tooluniverse 1.0.7__py3-none-any.whl → 1.0.8__py3-none-any.whl

tooluniverse/utils.py

@@ -4,6 +4,7 @@ import re
 import hashlib
 import os
 import time
+import sys
 from typing import Dict, Any, Union, List
 from huggingface_hub import hf_hub_download
 from pydantic._internal._model_construction import ModelMetaclass
@@ -15,11 +16,22 @@ def download_from_hf(tool_config):
     relative_local_path = hf_parameters.get("save_to_local_dir")
 
     # Compute absolute path to save locally
-    if not os.path.isabs(relative_local_path):
-        project_root = os.path.dirname(os.path.dirname(os.path.dirname(__file__)))
-        absolute_local_dir = os.path.join(project_root, relative_local_path)
+    project_root = os.path.dirname(os.path.dirname(os.path.dirname(__file__)))
+
+    # If not provided, default to user cache directory under datasets
+    is_missing_path = relative_local_path is None
+    is_empty_string = (
+        isinstance(relative_local_path, str) and relative_local_path.strip() == ""
+    )
+    if is_missing_path or is_empty_string:
+        absolute_local_dir = os.path.join(get_user_cache_dir(), "datasets")
     else:
-        absolute_local_dir = relative_local_path
+        # Expand '~' and environment variables
+        expanded_path = os.path.expanduser(os.path.expandvars(relative_local_path))
+        if os.path.isabs(expanded_path):
+            absolute_local_dir = expanded_path
+        else:
+            absolute_local_dir = os.path.join(project_root, expanded_path)
 
     # Ensure the directory exists
     os.makedirs(absolute_local_dir, exist_ok=True)
@@ -62,6 +74,38 @@ def get_md5(input_str):
     return md5_hash.hexdigest()
 
 
+def get_user_cache_dir() -> str:
+    """
+    Return a cross-platform user cache directory for ToolUniverse.
+
+    macOS: ~/Library/Caches/ToolUniverse
+    Linux: $XDG_CACHE_HOME or ~/.cache/tooluniverse
+    Windows: %LOCALAPPDATA%\\ToolUniverse\\Cache
+    """
+    # Allow explicit override via environment variable
+    override_dir = os.getenv("TOOLUNIVERSE_TMPDIR")
+    if override_dir and override_dir.strip():
+        return os.path.expanduser(os.path.expandvars(override_dir))
+
+    platform = sys.platform
+    home_dir = os.path.expanduser("~")
+
+    if platform == "darwin":
+        return os.path.join(home_dir, "Library", "Caches", "ToolUniverse")
+
+    if platform.startswith("win"):
+        local_app_data = os.getenv("LOCALAPPDATA") or os.path.join(
+            home_dir, "AppData", "Local"
+        )
+        return os.path.join(local_app_data, "ToolUniverse", "Cache")
+
+    # Default: Linux/Unix
+    xdg_cache = os.getenv("XDG_CACHE_HOME")
+    if xdg_cache and xdg_cache.strip():
+        return os.path.join(xdg_cache, "tooluniverse")
+    return os.path.join(home_dir, ".cache", "tooluniverse")
+
+
 def yaml_to_dict(yaml_file_path):
     """
     Convert a YAML file to a dictionary.
@@ -138,6 +182,9 @@ def evaluate_function_call(tool_definition, function_call):
     type_mismatches = []
 
     for param, value in function_call["arguments"].items():
+        # Skip validation for special parameters that are handled internally
+        if param == "_tooluniverse_stream":
+            continue
         if param not in valid_params:
             invalid_params.append(param)
         else:

tooluniverse/zenodo_tool.py

@@ -32,7 +32,8 @@ class ZenodoTool(BaseTool):
             "size": max(1, min(max_results, 200)),
             "all_versions": 1,
         }
-        if community:
+        # Only add communities filter if community is provided and not empty
+        if community and community.strip():
             params["communities"] = community
 
         try:

{tooluniverse-1.0.7.dist-info → tooluniverse-1.0.8.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: tooluniverse
-Version: 1.0.7
+Version: 1.0.8
 Summary: A comprehensive collection of scientific tools for Agentic AI, offering integration with the ToolUniverse SDK and MCP Server to support advanced scientific workflows.
 Author-email: Shanghua Gao <shanghuagao@gmail.com>
 Project-URL: Homepage, https://github.com/mims-harvard/ToolUniverse
@@ -35,15 +35,21 @@ Requires-Dist: faiss-cpu>=1.12.0
 Requires-Dist: flask>=2.0.0
 Requires-Dist: chemprop==1.6.1
 Requires-Dist: aiohttp
+Requires-Dist: beautifulsoup4>=4.12.0
+Requires-Dist: markitdown[all]>=0.1.0
+Requires-Dist: psutil>=5.9.0
 Provides-Extra: dev
-Requires-Dist: pytest>=6.0; extra == "dev"
