_R (JRC_OpticLobe:203836) aligned to JRC2018U')](FBbt_02000003)"
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+ },
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+ {
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+ "id": "FBbt_20007253",
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+ "label": "[CB3838](FBbt_20007253)",
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+ "tags": "Adult|GABAergic|Nervous_system|Visual_system",
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+ "thumbnail": "[![ME.38 aligned to JRC2018U](https://www.virtualflybrain.org/data/VFB/i/fw06/2030/VFB_00101567/thumbnail.png 'ME.38 aligned to JRC2018U')](FBbt_20007253)"
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+ },
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+ {
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+ "id": "FBbt_20007256",
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+ "label": "[Cm31a](FBbt_20007256)",
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+ "tags": "Adult|GABAergic|Nervous_system|Visual_system",
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+ "thumbnail": "[![ME.5 aligned to JRC2018U](https://www.virtualflybrain.org/data/VFB/i/fw06/2043/VFB_00101567/thumbnail.png 'ME.5 aligned to JRC2018U')](FBbt_20007256)"
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+ },
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+ {
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+ "id": "FBbt_20007257",
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+ "label": "[Mi19](FBbt_20007257)",
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+ "tags": "Adult|Nervous_system|Neuron|Visual_system",
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+ "thumbnail": "[![ME.5256 aligned to JRC2018U](https://www.virtualflybrain.org/data/VFB/i/fw06/1990/VFB_00101567/thumbnail.png 'ME.5256 aligned to JRC2018U')](FBbt_20007257)"
385
+ },
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+ {
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+ "id": "FBbt_20007258",
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+ "label": "[Cm35](FBbt_20007258)",
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+ "tags": "Adult|GABAergic|Nervous_system|Visual_system",
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+ "thumbnail": "[![ME.18 aligned to JRC2018U](https://www.virtualflybrain.org/data/VFB/i/fw06/2034/VFB_00101567/thumbnail.png 'ME.18 aligned to JRC2018U')](FBbt_20007258)"
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+ }
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+ ]
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+ },
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+ "output_format": "table",
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+ "count": 253
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+ },
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+ {
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+ "query": "NeuronsPostsynapticHere",
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+ "label": "Neurons with postsynaptic terminals in medulla",
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+ "function": "get_neurons_with_postsynaptic_terminals_in",
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+ "takes": {
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+ "short_form": {
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+ "$and": [
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+ "Class",
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+ "Anatomy"
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+ ]
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+ },
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+ "default": {
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+ "short_form": "FBbt_00003748"
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+ }
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+ },
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+ "preview": 5,
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+ "preview_columns": [
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+ "id",
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+ "label",
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+ "tags",
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+ "thumbnail"
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+ ],
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+ "preview_results": {
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+ "headers": {
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+ "id": {
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+ "title": "Add",
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+ "type": "selection_id",
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+ "order": -1
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+ },
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+ "label": {
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+ "title": "Name",
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+ "type": "markdown",
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+ "order": 0,
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+ "sort": {
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+ "0": "Asc"
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+ }
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+ },
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+ "tags": {
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+ "title": "Tags",
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+ "type": "tags",
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+ "order": 2
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+ },
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+ "thumbnail": {
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+ "title": "Thumbnail",
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+ "type": "markdown",
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+ "order": 9
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+ }
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+ },
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+ "rows": [
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+ {
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+ "id": "FBbt_20007253",
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+ "label": "[CB3838](FBbt_20007253)",
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+ "tags": "Adult|GABAergic|Nervous_system|Visual_system",
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+ "thumbnail": "[![ME.38 aligned to JRC2018U](https://www.virtualflybrain.org/data/VFB/i/fw06/2030/VFB_00101567/thumbnail.png 'ME.38 aligned to JRC2018U')](FBbt_20007253)"
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+ },
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+ {
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+ "id": "FBbt_20007256",
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+ "label": "[Cm31a](FBbt_20007256)",
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+ "tags": "Adult|GABAergic|Nervous_system|Visual_system",
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+ "thumbnail": "[![ME.5 aligned to JRC2018U](https://www.virtualflybrain.org/data/VFB/i/fw06/2043/VFB_00101567/thumbnail.png 'ME.5 aligned to JRC2018U')](FBbt_20007256)"
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+ },
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+ {
