tomwer 1.4.0rc6__py3-none-any.whl → 1.4.1__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (58) hide show
  1. orangecontrib/tomwer/tutorials/simple_volume_to_slurm_reconstruction.ows +2 -2
  2. orangecontrib/tomwer/widgets/reconstruction/AxisOW.py +19 -47
  3. orangecontrib/tomwer/widgets/reconstruction/NabuOW.py +8 -3
  4. orangecontrib/tomwer/widgets/reconstruction/NabuVolumeOW.py +4 -6
  5. orangecontrib/tomwer/widgets/reconstruction/SAAxisOW.py +8 -4
  6. orangecontrib/tomwer/widgets/reconstruction/SADeltaBetaOW.py +0 -4
  7. orangecontrib/tomwer/widgets/reconstruction/SinoNormOW.py +1 -13
  8. tomwer/app/axis.py +0 -1
  9. tomwer/app/intensitynormalization.py +0 -14
  10. tomwer/app/multicor.py +1 -33
  11. tomwer/app/multipag.py +1 -31
  12. tomwer/app/nabuapp.py +0 -1
  13. tomwer/app/patchrawdarkflat.py +0 -3
  14. tomwer/app/reducedarkflat.py +0 -1
  15. tomwer/core/process/control/datalistener/datalistener.py +0 -232
  16. tomwer/core/process/control/datawatcher/datawatcher.py +0 -5
  17. tomwer/core/process/control/scantransfer.py +3 -60
  18. tomwer/core/process/edit/darkflatpatch.py +0 -8
  19. tomwer/core/process/edit/imagekeyeditor.py +2 -19
  20. tomwer/core/process/reconstruction/axis/axis.py +0 -13
  21. tomwer/core/process/reconstruction/darkref/darkrefs.py +0 -59
  22. tomwer/core/process/reconstruction/nabu/nabuslices.py +0 -88
  23. tomwer/core/process/reconstruction/nabu/nabuvolume.py +0 -10
  24. tomwer/core/process/reconstruction/params_cache.py +36 -0
  25. tomwer/core/process/reconstruction/saaxis/saaxis.py +80 -88
  26. tomwer/core/process/reconstruction/sadeltabeta/sadeltabeta.py +78 -86
  27. tomwer/core/process/reconstruction/tests/test_params_cache.py +37 -0
  28. tomwer/core/process/script/python.py +0 -19
  29. tomwer/core/process/task.py +0 -290
  30. tomwer/core/process/tests/test_dark_and_flat.py +0 -6
  31. tomwer/core/process/tests/test_data_transfer.py +0 -1
  32. tomwer/core/process/tests/test_data_watcher.py +6 -23
  33. tomwer/core/scan/edfscan.py +0 -11
  34. tomwer/core/scan/nxtomoscan.py +0 -12
  35. tomwer/core/scan/scanbase.py +0 -81
  36. tomwer/gui/reconstruction/axis/CalculationWidget.py +3 -5
  37. tomwer/gui/reconstruction/tests/test_saaxis.py +2 -2
  38. tomwer/gui/reconstruction/tests/test_sadeltabeta.py +2 -2
  39. tomwer/gui/stitching/config/axisparams.py +2 -0
  40. tomwer/synctools/stacks/reconstruction/axis.py +0 -18
  41. tomwer/synctools/tests/test_foldertransfer.py +2 -19
  42. tomwer/tests/orangecontrib/tomwer/widgets/reconstruction/tests/test_i_norm.py +0 -10
  43. tomwer/tests/orangecontrib/tomwer/widgets/reconstruction/tests/test_sa_delta_beta.py +103 -153
  44. tomwer/tests/orangecontrib/tomwer/widgets/reconstruction/tests/test_saaxis.py +117 -152
  45. tomwer/tests/orangecontrib/tomwer/widgets/{tests/test_darkref.py → test_darkref.py} +0 -9
  46. tomwer/tests/orangecontrib/tomwer/widgets/{tests/test_foldertransfert.py → test_foldertransfert.py} +1 -1
  47. tomwer/tests/test_ewoks/test_workflows.py +0 -4
  48. tomwer/version.py +3 -3