-Requires-Dist: pytest-cov>=2.0; extra == "dev"
+Requires-Dist: pytest>=7.0; extra == "dev"
+Requires-Dist: pytest-cov>=4.0; extra == "dev"
 Requires-Dist: pytest-timeout>=2.3.1; extra == "dev"
 Requires-Dist: pytest-mock>=3.14.0; extra == "dev"
+Requires-Dist: pytest-asyncio>=0.21.0; extra == "dev"
 Requires-Dist: requests-mock>=1.12.1; extra == "dev"
 Requires-Dist: black>=22.0; extra == "dev"
 Requires-Dist: flake8>=4.0; extra == "dev"
 Requires-Dist: pre-commit>=2.0; extra == "dev"
+Requires-Dist: pytest-xdist>=3.0; extra == "dev"
+Requires-Dist: pytest-html>=3.0; extra == "dev"
 Provides-Extra: docs
 Requires-Dist: sphinx>=4.0; extra == "docs"
 Requires-Dist: furo>=2024.8.6; extra == "docs"

{tooluniverse-1.0.7.dist-info → tooluniverse-1.0.8.dist-info}/RECORD

@@ -1,35 +1,43 @@
-tooluniverse/__init__.py,sha256=V8tmwPEEdlQ6H7WItWDVW0aiqD-xG40RpbsBV3VZqPI,16819
-tooluniverse/admetai_tool.py,sha256=nEfq7dwvFqjDryKv3nivGoBSRap6LT7_m76iMu72Q6E,3009
+tooluniverse/__init__.py,sha256=JlK1_ZXAVh6blkJ2VRWSaedO3usOD9XwC1bvTOGZhFs,17138
+tooluniverse/admetai_tool.py,sha256=pZJ8ictFDE0GMFI2i-jMGVWfbO6bTUYnDDLDMfMotnA,3175
 tooluniverse/agentic_tool.py,sha256=i0TEs6WhF21B4gs5k7DM67qTND4qDMPD2lUzLyEWnnM,25627
 tooluniverse/alphafold_tool.py,sha256=NkKQttC0MfuetCTTcWTFEG2MdhyKwy3jb5TR4odiqAw,4658
 tooluniverse/arxiv_tool.py,sha256=60e5moGt3XnwZeKx_nrvRZrwAavE11ok0j78AI5F6Xs,3610
-tooluniverse/base_tool.py,sha256=wX2D5JumEhYmpqOQRjjtLW8AzFTkutpvCGo3j1IvECo,11174
+tooluniverse/base_tool.py,sha256=zagthjIceQN0F32pDhKE0uCqm9uqVEDG6OZgSIbNCRo,12479
+tooluniverse/biogrid_tool.py,sha256=tszza6Kf1-PKsoVw5GIqLak20FvhFY_PFSVY9XxDuIQ,4274
 tooluniverse/biorxiv_tool.py,sha256=uffhxXMOWR6b2jzxka-Qss1LjliQTuX-skIIc7RAaPs,4133
 tooluniverse/boltz_tool.py,sha256=Kfcymeu6FRRpWLw7dWhEON4PUBTsHuBiTAPJlYH5ZGs,7930
+tooluniverse/build_optimizer.py,sha256=UReMfhTGhGJqcEWdH6d5xfI-y3zJlaNfsei7qXxeCN0,2832
 tooluniverse/cellosaurus_tool.py,sha256=W_npl3ga45-Hpsdq7YyGsD5_DnR2AmyaQVYNjiZoNOs,47902
 tooluniverse/chem_tool.py,sha256=tJusjamWNp0x8Ke-cvVgKB7-clvD6LXTaXA0Q0fqQv4,8336
+tooluniverse/clinvar_tool.py,sha256=2NKPKC3b3eBzuwK0yc65bzPuRF4I-Jv_KjsVnBdiE6M,2945
 tooluniverse/compose_tool.py,sha256=f_3X_fbdrzogBdKJXoXXpxVvdb1OWt7KMxhpPUtEu24,17109
 tooluniverse/core_tool.py,sha256=hHD8nVSIy6lK2vF3ygKz73gsDEPYEL-otXZXeR7M2SY,5083
 tooluniverse/crossref_tool.py,sha256=oba0kkWI9m9dugf_th1nEXPWPF4onJkFUyhp5h5H4pM,5736
 tooluniverse/ctg_tool.py,sha256=3nR_F-YGpxVmTa6u5xi-mrTmLSH7OBehP4EJo-CQS0Y,46053
-tooluniverse/custom_tool.py,sha256=w2LMMRT82byxSNYPBKmuEJ2lbKktDJt_iW0Ew24M5VY,2701
+tooluniverse/custom_tool.py,sha256=cUX16ADw3vBtyqb7cIBpgHo_-CjVnkAPPQhw9H0k6T8,3793
 tooluniverse/dailymed_tool.py,sha256=sxIs0xYwX0CVlkhHaPwvGV-Oo1OW2tvsWZypAWujt9k,3800
 tooluniverse/dataset_tool.py,sha256=cmcCz_SFs7V78EZDNLesnQ2Qe9fVz1jOLghrpwe8hM8,11371
 tooluniverse/dblp_tool.py,sha256=aPyEivx5TYUxws7zOsHswQtkVphblMsVPw0lSpyoIQA,4488
-tooluniverse/default_config.py,sha256=81nZu2AiFaXXKCNLeunY_T7GpO0z_SuFHSHQLGIf2_4,9103
+tooluniverse/dbsnp_tool.py,sha256=xOa3t7YdZlnhZ146fDS13Yx6Qo0eiJ7BO6zPQY41WQ8,2188
+tooluniverse/default_config.py,sha256=cI8Z7seXqxDdIYFbIuIU9vXprNRD3ca4rTJTFAH0zsE,9384
 tooluniverse/doaj_tool.py,sha256=mzpnUwYfXdqvyn-txbV1cdWNS7Ty8g6fbvWgF2JN30I,7032
 tooluniverse/doctor.py,sha256=QQ6LiV3HPkWljVKh52QptQmV3xFj53_2yo-A_n8NQ5Y,1326
 tooluniverse/efo_tool.py,sha256=J4tjPFlNa9KhmQTEToBZN-m8jMuF1IKf2yQb1dyTeXI,1394
 tooluniverse/embedding_database.py,sha256=ua-yIyv3dPq2GHdyZmiwZyaUlkKYyV3nslB4H9asvDo,24682
 tooluniverse/embedding_sync.py,sha256=Cq3g64MjNXXpiImrzPMNsCTvGZeEI9009OlHOD3EloI,14669
 tooluniverse/enrichr_tool.py,sha256=YXuHwoG_Hi-kUWK7cY_X21b5pbqoREdG7fJxKq050Jg,9472
+tooluniverse/ensembl_tool.py,sha256=i-kYliN5juitLTJqGiWcm7RXFV8k29XlfNBUC1Y1Z-M,2195
 tooluniverse/europe_pmc_tool.py,sha256=-3CAq5tDhS5NoeHifevadBgP_MHDZJdwNmM5SvjbAa8,6080
 tooluniverse/exceptions.py,sha256=3svVCG7H_G_8E1mco74KWi44u1M7V1JojVycSEWdi_o,5386
-tooluniverse/execute_function.py,sha256=Lj5v3t23An6FNbfGZxUMdkfqOF9gqzMVrZbzuiCElG0,101216
+tooluniverse/execute_function.py,sha256=M2tjcwhYzIoLwyFrTY5JcZ6lcweWdqJCkYH6Dxhfuu8,106091
 tooluniverse/extended_hooks.py,sha256=1Cg0rETh6_D21YFVqD-FhL7y4inZAGyQ6vMtHyugueg,15376
 tooluniverse/fatcat_tool.py,sha256=-QEOYbv6KEcrOiOa27Ms1xm0sySB-vW4rWEinsS6EDw,2051
 tooluniverse/gene_ontology_tool.py,sha256=l89XYdBEBm3eN3dG0lR4oV01H16_9IUB6a2c7W_c7Lg,7180
-tooluniverse/generate_tools.py,sha256=9AuQmvW8874Br7gDSSrpyAZ1xjV_4gN78qtGu7VnsWE,5705
