tree-sitter-analyzer 1.8.3__py3-none-any.whl → 1.9.0__py3-none-any.whl

tree_sitter_analyzer/languages/markdown_plugin.py

@@ -24,12 +24,12 @@ from ..encoding_utils import extract_text_slice, safe_encode
 from ..models import AnalysisResult, CodeElement
 from ..plugins.base import ElementExtractor, LanguagePlugin
 from ..utils import log_debug, log_error, log_warning
-from ..utils.tree_sitter_compat import TreeSitterQueryCompat, get_node_text_safe
+from ..utils.tree_sitter_compat import TreeSitterQueryCompat
 
 
 class MarkdownElement(CodeElement):
     """Markdown-specific code element"""
-    
+
     def __init__(
         self,
         name: str,
@@ -38,13 +38,13 @@ class MarkdownElement(CodeElement):
         raw_text: str,
         language: str = "markdown",
         element_type: str = "markdown",
-        level: Optional[int] = None,
-        url: Optional[str] = None,
-        alt_text: Optional[str] = None,
-        title: Optional[str] = None,
-        language_info: Optional[str] = None,
-        is_checked: Optional[bool] = None,
-        **kwargs
+        level: int | None = None,
+        url: str | None = None,
+        alt_text: str | None = None,
+        title: str | None = None,
+        language_info: str | None = None,
+        is_checked: bool | None = None,
+        **kwargs,
     ):
         super().__init__(
             name=name,
@@ -52,7 +52,7 @@ class MarkdownElement(CodeElement):
             end_line=end_line,
             raw_text=raw_text,
             language=language,
-            **kwargs
+            **kwargs,
         )
         self.element_type = element_type
         self.level = level  # For headers (1-6)
@@ -172,15 +172,15 @@ class MarkdownElementExtractor(ElementExtractor):
         try:
             # Track extracted links to prevent global duplicates (ensure reset)
             self._extracted_links = set()
-            
+
             self._extract_inline_links(tree.root_node, links)
             self._extract_reference_links(tree.root_node, links)
             self._extract_autolinks(tree.root_node, links)
-            
+
             # Clean up after extraction is complete
-            if hasattr(self, '_extracted_links'):
-                delattr(self, '_extracted_links')
-                
+            if hasattr(self, "_extracted_links"):
+                delattr(self, "_extracted_links")
+
         except Exception as e:
             log_debug(f"Error during link extraction: {e}")
             return []
@@ -189,7 +189,7 @@ class MarkdownElementExtractor(ElementExtractor):
         seen = set()
         unique_links = []
         for link in links:
-            key = (getattr(link, 'text', '') or "", getattr(link, 'url', '') or "")
+            key = (getattr(link, "text", "") or "", getattr(link, "url", "") or "")
             if key not in seen:
                 seen.add(key)
                 unique_links.append(link)
@@ -292,7 +292,9 @@ class MarkdownElementExtractor(ElementExtractor):
         horizontal_rules: list[MarkdownElement] = []
 
         if tree is None or tree.root_node is None:
-            log_debug("Tree or root_node is None, returning empty horizontal rules list")
+            log_debug(
+                "Tree or root_node is None, returning empty horizontal rules list"
+            )
             return horizontal_rules
 
         try:
@@ -339,7 +341,9 @@ class MarkdownElementExtractor(ElementExtractor):
         formatting_elements: list[MarkdownElement] = []
 
         if tree is None or tree.root_node is None:
-            log_debug("Tree or root_node is None, returning empty formatting elements list")
+            log_debug(
+                "Tree or root_node is None, returning empty formatting elements list"
+            )
             return formatting_elements
 
         try:
@@ -454,10 +458,10 @@ class MarkdownElementExtractor(ElementExtractor):
             start_point = node.start_point
             end_point = node.end_point
 
-            if (start_point[0] < 0 or start_point[0] >= len(self.content_lines)):
+            if start_point[0] < 0 or start_point[0] >= len(self.content_lines):
                 return ""
-            
-            if (end_point[0] < 0 or end_point[0] >= len(self.content_lines)):
+
+            if end_point[0] < 0 or end_point[0] >= len(self.content_lines):
                 return ""
 
             if start_point[0] == end_point[0]:
@@ -469,7 +473,9 @@ class MarkdownElementExtractor(ElementExtractor):
                 return result
             else:
                 lines = []
-                for i in range(start_point[0], min(end_point[0] + 1, len(self.content_lines))):
+                for i in range(
+                    start_point[0], min(end_point[0] + 1, len(self.content_lines))
+                ):
                     if i < len(self.content_lines):
                         line = self.content_lines[i]
                         if i == start_point[0] and i == end_point[0]:
@@ -492,7 +498,9 @@ class MarkdownElementExtractor(ElementExtractor):
             log_error(f"Fallback text extraction also failed: {fallback_error}")
             return ""
 
-    def _extract_atx_headers(self, root_node: "tree_sitter.Node", headers: list[MarkdownElement]) -> None:
+    def _extract_atx_headers(
+        self, root_node: "tree_sitter.Node", headers: list[MarkdownElement]
+    ) -> None:
         """Extract ATX-style headers (# ## ### etc.)"""
         for node in self._traverse_nodes(root_node):
             if node.type == "atx_heading":
@@ -500,23 +508,23 @@ class MarkdownElementExtractor(ElementExtractor):
                     start_line = node.start_point[0] + 1
                     end_line = node.end_point[0] + 1
                     raw_text = self._get_node_text_optimized(node)
-                    
+
                     # Extract header level and content
                     level = 1
                     content = raw_text.strip()
-                    
+
                     # Count # symbols to determine level
                     if content.startswith("#"):
                         level = len(content) - len(content.lstrip("#"))
                         content = content.lstrip("# ").rstrip()
-                    
+
                     header = MarkdownElement(
                         name=content or f"Header Level {level}",
                         start_line=start_line,
                         end_line=end_line,
                         raw_text=raw_text,
                         element_type="heading",
-                        level=level
+                        level=level,
                     )
                     # Add additional attributes for formatter
                     header.text = content or f"Header Level {level}"
@@ -525,7 +533,9 @@ class MarkdownElementExtractor(ElementExtractor):
                 except Exception as e:
                     log_debug(f"Failed to extract ATX header: {e}")
 
-    def _extract_setext_headers(self, root_node: "tree_sitter.Node", headers: list[MarkdownElement]) -> None:
+    def _extract_setext_headers(
+        self, root_node: "tree_sitter.Node", headers: list[MarkdownElement]
+    ) -> None:
         """Extract Setext-style headers (underlined)"""
         for node in self._traverse_nodes(root_node):
             if node.type == "setext_heading":
@@ -533,7 +543,7 @@ class MarkdownElementExtractor(ElementExtractor):
                     start_line = node.start_point[0] + 1
                     end_line = node.end_point[0] + 1
                     raw_text = self._get_node_text_optimized(node)
-                    
+
                     # Determine level based on underline character
                     level = 2  # Default to H2
                     lines = raw_text.strip().split("\n")
@@ -546,14 +556,14 @@ class MarkdownElementExtractor(ElementExtractor):
                         content = lines[0].strip()
                     else:
                         content = raw_text.strip()
-                    
+
                     header = MarkdownElement(
                         name=content or f"Header Level {level}",
                         start_line=start_line,
                         end_line=end_line,
                         raw_text=raw_text,
                         element_type="heading",
-                        level=level
+                        level=level,
                     )
                     # Add additional attributes for formatter
                     header.text = content or f"Header Level {level}"
@@ -562,7 +572,9 @@ class MarkdownElementExtractor(ElementExtractor):
                 except Exception as e:
                     log_debug(f"Failed to extract Setext header: {e}")
 