  49. {tomwer-1.4.0rc6.dist-info → tomwer-1.4.1.dist-info}/METADATA +1 -2
  50. {tomwer-1.4.0rc6.dist-info → tomwer-1.4.1.dist-info}/RECORD +55 -56
  51. tomwer/core/scan/tests/test_process_registration.py +0 -64
  52. tomwer/core/utils/Singleton.py +0 -36
  53. tomwer/core/utils/locker.py +0 -58
  54. /tomwer/tests/orangecontrib/tomwer/widgets/{tests/test_conditions.py → test_conditions.py} +0 -0
  55. {tomwer-1.4.0rc6.dist-info → tomwer-1.4.1.dist-info}/LICENSE +0 -0
  56. {tomwer-1.4.0rc6.dist-info → tomwer-1.4.1.dist-info}/WHEEL +0 -0
  57. {tomwer-1.4.0rc6.dist-info → tomwer-1.4.1.dist-info}/entry_points.txt +0 -0
  58. {tomwer-1.4.0rc6.dist-info → tomwer-1.4.1.dist-info}/top_level.txt +0 -0
@@ -17,7 +17,7 @@ orangecontrib/tomwer/tutorials/hello_world_python_script.ows,sha256=b4zBqpzwmE6h
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  orangecontrib/tomwer/tutorials/simple_slice_reconstruction.ows,sha256=O9Bnunjh0Q9tqpNZ56yQo7UqHAiynHH_NTB4_y6N-Ao,4435
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  orangecontrib/tomwer/tutorials/simple_slice_reconstruction_on_slurm.ows,sha256=t-fwTMCvqQV17AIZWM0lSCmjC6loLEHNZSFmAADF9xY,6584
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  orangecontrib/tomwer/tutorials/simple_volume_local_reconstruction.ows,sha256=BBxkMX98PjDZsgxiVz4i-xPFw4WMdzif2YPnRQfONP4,5945
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- orangecontrib/tomwer/tutorials/simple_volume_to_slurm_reconstruction.ows,sha256=TxVvFAfuV-HCIq9k_J45w9VtHDhLfmsN6wWuTNVYnPI,9163
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+ orangecontrib/tomwer/tutorials/simple_volume_to_slurm_reconstruction.ows,sha256=qjwsBFk4Bq_Enr3eolCb5oRgH-jMiY1ljqi79JXgjcM,9159
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  orangecontrib/tomwer/tutorials/test_cor.ows,sha256=tlpNXVRRhGQR5yGMvWvVR5DqVyl1G3f8hSQ8u17hmLU,2464
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  orangecontrib/tomwer/tutorials/using_saaxis_to_find_cor.ows,sha256=TUZNkXEsQyj7Qra1GEb4IhGFDWv3uJzqXbp3P04jwbs,5192
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@@ -148,15 +148,15 @@ orangecontrib/tomwer/widgets/other/icons/PythonScript.svg,sha256=-8O2mNwRmyVdFvp
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- orangecontrib/tomwer/widgets/reconstruction/AxisOW.py,sha256=6OqPwKOiChmC6bI2-0O5pmTgMfGi_ndL2t_k-6uY1sg,21481
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+ orangecontrib/tomwer/widgets/reconstruction/AxisOW.py,sha256=Qz6r34NdNgBvn-UwbIhPQDDCgtlXa_rSLnCEIuI_mrQ,20067
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  orangecontrib/tomwer/widgets/reconstruction/CastNabuVolumeOW.py,sha256=E9hTJH_WfMsbOpKsGworVkqc16kWIRL1ajZbpnT_IAI,7614
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  orangecontrib/tomwer/widgets/reconstruction/DarkRefAndCopyOW.py,sha256=Xd0HwZLMHSCBQ0nqr0q69n9z5p2-ziEXjyOxY4lRU4Q,9741
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  orangecontrib/tomwer/widgets/reconstruction/NabuHelicalPrepareWeightsDoubleOW.py,sha256=NjMC0BEmPhDZ795Q-yyL81-hluAyGE8MRiq8xMdqAqY,6233