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+ "id": "FBbt_20007257",
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+ "label": "[Mi19](FBbt_20007257)",
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+ "tags": "Adult|Nervous_system|Neuron|Visual_system",
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+ "thumbnail": "[![ME.5256 aligned to JRC2018U](https://www.virtualflybrain.org/data/VFB/i/fw06/1990/VFB_00101567/thumbnail.png 'ME.5256 aligned to JRC2018U')](FBbt_20007257)"
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+ },
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+ {
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+ "id": "FBbt_20007258",
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+ "label": "[Cm35](FBbt_20007258)",
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+ "tags": "Adult|GABAergic|Nervous_system|Visual_system",
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+ "thumbnail": "[![ME.18 aligned to JRC2018U](https://www.virtualflybrain.org/data/VFB/i/fw06/2034/VFB_00101567/thumbnail.png 'ME.18 aligned to JRC2018U')](FBbt_20007258)"
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+ },
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+ {
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+ "id": "FBbt_20007259",
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+ "label": "[Cm32](FBbt_20007259)",
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+ "tags": "Adult|GABAergic|Nervous_system|Visual_system",
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+ "thumbnail": "[![ME.278 aligned to JRC2018U](https://www.virtualflybrain.org/data/VFB/i/fw06/1913/VFB_00101567/thumbnail.png 'ME.278 aligned to JRC2018U')](FBbt_20007259)"
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+ }
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+ ]
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+ },
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+ "output_format": "table",
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+ "count": 331
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+ },
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+ {
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+ "query": "PartsOf",
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+ "label": "Parts of medulla",
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+ "function": "get_parts_of",
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+ "takes": {
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+ "short_form": {
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+ "$and": [
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+ "Class"
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+ ]
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+ },
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+ "default": {
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+ "short_form": "FBbt_00003748"
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+ }
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+ },
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+ "preview": 5,
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+ "preview_columns": [
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+ "id",
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+ "label",
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+ "tags",
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+ "thumbnail"
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+ ],
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+ "preview_results": {
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+ "headers": {
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+ "id": {
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+ "title": "Add",
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+ "type": "selection_id",
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+ "order": -1
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+ },
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+ "label": {
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+ "title": "Name",
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+ "type": "markdown",
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+ "order": 0,
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+ "sort": {
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+ "0": "Asc"
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+ }
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+ },
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+ "tags": {
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+ "title": "Tags",
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+ "type": "tags",
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+ "order": 2
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+ },
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+ "thumbnail": {
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+ "title": "Thumbnail",
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+ "type": "markdown",
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+ "order": 9
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+ }
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+ },
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+ "rows": [
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+ {
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+ "id": "FBbt_00003750",
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+ "label": "[medulla layer M1](FBbt_00003750)",
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+ "tags": "Adult|Nervous_system|Synaptic_neuropil_subdomain|Visual_system",
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+ "thumbnail": ""
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+ },
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+ {
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+ "id": "FBbt_00003753",
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+ "label": "[medulla layer M4](FBbt_00003753)",
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+ "tags": "Adult|Nervous_system|Synaptic_neuropil_subdomain|Visual_system",
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+ "thumbnail": ""
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+ },
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+ {
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+ "id": "FBbt_00003754",
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+ "label": "[medulla layer M5](FBbt_00003754)",
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+ "tags": "Adult|Nervous_system|Synaptic_neuropil_subdomain|Visual_system",
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+ "thumbnail": ""
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+ },
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+ {
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+ "id": "FBbt_00003758",
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+ "label": "[medulla layer M8](FBbt_00003758)",
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+ "tags": "Adult|Nervous_system|Synaptic_neuropil_subdomain|Visual_system",
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+ "thumbnail": ""
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+ },
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+ {
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+ "id": "FBbt_00003759",
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+ "label": "[medulla layer M9](FBbt_00003759)",