-    def _extract_fenced_code_blocks(self, root_node: "tree_sitter.Node", code_blocks: list[MarkdownElement]) -> None:
+    def _extract_fenced_code_blocks(
+        self, root_node: "tree_sitter.Node", code_blocks: list[MarkdownElement]
+    ) -> None:
         """Extract fenced code blocks"""
         for node in self._traverse_nodes(root_node):
             if node.type == "fenced_code_block":
@@ -570,13 +582,13 @@ class MarkdownElementExtractor(ElementExtractor):
                     start_line = node.start_point[0] + 1
                     end_line = node.end_point[0] + 1
                     raw_text = self._get_node_text_optimized(node)
-                    
+
                     # Extract language info
                     language_info = None
                     lines = raw_text.strip().split("\n")
                     if lines and lines[0].startswith("```"):
                         language_info = lines[0][3:].strip()
-                    
+
                     # Extract content (excluding fence markers)
                     content_lines = []
                     in_content = False
@@ -589,17 +601,16 @@ class MarkdownElementExtractor(ElementExtractor):
                                 break
                         if in_content:
                             content_lines.append(line)
-                    
-                    content = "\n".join(content_lines)
+
                     name = f"Code Block ({language_info or 'unknown'})"
-                    
+
                     code_block = MarkdownElement(
                         name=name,
                         start_line=start_line,
                         end_line=end_line,
                         raw_text=raw_text,
                         element_type="code_block",
-                        language_info=language_info
+                        language_info=language_info,
                     )
                     # Add additional attributes for formatter
                     code_block.language = language_info or "text"
@@ -609,7 +620,9 @@ class MarkdownElementExtractor(ElementExtractor):
                 except Exception as e:
                     log_debug(f"Failed to extract fenced code block: {e}")
 
-    def _extract_indented_code_blocks(self, root_node: "tree_sitter.Node", code_blocks: list[MarkdownElement]) -> None:
+    def _extract_indented_code_blocks(
+        self, root_node: "tree_sitter.Node", code_blocks: list[MarkdownElement]
+    ) -> None:
         """Extract indented code blocks"""
         for node in self._traverse_nodes(root_node):
             if node.type == "indented_code_block":
@@ -617,14 +630,14 @@ class MarkdownElementExtractor(ElementExtractor):
                     start_line = node.start_point[0] + 1
                     end_line = node.end_point[0] + 1
                     raw_text = self._get_node_text_optimized(node)
-                    
+
                     code_block = MarkdownElement(
                         name="Indented Code Block",
                         start_line=start_line,
                         end_line=end_line,
                         raw_text=raw_text,
                         element_type="code_block",
-                        language_info="indented"
+                        language_info="indented",
                     )
                     # Add additional attributes for formatter
                     code_block.language = "text"
@@ -634,10 +647,12 @@ class MarkdownElementExtractor(ElementExtractor):
                 except Exception as e:
                     log_debug(f"Failed to extract indented code block: {e}")
 
-    def _extract_inline_links(self, root_node: "tree_sitter.Node", links: list[MarkdownElement]) -> None:
+    def _extract_inline_links(
+        self, root_node: "tree_sitter.Node", links: list[MarkdownElement]
+    ) -> None:
         """Extract inline links"""
         import re
-        
+
         # Extract links from text within inline nodes using regular expressions
         for node in self._traverse_nodes(root_node):
             if node.type == "inline":
@@ -645,27 +660,30 @@ class MarkdownElementExtractor(ElementExtractor):
                     raw_text = self._get_node_text_optimized(node)
                     if not raw_text:
                         continue
-                    
+
                     # Inline link pattern: [text](url "title") (excluding images)
                     inline_pattern = r'(?<!\!)\[([^\]]*)\]\(([^)]*?)(?:\s+"([^"]*)")?\)'
                     matches = re.finditer(inline_pattern, raw_text)
-                    
+
                     for match in matches:
                         text = match.group(1) or ""
                         url = match.group(2) or ""
                         title = match.group(3) or ""
-                        
+
                         # Global duplicate check: process same text and URL combination only once
                         link_signature = f"{text}|{url}"
-                        if hasattr(self, '_extracted_links') and link_signature in self._extracted_links:
+                        if (
+                            hasattr(self, "_extracted_links")
+                            and link_signature in self._extracted_links
+                        ):
                             continue
-                        
-                        if hasattr(self, '_extracted_links'):
+
+                        if hasattr(self, "_extracted_links"):
                             self._extracted_links.add(link_signature)
-                        
+
                         start_line = node.start_point[0] + 1
                         end_line = node.end_point[0] + 1
-                        
+
                         link = MarkdownElement(
                             name=text or "Link",
                             start_line=start_line,
@@ -673,72 +691,76 @@ class MarkdownElementExtractor(ElementExtractor):
                             raw_text=match.group(0),
                             element_type="link",
                             url=url,
-                            title=title
+                            title=title,
                         )
                         # Add additional attributes for formatter
                         link.text = text or "Link"
                         link.type = "link"
                         links.append(link)
-                        
+
                 except Exception as e:
                     log_debug(f"Failed to extract inline link: {e}")
 
-    def _extract_reference_links(self, root_node: "tree_sitter.Node", links: list[MarkdownElement]) -> None:
+    def _extract_reference_links(
+        self, root_node: "tree_sitter.Node", links: list[MarkdownElement]
+    ) -> None:
         """Extract reference links"""
         import re
-        
+
         # Reference links also need to be extracted from inline nodes
         # Track already processed reference links to avoid duplicates
         processed_ref_links = set()
-        
+
         for node in self._traverse_nodes(root_node):
             if node.type == "inline":
                 try:
                     raw_text = self._get_node_text_optimized(node)
                     if not raw_text:
                         continue
-                    
+
                     # Reference link pattern: [text][ref]
-                    ref_pattern = r'\[([^\]]*)\]\[([^\]]*)\]'
+                    ref_pattern = r"\[([^\]]*)\]\[([^\]]*)\]"
                     matches = re.finditer(ref_pattern, raw_text)
-                    
+
                     for match in matches:
                         text = match.group(1) or ""
                         ref = match.group(2) or ""
-                        
+
                         # Skip image references (starting with !)
-                        if match.start() > 0 and raw_text[match.start()-1] == '!':
+                        if match.start() > 0 and raw_text[match.start() - 1] == "!":
                             continue
-                        
+
                         # Duplicate check: process same text and reference combination only once
                         start_line = node.start_point[0] + 1
                         ref_link_key = (text, ref, start_line)
-                        
+
                         if ref_link_key in processed_ref_links:
                             continue
                         processed_ref_links.add(ref_link_key)
-                        
+
                         end_line = node.end_point[0] + 1
-                        
+
                         link = MarkdownElement(
                             name=text or "Reference Link",
                             start_line=start_line,
                             end_line=end_line,
                             raw_text=match.group(0),
-                            element_type="reference_link"
+                            element_type="reference_link",
                         )
                         # Add additional attributes for formatter
                         link.text = text or "Reference Link"
                         link.type = "reference_link"
                         links.append(link)
-                        
+
                 except Exception as e:
                     log_debug(f"Failed to extract reference link: {e}")
 