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- orangecontrib/tomwer/widgets/reconstruction/NabuOW.py,sha256=DK37PoJtHDUnSBKCRmTKwPdrPfxmK1tgiD3MVFmk2zI,9830
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- orangecontrib/tomwer/widgets/reconstruction/NabuVolumeOW.py,sha256=nkBvq4_jagIWb6iGxA-xj-fjzv4rtP9SsQ4lmX-im0k,17184
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- orangecontrib/tomwer/widgets/reconstruction/SAAxisOW.py,sha256=LrWwicK_bSjWP5MO5C7stetsbdPBTLbi7iFDrTI7WAY,17365
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- orangecontrib/tomwer/widgets/reconstruction/SADeltaBetaOW.py,sha256=AtkhHV2W5dlZkDKdOza-sCRMb8Ot_V83xeXpmXn8uZg,14166
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- orangecontrib/tomwer/widgets/reconstruction/SinoNormOW.py,sha256=nBVG6DcZv-cHRLfHtJN7gEqbahMVkt_n5tbm98I5RDg,9445
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+ orangecontrib/tomwer/widgets/reconstruction/NabuOW.py,sha256=UvCNwpAtQ1AdCl5kUw13QsKxesIDV8SIjIW9cWCXIMc,9946
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+ orangecontrib/tomwer/widgets/reconstruction/NabuVolumeOW.py,sha256=j-jDhgv6jvNOBz9X4vwGA-4UYbQ5I2FWSv6X2Eczrfg,17077
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+ orangecontrib/tomwer/widgets/reconstruction/SAAxisOW.py,sha256=6v57MWWDejzf5tcU3RqwQOIIsYyZn4lzP_JUq5WcElQ,17488
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+ orangecontrib/tomwer/widgets/reconstruction/SADeltaBetaOW.py,sha256=3-JUMNswoAVcycHLZBfZJGWyVDNKx6ZSz3ZgxxV1q2I,14005
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+ orangecontrib/tomwer/widgets/reconstruction/SinoNormOW.py,sha256=HVia_JxLIpk6oP-6fza4wYhXsG3i2dLvA5XxrWfQpac,8843
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@@ -220,23 +220,23 @@ orangecontrib/tomwer/widgets/visualization/tests/__init__.py,sha256=47DEQpj8HBSa
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  tomwer/__init__.py,sha256=GeLSeY4__z-HQZu1y4ptZ5Y1OeXFvG8kuEwWXhkeaMA,360
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  tomwer/__main__.py,sha256=7tCADiS4u7k1PCxFhlRAcYSIOpxQTGUTx8sCEQ-hi1E,8707
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  tomwer/utils.py,sha256=7h7dEgKAEUmQ43jkULvC1B9Adl55nkCty-SEKUKCl4U,7008
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- tomwer/version.py,sha256=ABKZcbbdiiZ2_L0q0fvFdws8jKNwVcS5TWkn1xSEM74,4383
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+ tomwer/version.py,sha256=HqQAJgfU5vpvx0RHpY6UlCs10HU0x9QpXer8ENGvoZQ,4386
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  tomwer/app/__init__.py,sha256=RYMB2YhbQaoMXC8W-oOyfZ_Y1vmHD7L13YkKeAMuShM,85
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- tomwer/app/axis.py,sha256=BJNuwMOjw1vS2w-9sKxltIgWMEWAPetnK2sAOFmXoZg,5880
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+ tomwer/app/axis.py,sha256=OhDgMj_gS-45PnjKBTyOCOkmZ1Iy-Tb6Dj66mzQg0sU,5827
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- tomwer/app/intensitynormalization.py,sha256=Q22HRWJ4SuuUvAr7Et9h8IKILT-Yh-PY-yp3q6CTkpI,6660
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- tomwer/app/multicor.py,sha256=6cud0C3Jistpe4YDxs0JvBuobEuBY5Kghqp28DrUJ2c,10053