+tooluniverse/generate_tools.py,sha256=rx-FMNPBSZ0_lP8yNNsW9BtBtT6WtORGuEK-kJVRKic,15226
+tooluniverse/genomics_gene_search_tool.py,sha256=beK6mJTBBvXb9TKF8piYoq-plpm36DETl05SRMFjDNg,1953
+tooluniverse/geo_tool.py,sha256=t73P_rbeYE_NeDEVkV6_1wYV_PYGgK8gFTINxOwu2e4,4136
+tooluniverse/gnomad_tool.py,sha256=imVgxNiNHfQSdOiDj-Ub1gKIGj1XEVnSoTSL18NY5Yk,1817
 tooluniverse/graphql_tool.py,sha256=y7ztNyb9hn4OdSGKhLsHev_snkNgbAwJZL8ZGHm0LEk,8980
 tooluniverse/gwas_tool.py,sha256=hq4VhB93DhczZo0xRGjGS9AtdKWL0O_XQy3eoV_fi8E,12351
 tooluniverse/hal_tool.py,sha256=HrU27B6TK_gMtk8tjafpVkpD1ABDlCOo1bsLmBNhaQU,2485
@@ -37,7 +45,8 @@ tooluniverse/hpa_tool.py,sha256=siRA0usQ0Rggloy3VL1b56QlytabndXS8Xzc9H3uWs8,6499
 tooluniverse/humanbase_tool.py,sha256=xojNboYvFrW_LAzOzKaexp6tvyGSbUazpMfOvX5ETXY,15006
 tooluniverse/llm_clients.py,sha256=6EAhxUmEpdKYjWMG6S0Q57mdp1JuCPxPehIudofCPzA,30484
 tooluniverse/logging_config.py,sha256=SWM8TCrv0RZJZbC8NNwy8h04V9BvqSVyzwJFcW43eFI,7212
-tooluniverse/mcp_client_tool.py,sha256=R2WWAbnjzCFEKfeddTvtZTSZqtnvKRayV2ha2xdV9EU,28741
+tooluniverse/markitdown_tool.py,sha256=bnUA0Sw8KjVygqf8F6k3ATY7K23NWFqycnnfs9mm5qQ,5492
+tooluniverse/mcp_client_tool.py,sha256=1AxczGYkW6kMynLwz1WLzH3KoIKM2cDQ9WMUTOsejTo,29053
 tooluniverse/mcp_integration.py,sha256=9VtFDFbcVIuKO_sd1gFrOd-R0r6uxlYRjdsOKiqV1zs,13912
 tooluniverse/mcp_tool_registry.py,sha256=GsTXbGbMGo3oXtoHSFXq_4p6XieZhzm4mHP82fNoRok,31844
 tooluniverse/medlineplus_tool.py,sha256=__D7W2Khl05WllMnoV4Owv3pyl5EXS1lzEJmAE7PbD0,13214
@@ -63,23 +72,29 @@ tooluniverse/reactome_tool.py,sha256=ngmJXCcQfsu5d8XcX258ZHW4DIBi45sSjYNwUBk8nxo
 tooluniverse/remote_tool.py,sha256=ywb5xaJBqOT38_r5FBVoF3QFQDcLvfOH5AQrT-g7Fcs,3368
 tooluniverse/restful_tool.py,sha256=H7alq_vO3G4iVgZIZrrWh9vq2ForJN52Fl7_QOq7yaM,4409
 tooluniverse/semantic_scholar_tool.py,sha256=gaDDL5Xy4Ij3qNqipZvwRfOBSyzGyIN8AANT-pYKHvI,3227
-tooluniverse/smcp.py,sha256=ZfGrruGnPyC_Q11hKNc_NEeOly51PdqV1MD8sPpuwoM,103674
+tooluniverse/smcp.py,sha256=HO6ACPQzqBqLYEni5ZGI6W3V5lL3BHBuRRhh6r9hKVQ,103751
 tooluniverse/smcp_server.py,sha256=SAItoFvUsVwGktRZBqMvHRZrHAdVGOmgxetgA0IwyAQ,35960
+tooluniverse/string_tool.py,sha256=3rio0Lt97FuU6fbpykq3ETqD9pA4h_gPR0uXKRb7Zu4,3936
 tooluniverse/tool_finder_embedding.py,sha256=O0WMCT6z7a_pDDew04QtpyPk_qzfGCX_647rsrBs0ug,11239
 tooluniverse/tool_finder_keyword.py,sha256=_Nt4-C1RranoywTk8vi6MePWPoNqFwOhafMDiTYl_SU,23480
 tooluniverse/tool_finder_llm.py,sha256=W63BDow6ioWQJgkpuhS3f0f4lb48uT_Jzc_bTqhBKE8,27361
 tooluniverse/tool_graph_web_ui.py,sha256=68s1MPXTcT6bzdFfuat9gvSNjSgwHxNC-TztfH3raeQ,27987
 tooluniverse/tool_registry.py,sha256=DYA97MzFgIZ_8oAy0CTqg99pfz_bIS-0A-gbyLkiQuw,15616
-tooluniverse/unified_guideline_tools.py,sha256=q8XTctQ8fu3aiqpAaQ163aMyOQ2WUsZT6kF1ariZPgU,44819
+tooluniverse/ucsc_tool.py,sha256=0ZB2otPTfUYz2VxloC6OZXu2657sWWcj0mb0a3AvcjI,1879
+tooluniverse/unified_guideline_tools.py,sha256=Vhnqis4je3JZDJb7KfynAMX2D2yvW9I71_9mIsG1COU,88376
 tooluniverse/uniprot_tool.py,sha256=oIy8O0tHQWgb1rAtxTGZfXEVJLLRM5fFVe2SVc5OpNI,6231
 tooluniverse/unpaywall_tool.py,sha256=eqdsZZMRCOsMQjMzJRzkNk9xSwIWlsRrrPiTrIBDsFg,2070
 tooluniverse/url_tool.py,sha256=8dY1Uoq0VHPwaBN7Z3Kw9ceNyCPO61FLexAmhHsKCUI,9018
 tooluniverse/uspto_tool.py,sha256=lelrwFaMen_0O3U86UoY-xcZ5pLH9Cwk1kY5iYD1AcE,8992
-tooluniverse/utils.py,sha256=b3JUNmfInFaiDsx9MvXnb3PLu1UNzl4xmFhSrGpGqP4,18955
+tooluniverse/utils.py,sha256=9ZjQY_zp1Alfulpyt8bpoJ7n_d0y2IxBaxLmorp7BSw,20697
 tooluniverse/visualization_tool.py,sha256=A0sIf3n4_SUbhc-NwNdVtC0rNRwNxbeHonPHUCZYM-w,32653
 tooluniverse/wikidata_sparql_tool.py,sha256=CjOuMKsGOFJB2b5qJDimhgYqI_-Yl-RWud-maN0GMNI,1987
 tooluniverse/xml_tool.py,sha256=ynv6NEU-QTSliB9P02qnHxoxIGeRu7Bb-KHOmR0pN24,14671
-tooluniverse/zenodo_tool.py,sha256=S2S6OAFY-GFrBQmyzz8AahpqV29qiwIqpsTEk1ApCG4,2336
+tooluniverse/zenodo_tool.py,sha256=Ea5Za8A9uELJ7sL4pk0CerIke2ulvM590b7XjudwYbo,2435
+tooluniverse/cache/__init__.py,sha256=laKHcIpRjv_mJ8SkIO51-vYn0C4_9EZgHXeODeg818w,108
+tooluniverse/cache/memory_cache.py,sha256=MxfjdCL8O89q2lzs1M4hgVDStU2-eOlafrmvUS5Wh9Y,2757
+tooluniverse/cache/result_cache_manager.py,sha256=NagKpT_f8BX1eX4RGAGHLlAuA6NjG_IOOOFWCFkk4T8,7653
+tooluniverse/cache/sqlite_backend.py,sha256=D_BnyTld9oONmOuDKWyiy8pmUMO5VCb4DAAK-ynY_uE,8161
 tooluniverse/compose_scripts/__init__.py,sha256=8e9aVruvvUQxLSuPEgcrljS-f1fJbnIwB6XKb4ZeWn0,41
 tooluniverse/compose_scripts/biomarker_discovery.py,sha256=Im7SO1boySOVAcOz5JtuNw5Uo43i4SLBVgDRyXUke2k,13173