-    def _extract_autolinks(self, root_node: "tree_sitter.Node", links: list[MarkdownElement]) -> None:
+    def _extract_autolinks(
+        self, root_node: "tree_sitter.Node", links: list[MarkdownElement]
+    ) -> None:
         """Extract autolinks"""
         import re
-        
+
         # Extract autolinks from text within inline nodes using regular expressions
         for node in self._traverse_nodes(root_node):
             if node.type == "inline":
@@ -746,46 +768,53 @@ class MarkdownElementExtractor(ElementExtractor):
                     raw_text = self._get_node_text_optimized(node)
                     if not raw_text:
                         continue
-                    
+
                     # Autolink pattern: <url> or <email>
-                    autolink_pattern = r'<(https?://[^>]+|mailto:[^>]+|[^@\s]+@[^@\s]+\.[^@\s]+)>'
+                    autolink_pattern = (
+                        r"<(https?://[^>]+|mailto:[^>]+|[^@\s]+@[^@\s]+\.[^@\s]+)>"
+                    )
                     matches = re.finditer(autolink_pattern, raw_text)
-                    
+
                     for match in matches:
                         url = match.group(1) or ""
                         full_match = match.group(0)
-                        
+
                         # Global duplicate check: process same URL for autolinks only once
                         autolink_signature = f"autolink|{url}"
-                        if hasattr(self, '_extracted_links') and autolink_signature in self._extracted_links:
+                        if (
+                            hasattr(self, "_extracted_links")
+                            and autolink_signature in self._extracted_links
+                        ):
                             continue
-                        
-                        if hasattr(self, '_extracted_links'):
+
+                        if hasattr(self, "_extracted_links"):
                             self._extracted_links.add(autolink_signature)
-                        
+
                         start_line = node.start_point[0] + 1
                         end_line = node.end_point[0] + 1
-                        
+
                         link = MarkdownElement(
                             name=url or "Autolink",
                             start_line=start_line,
                             end_line=end_line,
                             raw_text=full_match,
                             element_type="autolink",
-                            url=url
+                            url=url,
                         )
                         # Add additional attributes for formatter
                         link.text = url or "Autolink"
                         link.type = "autolink"
                         links.append(link)
-                        
+
                 except Exception as e:
                     log_debug(f"Failed to extract autolink: {e}")
 
-    def _extract_inline_images(self, root_node: "tree_sitter.Node", images: list[MarkdownElement]) -> None:
+    def _extract_inline_images(
+        self, root_node: "tree_sitter.Node", images: list[MarkdownElement]
+    ) -> None:
         """Extract inline images"""
         import re
-        
+
         # Extract images from text within inline nodes using regular expressions
         for node in self._traverse_nodes(root_node):
             if node.type == "inline":
@@ -793,20 +822,20 @@ class MarkdownElementExtractor(ElementExtractor):
                     raw_text = self._get_node_text_optimized(node)
                     if not raw_text:
                         continue
-                    
+
                     # Inline image pattern: ![alt](url "title")
                     image_pattern = r'!\[([^\]]*)\]\(([^)]*?)(?:\s+"([^"]*)")?\)'
                     matches = re.finditer(image_pattern, raw_text)
-                    
+
                     for match in matches:
                         alt_text = match.group(1) or ""
                         url = match.group(2) or ""
                         title = match.group(3) or ""
-                        
+
                         # Calculate line number from matched position
                         start_line = node.start_point[0] + 1
                         end_line = node.end_point[0] + 1
-                        
+
                         image = MarkdownElement(
                             name=alt_text or "Image",
                             start_line=start_line,
@@ -815,20 +844,22 @@ class MarkdownElementExtractor(ElementExtractor):
                             element_type="image",
                             url=url,
                             alt_text=alt_text,
-                            title=title
+                            title=title,
                         )
                         # Add additional attributes for formatter
                         image.alt = alt_text or ""
                         image.type = "image"
                         images.append(image)
-                        
+
                 except Exception as e:
                     log_debug(f"Failed to extract inline image: {e}")
 
-    def _extract_reference_images(self, root_node: "tree_sitter.Node", images: list[MarkdownElement]) -> None:
+    def _extract_reference_images(
+        self, root_node: "tree_sitter.Node", images: list[MarkdownElement]
+    ) -> None:
         """Extract reference images"""
         import re
-        
+
         # Reference images also need to be extracted from inline nodes
         for node in self._traverse_nodes(root_node):
             if node.type == "inline":
@@ -836,40 +867,40 @@ class MarkdownElementExtractor(ElementExtractor):
                     raw_text = self._get_node_text_optimized(node)
                     if not raw_text:
                         continue
-                    
+
                     # Reference image pattern: ![alt][ref]
-                    ref_image_pattern = r'!\[([^\]]*)\]\[([^\]]*)\]'
+                    ref_image_pattern = r"!\[([^\]]*)\]\[([^\]]*)\]"
                     matches = re.finditer(ref_image_pattern, raw_text)
-                    
+
                     for match in matches:
                         alt_text = match.group(1) or ""
-                        ref = match.group(2) or ""
-                        
                         start_line = node.start_point[0] + 1
                         end_line = node.end_point[0] + 1
-                        
+
                         image = MarkdownElement(
                             name=alt_text or "Reference Image",
                             start_line=start_line,
                             end_line=end_line,
                             raw_text=match.group(0),
-                            element_type="reference_image"
+                            element_type="reference_image",
                         )
                         # Add additional attributes for formatter
                         image.alt = alt_text or ""
                         image.type = "reference_image"
                         images.append(image)
-                        
+
                 except Exception as e:
                     log_debug(f"Failed to extract reference image: {e}")
 
-    def _extract_image_reference_definitions(self, root_node: "tree_sitter.Node", images: list[MarkdownElement]) -> None:
+    def _extract_image_reference_definitions(
+        self, root_node: "tree_sitter.Node", images: list[MarkdownElement]
+    ) -> None:
         """Extract image reference definitions"""
         import re
-        
+
         # Extract all reference definitions that could be used for images
         # We check if the URL points to an image file or if it's used by an image reference
-        
+
         # First, collect all image references used in the document
         image_refs_used = set()
         for node in self._traverse_nodes(root_node):
@@ -878,19 +909,19 @@ class MarkdownElementExtractor(ElementExtractor):
                     raw_text = self._get_node_text_optimized(node)
                     if not raw_text:
                         continue
-                    
+
                     # Find image references: ![alt][ref]
-                    ref_image_pattern = r'!\[([^\]]*)\]\[([^\]]*)\]'
+                    ref_image_pattern = r"!\[([^\]]*)\]\[([^\]]*)\]"
                     matches = re.finditer(ref_image_pattern, raw_text)
-                    
+
                     for match in matches:
                         ref = match.group(2) or ""
                         if ref:
                             image_refs_used.add(ref.lower())
-                            
+
                 except Exception as e:
                     log_debug(f"Failed to scan for image references: {e}")
-        
+
         # Now extract reference definitions that are used by images OR point to image files
         for node in self._traverse_nodes(root_node):
             if node.type == "link_reference_definition":
@@ -898,20 +929,31 @@ class MarkdownElementExtractor(ElementExtractor):
                     start_line = node.start_point[0] + 1
                     end_line = node.end_point[0] + 1
                     raw_text = self._get_node_text_optimized(node)
-                    
+
                     # Pattern: [label]: url "title"
                     ref_pattern = r'^\[([^\]]+)\]:\s*([^\s]+)(?:\s+"([^"]*)")?'
                     match = re.match(ref_pattern, raw_text.strip())
-                    
+
                     if match:
                         label = match.group(1) or ""
                         url = match.group(2) or ""
                         title = match.group(3) or ""
-                        
+
                         # Include if this reference is used by an image OR if URL looks like an image
                         is_used_by_image = label.lower() in image_refs_used
-                        is_image_url = any(url.lower().endswith(ext) for ext in ['.png', '.jpg', '.jpeg', '.gif', '.svg', '.webp', '.bmp'])
-                        
+                        is_image_url = any(
+                            url.lower().endswith(ext)
+                            for ext in [
+                                ".png",
+                                ".jpg",
+                                ".jpeg",
+                                ".gif",
+                                ".svg",
+                                ".webp",
+                                ".bmp",
+                            ]
+                        )
+
                         if is_used_by_image or is_image_url:
                             image_ref = MarkdownElement(
                                 name=f"Image Reference Definition: {label}",
@@ -921,17 +963,19 @@ class MarkdownElementExtractor(ElementExtractor):
                                 element_type="image_reference_definition",
                                 url=url,
                                 alt_text=label,
-                                title=title
+                                title=title,
                             )
                             # Add additional attributes for formatter
                             image_ref.alt = label
                             image_ref.type = "image_reference_definition"
                             images.append(image_ref)
-                        
+
                 except Exception as e:
                     log_debug(f"Failed to extract image reference definition: {e}")
 