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+ "tags": "Adult|Nervous_system|Synaptic_neuropil_subdomain|Visual_system",
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+ "thumbnail": ""
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+ }
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+ ]
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+ },
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+ "output_format": "table",
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+ "count": 28
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+ },
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+ {
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+ "query": "SubclassesOf",
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+ "label": "Subclasses of medulla",
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+ "function": "get_subclasses_of",
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+ "takes": {
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+ "short_form": {
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+ "$and": [
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+ "Class"
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+ ]
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+ },
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+ "default": {
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+ "short_form": "FBbt_00003748"
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+ }
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+ },
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+ "preview": 5,
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+ "preview_columns": [
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+ "id",
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+ "label",
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+ "tags",
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+ "thumbnail"
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+ ],
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+ "preview_results": {
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+ "headers": {
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+ "id": {
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+ "title": "Add",
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+ "type": "selection_id",
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+ "order": -1
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+ },
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+ "label": {
593
+ "title": "Name",
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+ "type": "markdown",
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+ "order": 0,
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+ "sort": {
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+ "0": "Asc"
598
+ }
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+ },
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+ "tags": {
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+ "title": "Tags",
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+ "type": "tags",
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+ "order": 2
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+ },
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+ "thumbnail": {
606
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616
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670
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672
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673
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675
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678
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680
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681
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688
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691
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692
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698
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699
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732
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737
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743
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747
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748
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751
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752
+ {
753
+ "id": "FBbt_00050019",
754
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756
+ "thumbnail": "[![DM1 clone of Yu 2013 aligned to JFRC2](https://www.virtualflybrain.org/data/VFB/i/0002/0006/VFB_00017894/thumbnail.png 'DM1 clone of Yu 2013 aligned to JFRC2')](FBbt_00050019)"
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+ },
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+ {
759
+ "id": "FBbt_00050051",
760
+ "label": "[adult VESa2 lineage clone](FBbt_00050051)",
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765
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766
+ "label": "[adult LALv1 lineage clone](FBbt_00050167)",
767
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768
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769
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+ {
771
+ "id": "FBbt_00050229",
772
+ "label": "[adult SLPpl1 lineage clone](FBbt_00050229)",
773
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780
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782
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783
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830
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832
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+ "id": "VFB_fw113167",
842
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847
+ "id": "VFB_fw113165",
848
+ "label": "[ME.17216](VFB_fw113165)",
849
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850
+ "thumbnail": ""
851
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852
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853
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854
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856
+ "thumbnail": ""
857
+ },
858
+ {
859
+ "id": "VFB_fw113166",
860
+ "label": "[ME.4619](VFB_fw113166)",
861
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+ "thumbnail": ""
863
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864
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865
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866
+ "label": "[ME.26172](VFB_fw113169)",
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870
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871
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876
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946
+ "name": "[Mi{MIC}dpr10[MI03557] expression pattern](VFBexp_FBti0145260)",
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969
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971
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985
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992
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1006
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1007
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1008
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1009
+ "DOI": ""
1010
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1011
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1012