 tooluniverse/compose_scripts/comprehensive_drug_discovery.py,sha256=k5aoTkC5bTneM9asOuYKz0dCwewVv2kWOXUdS_CAoOc,8588
@@ -98,24 +113,25 @@ tooluniverse/data/admetai_tools.json,sha256=08LCNSCZJxL6ZuPF1mVfbdlh9f2X5tnEwIYU
 tooluniverse/data/adverse_event_tools.json,sha256=EDU_X8r4YtMnVt7SJpyimdo3FlcSNFSdvckWLShDODA,12752
 tooluniverse/data/agentic_tools.json,sha256=GlY5yi7NX16iUfPElPyfLLVJMO4vipkr0Nb8g_On4Wc,95981
 tooluniverse/data/alphafold_tools.json,sha256=bNFUKlidqkAF9euRJxX2XXXZ9YfnHg1laDekumH3RTU,14167
-tooluniverse/data/arxiv_tools.json,sha256=P-4HeGv2j-uhDUNwfw_tSzl5Nd0j5ZVq8levhRxEefw,2649
+tooluniverse/data/arxiv_tools.json,sha256=v4FNgFMhNX2WBNajje1xpa5250kvifm_RXY1WzPGgFw,2591
 tooluniverse/data/biorxiv_tools.json,sha256=i7iNyLJDRCPlNd6QjQ9Ml0rUwkcBPjXLG3QOa6cT2sI,2007
 tooluniverse/data/boltz_tools.json,sha256=_pMSRBkO3uj4vjYnQ7H6qbZFa4rzc9Looj6zHRyIkMg,303
 tooluniverse/data/cellosaurus_tools.json,sha256=JLn0d5BAj9U5bA2Soy9PRsfO4EeSLOK0nlYT_HCJnio,7388
 tooluniverse/data/chembl_tools.json,sha256=e7l7Z2r6EM6QL_DL6UEdtJ5BTJysebxgSZBixeKEL3o,850
 tooluniverse/data/clinicaltrials_gov_tools.json,sha256=2trH2fs6iKrJrazSiNp-nxbTjdjpSohlOpdM4uy8BMQ,14321
 tooluniverse/data/compose_tools.json,sha256=SYwoNb03pP0Yn2BatqdLpbVR0ghRKs-rmwKCgu11-sA,13417
-tooluniverse/data/core_tools.json,sha256=bve7CCyW0eFVAKwFbxctXI7hHpnbeUwqQUcoLVZ54dM,3521
+tooluniverse/data/core_tools.json,sha256=UB8aFpPZ5MVIju0OrfjQcJQedTPwCcVNqYNhPs0FmLU,3461
 tooluniverse/data/crossref_tools.json,sha256=oUXs3xHmNBq2ugsjpmQsY1JTRctD_NF6Qx6Yg3I82sk,3975
 tooluniverse/data/dailymed_tools.json,sha256=rWi5pV8EmITq0UJ-MzRQDVzKA2XVmR7v2ItFHCqqdSY,2288
-tooluniverse/data/dataset_tools.json,sha256=Xw06GGpGpmtZ2RAX7XSZYoZsOouBSA9rKAt8so9fsuQ,30446
+tooluniverse/data/dataset_tools.json,sha256=BKf0HAQC9r499fL3S5s0aH0FyDC0V2vawo5uqXvYwQY,30313
 tooluniverse/data/dblp_tools.json,sha256=_D5zz8ChRJK7XE_YQ2TOrYRz5kFTiuSIkdtKswk7NUQ,4202
 tooluniverse/data/disease_target_score_tools.json,sha256=Z0-Uc_tZG83ToTIQvxe3cV5I2P6xh7eTq0aUpmGmxmo,23399
-tooluniverse/data/doaj_tools.json,sha256=0TojRGD66ji1OiFSA8UiVJDFXCiVdw7GjRNJNNw-OLg,3954
+tooluniverse/data/doaj_tools.json,sha256=P2A_UM7TdJyEO3gM-TH1dK1ehWKigoTWvxTD1pUTyCY,3915
+tooluniverse/data/drug_discovery_agents.json,sha256=QVktmkrTvSEZn8CifczXtiGRYNxZ6yITf5M253uJ6VE,18672
 tooluniverse/data/efo_tools.json,sha256=qsEElKp1Z4EX09OD4r1ETcw6jT2t_w32SlDz-v8RyDc,564
 tooluniverse/data/embedding_tools.json,sha256=PKIinGNbM7O2sH_7qFoT1TWkksDtQlk-8sNZL3-_ajM,11393
 tooluniverse/data/enrichr_tools.json,sha256=zUUMFMphgyzX_0xJYK8KDjnFTp4_eoaUN5ZCSyh_7as,1162
-tooluniverse/data/europe_pmc_tools.json,sha256=5mbtfisz_8p1oNgt9nXB7S_MnwUdCKrXMvBfW2mrDe4,3358
+tooluniverse/data/europe_pmc_tools.json,sha256=ihqstPZ1FXDya8IHwBm6jSWm6o0pm15zkj0-fzT1nuI,3341
 tooluniverse/data/expert_feedback_tools.json,sha256=Uq3pit2dvffLWl01ycJiFh7NSMVE9Ol7qUMWjGwUvYw,453
 tooluniverse/data/fatcat_tools.json,sha256=Z4TpQlS759MtuKFqClyVMdRhR_jbYGI3l5xWyRLEBCQ,2164
 tooluniverse/data/fda_drug_adverse_event_tools.json,sha256=ML5wuKilqfS8xQcJmWpPCGorna-LV8IFcIaly8HsSQ0,29932
@@ -123,12 +139,15 @@ tooluniverse/data/fda_drug_labeling_tools.json,sha256=qLoAWPTDEfXjBWikNKsGlIwu_f
 tooluniverse/data/fda_drugs_with_brand_generic_names_for_tool.py,sha256=TlXXiMI1FUwXxX2pZW0G4vrZ5_10Jg03qDnL8BzUZXY,6009537
 tooluniverse/data/finder_tools.json,sha256=PnSZk3zvxwNfBwKyb7DeWiNX6CO_DKmmf2fWsFM-hnY,5693
 tooluniverse/data/gene_ontology_tools.json,sha256=tUujN9UBOZM9vFdnR0Yno7cUtqfBYFri5cvErOg6QF8,4361
+tooluniverse/data/genomics_tools.json,sha256=2Ph0Tw3TsqY0UXi9yjL31jhZUE4zqJUmaqow4li2V7g,5962
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 tooluniverse/data/gwas_tools.json,sha256=XzRGrcasRhahnJikNVdmJQ7uRvffxunEVyPUtX2Jnxg,51857
 tooluniverse/data/hal_tools.json,sha256=6-Zk7KKZQDY6w08ixZmNKba6U3Ky1aE1rfsEwuBmf1E,2005
 tooluniverse/data/hpa_tools.json,sha256=q96siPOkcEgKjO3VUvdJ3FF5wRr9WR_6rlZeIpHCwVk,17997
 tooluniverse/data/humanbase_tools.json,sha256=bhe5qVwkbFgq5aGlAGgYc4FiLX46YIAjJcqLXQZvhC4,2239
 tooluniverse/data/idmap_tools.json,sha256=ApTXD6RaR7ljIBtHYwHxnvvjuDL8Gz3E1vj6TxNV74s,2830
 tooluniverse/data/literature_search_tools.json,sha256=uOeAAcufsp77wDYqPoPVjYvlxGYYPYohL3eYry4-10I,11229
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 tooluniverse/data/mcp_client_tools_example.json,sha256=5Ug57s25IjvMg29_vOpe4TsVsr0JQdtbwa0nhmj6Mh8,3435
 tooluniverse/data/mcpautoloadertool_defaults.json,sha256=I1Z6Xnno6BRX7u9Ec4LlXlz-384GWpaBafPVHsqTr_c,998