-    def _extract_link_reference_definitions(self, root_node: "tree_sitter.Node", references: list[MarkdownElement]) -> None:
+    def _extract_link_reference_definitions(
+        self, root_node: "tree_sitter.Node", references: list[MarkdownElement]
+    ) -> None:
         """Extract link reference definitions"""
         for node in self._traverse_nodes(root_node):
             if node.type == "link_reference_definition":
@@ -939,19 +983,21 @@ class MarkdownElementExtractor(ElementExtractor):
                     start_line = node.start_point[0] + 1
                     end_line = node.end_point[0] + 1
                     raw_text = self._get_node_text_optimized(node)
-                    
+
                     reference = MarkdownElement(
                         name=raw_text or "Reference Definition",
                         start_line=start_line,
                         end_line=end_line,
                         raw_text=raw_text,
-                        element_type="reference_definition"
+                        element_type="reference_definition",
                     )
                     references.append(reference)
                 except Exception as e:
                     log_debug(f"Failed to extract reference definition: {e}")
 
-    def _extract_list_items(self, root_node: "tree_sitter.Node", lists: list[MarkdownElement]) -> None:
+    def _extract_list_items(
+        self, root_node: "tree_sitter.Node", lists: list[MarkdownElement]
+    ) -> None:
         """Extract lists (not individual items)"""
         for node in self._traverse_nodes(root_node):
             if node.type == "list":
@@ -959,25 +1005,29 @@ class MarkdownElementExtractor(ElementExtractor):
                     start_line = node.start_point[0] + 1
                     end_line = node.end_point[0] + 1
                     raw_text = self._get_node_text_optimized(node)
-                    
+
                     # Count list items in this list
                     item_count = 0
                     is_task_list = False
                     is_ordered = False
-                    
+
                     for child in node.children:
                         if child.type == "list_item":
                             item_count += 1
                             item_text = self._get_node_text_optimized(child)
-                            
+
                             # Check if it's a task list item
-                            if "[ ]" in item_text or "[x]" in item_text or "[X]" in item_text:
+                            if (
+                                "[ ]" in item_text
+                                or "[x]" in item_text
+                                or "[X]" in item_text
+                            ):
                                 is_task_list = True
-                            
+
                             # Check if it's an ordered list (starts with number)
                             if item_text.strip() and item_text.strip()[0].isdigit():
                                 is_ordered = True
-                    
+
                     # Determine list type
                     if is_task_list:
                         list_type = "task"
@@ -988,15 +1038,15 @@ class MarkdownElementExtractor(ElementExtractor):
                     else:
                         list_type = "unordered"
                         element_type = "list"
-                    
+
                     name = f"{list_type.title()} List ({item_count} items)"
-                    
+
                     list_element = MarkdownElement(
                         name=name,
                         start_line=start_line,
                         end_line=end_line,
                         raw_text=raw_text,
-                        element_type=element_type
+                        element_type=element_type,
                     )
                     # Add additional attributes for formatter
                     list_element.list_type = list_type
@@ -1006,7 +1056,9 @@ class MarkdownElementExtractor(ElementExtractor):
                 except Exception as e:
                     log_debug(f"Failed to extract list: {e}")
 
-    def _extract_pipe_tables(self, root_node: "tree_sitter.Node", tables: list[MarkdownElement]) -> None:
+    def _extract_pipe_tables(
+        self, root_node: "tree_sitter.Node", tables: list[MarkdownElement]
+    ) -> None:
         """Extract pipe tables"""
         for node in self._traverse_nodes(root_node):
             if node.type == "pipe_table":
@@ -1014,23 +1066,31 @@ class MarkdownElementExtractor(ElementExtractor):
                     start_line = node.start_point[0] + 1
                     end_line = node.end_point[0] + 1
                     raw_text = self._get_node_text_optimized(node)
-                    
+
                     # Count rows and columns
                     lines = raw_text.strip().split("\n")
-                    row_count = len([line for line in lines if line.strip() and not line.strip().startswith("|---")])
-                    
+                    row_count = len(
+                        [
+                            line
+                            for line in lines
+                            if line.strip() and not line.strip().startswith("|---")
+                        ]
+                    )
+
                     # Count columns from first row
                     column_count = 0
                     if lines:
                         first_row = lines[0]
-                        column_count = len([col for col in first_row.split("|") if col.strip()])
-                    
+                        column_count = len(
+                            [col for col in first_row.split("|") if col.strip()]
+                        )
+
                     table = MarkdownElement(
                         name=f"Table ({row_count} rows, {column_count} columns)",
                         start_line=start_line,
                         end_line=end_line,
                         raw_text=raw_text,
-                        element_type="table"
+                        element_type="table",
                     )
                     # Add additional attributes for formatter
                     table.row_count = row_count
@@ -1040,10 +1100,12 @@ class MarkdownElementExtractor(ElementExtractor):
                 except Exception as e:
                     log_debug(f"Failed to extract pipe table: {e}")
 
-    def _extract_block_quotes(self, root_node: "tree_sitter.Node", blockquotes: list[MarkdownElement]) -> None:
+    def _extract_block_quotes(
+        self, root_node: "tree_sitter.Node", blockquotes: list[MarkdownElement]
+    ) -> None:
         """Extract blockquotes"""
         import re
-        
+
         # Blockquotes are often represented as paragraphs starting with >
         for node in self._traverse_nodes(root_node):
             if node.type == "block_quote":
@@ -1051,22 +1113,24 @@ class MarkdownElementExtractor(ElementExtractor):
                     start_line = node.start_point[0] + 1
                     end_line = node.end_point[0] + 1
                     raw_text = self._get_node_text_optimized(node)
-                    
+
                     # Extract content without > markers
                     lines = raw_text.strip().split("\n")
                     content_lines = []
                     for line in lines:
                         # Remove > marker and optional space
-                        cleaned = re.sub(r'^>\s?', '', line)
+                        cleaned = re.sub(r"^>\s?", "", line)
                         content_lines.append(cleaned)
                     content = "\n".join(content_lines).strip()
-                    
+
                     blockquote = MarkdownElement(
-                        name=f"Blockquote: {content[:50]}..." if len(content) > 50 else f"Blockquote: {content}",
+                        name=f"Blockquote: {content[:50]}..."
+                        if len(content) > 50
+                        else f"Blockquote: {content}",
                         start_line=start_line,
                         end_line=end_line,
                         raw_text=raw_text,
-                        element_type="blockquote"
+                        element_type="blockquote",
                     )
                     blockquote.type = "blockquote"
                     blockquote.text = content
@@ -1074,7 +1138,9 @@ class MarkdownElementExtractor(ElementExtractor):
                 except Exception as e:
                     log_debug(f"Failed to extract blockquote: {e}")
 
