tooluniverse 0.1.0__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Potentially problematic release.
This version of tooluniverse might be problematic. Click here for more details.
- tooluniverse/__init__.py +17 -0
- tooluniverse/base_tool.py +32 -0
- tooluniverse/data/__init__.py +0 -0
- tooluniverse/data/fda_drug_labeling_tools.json +6529 -0
- tooluniverse/data/fda_drugs_with_brand_generic_names_for_tool.py +201670 -0
- tooluniverse/data/monarch_tools.json +118 -0
- tooluniverse/data/opentarget_tools.json +1415 -0
- tooluniverse/data/special_tools.json +48 -0
- tooluniverse/execute_function.py +216 -0
- tooluniverse/graphql_tool.py +122 -0
- tooluniverse/openfda_tool.py +421 -0
- tooluniverse/restful_tool.py +95 -0
- tooluniverse/utils.py +172 -0
- tooluniverse-0.1.0.dist-info/METADATA +54 -0
- tooluniverse-0.1.0.dist-info/RECORD +17 -0
- tooluniverse-0.1.0.dist-info/WHEEL +5 -0
- tooluniverse-0.1.0.dist-info/top_level.txt +1 -0
|
@@ -0,0 +1,118 @@
|
|
|
1
|
+
[
|
|
2
|
+
{
|
|
3
|
+
"name": "get_joint_associated_diseases_by_HPO_ID_list",
|
|
4
|
+
"description": "Retrieve diseases associated with a list of phenotypes or symptoms by a list of HPO IDs.",
|
|
5
|
+
"parameter": {
|
|
6
|
+
"type": "object",
|
|
7
|
+
"properties": {
|
|
8
|
+
"HPO_ID_list": {
|
|
9
|
+
"type": "array",
|
|
10
|
+
"description": "List of phenotypes or symptoms",
|
|
11
|
+
"items": {
|
|
12
|
+
"type": "string",
|
|
13
|
+
"description": "The HPO ID of the phenotype or symptom.",
|
|
14
|
+
"required": true
|
|
15
|
+
},
|
|
16
|
+
"required": true
|
|
17
|
+
},
|
|
18
|
+
"limit": {
|
|
19
|
+
"type": "integer",
|
|
20
|
+
"description": "Number of entries to fetch.",
|
|
21
|
+
"required": false
|
|
22
|
+
},
|
|
23
|
+
"offset": {
|
|
24
|
+
"type": "integer",
|
|
25
|
+
"description": "Number of initial entries to skip.",
|
|
26
|
+
"required": false
|
|
27
|
+
}
|
|
28
|
+
}
|
|
29
|
+
},
|
|
30
|
+
"query_schema": {
|
|
31
|
+
"category": [
|
|
32
|
+
"biolink:DiseaseToPhenotypicFeatureAssociation"
|
|
33
|
+
],
|
|
34
|
+
"object": null,
|
|
35
|
+
"compact": true,
|
|
36
|
+
"object_category": [
|
|
37
|
+
"biolink:PhenotypicFeature"
|
|
38
|
+
],
|
|
39
|
+
"limit": 500,
|
|
40
|
+
"offset": 0
|
|
41
|
+
},
|
|
42
|
+
"label": [
|
|
43
|
+
"Monarch",
|
|
44
|
+
"Phenotype",
|
|
45
|
+
"Symptom",
|
|
46
|
+
"Disease",
|
|
47
|
+
"HPO_ID"
|
|
48
|
+
],
|
|
49
|
+
"type": "MonarchDiseasesForMultiplePheno",
|
|
50
|
+
"tool_url": "/association"
|
|
51
|
+
},
|
|
52
|
+
{
|
|
53
|
+
"name": "get_phenotype_by_HPO_ID",
|
|
54
|
+
"description": "Retrieve a phenotype or symptom by its HPO ID.",
|
|
55
|
+
"parameter": {
|
|
56
|
+
"type": "object",
|
|
57
|
+
"properties": {
|
|
58
|
+
"id": {
|
|
59
|
+
"type": "string",
|
|
60
|
+
"description": "The HPO ID of the phenotype or symptom.",
|
|
61
|
+
"required": true
|
|
62
|
+
}
|
|
63
|
+
}
|
|
64
|
+
},
|
|
65
|
+
"query_schema": {
|
|
66
|
+
"id": null,
|
|
67
|
+
"url_key": "id"
|
|
68
|
+
},
|
|
69
|
+
"label": [
|
|
70
|
+
"Monarch",
|
|
71
|
+
"Phenotype",
|
|
72
|
+
"Symptom",
|
|
73
|
+
"HPO_ID"
|
|
74
|
+
],
|
|
75
|
+
"type": "Monarch",
|
|
76
|
+
"tool_url": "/entity/{url_key}"
|
|
77
|
+
},
|
|
78
|
+
{
|
|
79
|
+
"name": "get_HPO_ID_by_phenotype",
|
|
80
|
+
"description": "Retrieve the HPO ID of a phenotype or symptom.",
|
|
81
|
+
"parameter": {
|
|
82
|
+
"type": "object",
|
|
83
|
+
"properties": {
|
|
84
|
+
"query": {
|
|
85
|
+
"type": "string",
|
|
86
|
+
"description": "One query phenotype or symptom.",
|
|
87
|
+
"required": true
|
|
88
|
+
},
|
|
89
|
+
"limit": {
|
|
90
|
+
"type": "integer",
|
|
91
|
+
"description": "Number of entries to fetch.",
|
|
92
|
+
"required": false
|
|
93
|
+
},
|
|
94
|
+
"offset": {
|
|
95
|
+
"type": "integer",
|
|
96
|
+
"description": "Number of initial entries to skip.",
|
|
97
|
+
"required": false
|
|
98
|
+
}
|
|
99
|
+
}
|
|
100
|
+
},
|
|
101
|
+
"query_schema": {
|
|
102
|
+
"query": null,
|
|
103
|
+
"category": [
|
|
104
|
+
"biolink:PhenotypicFeature"
|
|
105
|
+
],
|
|
106
|
+
"limit": 20,
|
|
107
|
+
"offset": 0
|
|
108
|
+
},
|
|
109
|
+
"label": [
|
|
110
|
+
"Monarch",
|
|
111
|
+
"Phenotype",
|
|
112
|
+
"Symptom",
|
|
113
|
+
"HPO_ID"
|
|
114
|
+
],
|
|
115
|
+
"type": "Monarch",
|
|
116
|
+
"tool_url": "/search"
|
|
117
|
+
}
|
|
118
|
+
]
|