 tooluniverse/data/medlineplus_tools.json,sha256=J1pE-5nH6LGuZP4lRmiOiec_pgr8Vtg1C9jYfY-gt6c,7711
@@ -138,31 +157,32 @@ tooluniverse/data/molecule_3d_tools.json,sha256=IVmxcynWJdMNDcRIWpS1YrlOQ3iHDSn1
 tooluniverse/data/monarch_tools.json,sha256=7u_Mx_kUZ7NckAIssG7ek96jyWH5vTCXVgRuCWfRggg,2750
 tooluniverse/data/odphp_tools.json,sha256=9EeqOA2eu54BoDMVqGZkBNcRiTSCFYrNNfW3BhopCsI,19570
 tooluniverse/data/openaire_tools.json,sha256=-epEkMGactUo3BNYQg7ZA4P4mrCQYyOjszkOsxeYPTA,2771
-tooluniverse/data/openalex_tools.json,sha256=M9hziIE4R5DmHa9IKf65s2lU1sLkyh453xDbmlUWgWk,3373
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 tooluniverse/data/opentarget_tools.json,sha256=ZoUvHZzs9lTmZVuCgSR87AkiQaZUczOWsMBD84ReBwo,59067
 tooluniverse/data/osf_preprints_tools.json,sha256=KO03NqtCSF3e5ttk0ioTzdSSltTwb6lFVHmWwqY0ewg,2341
 tooluniverse/data/output_summarization_tools.json,sha256=9BxZAkzexsDp8jGMKUHW3LIRThZjleRjYRvk0y-bxEs,3944
-tooluniverse/data/pmc_tools.json,sha256=-l7Y_jrhgstuagK1DMG0QLslv26_RFwTAM5t9SnT2Qw,3709
+tooluniverse/data/pmc_tools.json,sha256=01RsH8y6wF8CdX3hQO4qqTgyGDA7uoJ4bD8H4Ss5MIs,3645
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 tooluniverse/data/protein_structure_3d_tools.json,sha256=J_BOw3lS8_mAkFxvFSQ7hsxRhtQwMwBdXYk_QNs2LOM,3924
 tooluniverse/data/pubchem_tools.json,sha256=gcUjjEPHmmBLl2iiopSXYwUy91ywKYnPs64crgZkFYQ,12918
-tooluniverse/data/pubmed_tools.json,sha256=cWtgNicQFN3u-VjyJ75QdNl4HEVm5Q4spJ9CoriJRyk,3850
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 tooluniverse/data/pubtator_tools.json,sha256=rxqeWJu1oCYgeakm6NLEWXu3eCs7TLqgvXyb4nOIqhU,2494
 tooluniverse/data/rcsb_pdb_tools.json,sha256=rhMg9GztmbBfJUYcvs4_9-BZIMsNZYljSYfSISo8R7Y,40536
 tooluniverse/data/reactome_tools.json,sha256=h8Ubkllr4LMFc8UPUFQ8SZf_-wdWdh_NaHAKhx31Db0,557
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 tooluniverse/data/special_tools.json,sha256=nlhyXeqAnzH90GaWxnTptktAcPkZDj5wczzlsgy5bUo,1025
 tooluniverse/data/tool_composition_tools.json,sha256=HyDz7wxmOnu7VnpRqAA6S9BLUkKbxlFMkwwjc72EJz4,6118
 tooluniverse/data/toolfinderkeyword_defaults.json,sha256=bydTVd0IUSDiilNQ6kZU-cn4lPqOfInfUAxhh8yMXqY,1050
 tooluniverse/data/txagent_client_tools.json,sha256=GdQk5H6uP_Uj9Ejz3nMdzNhZJV42t75aiRW8oWtkzRw,409
-tooluniverse/data/unified_guideline_tools.json,sha256=g9Ai_upjfsskJC7xA2SvS_gKIfwvwWxL0cF6NsmuNZA,23671
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 tooluniverse/data/uniprot_tools.json,sha256=eiRlXBTB3jEboF2eDFFgvI14gDuHD0snOr-sm5ouQfo,8046
 tooluniverse/data/unpaywall_tools.json,sha256=7ciTSVOeaCwmIA88Lrm_t17mNDqCxPZMtI1pHYsaRco,3123
 tooluniverse/data/url_fetch_tools.json,sha256=Z_wFzpj9XLUnrELk5KLFpj5pvxifOy2JepPhvmhVTJs,2719
 tooluniverse/data/uspto_downloader_tools.json,sha256=hMHwvP_hvuFg-upZAAXufywYKx031iQ0xuMyHfzu0uA,349
 tooluniverse/data/uspto_tools.json,sha256=yPIMBbwGNaAj0XbHBEGmcRDC8yeE-1OtyNceilkiFyY,32182
 tooluniverse/data/wikidata_sparql_tools.json,sha256=HPHrVszbqZdSGxxdq249N6gFSFe8XW-_pXIXdapfqAE,1830
-tooluniverse/data/xml_tools.json,sha256=RGP46mMsO2Bp0iNh7YbjZKgjyDOyd-mAzxpEio2ofzU,112048
-tooluniverse/data/zenodo_tools.json,sha256=i4K3GMDdlIm0H0vqSekQb7hmkMChGk8q6yAL_MgQve4,2584
+tooluniverse/data/xml_tools.json,sha256=C950u2om1lIOeUu2c5MnVWJccVGzjwDdjmelXqfcmz8,111763
+tooluniverse/data/zenodo_tools.json,sha256=iVjjuSHDlbDUCxROPqzbNASkvSGCVj1hXhq56Qd1aC0,2563
 tooluniverse/data/packages/bioinformatics_core_tools.json,sha256=D4RHSmDpcsfkwyjEsKMCIbR_YOa8HYZE_ll0v4h6umY,165313
 tooluniverse/data/packages/categorized_tools.txt,sha256=NweDa6MbgS_4480RuNk-sw9LaxyA05VkzSgIRfvYkLI,4823
 tooluniverse/data/packages/cheminformatics_tools.json,sha256=FSE7aM-Infrc47YjlebEfwsFLQuT0f4rhBfVhPCxI9E,31125
@@ -200,33 +220,42 @@ tooluniverse/tools/ADMETAI_predict_physicochemical_properties.py,sha256=iCjTWSit
 tooluniverse/tools/ADMETAI_predict_solubility_lipophilicity_hydration.py,sha256=YYEbi4SrxVDM9F5dFJ2AsJE4TnE9A1LNJn5jfVNALQs,1328
 tooluniverse/tools/ADMETAI_predict_stress_response.py,sha256=bnNhfgOK45oBVlS5SBECcfp514GMaKyN5Ffqq2y_M2M,1217
 tooluniverse/tools/ADMETAI_predict_toxicity.py,sha256=cPw6SFMkITEgHJUkU5oVZakITA6q9UPpjVcx3oEBD20,1189
+tooluniverse/tools/ADMETAnalyzerAgent.py,sha256=rbQmQQ2tAn4lepHCyyoc2TAEV5HERXaUC3Sg86ynDDo,1537
 tooluniverse/tools/AdvancedCodeQualityAnalyzer.py,sha256=Oi3qkPEdgv_Kun0G8yq-5HOD1Bp6yCD3ZyhAGUBIQMw,1826
 tooluniverse/tools/AdverseEventICDMapper.py,sha256=luvwV-jU6hlJ-CZ-ICKYIcv0iRADjWKbnYiKtrl9AqY,1218