-    def _extract_thematic_breaks(self, root_node: "tree_sitter.Node", horizontal_rules: list[MarkdownElement]) -> None:
+    def _extract_thematic_breaks(
+        self, root_node: "tree_sitter.Node", horizontal_rules: list[MarkdownElement]
+    ) -> None:
         """Extract thematic breaks (horizontal rules)"""
         for node in self._traverse_nodes(root_node):
             if node.type == "thematic_break":
@@ -1082,20 +1148,22 @@ class MarkdownElementExtractor(ElementExtractor):
                     start_line = node.start_point[0] + 1
                     end_line = node.end_point[0] + 1
                     raw_text = self._get_node_text_optimized(node)
-                    
+
                     hr = MarkdownElement(
                         name="Horizontal Rule",
                         start_line=start_line,
                         end_line=end_line,
                         raw_text=raw_text,
-                        element_type="horizontal_rule"
+                        element_type="horizontal_rule",
                     )
                     hr.type = "horizontal_rule"
                     horizontal_rules.append(hr)
                 except Exception as e:
                     log_debug(f"Failed to extract horizontal rule: {e}")
 
-    def _extract_html_blocks(self, root_node: "tree_sitter.Node", html_elements: list[MarkdownElement]) -> None:
+    def _extract_html_blocks(
+        self, root_node: "tree_sitter.Node", html_elements: list[MarkdownElement]
+    ) -> None:
         """Extract HTML block elements"""
         for node in self._traverse_nodes(root_node):
             if node.type == "html_block":
@@ -1103,28 +1171,31 @@ class MarkdownElementExtractor(ElementExtractor):
                     start_line = node.start_point[0] + 1
                     end_line = node.end_point[0] + 1
                     raw_text = self._get_node_text_optimized(node)
-                    
+
                     # Extract tag name if possible
                     import re
-                    tag_match = re.search(r'<(\w+)', raw_text)
+
+                    tag_match = re.search(r"<(\w+)", raw_text)
                     tag_name = tag_match.group(1) if tag_match else "HTML"
-                    
+
                     html_element = MarkdownElement(
                         name=f"HTML Block: {tag_name}",
                         start_line=start_line,
                         end_line=end_line,
                         raw_text=raw_text,
-                        element_type="html_block"
+                        element_type="html_block",
                     )
                     html_element.type = "html_block"
                     html_elements.append(html_element)
                 except Exception as e:
                     log_debug(f"Failed to extract HTML block: {e}")
 
-    def _extract_inline_html(self, root_node: "tree_sitter.Node", html_elements: list[MarkdownElement]) -> None:
+    def _extract_inline_html(
+        self, root_node: "tree_sitter.Node", html_elements: list[MarkdownElement]
+    ) -> None:
         """Extract inline HTML elements"""
         import re
-        
+
         # Look for HTML tags in inline content
         for node in self._traverse_nodes(root_node):
             if node.type == "inline":
@@ -1132,220 +1203,230 @@ class MarkdownElementExtractor(ElementExtractor):
                     raw_text = self._get_node_text_optimized(node)
                     if not raw_text:
                         continue
-                    
+
                     # Pattern for HTML tags (excluding autolinks)
                     # Exclude autolink patterns: <url> or <email>
-                    html_pattern = r'<(?!(?:https?://|mailto:|[^@\s]+@[^@\s]+\.[^@\s]+)[^>]*>)[^>]+>'
+                    html_pattern = r"<(?!(?:https?://|mailto:|[^@\s]+@[^@\s]+\.[^@\s]+)[^>]*>)[^>]+>"
                     matches = re.finditer(html_pattern, raw_text)
-                    
+
                     for match in matches:
                         tag_text = match.group(0)
-                        
+
                         # Extract tag name
-                        tag_match = re.search(r'<(\w+)', tag_text)
+                        tag_match = re.search(r"<(\w+)", tag_text)
                         tag_name = tag_match.group(1) if tag_match else "HTML"
-                        
+
                         start_line = node.start_point[0] + 1
                         end_line = node.end_point[0] + 1
-                        
+
                         html_element = MarkdownElement(
                             name=f"HTML Tag: {tag_name}",
                             start_line=start_line,
                             end_line=end_line,
                             raw_text=tag_text,
-                            element_type="html_inline"
+                            element_type="html_inline",
                         )
                         html_element.type = "html_inline"
                         html_element.name = tag_name  # Set name attribute for formatter
                         html_elements.append(html_element)
-                        
+
                 except Exception as e:
                     log_debug(f"Failed to extract inline HTML: {e}")
 
-    def _extract_emphasis_elements(self, root_node: "tree_sitter.Node", formatting_elements: list[MarkdownElement]) -> None:
+    def _extract_emphasis_elements(
+        self, root_node: "tree_sitter.Node", formatting_elements: list[MarkdownElement]
+    ) -> None:
         """Extract emphasis and strong emphasis elements"""
         import re
-        
+
         for node in self._traverse_nodes(root_node):
             if node.type == "inline":
                 try:
                     raw_text = self._get_node_text_optimized(node)
                     if not raw_text:
                         continue
-                    
+
                     # Pattern for bold text: **text** or __text__
-                    bold_pattern = r'\*\*([^*]+)\*\*|__([^_]+)__'
+                    bold_pattern = r"\*\*([^*]+)\*\*|__([^_]+)__"
                     bold_matches = re.finditer(bold_pattern, raw_text)
-                    
+
                     for match in bold_matches:
                         content = match.group(1) or match.group(2) or ""
                         start_line = node.start_point[0] + 1
                         end_line = node.end_point[0] + 1
-                        
+
                         bold_element = MarkdownElement(
                             name=f"Bold: {content}",
                             start_line=start_line,
                             end_line=end_line,
                             raw_text=match.group(0),
-                            element_type="strong_emphasis"
+                            element_type="strong_emphasis",
                         )
                         bold_element.type = "strong_emphasis"
                         bold_element.text = content
                         formatting_elements.append(bold_element)
-                    
+
                     # Pattern for italic text: *text* or _text_ (but not **text** or __text__)
-                    italic_pattern = r'(?<!\*)\*([^*]+)\*(?!\*)|(?<!_)_([^_]+)_(?!_)'
+                    italic_pattern = r"(?<!\*)\*([^*]+)\*(?!\*)|(?<!_)_([^_]+)_(?!_)"
                     italic_matches = re.finditer(italic_pattern, raw_text)
-                    
+
                     for match in italic_matches:
                         content = match.group(1) or match.group(2) or ""
                         start_line = node.start_point[0] + 1
                         end_line = node.end_point[0] + 1
-                        
+
                         italic_element = MarkdownElement(
                             name=f"Italic: {content}",
                             start_line=start_line,
                             end_line=end_line,
                             raw_text=match.group(0),
-                            element_type="emphasis"
+                            element_type="emphasis",
                         )
                         italic_element.type = "emphasis"
                         italic_element.text = content
                         formatting_elements.append(italic_element)
-                        
+
                 except Exception as e:
                     log_debug(f"Failed to extract emphasis elements: {e}")
 
