tooluniverse 0.1.1__py3-none-any.whl → 0.1.3__py3-none-any.whl

tooluniverse/openfda_tool.py

@@ -390,7 +390,7 @@ class FDADrugLabelGetDrugGenericNameTool(FDADrugLabelTool):
                 }
         
 
-        from data.fda_drugs_with_brand_generic_names_for_tool import drug_list
+        from .data.fda_drugs_with_brand_generic_names_for_tool import drug_list
         
         self.brand_to_generic = {drug['brand_name']: drug['generic_name'] for drug in drug_list}
         self.generic_to_brand = {drug['generic_name']: drug['brand_name'] for drug in drug_list}

tooluniverse-0.1.3.dist-info/LICENSE

@@ -0,0 +1,21 @@
+MIT License
+
+Copyright (c) 2025 Artificial Intelligence for Medicine and Science @ Harvard
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all
+copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+SOFTWARE.

{tooluniverse-0.1.1.dist-info → tooluniverse-0.1.3.dist-info}/METADATA

@@ -1,22 +1,22 @@
 Metadata-Version: 2.2
 Name: tooluniverse
-Version: 0.1.1
+Version: 0.1.3
 Summary: A collection of biomedical tools designed for use by Agentic AI.
 Home-page: https://github.com/mims-harvard/TxAgent
 Author: Shanghua Gao
 Author-email: shanghuagao@gmail.com
 Requires-Python: >=3.6
 Description-Content-Type: text/markdown
+License-File: LICENSE
 Requires-Dist: requests
 Requires-Dist: numpy
-Requires-Dist: graphql
 Requires-Dist: graphql-core
 
 # ToolUniverse
 
 [![ProjectPage](https://img.shields.io/badge/Page-TxAgent-red)](https://zitniklab.hms.harvard.edu/TxAgent)
-[![PaperLink](https://img.shields.io/badge/PDF-TxAgent-red)]()
-[![TxAgent-PIP](https://img.shields.io/badge/Pip-TxAgent-blue)]()
+[![PaperLink](https://img.shields.io/badge/Arxiv-TxAgent-red)](https://arxiv.org/pdf/2503.10970)
+[![TxAgent-PIP](https://img.shields.io/badge/Pip-TxAgent-blue)](https://pypi.org/project/txagent/)
 [![ToolUniverse-PIP](https://img.shields.io/badge/Pip-ToolUniverse-blue)](https://pypi.org/project/tooluniverse/)
 [![TxAgent](https://img.shields.io/badge/Code-TxAgent-purple)](https://github.com/mims-harvard/TxAgent)
 [![ToolUniverse](https://img.shields.io/badge/Code-ToolUniverse-purple)](https://github.com/mims-harvard/ToolUniverse)
@@ -75,8 +75,7 @@ Requires-Dist: graphql-core
                 <span class="author-block">
                   <a href="https://zitniklab.hms.harvard.edu/" target="_blank"
                     >Marinka Zitnik</a
-                  ><sup>,</span
-                >
+                  >
               </div>
 
