varvamp 1.2.1__py3-none-any.whl → 1.3__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- varvamp/__init__.py +6 -3
- varvamp/command.py +134 -60
- varvamp/scripts/alignment.py +54 -164
- varvamp/scripts/default_config.py +5 -3
- varvamp/scripts/logging.py +67 -21
- varvamp/scripts/param_estimation.py +84 -62
- varvamp/scripts/primers.py +190 -46
- varvamp/scripts/qpcr.py +141 -117
- varvamp/scripts/reporting.py +45 -40
- varvamp/scripts/scheme.py +101 -52
- varvamp-1.3.dist-info/METADATA +760 -0
- varvamp-1.3.dist-info/RECORD +22 -0
- {varvamp-1.2.1.dist-info → varvamp-1.3.dist-info}/WHEEL +1 -1
- varvamp-1.3.dist-info/licenses/LICENSE +674 -0
- varvamp-1.2.1.dist-info/METADATA +0 -78
- varvamp-1.2.1.dist-info/RECORD +0 -21
- {varvamp-1.2.1.dist-info → varvamp-1.3.dist-info}/entry_points.txt +0 -0
- {varvamp-1.2.1.dist-info → varvamp-1.3.dist-info}/top_level.txt +0 -0
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varvamp/__init__.py,sha256=sbcs7-vCusRk64aSi_6V0OR6qkU3WIIO5Xa5UEAmxO0,161
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varvamp/__main__.py,sha256=9R3mbX2_Q5LByPx8WLoTbvZ-G2dbRSMpDlgze0Wm5Fc,98
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varvamp/command.py,sha256=dE7RVM3CIWkgy-rLY_6T1qMgxy5MQj0A0Zaovs0hSIo,23151
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4
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varvamp/scripts/__init__.py,sha256=DtRsgfnA60BvccKMuD-Ueo1UpxaeANUfIWxGi1xPcV0,46
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varvamp/scripts/alignment.py,sha256=9EZWxWNCxxjJbOnh1_fvJ9uG32e6VRdu7GnOljwtOjo,3479
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varvamp/scripts/blast.py,sha256=yF1-FjL7-P8sxSO6x4Q15gzj_I3LbE8ZfP37w6K3Akk,8434
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varvamp/scripts/consensus.py,sha256=eU5eKU9iXyWeln2BW_LMPI8JiEq0_NXBI0jy4kMOvQg,3375
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8
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varvamp/scripts/default_config.py,sha256=PjpO6PtimT9E_QO6Sn7tt2LLpbGW4A0U_AWHnTC7yjg,3988
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varvamp/scripts/get_config.py,sha256=Kvg3YhttUbDeRxjKhfxLjI5JSKpPoiLSEYqcE6rT4Xk,2940
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varvamp/scripts/logging.py,sha256=tYgJ79dYediV8ErnoQ7RKRApI4cgahnql-ylweQOkek,22547
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varvamp/scripts/param_estimation.py,sha256=nHNngRdJBpKMeG4SwVJApwOfjfnoGXgRHfzH12PdXBw,5545
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12
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varvamp/scripts/primers.py,sha256=mWnzge10BU1zo5qxjTK--0dMLPvlmrbMja8lmsQ_hic,18178
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varvamp/scripts/qpcr.py,sha256=vUxhhKYKEAd8fxkvitM8HQSwgOvLGw6Mk-2GM0pRBZA,14460
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varvamp/scripts/regions.py,sha256=VgYAlZmkC3rT946yhAdxATi-YT4oGcEwAPa0BkkfWIg,3239
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varvamp/scripts/reporting.py,sha256=N0e0j51rbY9YOcrz1aW3CV7t8MVAIlH24Sp6TFPpNPM,23130
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varvamp/scripts/scheme.py,sha256=rX_B2YqpivJyrObt49CxcJ6HGycoAO5Pm4Wokcblsn0,18094
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varvamp-1.3.dist-info/licenses/LICENSE,sha256=OXLcl0T2SZ8Pmy2_dmlvKuetivmyPd5m1q-Gyd-zaYY,35149
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varvamp-1.3.dist-info/METADATA,sha256=4mu46WT84e4XQYU4qEAyVy5c64D8BA11bszOi7aZhmw,46350
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varvamp-1.3.dist-info/WHEEL,sha256=wUyA8OaulRlbfwMtmQsvNngGrxQHAvkKcvRmdizlJi0,92
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varvamp-1.3.dist-info/entry_points.txt,sha256=puzW-basyBexZT4JVRUfUEqobvFmEyfqRQaqFjp7rB0,49
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varvamp-1.3.dist-info/top_level.txt,sha256=11oVwE3SBUB9aTmvpvEDru95Tc5GZqQikzzFjw2eVGc,8
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varvamp-1.3.dist-info/RECORD,,
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