-    def _extract_inline_code_spans(self, root_node: "tree_sitter.Node", formatting_elements: list[MarkdownElement]) -> None:
+    def _extract_inline_code_spans(
+        self, root_node: "tree_sitter.Node", formatting_elements: list[MarkdownElement]
+    ) -> None:
         """Extract inline code spans"""
         import re
-        
+
         for node in self._traverse_nodes(root_node):
             if node.type == "inline":
                 try:
                     raw_text = self._get_node_text_optimized(node)
                     if not raw_text:
                         continue
-                    
+
                     # Pattern for inline code: `code`
-                    code_pattern = r'`([^`]+)`'
+                    code_pattern = r"`([^`]+)`"
                     matches = re.finditer(code_pattern, raw_text)
-                    
+
                     for match in matches:
                         content = match.group(1) or ""
                         start_line = node.start_point[0] + 1
                         end_line = node.end_point[0] + 1
-                        
+
                         code_element = MarkdownElement(
                             name=f"Inline Code: {content}",
                             start_line=start_line,
                             end_line=end_line,
                             raw_text=match.group(0),
-                            element_type="inline_code"
+                            element_type="inline_code",
                         )
                         code_element.type = "inline_code"
                         code_element.text = content
                         formatting_elements.append(code_element)
-                        
+
                 except Exception as e:
                     log_debug(f"Failed to extract inline code: {e}")
 
-    def _extract_strikethrough_elements(self, root_node: "tree_sitter.Node", formatting_elements: list[MarkdownElement]) -> None:
+    def _extract_strikethrough_elements(
+        self, root_node: "tree_sitter.Node", formatting_elements: list[MarkdownElement]
+    ) -> None:
         """Extract strikethrough elements"""
         import re
-        
+
         for node in self._traverse_nodes(root_node):
             if node.type == "inline":
                 try:
                     raw_text = self._get_node_text_optimized(node)
                     if not raw_text:
                         continue
-                    
+
                     # Pattern for strikethrough: ~~text~~
-                    strike_pattern = r'~~([^~]+)~~'
+                    strike_pattern = r"~~([^~]+)~~"
                     matches = re.finditer(strike_pattern, raw_text)
-                    
+
                     for match in matches:
                         content = match.group(1) or ""
                         start_line = node.start_point[0] + 1
                         end_line = node.end_point[0] + 1
-                        
+
                         strike_element = MarkdownElement(
                             name=f"Strikethrough: {content}",
                             start_line=start_line,
                             end_line=end_line,
                             raw_text=match.group(0),
-                            element_type="strikethrough"
+                            element_type="strikethrough",
                         )
                         strike_element.type = "strikethrough"
                         strike_element.text = content
                         formatting_elements.append(strike_element)
-                        
+
                 except Exception as e:
                     log_debug(f"Failed to extract strikethrough: {e}")
 
-    def _extract_footnote_elements(self, root_node: "tree_sitter.Node", footnotes: list[MarkdownElement]) -> None:
+    def _extract_footnote_elements(
+        self, root_node: "tree_sitter.Node", footnotes: list[MarkdownElement]
+    ) -> None:
         """Extract footnote elements"""
         import re
-        
+
         for node in self._traverse_nodes(root_node):
             if node.type == "inline":
                 try:
                     raw_text = self._get_node_text_optimized(node)
                     if not raw_text:
                         continue
-                    
+
                     # Pattern for footnote references: [^1]
-                    footnote_ref_pattern = r'\[\^([^\]]+)\]'
+                    footnote_ref_pattern = r"\[\^([^\]]+)\]"
                     matches = re.finditer(footnote_ref_pattern, raw_text)
-                    
+
                     for match in matches:
                         ref_id = match.group(1) or ""
                         start_line = node.start_point[0] + 1
                         end_line = node.end_point[0] + 1
-                        
+
                         footnote_element = MarkdownElement(
                             name=f"Footnote Reference: {ref_id}",
                             start_line=start_line,
                             end_line=end_line,
                             raw_text=match.group(0),
-                            element_type="footnote_reference"
+                            element_type="footnote_reference",
                         )
                         footnote_element.type = "footnote_reference"
                         footnote_element.text = ref_id
                         footnotes.append(footnote_element)
-                        
+
                 except Exception as e:
                     log_debug(f"Failed to extract footnote reference: {e}")
-            
+
             # Look for footnote definitions
             elif node.type == "paragraph":
                 try:
                     raw_text = self._get_node_text_optimized(node)
                     if not raw_text:
                         continue
-                    
+
                     # Pattern for footnote definitions: [^1]: content
-                    footnote_def_pattern = r'^\[\^([^\]]+)\]:\s*(.+)$'
-                    match = re.match(footnote_def_pattern, raw_text.strip(), re.MULTILINE)
-                    
+                    footnote_def_pattern = r"^\[\^([^\]]+)\]:\s*(.+)$"
+                    match = re.match(
+                        footnote_def_pattern, raw_text.strip(), re.MULTILINE
+                    )
+
                     if match:
                         ref_id = match.group(1) or ""
                         content = match.group(2) or ""
                         start_line = node.start_point[0] + 1
                         end_line = node.end_point[0] + 1
-                        
+
                         footnote_element = MarkdownElement(
                             name=f"Footnote Definition: {ref_id}",
                             start_line=start_line,
                             end_line=end_line,
                             raw_text=raw_text,
-                            element_type="footnote_definition"
+                            element_type="footnote_definition",
                         )
                         footnote_element.type = "footnote_definition"
                         footnote_element.text = content
                         footnotes.append(footnote_element)
-                        
+
                 except Exception as e:
                     log_debug(f"Failed to extract footnote definition: {e}")
 
@@ -1358,33 +1439,33 @@ class MarkdownElementExtractor(ElementExtractor):
     def _parse_link_components(self, raw_text: str) -> tuple[str, str, str]:
         """Parse link components from raw text"""
         import re
-        
+
         # Pattern for [text](url "title")
         pattern = r'\[([^\]]*)\]\(([^)]*?)(?:\s+"([^"]*)")?\)'
         match = re.search(pattern, raw_text)
-        
+
         if match:
             text = match.group(1) or ""
             url = match.group(2) or ""
             title = match.group(3) or ""
             return text, url, title
-        
+
         return "", "", ""
 
     def _parse_image_components(self, raw_text: str) -> tuple[str, str, str]:
         """Parse image components from raw text"""
         import re
-        
+
         # Pattern for ![alt](url "title")
         pattern = r'!\[([^\]]*)\]\(([^)]*?)(?:\s+"([^"]*)")?\)'
         match = re.search(pattern, raw_text)
-        
+
         if match:
             alt_text = match.group(1) or ""
             url = match.group(2) or ""
             title = match.group(3) or ""
             return alt_text, url, title
-        
+
         return "", "", ""
 