 tooluniverse/tools/AdverseEventPredictionQuestionGenerator.py,sha256=byf23PcHTwqn5nwycNkbsaZ6vX8rp8pflioYVnMv9-8,1402
 tooluniverse/tools/AdverseEventPredictionQuestionGeneratorWithContext.py,sha256=bOs5PwUEQVjn8lASU5FQ6bgX0RXwDRQnV9BciVwT9tU,1702
-tooluniverse/tools/ArXiv_search_papers.py,sha256=pjGiayySavqlRNXyb6I9781lSBslyPGjvkJAr6jpVfs,1741
+tooluniverse/tools/ArXiv_search_papers.py,sha256=ccmlX1IUWgK5g4q7KvgXwdS8oZllYNuAhzaVga_2kGc,1805
 tooluniverse/tools/ArgumentDescriptionOptimizer.py,sha256=GW5UUyWWu2gMBdQVuZH-wFzFD_yqE_5tNIFRVtNcZp0,1529
 tooluniverse/tools/BioRxiv_search_preprints.py,sha256=Vwiu0DIr9GtTU3g0reO18u2qnPNLOHAxgJbiDoUZ8hw,1423
 tooluniverse/tools/BiomarkerDiscoveryWorkflow.py,sha256=AEbqIXCBb2yDj2zOIvVLeYGNmg0XV_iRDfh20Rf7nsk,1510
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+tooluniverse/tools/CMA_Guidelines_Search.py,sha256=glO3Ro-ZzU-PKcrZyZymoknO3G7IuaDiMavRzCsXpA0,1370
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 tooluniverse/tools/CallAgent.py,sha256=jtiz5hbHrMR7-i_LmV5U6N5A7Gl5D2imhTXsTdY3ivY,1161
 tooluniverse/tools/ChEMBL_search_similar_molecules.py,sha256=E2c2TEolhS2Sx_ZxfjzBFE1m7HbDHLgJcqkkeFR9Zt4,1588
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 tooluniverse/tools/CodeQualityAnalyzer.py,sha256=DDMCOjAg923g5OfXMatV1qC97vY4QCr7e_5q3OUV1FY,2100
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 tooluniverse/tools/ComprehensiveDrugDiscoveryPipeline.py,sha256=CNzlyzoXCmhcGQEfTMBWBRG5lTzOcScPGRwnrX7SpXA,1337
 tooluniverse/tools/Crossref_search_works.py,sha256=xdpN3n3Jh90kY3oK9kfBp1waa6SDIiWbl8XnMVXG_ZE,1539
 tooluniverse/tools/DBLP_search_publications.py,sha256=W5mCgEvDb9dTMTS3Bqo2VwLLF7_ipZpCYLBhhIcMH6A,1410
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 tooluniverse/tools/DailyMed_get_spl_by_setid.py,sha256=Udq5P6sqdfXmw8CMT8zOiSJew8Ar5Bbge3a3D7SBS8w,1273
 tooluniverse/tools/DailyMed_search_spls.py,sha256=Rx1AWvE6LtBkWJin_nAQmFiL4yrt7UdFJnlk6osHELE,2165
 tooluniverse/tools/DataAnalysisValidityReviewer.py,sha256=1BHF1m3tz-6HvdruKO6o-b-oMkzOlI9gqxvmwg7muwY,1183
 tooluniverse/tools/DescriptionAnalyzer.py,sha256=-9iv7iTjmAOVT79fmWIews93Y9QvUQQsuv9QLl0Fm48,1454
 tooluniverse/tools/DescriptionQualityEvaluator.py,sha256=lS6q09UlU-zfMLULxVeT3diPh-CVlaaWFi7WNN-ZRew,1638
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 tooluniverse/tools/DomainExpertValidator.py,sha256=keUnUpiCbSFXkht0ReB9jR4YuW1Tp5x0I1t_D16RGOg,1804
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 tooluniverse/tools/DrugSafetyAnalyzer.py,sha256=IFJX7y3tns5z92Idcc1bwpZtsR-sPR7HM8Vk3AnAi3U,1527
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 tooluniverse/tools/EthicalComplianceReviewer.py,sha256=EVXz9HnWfvrQbupbfiJrCmme7ARbHmEelRQhzFrmgg4,1139
 tooluniverse/tools/EuropePMC_Guidelines_Search.py,sha256=I98jWX649a3TH2fvN9JLMfqlGpjXM-NX1qGcKdJZGDM,1404
-tooluniverse/tools/EuropePMC_search_articles.py,sha256=iQkrDOpqIRle-u9zfGQy6CvVsO8W6FaL5clKU_onewI,1414
+tooluniverse/tools/EuropePMC_search_articles.py,sha256=ZUkvztEcwCYGxYMvu161sgOAmtnXrfioJhpr6-LcFKc,1428
 tooluniverse/tools/ExperimentalDesignScorer.py,sha256=53LkLDhspghUIWAHh-SC8gg8M4HEi3rrHSFOaqS_wHw,1495
 tooluniverse/tools/FAERS_count_additive_administration_routes.py,sha256=2AU0NSC6wEnEG6gkuIPyNL0sk-VpNaDpsQ_4iT7CTMU,1433
 tooluniverse/tools/FAERS_count_additive_adverse_reactions.py,sha256=kKlGnaQUBTXEIGduzkL00b9U0wOCcLkoTNl6OUJ1xkI,2021
@@ -401,11 +430,13 @@ tooluniverse/tools/FDA_retrieve_drug_names_by_patient_medication_info.py,sha256=
 tooluniverse/tools/FDA_retrieve_patient_medication_info_by_drug_name.py,sha256=K2Fj1oGA4LQPclEh1tqvDTffr_SjwX-n-N2kOSlr7ZA,1520
 tooluniverse/tools/Fatcat_search_scholar.py,sha256=vTACYib6eoOBnwjVg-m1Mb8WBWuqg5ilrvfZvKWIbrM,1409
 tooluniverse/tools/Finish.py,sha256=Z_8Ze13kZ_E5xtNpUHGXNOGzDRuMQGB6FXDbj188v14,919
+tooluniverse/tools/GIN_Guidelines_Search.py,sha256=2GAwy7eF-Dg_0-NeAJ5IpeoA7iTdDHJBbBNkPcM5gCc,1370
 tooluniverse/tools/GO_get_annotations_for_gene.py,sha256=-uq1qdFj6FPxK2pN6iSH62zljM15sdFpmJSIuoLb5Es,1176
 tooluniverse/tools/GO_get_genes_for_term.py,sha256=l-O3Np78CG919B9wO51WYQQlPhMmin0bKLPAVB00lYA,1423
 tooluniverse/tools/GO_get_term_by_id.py,sha256=eEsSX9ktoIImwXxg6Mo4l7Jp3s8J2pm8F0O6kcVXvEA,1092
 tooluniverse/tools/GO_get_term_details.py,sha256=TiLY5-nwj_PpFJWwz_KyhAvKvsBu2dfbEdROHrk8ttg,1180
 tooluniverse/tools/GO_search_terms.py,sha256=X9PmMw_n7BhvxdxHTZR9vbKvxtFJhkxuEF1TCw5NOk4,1176
+tooluniverse/tools/GWAS_search_associations_by_gene.py,sha256=DSxm7VWGr8yxvF-4738dYVmluYvsnHzKTwnQnr_K_rs,1365
