vantage6 5.0.0a35__py3-none-any.whl → 5.0.0a37__py3-none-any.whl

vantage6/cli/template/node_config.j2

@@ -109,25 +109,25 @@ node:
   # Storage settings on host of the node machine. This defines where the database is
   # stored as well as the task directory (which will contain the input/output of the
   # tasks).
-  {% if node.persistence is defined %}
   persistence:
     tasks:
+      {% if node.persistence is defined and node.persistence.tasks is defined %}
       storageClass: {{ node.persistence.tasks.storageClass | default('local-storage') }}
       size: {{ node.persistence.tasks.size | default('10Gi') }}
       hostPath: {{ node.persistence.tasks.hostPath | default('/path/to/where/task/files/are/stored') }}
-    database:
-      storageClass: {{ node.persistence.database.storageClass | default('local-storage') }}
-      size: {{ node.persistence.database.size | default('5Gi') }}
-  {% else %}
-  persistence:
-    tasks:
+      {% else %}
       storageClass: local-storage
       size: 10Gi
       hostPath: /path/to/where/task/files/are/stored
+      {% endif %}
     database:
+      {% if node.persistence is defined and node.persistence.database is defined %}
+      storageClass: {{ node.persistence.database.storageClass | default('local-storage') }}
+      size: {{ node.persistence.database.size | default('5Gi') }}
+      {% else %}
       storageClass: local-storage
       size: 5Gi
-  {% endif %}
+      {% endif %}
 
 
   # It is also possible not to specify the details of the service-based databases

vantage6/cli/template/node_config_nonk8s.j2

@@ -0,0 +1,33 @@
+api_path: {{ api_path }}
+encryption:
+  enabled: false
+  private_key: null
+logging:
+  backup_count: 5
+  datefmt: '%Y-%m-%d %H:%M:%S'
+  file: {{ logging["file"] }}
+  format: '%(asctime)s - %(name)-14s - %(levelname)-8s - %(message)s'
+  level: DEBUG
+  max_size: 1024
+  use_console: true
+  loggers:
+  - level: warning
+    name: urllib3
+  - level: warning
+    name: requests
+  - level: warning
+    name: engineio.client
+  - level: warning
+    name: docker.utils.config
+  - level: warning
+    name: docker.auth
+  - level: warning
+    name: kubernetes.client.rest
+node_proxy_port: {{ node_proxy_port }}
+port: {{ port }}
+server_url: {{ server_url }}
+task_dir: {{ task_dir}}
+dev:
+  task_dir_extension: {{ task_dir_extension }}
+task_namespace: {{ task_namespace }}
+{{- user_provided_config -}}

vantage6/cli/template/server_config.j2

@@ -96,9 +96,9 @@ server:
   {% if server.dev is defined %}
   dev:
     host_uri: {{ server.dev.host_uri | default('host.docker.internal') }}
-    # This should be set to true if you are running the algorithm store in the same
-    # cluster and namespace as the server
-    store_in_local_cluster: {{ server.dev.store_in_local_cluster | default(false) }}
+    # store address of the algorithm store. This can be provided to the server for
+    # a custom address of the local algorithm store within the k8s cluster.
+    store_address: {{ server.dev.store_address | default('http://vantage6-store-store.service.default.svc.cluster.local') }}
   {% endif %}
 
   # If you want to couple algorithm stores to the server on startup, you can add them here.
@@ -109,11 +109,13 @@ server:
     {% for store in server.algorithm_stores %}
     - name: {{ store.name }}
       url: {{ store.url }}
+      api_path: {{ store.api_path }}
     {% endfor %}
   {% else %}
   # algorithm_stores:
-  # - name: local store
+  # - name: Local store
   #   url: http://localhost:7602/api
+  #   api_path: /api
   {% endif %}
 
   # Cleanup settings: This is used to cleanup the database from old results.
@@ -180,6 +182,7 @@ server:
   #   - http://localhost:7600
   {% endif %}
 
+
 rabbitmq:
   # The image of the RabbitMQ server
   image:
@@ -226,7 +229,7 @@ database:
   # The name of the database
   name: {{ database.name | default('vantage6') }}
 
-  #hostpath of the database mount
+  # hostpath of the database mount
   volumePath: {{ database.volumePath }}
 