 
@@ -1396,7 +1477,7 @@ class MarkdownPlugin(LanguagePlugin):
         super().__init__()
         self._language_cache: tree_sitter.Language | None = None
         self._extractor: MarkdownElementExtractor = MarkdownElementExtractor()
-        
+
         # Legacy compatibility attributes for tests
         self.language = "markdown"
         self.extractor = self._extractor
@@ -1421,22 +1502,30 @@ class MarkdownPlugin(LanguagePlugin):
         """Get the language name for Markdown (legacy compatibility)"""
         return "markdown"
 
-    def extract_functions(self, tree: "tree_sitter.Tree", source_code: str) -> list[CodeElement]:
+    def extract_functions(
+        self, tree: "tree_sitter.Tree", source_code: str
+    ) -> list[CodeElement]:
         """Extract functions from the tree (legacy compatibility)"""
         extractor = self.get_extractor()
         return extractor.extract_functions(tree, source_code)
 
-    def extract_classes(self, tree: "tree_sitter.Tree", source_code: str) -> list[CodeElement]:
+    def extract_classes(
+        self, tree: "tree_sitter.Tree", source_code: str
+    ) -> list[CodeElement]:
         """Extract classes from the tree (legacy compatibility)"""
         extractor = self.get_extractor()
         return extractor.extract_classes(tree, source_code)
 
-    def extract_variables(self, tree: "tree_sitter.Tree", source_code: str) -> list[CodeElement]:
+    def extract_variables(
+        self, tree: "tree_sitter.Tree", source_code: str
+    ) -> list[CodeElement]:
         """Extract variables from the tree (legacy compatibility)"""
         extractor = self.get_extractor()
         return extractor.extract_variables(tree, source_code)
 
-    def extract_imports(self, tree: "tree_sitter.Tree", source_code: str) -> list[CodeElement]:
+    def extract_imports(
+        self, tree: "tree_sitter.Tree", source_code: str
+    ) -> list[CodeElement]:
         """Extract imports from the tree (legacy compatibility)"""
         extractor = self.get_extractor()
         return extractor.extract_imports(tree, source_code)
@@ -1564,7 +1653,7 @@ class MarkdownPlugin(LanguagePlugin):
             references = extractor.extract_references(tree, source_code)
             lists = extractor.extract_lists(tree, source_code)
             tables = extractor.extract_tables(tree, source_code)
-            
+
             # Extract new element types
             blockquotes = extractor.extract_blockquotes(tree, source_code)
             horizontal_rules = extractor.extract_horizontal_rules(tree, source_code)
@@ -1611,8 +1700,6 @@ class MarkdownPlugin(LanguagePlugin):
     def execute_query(self, tree: "tree_sitter.Tree", query_name: str) -> dict:
         """Execute a specific query on the tree"""
         try:
-            import tree_sitter
-            
             language = self.get_tree_sitter_language()
             if not language:
                 return {"error": "Language not available"}
@@ -1629,7 +1716,11 @@ class MarkdownPlugin(LanguagePlugin):
             captures = TreeSitterQueryCompat.safe_execute_query(
                 language, query_string, tree.root_node, fallback_result=[]
             )
-            return {"captures": captures, "query": query_string, "matches": len(captures)}
+            return {
+                "captures": captures,
+                "query": query_string,
+                "matches": len(captures),
+            }
 
         except Exception as e:
             log_error(f"Query execution failed: {e}")
@@ -1639,7 +1730,7 @@ class MarkdownPlugin(LanguagePlugin):
         """Extract elements from source code using tree-sitter AST"""
         extractor = self.get_extractor()
         elements = []
-        
+
         try:
             elements.extend(extractor.extract_headers(tree, source_code))
             elements.extend(extractor.extract_code_blocks(tree, source_code))
@@ -1655,10 +1746,12 @@ class MarkdownPlugin(LanguagePlugin):
             elements.extend(extractor.extract_footnotes(tree, source_code))
         except Exception as e:
             log_error(f"Failed to extract elements: {e}")
-        
+
         return elements
 
-    def execute_query_strategy(self, tree: "tree_sitter.Tree", source_code: str, query_key: str) -> list[CodeElement]:
+    def execute_query_strategy(
+        self, tree: "tree_sitter.Tree", source_code: str, query_key: str
+    ) -> list[CodeElement]:
         """Execute Markdown-specific query strategy based on query_key"""
         if not tree or not source_code:
             return []
@@ -1674,54 +1767,82 @@ class MarkdownPlugin(LanguagePlugin):
             "function": lambda: self._extractor.extract_headers(tree, source_code),
             "headers": lambda: self._extractor.extract_headers(tree, source_code),
             "heading": lambda: self._extractor.extract_headers(tree, source_code),
-            
             # Code block-related queries (mapped to classes)
             "class": lambda: self._extractor.extract_code_blocks(tree, source_code),
-            "code_blocks": lambda: self._extractor.extract_code_blocks(tree, source_code),
-            "code_block": lambda: self._extractor.extract_code_blocks(tree, source_code),
-            
+            "code_blocks": lambda: self._extractor.extract_code_blocks(
+                tree, source_code
+            ),
+            "code_block": lambda: self._extractor.extract_code_blocks(
+                tree, source_code
+            ),
             # Link and image queries (mapped to variables)
-            "variable": lambda: self._extractor.extract_links(tree, source_code) + self._extractor.extract_images(tree, source_code),
+            "variable": lambda: self._extractor.extract_links(tree, source_code)
+            + self._extractor.extract_images(tree, source_code),
             "links": lambda: self._extractor.extract_links(tree, source_code),
             "link": lambda: self._extractor.extract_links(tree, source_code),
             "images": lambda: self._extractor.extract_images(tree, source_code),
             "image": lambda: self._extractor.extract_images(tree, source_code),
-            
             # Reference queries (mapped to imports)
             "import": lambda: self._extractor.extract_references(tree, source_code),
             "references": lambda: self._extractor.extract_references(tree, source_code),
             "reference": lambda: self._extractor.extract_references(tree, source_code),
-            
             # List and table queries
             "lists": lambda: self._extractor.extract_lists(tree, source_code),
             "list": lambda: self._extractor.extract_lists(tree, source_code),
-            "task_lists": lambda: [l for l in self._extractor.extract_lists(tree, source_code) if getattr(l, 'element_type', '') == 'task_list'],
+            "task_lists": lambda: [
+                lst
+                for lst in self._extractor.extract_lists(tree, source_code)
+                if getattr(lst, "element_type", "") == "task_list"
+            ],
             "tables": lambda: self._extractor.extract_tables(tree, source_code),
             "table": lambda: self._extractor.extract_tables(tree, source_code),
-            
             # Content structure queries
-            "blockquotes": lambda: self._extractor.extract_blockquotes(tree, source_code),
-            "blockquote": lambda: self._extractor.extract_blockquotes(tree, source_code),
-            "horizontal_rules": lambda: self._extractor.extract_horizontal_rules(tree, source_code),
-            "horizontal_rule": lambda: self._extractor.extract_horizontal_rules(tree, source_code),
-            
+            "blockquotes": lambda: self._extractor.extract_blockquotes(
+                tree, source_code
+            ),
+            "blockquote": lambda: self._extractor.extract_blockquotes(
+                tree, source_code
+            ),
+            "horizontal_rules": lambda: self._extractor.extract_horizontal_rules(
+                tree, source_code
+            ),
+            "horizontal_rule": lambda: self._extractor.extract_horizontal_rules(
+                tree, source_code
+            ),
             # HTML and formatting queries
-            "html_blocks": lambda: self._extractor.extract_html_elements(tree, source_code),
-            "html_block": lambda: self._extractor.extract_html_elements(tree, source_code),
+            "html_blocks": lambda: self._extractor.extract_html_elements(
+                tree, source_code
+            ),
+            "html_block": lambda: self._extractor.extract_html_elements(
+                tree, source_code
+            ),
             "html": lambda: self._extractor.extract_html_elements(tree, source_code),
-            "emphasis": lambda: self._extractor.extract_text_formatting(tree, source_code),
-            "formatting": lambda: self._extractor.extract_text_formatting(tree, source_code),
-            "text_formatting": lambda: self._extractor.extract_text_formatting(tree, source_code),
-            "inline_code": lambda: [f for f in self._extractor.extract_text_formatting(tree, source_code) if getattr(f, 'element_type', '') == 'inline_code'],
-            "strikethrough": lambda: [f for f in self._extractor.extract_text_formatting(tree, source_code) if getattr(f, 'element_type', '') == 'strikethrough'],
-            
+            "emphasis": lambda: self._extractor.extract_text_formatting(
+                tree, source_code
+            ),
+            "formatting": lambda: self._extractor.extract_text_formatting(
+                tree, source_code
+            ),
+            "text_formatting": lambda: self._extractor.extract_text_formatting(
+                tree, source_code
+            ),
+            "inline_code": lambda: [
+                f
+                for f in self._extractor.extract_text_formatting(tree, source_code)
+                if getattr(f, "element_type", "") == "inline_code"
+            ],
+            "strikethrough": lambda: [
+                f
+                for f in self._extractor.extract_text_formatting(tree, source_code)
+                if getattr(f, "element_type", "") == "strikethrough"
+            ],
             # Footnote queries
             "footnotes": lambda: self._extractor.extract_footnotes(tree, source_code),
             "footnote": lambda: self._extractor.extract_footnotes(tree, source_code),
-            
             # Comprehensive queries
             "all_elements": lambda: self.extract_elements(tree, source_code),
-            "text_content": lambda: self._extractor.extract_headers(tree, source_code) + self._extractor.extract_text_formatting(tree, source_code),
+            "text_content": lambda: self._extractor.extract_headers(tree, source_code)
+            + self._extractor.extract_text_formatting(tree, source_code),
         }
 