 tooluniverse/tools/HAL_search_archive.py,sha256=HyebPBvavXKm8V23tbDIx4-54wxr5XwZaVkgxIiN3gQ,1393
 tooluniverse/tools/HPA_get_biological_processes_by_gene.py,sha256=oPAq4T1HNEOJ-XQCi3CxwhJZxd9sVByYZKPK4DNx5SU,1489
 tooluniverse/tools/HPA_get_cancer_prognostics_by_gene.py,sha256=DnQNCYQrG8O1Z4zKlwaupHKBAE-QPeMaGfCpFG7fzqw,1321
@@ -424,6 +455,7 @@ tooluniverse/tools/HypothesisGenerator.py,sha256=imtp_vMSHN-Nqz009qTWSl-HCVph2X-
 tooluniverse/tools/LabelGenerator.py,sha256=UZv9OePJIeSBAzVJFAJgSG_SsKxW5zW1n2_M0Jorj20,1878
 tooluniverse/tools/LiteratureContextReviewer.py,sha256=Be7cXlsDblIfrMaP0IxL_0OxS8RyLa_e4QvOtUlPsMs,1326
 tooluniverse/tools/LiteratureSearchTool.py,sha256=KAFmS_RcG7zxLV5M1VL2aYmJoEju_EishTmoTpuHfRo,1260
+tooluniverse/tools/LiteratureSynthesisAgent.py,sha256=HHes1D2VkKqlXVE5r_oopyz1B6tify2CDiOpnH0QOYM,1509
 tooluniverse/tools/MedRxiv_search_preprints.py,sha256=hWg-DXj-B5n1z7PgVg68H9dyOqZ2MAhTqJ9smF_jThU,1423
 tooluniverse/tools/MedicalLiteratureReviewer.py,sha256=zy9WEPalcmA_0eVUQLhHLBNcbO_xXdtgkJm3r76tWuQ,2253
 tooluniverse/tools/MedicalTermNormalizer.py,sha256=sQkC6mJaDOTRqaeYrPAutw42izpsDk1alEt4y4Pjy3U,1230
@@ -498,7 +530,7 @@ tooluniverse/tools/OpenTargets_multi_entity_search_by_query_string.py,sha256=bXL
 tooluniverse/tools/OpenTargets_search_category_counts_by_query_string.py,sha256=JjTSAWZo0TsYUp3OJ8-bPSqXu0K5R1srPhX0OWKsjQk,1346
 tooluniverse/tools/OpenTargets_target_disease_evidence.py,sha256=vygJB5wz7b7jCoUEe5yM5BKec_dztk-83JJFwA2FpC0,1360
 tooluniverse/tools/OutputSummarizationComposer.py,sha256=6cxWAMH1dl6Ha-UVYcyWfuMlIL8Mydms6jZzIWusmkE,2045
-tooluniverse/tools/PMC_search_papers.py,sha256=anhm_g4mi57gDkfXziOeMoEKuEkHIBTYExAxIdMxC3Y,1940
+tooluniverse/tools/PMC_search_papers.py,sha256=DaJf_7w8EOID9jnsgJFlYkNbwkfbrgGkn9ycDJTT64I,1991
 tooluniverse/tools/ProtocolOptimizer.py,sha256=WVqTYgh-VRq350G8viUGniuVvBPZDaIWknLJPxZ6JEg,1189
 tooluniverse/tools/PubChem_get_CID_by_SMILES.py,sha256=tv32N7mz7J3C-LLDn-QeDHhutgbrXt_QB40VGisbxC4,1128
 tooluniverse/tools/PubChem_get_CID_by_compound_name.py,sha256=zJFAVAucHNJnoRX_1ojCtzULjsclp1daeLq7x-95xdk,1152
@@ -510,7 +542,7 @@ tooluniverse/tools/PubChem_get_compound_xrefs_by_CID.py,sha256=LpuLaUpTT-aBIZz0l
 tooluniverse/tools/PubChem_search_compounds_by_similarity.py,sha256=w9d3fEKukAszGnHEBGueub4YJiXZYieIs2Wt52O_WU8,1426
 tooluniverse/tools/PubChem_search_compounds_by_substructure.py,sha256=tjFpoqofRQSCJN81NUbLiiFcxj7tECOQU96ALlwgWuU,1271
 tooluniverse/tools/PubMed_Guidelines_Search.py,sha256=gO5Lxv2W2ATDenpyXpWNXtl24WbY0LaI2sDicfDv-C0,1537
-tooluniverse/tools/PubMed_search_articles.py,sha256=dWnkgbUeu3IRmykUkfg8goCeAfGgpLOwJIF5bpeJT5g,1547
+tooluniverse/tools/PubMed_search_articles.py,sha256=LElAzC46YjylnAq_3Bms67W0bgraG4jODjfPGcrXfNM,1579
 tooluniverse/tools/PubTator3_EntityAutocomplete.py,sha256=NN4snaloj6uLUuwlEG48bXf9olyyHPsLKzo2kbWyC5c,1645
 tooluniverse/tools/PubTator3_LiteratureSearch.py,sha256=He9IQXl3etz0bVbmN7WCYFtZtGBy_BT5VSzkbnkHDKM,1525
 tooluniverse/tools/QuestionRephraser.py,sha256=BMGWA5qwTwg_rFk3MS5dd0x49n_I4y5EBArWunQJIRQ,1369
@@ -518,7 +550,7 @@ tooluniverse/tools/Reactome_get_pathway_reactions.py,sha256=Qj0_sDHfAr9QRzojIw7-
 tooluniverse/tools/ReproducibilityTransparencyReviewer.py,sha256=P8PoYdej_vt7t3_h1OqBxs7kcYWjz_qI-efwXv-YBKY,1213
 tooluniverse/tools/ResultsInterpretationReviewer.py,sha256=oVZPhI9NyA43bG817TW-8npHWQaZekMhltdXj8Jydsw,1325
 tooluniverse/tools/ScientificTextSummarizer.py,sha256=ufld67qjywZs7ZP48l78mLNnKPbDRHdqVa0tZH_2exI,1614
-tooluniverse/tools/SemanticScholar_search_papers.py,sha256=ud-6B66ewsXJAmheUjHST71Il3fESJRHBm3kJ6AcBlM,1535
+tooluniverse/tools/SemanticScholar_search_papers.py,sha256=MN7Rk7I2-AOOVmPB2xC2tCeLL2clwaYxSvkPQzFTV2c,1552
 tooluniverse/tools/TRIP_Database_Guidelines_Search.py,sha256=hMPZbDkIRvjTk1b34EwSEdH6nnqSuXt-nRP1KlyxazU,1581
 tooluniverse/tools/TestCaseGenerator.py,sha256=RofMgoFDe-Xfm6SOg4-olck9Z8I6HQqp0vQKNrj5qsw,1244
 tooluniverse/tools/ToolCompatibilityAnalyzer.py,sha256=eZ1NirvA1aIoU7KdzeZbMqBBaMHINonQLGwXM9g0NTc,1686
@@ -540,6 +572,7 @@ tooluniverse/tools/Tool_Finder.py,sha256=8FS2PFkLfhXRmxwKovjE5HqRZci8HRLCNU8pe-N
 tooluniverse/tools/Tool_Finder_Keyword.py,sha256=1ivIsXJNylYFPDJbqC5bo7oWsWOLa9N39CDceGEaDtk,1955
 tooluniverse/tools/Tool_Finder_LLM.py,sha256=kIqUNPUbRNjsM1jWqDSZ5bBd2z6f25BFVVXVrNInE9s,1973
 tooluniverse/tools/Tool_RAG.py,sha256=BVF7re1cdn-84kCtyWKYpquUaG-JyihxjFCplxx3_WM,1188
+tooluniverse/tools/UCSC_get_genes_by_region.py,sha256=_nAOBnyGUYeLTZPF0Vw76Igsqu8JHFYMfKAMbO7UuTg,1626