   # The name of the k8s node where the database is running
@@ -238,7 +241,7 @@ ui:
   # The image of the UI
   image: {{ ui.image | default('harbor2.vantage6.ai/infrastructure/ui:latest') }}
   # Service port for the UI
-  port: 7600
+  port: {{ ui.port | default(7600) }}
   # keycloak realm
   keycloakRealm: {{ ui.keycloakRealm | default('vantage6') }}
   # keycloak client
@@ -253,4 +256,4 @@ ui:
   # Community algorithm store URL.
   communityStoreUrl: {{ ui.communityStoreUrl | default('https://store.cotopaxi.vantage6.ai') }}
   # Community algorithm store API path
-  communityStoreApiPath: {{ ui.communityStoreApiPath | default('/api') }}
+  communityStoreApiPath: {{ ui.communityStoreApiPath | default('/api') }}

vantage6/cli/test/common/diagnostic_runner.py

@@ -1,11 +1,13 @@
 import json
-
 from typing import Any
+
 from rich.console import Console
 from rich.table import Table
 
+from vantage6.common import debug, info
+
 from vantage6.client import UserClient
-from vantage6.common import info, debug
+
 from vantage6.cli.globals import DIAGNOSTICS_IMAGE
 
 
@@ -62,7 +64,7 @@ class DiagnosticRunner:
                 set(self.organization_ids).intersection(online_orgs)
             )
 
-        info(f"Running diagnostics to {len(self.organization_ids)} " "organization(s)")
+        info(f"Running diagnostics to {len(self.organization_ids)} organization(s)")
         info(f"  organizations: {self.organization_ids}")
         info(f"  collaboration: {self.collaboration_id}")
 

vantage6/cli/use/namespace.py

@@ -2,9 +2,10 @@ import click
 import questionary
 from kubernetes import client, config
 
+from vantage6.common import error
+
 from vantage6.cli.config import CliConfig
 from vantage6.cli.utils import switch_context_and_namespace
-from vantage6.common import error
 
 
 @click.command()

vantage6/cli/utils.py

@@ -15,6 +15,34 @@ import questionary as q
 from vantage6.common import error, info, warning
 
 
+def _is_valid_k8s_dns_name(name: str) -> bool:
+    """
+    Validate a Kubernetes DNS-1035 label.
+
+    Rules:
+      - lower case alphanumeric or '-'
+      - start with a letter
+      - end with alphanumeric
+      - length 1-63
+    """
+    if len(name) == 0 or len(name) > 63:
+        return False
+    return re.match(r"^[a-z]([-a-z0-9]*[a-z0-9])?$", name) is not None
+
+
+def _check_k8s_dns_name(name: str) -> None:
+    """
+    Exit with error if the provided name is not a valid DNS-1035 label.
+    """
+    if not _is_valid_k8s_dns_name(name):
+        error(
+            f"Invalid name: '{name}'. Name must comply with the following rules: "
+            "letters, numbers, or '-', start with a letter, end with letter or number, "
+            "and be at most 63 characters."
+        )
+        exit(1)
+
+
 def check_config_name_allowed(name: str) -> None:
     """
     Check if configuration name is allowed
@@ -73,7 +101,7 @@ def remove_file(file: str | Path, file_type: str) -> None:
         warning(f"Could not remove {file_type} file: {file} does not exist")
 
 
-def prompt_config_name(name: str | None) -> None:
+def prompt_config_name(name: str | None) -> str:
     """
     Get a new configuration name from the user, or simply return the name if
     it is not None.
@@ -94,9 +122,13 @@ def prompt_config_name(name: str | None) -> None:
         except KeyboardInterrupt:
             error("Aborted by user!")
             exit(1)
+        if not name:
+            error("No configuration name provided!")
+            exit(1)
         if name.count(" ") > 0:
             name = name.replace(" ", "-")
             info(f"Replaced spaces from configuration name: {name}")
+    _check_k8s_dns_name(name)
     return name
 
 

{vantage6-5.0.0a35.dist-info → vantage6-5.0.0a37.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: vantage6
-Version: 5.0.0a35
+Version: 5.0.0a37
 Summary: vantage6 command line interface
 Author: Vantage6 Team
 Maintainer-email: Frank Martin <f.martin@iknl.nl>, Bart van Beusekom <b.vanbeusekom@iknl.nl>
@@ -14,12 +14,12 @@ Requires-Dist: ipython==8.10.0
 Requires-Dist: jinja2==3.1.6
 Requires-Dist: kubernetes==28.1.0
 Requires-Dist: pandas>=2.2.3
-Requires-Dist: questionary==1.10.0
+Requires-Dist: questionary==2.1.1
 Requires-Dist: rich==13.5.2
 Requires-Dist: schema==0.7.5
 Requires-Dist: sqlalchemy==2.0.37
-Requires-Dist: vantage6-client==5.0.0a35
-Requires-Dist: vantage6-common==5.0.0a35
+Requires-Dist: vantage6-client==5.0.0a37
+Requires-Dist: vantage6-common==5.0.0a37
 Provides-Extra: dev
 Requires-Dist: black; extra == 'dev'
 Requires-Dist: coverage==7.10.2; extra == 'dev'

vantage6-5.0.0a37.dist-info/RECORD

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