         # Execute the appropriate extraction method
@@ -1739,152 +1860,70 @@ class MarkdownPlugin(LanguagePlugin):
         """Get Markdown element categories mapping query_key to node_types"""
         return {
             # Header categories (function-like)
-            "function": [
-                "atx_heading",
-                "setext_heading"
-            ],
-            "headers": [
-                "atx_heading",
-                "setext_heading"
-            ],
-            "heading": [
-                "atx_heading",
-                "setext_heading"
-            ],
-            
+            "function": ["atx_heading", "setext_heading"],
+            "headers": ["atx_heading", "setext_heading"],
+            "heading": ["atx_heading", "setext_heading"],
             # Code block categories (class-like)
-            "class": [
-                "fenced_code_block",
-                "indented_code_block"
-            ],
-            "code_blocks": [
-                "fenced_code_block",
-                "indented_code_block"
-            ],
-            "code_block": [
-                "fenced_code_block",
-                "indented_code_block"
-            ],
-            
+            "class": ["fenced_code_block", "indented_code_block"],
+            "code_blocks": ["fenced_code_block", "indented_code_block"],
+            "code_block": ["fenced_code_block", "indented_code_block"],
             # Link and image categories (variable-like)
             "variable": [
                 "inline",  # Contains links and images
                 "link",
                 "autolink",
                 "reference_link",
-                "image"
+                "image",
             ],
             "links": [
                 "inline",  # Contains inline links
                 "link",
                 "autolink",
-                "reference_link"
-            ],
-            "link": [
-                "inline",
-                "link",
-                "autolink",
-                "reference_link"
+                "reference_link",
             ],
+            "link": ["inline", "link", "autolink", "reference_link"],
             "images": [
                 "inline",  # Contains inline images
-                "image"
-            ],
-            "image": [
-                "inline",
-                "image"
+                "image",
             ],
-            
+            "image": ["inline", "image"],
             # Reference categories (import-like)
-            "import": [
-                "link_reference_definition"
-            ],
-            "references": [
-                "link_reference_definition"
-            ],
-            "reference": [
-                "link_reference_definition"
-            ],
-            
+            "import": ["link_reference_definition"],
+            "references": ["link_reference_definition"],
+            "reference": ["link_reference_definition"],
             # List categories
-            "lists": [
-                "list",
-                "list_item"
-            ],
-            "list": [
-                "list",
-                "list_item"
-            ],
-            "task_lists": [
-                "list",
-                "list_item"
-            ],
-            
+            "lists": ["list", "list_item"],
+            "list": ["list", "list_item"],
+            "task_lists": ["list", "list_item"],
             # Table categories
-            "tables": [
-                "pipe_table",
-                "table"
-            ],
-            "table": [
-                "pipe_table",
-                "table"
-            ],
-            
+            "tables": ["pipe_table", "table"],
+            "table": ["pipe_table", "table"],
             # Content structure categories
-            "blockquotes": [
-                "block_quote"
-            ],
-            "blockquote": [
-                "block_quote"
-            ],
-            "horizontal_rules": [
-                "thematic_break"
-            ],
-            "horizontal_rule": [
-                "thematic_break"
-            ],
-            
+            "blockquotes": ["block_quote"],
+            "blockquote": ["block_quote"],
+            "horizontal_rules": ["thematic_break"],
+            "horizontal_rule": ["thematic_break"],
             # HTML categories
             "html_blocks": [
                 "html_block",
-                "inline"  # Contains inline HTML
-            ],
-            "html_block": [
-                "html_block",
-                "inline"
+                "inline",  # Contains inline HTML
             ],
-            "html": [
-                "html_block",
-                "inline"
-            ],
-            
+            "html_block": ["html_block", "inline"],
+            "html": ["html_block", "inline"],
             # Text formatting categories
             "emphasis": [
                 "inline"  # Contains emphasis elements
             ],
-            "formatting": [
-                "inline"
-            ],
-            "text_formatting": [
-                "inline"
-            ],
-            "inline_code": [
-                "inline"
-            ],
-            "strikethrough": [
-                "inline"
-            ],
-            
+            "formatting": ["inline"],
+            "text_formatting": ["inline"],
+            "inline_code": ["inline"],
+            "strikethrough": ["inline"],
             # Footnote categories
             "footnotes": [
                 "inline",  # Contains footnote references
-                "paragraph"  # Contains footnote definitions
+                "paragraph",  # Contains footnote definitions
             ],
-            "footnote": [
-                "inline",
-                "paragraph"
-            ],
-            
+            "footnote": ["inline", "paragraph"],
             # Comprehensive categories
             "all_elements": [
                 "atx_heading",
@@ -1904,12 +1943,7 @@ class MarkdownPlugin(LanguagePlugin):
                 "block_quote",
                 "thematic_break",
                 "html_block",
-                "paragraph"
+                "paragraph",
             ],
-            "text_content": [
-                "atx_heading",
-                "setext_heading",
-                "inline",
-                "paragraph"
-            ]
-        }
+            "text_content": ["atx_heading", "setext_heading", "inline", "paragraph"],
+        }