tomwer 1.4.19__py3-none-any.whl → 1.5.0__py3-none-any.whl

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Files changed (126) hide show
  1. orangecontrib/tomwer/tutorials/simple_volume_local_reconstruction.ows +11 -8
  2. orangecontrib/tomwer/tutorials/simple_volume_to_slurm_reconstruction.ows +12 -9
  3. orangecontrib/tomwer/widgets/control/DataDiscoveryOW.py +1 -1
  4. orangecontrib/tomwer/widgets/control/NXTomomillMixIn.py +21 -10
  5. tomwer/app/axis.py +1 -1
  6. tomwer/app/reducedarkflat.py +2 -2
  7. tomwer/core/process/control/datalistener/rpcserver.py +2 -8
  8. tomwer/core/process/drac/binning.py +2 -2
  9. tomwer/core/process/drac/output.py +1 -1
  10. tomwer/core/process/edit/imagekeyeditor.py +4 -6
  11. tomwer/core/process/edit/nxtomoeditor.py +58 -20
  12. tomwer/core/process/output.py +6 -5
  13. tomwer/core/process/reconstruction/axis/anglemode.py +2 -2
  14. tomwer/core/process/reconstruction/axis/axis.py +1 -0
  15. tomwer/core/process/reconstruction/axis/mode.py +2 -2
  16. tomwer/core/process/reconstruction/axis/params.py +4 -4
  17. tomwer/core/process/reconstruction/axis/projectiontype.py +1 -1
  18. tomwer/core/process/reconstruction/axis/side.py +1 -1
  19. tomwer/core/process/reconstruction/darkref/darkrefs.py +2 -2
  20. tomwer/core/process/reconstruction/darkref/darkrefscopy.py +1 -1
  21. tomwer/core/process/reconstruction/darkref/params.py +2 -3
  22. tomwer/core/process/reconstruction/nabu/castvolume.py +4 -1
  23. tomwer/core/process/reconstruction/nabu/helical.py +3 -1
  24. tomwer/core/process/reconstruction/nabu/nabucommon.py +2 -2
  25. tomwer/core/process/reconstruction/nabu/nabuscores.py +1 -1
  26. tomwer/core/process/reconstruction/nabu/nabuslices.py +4 -4
  27. tomwer/core/process/reconstruction/nabu/plane.py +2 -2
  28. tomwer/core/process/reconstruction/nabu/target.py +1 -1
  29. tomwer/core/process/reconstruction/nabu/test/test_castvolume.py +2 -0
  30. tomwer/core/process/reconstruction/nabu/test/test_nabu_utils.py +9 -0
  31. tomwer/core/process/reconstruction/nabu/utils.py +18 -14
  32. tomwer/core/process/reconstruction/normalization/normalization.py +1 -1
  33. tomwer/core/process/reconstruction/normalization/params.py +4 -4
  34. tomwer/core/process/reconstruction/output.py +2 -2
  35. tomwer/core/process/reconstruction/saaxis/params.py +3 -3
  36. tomwer/core/process/reconstruction/saaxis/saaxis.py +5 -1
  37. tomwer/core/process/reconstruction/scores/params.py +2 -2
  38. tomwer/core/process/reconstruction/scores/scores.py +3 -3
  39. tomwer/core/process/reconstruction/tests/test_axis.py +1 -1
  40. tomwer/core/process/reconstruction/tests/test_saaxis.py +56 -66
  41. tomwer/core/process/stitching/metadataholder.py +5 -5
  42. tomwer/core/process/stitching/nabustitcher.py +1 -4
  43. tomwer/core/process/tests/test_normalization.py +2 -1
  44. tomwer/core/scan/edfscan.py +3 -3
  45. tomwer/core/scan/nxtomoscan.py +3 -3
  46. tomwer/core/scan/scanbase.py +3 -3
  47. tomwer/core/scan/scantype.py +1 -1
  48. tomwer/core/settings.py +1 -1
  49. tomwer/core/tomwer_object.py +1 -1
  50. tomwer/core/utils/nxtomoutils.py +2 -2
  51. tomwer/core/utils/spec.py +6 -3
  52. tomwer/gui/cluster/slurm.py +3 -3
  53. tomwer/gui/configuration/level.py +1 -1
  54. tomwer/gui/control/actions.py +1 -1
  55. tomwer/gui/control/datadiscovery.py +1 -1
  56. tomwer/gui/control/datalist.py +1 -1
  57. tomwer/gui/control/reducedarkflatselector.py +4 -4
  58. tomwer/gui/control/series/seriescreator.py +5 -5
  59. tomwer/gui/control/tomoobjdisplaymode.py +1 -1
  60. tomwer/gui/dataportal/gallery.py +6 -6
  61. tomwer/gui/edit/imagekeyeditor.py +7 -9
  62. tomwer/gui/edit/nxtomoeditor.py +420 -112
  63. tomwer/gui/edit/tests/test_nx_editor.py +155 -83
  64. tomwer/gui/reconstruction/axis/CalculationWidget.py +1 -1
  65. tomwer/gui/reconstruction/axis/EstimatedCORWidget.py +12 -8
  66. tomwer/gui/reconstruction/axis/EstimatedCorComboBox.py +2 -2
  67. tomwer/gui/reconstruction/axis/InputWidget.py +3 -3
  68. tomwer/gui/reconstruction/darkref/darkrefwidget.py +2 -2