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1014
+ "id": "VFBexp_FBti0143524",
1015
+ "name": "[PBac{566.P.SVS-1}IA-2[CPTI100013] expression pattern](VFBexp_FBti0143524)",
1016
+ "tags": "Expression_pattern",
1017
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1018
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1019
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+ "iri": "http://flybase.org/reports/FBrf0215202",
1021
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1026
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1033
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1035
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1036
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1037
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1038
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1039
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1040
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1041
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1042
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1043
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1044
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1069
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1074
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1104
+ "name": "[PBac{566.P.SVS-1}IA-2[CPTI100013] expression pattern](VFBexp_FBti0143524)",
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1108
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1109
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1110
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144
1111
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145
1112
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146
1113
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2177
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2178
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2179
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2180
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2181
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2182
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2187
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2189
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1232
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1233
- "order": 3,
1234
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2190
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2192
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2194
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2204
+ "dataset": "[GAL4 lines from McKellar et al., 2020](McKellar2020)",
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2210
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2211
  "tags": "Nervous_system|Adult",
1236
- "thumbnail": "[![JFRC2](http://www.virtualflybrain.org/data/VFB/i/0001/7894/VFB_00017894/thumbnail.png 'JFRC2')](VFB_00017894)",
1237
- "dataset": "[FlyLight - GMR GAL4 collection (Jenett2012)](Jenett2012)",
2212
+ "thumbnail": "[![JRC2018U](http://www.virtualflybrain.org/data/VFB/i/0010/1567/VFB_00101567/thumbnail.png 'JRC2018U')](VFB_00101567)",
2213
+ "dataset": "[JRC 2018 templates & ROIs](JRC2018)",
1238
2214
  "license": "[CC-BY-NC-SA](VFBlicense_CC_BY_NC_SA_4_0)"
1239
2215
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2216
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1247
2223
  "license": "[CC_BY](VFBlicense_CC_BY_4_0)"
1248
2224
  },
1249
2225
  {
1250
- "id": "VFB_00050000",
1251
- "order": 5,
1252
- "name": "[L1 larval CNS ssTEM - Cardona/Janelia](VFB_00050000)",
1253
- "tags": "Nervous_system|Larva",
1254
- "thumbnail": "[![L1 larval CNS ssTEM - Cardona/Janelia](http://www.virtualflybrain.org/data/VFB/i/0005/0000/VFB_00050000/thumbnail.png 'L1 larval CNS ssTEM - Cardona/Janelia')](VFB_00050000)",
1255
- "dataset": "[Neurons involved in larval fast escape response - EM (Ohyama2016)](Ohyama2015)",
2226
+ "id": "VFB_00100000",
2227
+ "order": 7,
2228
+ "name": "[COURT2018VNS](VFB_00100000)",
2229
+ "tags": "Nervous_system|Adult|Ganglion",
2230
+ "thumbnail": "[![COURT2018VNS](http://www.virtualflybrain.org/data/VFB/i/0010/0000/VFB_00100000/thumbnail.png 'COURT2018VNS')](VFB_00100000)",
2231
+ "dataset": "[Adult VNS neuropils (Court2017)](Court2017)",
1256
2232
  "license": "[CC_BY_SA](VFBlicense_CC_BY_SA_4_0)"
1257
2233
  },
1258
2234
  {
@@ -1261,8 +2237,8 @@ vfb.get_templates(return_dataframe=False)
1261
2237
  "name": "[L1 larval CNS ssTEM - Cardona/Janelia](VFB_00050000)",
1262
2238
  "tags": "Nervous_system|Larva",
1263
2239
  "thumbnail": "[![L1 larval CNS ssTEM - Cardona/Janelia](http://www.virtualflybrain.org/data/VFB/i/0005/0000/VFB_00050000/thumbnail.png 'L1 larval CNS ssTEM - Cardona/Janelia')](VFB_00050000)",
1264
- "dataset": "[larval hugin neurons - EM (Schlegel2016)](Schlegel2016)",
1265
- "license": "[CC_BY](VFBlicense_CC_BY_4_0)"
2240
+ "dataset": "[larval hugin neurons - EM (Schlegel2016)](Schlegel2016), [Neurons involved in larval fast escape response - EM (Ohyama2016)](Ohyama2015)",
2241
+ "license": "[CC_BY](VFBlicense_CC_BY_4_0), [CC_BY_SA](VFBlicense_CC_BY_SA_4_0)"
1266
2242
  },
1267
2243
  {
1268
2244
  "id": "VFB_00049000",
@@ -1273,15 +2249,6 @@ vfb.get_templates(return_dataframe=False)
1273
2249
  "dataset": "[L3 Larval CNS Template (Truman2016)](Truman2016)",
1274
2250
  "license": "[CC_BY_SA](VFBlicense_CC_BY_SA_4_0)"
1275
2251
  },
1276
- {
1277
- "id": "VFB_00100000",
1278
- "order": 7,
1279
- "name": "[COURT2018VNS](VFB_00100000)",
1280
- "tags": "Nervous_system|Adult|Ganglion",
1281
- "thumbnail": "[![COURT2018VNS](http://www.virtualflybrain.org/data/VFB/i/0010/0000/VFB_00100000/thumbnail.png 'COURT2018VNS')](VFB_00100000)",
1282
- "dataset": "[Adult VNS neuropils (Court2017)](Court2017)",
1283
- "license": "[CC_BY_SA](VFBlicense_CC_BY_SA_4_0)"
1284
- },
1285
2252
  {
1286
2253
  "id": "VFB_00030786",
1287
2254
  "order": 8,
@@ -1292,22 +2259,13 @@ vfb.get_templates(return_dataframe=False)
1292
2259
  "license": "[CC_BY_SA](VFBlicense_CC_BY_SA_4_0)"
1293
2260
  },
1294
2261
  {
1295
- "id": "VFB_00110000",
1296
- "order": 9,
1297
- "name": "[Adult Head (McKellar2020)](VFB_00110000)",
1298
- "tags": "Adult|Anatomy",
1299
- "thumbnail": "[![Adult Head (McKellar2020)](http://www.virtualflybrain.org/data/VFB/i/0011/0000/VFB_00110000/thumbnail.png 'Adult Head (McKellar2020)')](VFB_00110000)",
1300
- "dataset": "[GAL4 lines from McKellar et al., 2020](McKellar2020)",
1301
- "license": "[CC_BY_SA](VFBlicense_CC_BY_SA_4_0)"
1302
- },
1303
- {
1304
- "id": "VFB_00120000",
1305
- "order": 10,
1306
- "name": "[Adult T1 Leg (Kuan2020)](VFB_00120000)",
1307
- "tags": "Adult|Anatomy",
1308
- "thumbnail": "[![Adult T1 Leg (Kuan2020)](http://www.virtualflybrain.org/data/VFB/i/0012/0000/VFB_00120000/thumbnail.png 'Adult T1 Leg (Kuan2020)')](VFB_00120000)",
1309
- "dataset": "[Millimeter-scale imaging of a Drosophila leg at single-neuron resolution](Kuan2020)",
1310
- "license": "[CC_BY](VFBlicense_CC_BY_4_0)"
2262
+ "id": "VFB_00017894",
2263
+ "order": 3,
2264
+ "name": "[JFRC2](VFB_00017894)",
2265
+ "tags": "Nervous_system|Adult",
2266
+ "thumbnail": "[![JFRC2](http://www.virtualflybrain.org/data/VFB/i/0001/7894/VFB_00017894/thumbnail.png 'JFRC2')](VFB_00017894)",
2267
+ "dataset": "[FlyLight - GMR GAL4 collection (Jenett2012)](Jenett2012)",
2268
+ "license": "[CC-BY-NC-SA](VFBlicense_CC_BY_NC_SA_4_0)"
1311
2269
  }
1312
2270
  ],
1313
2271
  "count": 10