 tooluniverse/tools/UniProt_get_alternative_names_by_accession.py,sha256=1YlnKrFkRl4S7aU6NF67AXk1tUclGWY8j7ZWa3WdFlA,1243
 tooluniverse/tools/UniProt_get_disease_variants_by_accession.py,sha256=slx49NQ8Vjb9yMR_3XSSFlbR35SkIBhMw8N7dGG_pN0,1293
 tooluniverse/tools/UniProt_get_entry_by_accession.py,sha256=a9VOFKgjHZoJnTASgjJjRO_ZkbCW2BJkeNJ3rJQTfnw,1189
@@ -555,8 +588,8 @@ tooluniverse/tools/WHO_Guideline_Full_Text.py,sha256=GkM3_FjGc4t-VWYIdhW1t6zd_dR
 tooluniverse/tools/WHO_Guidelines_Search.py,sha256=skaP8MvndBmB8bg9HM3mQjWpFTJFLIO_cfRI4WVcSL0,1380
 tooluniverse/tools/Wikidata_SPARQL_query.py,sha256=7KoUwdza5R9uVOT6TzyU3oshRzUYDO91qqpwJA8PB_8,1426
 tooluniverse/tools/WritingPresentationReviewer.py,sha256=7OiJnRcSWjZSp1lJsM9wxBupdMAeHXNymYev-AWU-iI,1171
-tooluniverse/tools/Zenodo_search_records.py,sha256=hhTOb71icJq2kTN6kK0iglAbAasWWwb97QP0DWdrqCg,1621
-tooluniverse/tools/__init__.py,sha256=kVVAOC9gxGC5krx5pEauYwPtAe-0-K59om9OZUzNpN4,77196
+tooluniverse/tools/Zenodo_search_records.py,sha256=PfoUaXvGUCifJqFvlkFei6t8CeiT5BHuiEO7d5WApUE,1638
+tooluniverse/tools/__init__.py,sha256=6LuLnVBWoQgr_nnNxxuFzXlA75YlQFALjE0DhPhmeN4,78677
 tooluniverse/tools/_shared_client.py,sha256=USiz6n6TD5T42TRasjOvYqUvl8GnDIxzubfiv_U5obE,4839
 tooluniverse/tools/alphafold_get_annotations.py,sha256=QqykC55liO1JyPebtS_fnnAGaJ9niTgex6IL14JplIo,1401
 tooluniverse/tools/alphafold_get_prediction.py,sha256=7W9r_U6ZoZAnMKUBWWZwnaY4WVpMORJxkIdnCiXmBTo,1489
@@ -568,6 +601,8 @@ tooluniverse/tools/cellosaurus_get_cell_line_info.py,sha256=qIscXy2aT49n_Fuits5H
 tooluniverse/tools/cellosaurus_query_converter.py,sha256=QaZnONoID32c9-zeLjeAZQUfh_geG2LKg2fx5WLU3d4,1475
 tooluniverse/tools/cellosaurus_search_cell_lines.py,sha256=KBJ4fisp-DxCR5FBzcaFkn68WFhkjvd3Siy932yoV-0,1478
 tooluniverse/tools/chembl_disease_target_score.py,sha256=Zm9dbl4JVuIKjWhe42EzBNDzAc0cRlszCy7hL_btl18,1415
+tooluniverse/tools/convert_to_markdown.py,sha256=GcCsCoTKLzC_gS6CUiIP-9VdnWsF4A9VWztgQV6jD3g,1534
+tooluniverse/tools/dbSNP_get_variant_by_rsid.py,sha256=O58MhyK2XUSw6C12HTQNRqIa848pC4c7ITfE1ssR6Yc,1174
 tooluniverse/tools/dict_search.py,sha256=Ux7FL7yON8OkS9QHfpwV63NXMOea5gpjpioQ8vUO38I,1849
 tooluniverse/tools/dili_search.py,sha256=s9EsrUB8JV6oj9z82FA6TX0GL5D8CYrmj4PoL4VPxRw,1809
 tooluniverse/tools/diqt_search.py,sha256=T-vZPnXdF6VnzGEnYu9bSBkhOKXlB_POnO_cMkoC3YQ,1841
@@ -820,6 +855,7 @@ tooluniverse/tools/get_xarray_info.py,sha256=FM1FAINtYc6s_A9cW9kG77lph0b_EaJXIxD
 tooluniverse/tools/get_xesmf_info.py,sha256=qGm7AFt024R71uv6KeXJP06gKzJKtLhn987ceOFKNN8,1029
 tooluniverse/tools/get_xgboost_info.py,sha256=KGEy1aH3wIvV6WVog7zg_JcfJq2bf4Ry6frL8k7nZMg,1037
 tooluniverse/tools/get_zarr_info.py,sha256=e9x-YgEFXbk6S8qtR0tErs51FZQBLiuO4x5ywB9mBnI,1027
+tooluniverse/tools/gnomAD_query_variant.py,sha256=KI031hxoq-KaYyg_LNVYqO4Ucxd9DJyoI2ea2cFKkno,1351
 tooluniverse/tools/gwas_get_association_by_id.py,sha256=peCKnGAww2wwVVSHSuWaUbXWZ6j4NIR4-8ZjG9_hW4c,1188
 tooluniverse/tools/gwas_get_associations_for_snp.py,sha256=Zo1AmKB9Upj7BzPc6TVG8pRmq4sp7_UW9VVNeP0TD8s,1695
 tooluniverse/tools/gwas_get_associations_for_study.py,sha256=AcobAhYhZ9BPKG9uVby7GREyu1V2zgq3-A0F4oNKfEo,1409
@@ -841,15 +877,15 @@ tooluniverse/tools/odphp_itemlist.py,sha256=WG6SfBH_NOoaGknMl4HuHX7RkfOOJliKuQys
 tooluniverse/tools/odphp_myhealthfinder.py,sha256=63TT6qurOPvhWdhJ382m69-1Ry6reII6_6mr4lOXCOs,1666
 tooluniverse/tools/odphp_outlink_fetch.py,sha256=0XEAlUab5QodcNNKlzN7uTj019crSyM-bkicdBnAQgA,1570
 tooluniverse/tools/odphp_topicsearch.py,sha256=nqgAzxqrU1WE6BFZzsv73vtpJ-Zd57s5HpDe3CmMxbg,1723
-tooluniverse/tools/openalex_literature_search.py,sha256=f-tjB0zmbKvw_fjPGjXIWLqWePZyscmgOHwWNQWuvJM,2023
+tooluniverse/tools/openalex_literature_search.py,sha256=U2vc_hfb21FdZnJPkVoaykbH2zLIyQVXA86ApX_vWLg,2089
 tooluniverse/tools/reactome_disease_target_score.py,sha256=pSSPBCJjgyugexkzf8y5s9w44vJ87lKJlHxMftUe1_c,1423
 tooluniverse/tools/search_clinical_trials.py,sha256=skW3aPZ1gXfjKJz8WkxGpt93XlHpnFc5oLIJbffUWc8,2044
 tooluniverse/tools/visualize_molecule_2d.py,sha256=yaaGErioVPG5qMi8nR6DbZbojJVCUc2mDiO7icBG60U,2462
 tooluniverse/tools/visualize_molecule_3d.py,sha256=0fFkjGz0hrNyRBiXRV_FY8yWXR47jZQXatXLxXwbrXw,2693
 tooluniverse/tools/visualize_protein_structure_3d.py,sha256=ifTkgPvtNtvJ9q8d7zmSqSnd32oFmRcKkoO8p1SdVUU,2358
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-tooluniverse-1.0.7.dist-info/RECORD,,
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