  69. tomwer/gui/reconstruction/nabu/castvolume.py +16 -1
  70. tomwer/gui/reconstruction/nabu/nabuconfig/base.py +2 -4
  71. tomwer/gui/reconstruction/nabu/nabuconfig/ctf.py +6 -6
  72. tomwer/gui/reconstruction/nabu/nabuconfig/nabuconfig.py +1 -1
  73. tomwer/gui/reconstruction/nabu/nabuconfig/phase.py +5 -5
  74. tomwer/gui/reconstruction/nabu/nabuconfig/preprocessing.py +2 -4
  75. tomwer/gui/reconstruction/nabu/nabuconfig/reconstruction.py +78 -52
  76. tomwer/gui/reconstruction/nabu/nabuflow.py +3 -13
  77. tomwer/gui/reconstruction/nabu/slices.py +11 -11
  78. tomwer/gui/reconstruction/nabu/test/test_cast_volume.py +19 -0
  79. tomwer/gui/reconstruction/nabu/volume.py +1 -1
  80. tomwer/gui/reconstruction/normalization/intensity.py +8 -12
  81. tomwer/gui/reconstruction/saaxis/corrangeselector.py +2 -2
  82. tomwer/gui/reconstruction/saaxis/dimensionwidget.py +71 -67
  83. tomwer/gui/reconstruction/sacommon.py +1 -1
  84. tomwer/gui/reconstruction/scores/scoreplot.py +18 -10
  85. tomwer/gui/reconstruction/tests/test_saaxis.py +18 -16
  86. tomwer/gui/stitching/SingleAxisStitchingWidget.py +8 -8
  87. tomwer/gui/stitching/StitchingOptionsWidget.py +1 -1
  88. tomwer/gui/stitching/alignment.py +8 -8
  89. tomwer/gui/stitching/config/axisparams.py +2 -2
  90. tomwer/gui/stitching/config/output.py +1 -1
  91. tomwer/gui/stitching/config/positionoveraxis.py +1 -1
  92. tomwer/gui/stitching/config/stitchingstrategies.py +4 -6
  93. tomwer/gui/stitching/config/tomoobjdetails.py +21 -13
  94. tomwer/gui/stitching/normalization.py +6 -6
  95. tomwer/gui/stitching/tests/test_ZStitchingWindow.py +8 -1
  96. tomwer/gui/stitching/tests/test_preview.py +10 -7
  97. tomwer/gui/stitching/tests/utils.py +27 -18
  98. tomwer/gui/stitching/z_stitching/fineestimation.py +7 -9
  99. tomwer/gui/stitching/z_stitching/tests/test_raw_estimation.py +18 -7
  100. tomwer/gui/stitching/z_stitching/tests/test_stitching_window.py +7 -2
  101. tomwer/gui/utils/buttons.py +54 -36
  102. tomwer/gui/utils/flow.py +2 -2
  103. tomwer/gui/utils/loadingmode.py +1 -1
  104. tomwer/gui/utils/unitsystem.py +44 -33
  105. tomwer/gui/utils/vignettes.py +1 -1
  106. tomwer/gui/visualization/dataviewer.py +7 -7
  107. tomwer/gui/visualization/diffviewer/diffviewer.py +4 -4
  108. tomwer/gui/visualization/diffviewer/shiftwidget.py +4 -6
  109. tomwer/gui/visualization/reconstructionparameters.py +35 -23
  110. tomwer/gui/visualization/scanoverview.py +28 -11
  111. tomwer/gui/visualization/test/test_nx_tomo_metadata_viewer.py +25 -13
  112. tomwer/gui/visualization/test/test_reconstruction_parameters.py +2 -2
  113. tomwer/model/dataset.py +0 -0
  114. tomwer/resources/gui/icons/borders.png +0 -0
  115. tomwer/synctools/utils/scanstages.py +3 -3
  116. tomwer/tasks/reconstruction/cleardarkflat.py +42 -0
  117. tomwer/tests/app/test_stitching.py +1 -1
  118. tomwer/tests/orangecontrib/tomwer/widgets/edit/tests/test_nxtomo_editor.py +32 -20
  119. tomwer/tests/orangecontrib/tomwer/widgets/reconstruction/tests/test_nabu_widget.py +1 -1
  120. tomwer/version.py +2 -2
  121. {tomwer-1.4.19.dist-info → tomwer-1.5.0.dist-info}/METADATA +8 -8
  122. {tomwer-1.4.19.dist-info → tomwer-1.5.0.dist-info}/RECORD +126 -123
  123. {tomwer-1.4.19.dist-info → tomwer-1.5.0.dist-info}/WHEEL +1 -1
  124. {tomwer-1.4.19.dist-info → tomwer-1.5.0.dist-info}/entry_points.txt +0 -0
  125. {tomwer-1.4.19.dist-info → tomwer-1.5.0.dist-info}/licenses/LICENSE +0 -0
  126. {tomwer-1.4.19.dist-info → tomwer-1.5.0.dist-info}/top_level.txt +0 -0
{tomwer-1.4.19.dist-info → tomwer-1.5.0.dist-info}/WHEEL RENAMED
@@ -1,5 +1,5 @@
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  Wheel-Version: 1.0
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- Generator: setuptools (78.1.0)
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+ Generator: setuptools (80.9.0)
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  Root-Is-Purelib: true
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  Tag: py3-none-any
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