 
@@ -122,3 +121,20 @@ tooluni.load_tools()
 query = {"name": "get_indications_by_drug_name", "arguments": {"drug_name": "KISUNLA"}}
 tooluni.run(query)
 ```
+## Citation
+
+```
+@misc{gao2025txagent,
+      title={TxAgent: An AI Agent for Therapeutic Reasoning Across a Universe of Tools}, 
+      author={Shanghua Gao and Richard Zhu and Zhenglun Kong and Ayush Noori and Xiaorui Su and Curtis Ginder and Theodoros Tsiligkaridis and Marinka Zitnik},
+      year={2025},
+      eprint={2503.10970},
+      archivePrefix={arXiv},
+      primaryClass={cs.AI},
+      url={https://arxiv.org/abs/2503.10970}, 
+}
+```
+
+## Contact
+If you have any questions or suggestions, please email [Shanghua Gao](mailto:shanghuagao@gmail.com) and [Marinka Zitnik](mailto:marinka@hms.harvard.edu).
+

{tooluniverse-0.1.1.dist-info → tooluniverse-0.1.3.dist-info}/RECORD

@@ -2,7 +2,7 @@ tooluniverse/__init__.py,sha256=j44hf13WM50HQJRi7aloeTG6y6872wJtfX8ydsaiJFI,652
 tooluniverse/base_tool.py,sha256=WMGgr02lhEsVzHgt7NIeynXQ2wZtu97yZI-lQWOSoSs,1145
 tooluniverse/execute_function.py,sha256=CmA8AIfyolkcooASD2_3pXgF1BqESU5_VUqdHSYiM_M,10139
 tooluniverse/graphql_tool.py,sha256=FpyP70ZiQkd031crECAhZ7CbXBor8x6S-n48VICnxVs,5086
-tooluniverse/openfda_tool.py,sha256=SPs4skPqwaC2RaZvqD1LA31VeQmMl4bOh7CkTpJKM5U,21017
+tooluniverse/openfda_tool.py,sha256=wSelkQiOn0hqMzoqflw3lOFnyT8a1q5A6hSc8YyOgx8,21018
 tooluniverse/restful_tool.py,sha256=5HoTyCSd507D4Qjcqjd16o8Y4BFZ02Zm4cGuczIXWdw,4078
 tooluniverse/utils.py,sha256=zh1IopojPBIJzK_8eGytTmWlPckluQQZTpiCQONw-pY,6416
 tooluniverse/data/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
@@ -11,7 +11,8 @@ tooluniverse/data/fda_drugs_with_brand_generic_names_for_tool.py,sha256=Clb7kQpP
 tooluniverse/data/monarch_tools.json,sha256=I5KvamNZRvkKBaKbM6Ypo333m-RejQhqScX8h-uket4,3567
 tooluniverse/data/opentarget_tools.json,sha256=nNvl-vYqS8nLfyIvHO40Fsnx6HJxwInUuS0mrrh6xmY,66201
 tooluniverse/data/special_tools.json,sha256=tOI0TFpdjZBEE5Af1Vc4CeXQ0gAkz39xho9hDVBYR70,1518
-tooluniverse-0.1.1.dist-info/METADATA,sha256=kMKoHTBKtQQ3RDEEfYFt3JNSxhz5fHacXvcHlRubrbo,4551
-tooluniverse-0.1.1.dist-info/WHEEL,sha256=52BFRY2Up02UkjOa29eZOS2VxUrpPORXg1pkohGGUS8,91
-tooluniverse-0.1.1.dist-info/top_level.txt,sha256=zZ8YeCJ5FAkEwdd_mxsFtSCQMBDgBdxrrmHo3RNBiWs,13
-tooluniverse-0.1.1.dist-info/RECORD,,
+tooluniverse-0.1.3.dist-info/LICENSE,sha256=Unq9Y3buGL9J0vFop03FYZiVweytt1xdgLIh2n9ck2c,1115
+tooluniverse-0.1.3.dist-info/METADATA,sha256=zx-hLNaex1UJcSD2LZlBFAL2Y5iUKRn_i1c1uhLKfxY,5198
+tooluniverse-0.1.3.dist-info/WHEEL,sha256=beeZ86-EfXScwlR_HKu4SllMC9wUEj_8Z_4FJ3egI2w,91
+tooluniverse-0.1.3.dist-info/top_level.txt,sha256=zZ8YeCJ5FAkEwdd_mxsFtSCQMBDgBdxrrmHo3RNBiWs,13
+tooluniverse-0.1.3.dist-info/RECORD,,

{tooluniverse-0.1.1.dist-info → tooluniverse-0.1.3.dist-info}/WHEEL

@@ -1,5 +1,5 @@
 Wheel-Version: 1.0
-Generator: setuptools (76.0.0)
+Generator: setuptools (76.1.0)
 Root-Is-Purelib: true
 Tag: py3-none-any