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- tomwer/app/multipag.py,sha256=Ic2b1Qnx0ojDtoxc3P8p-7U-ixBytA919iAatgI_j3c,13141
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- tomwer/app/nabuapp.py,sha256=cQNcIcAEv1urMpMABQWCQOy_ODi2A9Wr5hK2-KGB2C0,7697
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+ tomwer/app/intensitynormalization.py,sha256=5uT8xQWjjq7uV8-0jru_2Qf9SIN5ooVCPH8Ok8inMYE,5998
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+ tomwer/app/multicor.py,sha256=Y8cOoMRUwQvfG538HNfH8Si_Haf40PU89QNICqLLTvs,8901
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+ tomwer/app/multipag.py,sha256=m-sDDzzVA88w5OQ89lH6GsljvDJh2UgQSfqPdBwIV-M,12017
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+ tomwer/app/nabuapp.py,sha256=QZauaxxn_sxBvD5GHxoO42hICFtpzDQxePd4ALpgz4o,7644
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- tomwer/app/patchrawdarkflat.py,sha256=P3PQbcEaXGSljB-QSeCpn1yM1fYLXlcyx7wcxhBs3n8,3898
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+ tomwer/app/patchrawdarkflat.py,sha256=ORegJ--eo9S16NmuT1c4E64-2rQuOEHpveIfmoF9FAc,3780
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- tomwer/app/reducedarkflat.py,sha256=Jrz_Vgd4CLmHC0D2DnydosNGKLDzWolRuzxTQJxdMGc,6626
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+ tomwer/app/reducedarkflat.py,sha256=4n1bL65INw6TTq8ZCG8H5HwrtiioNjlD7MaZNWF7C9g,6573
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@@ -265,7 +265,7 @@ tomwer/core/log/__init__.py,sha256=KGCK6l3cxffNGnNEYGQzbjSccFD44eR951QA8DOXv7s,7
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- tomwer/core/process/task.py,sha256=amM_OmMHgNsY5R2lNhqiUuJsHny2rIYNQk83A16kcAI,13793
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+ tomwer/core/process/task.py,sha256=0TqjX-bpCFvtqXGBC4WlBgMMnyh5bTEuvBHfA6U2igw,3411
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@@ -278,17 +278,17 @@ tomwer/core/process/control/nxtomoconcatenate.py,sha256=fRa8XeLyc4ocQGQtwcHYX4db
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- tomwer/core/process/control/scantransfer.py,sha256=bAJuEHyIQNIEsEDzmESMhq59_9n2xMH26UScG2wsq5I,26732
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+ tomwer/core/process/control/scantransfer.py,sha256=WoXwalXem7G3baP1cH4czpq1DqlTX614TilT6ojsNOs,24366
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+ tomwer/core/process/control/datalistener/datalistener.py,sha256=kNDTIeMhJ6n019b2XWoGoB8zDCv-zpVxE7YDzZR9KBM,9606
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@@ -310,23 +310,24 @@ tomwer/core/process/drac/tests/test_gallery.py,sha256=WZaK42Y5S8sNrzgTToqctYvle8
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+ tomwer/core/process/edit/darkflatpatch.py,sha256=ONMoe2RqXddR7roNWjFUizjPPJKZPmKu3M10kZ0DLl4,3642
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+ tomwer/core/process/edit/imagekeyeditor.py,sha256=S44xxXXAbB1jmLe-O2wCabDeTCtF6vojv-80n9cCbeI,7403
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@@ -335,8 +336,8 @@ tomwer/core/process/reconstruction/nabu/castvolume.py,sha256=4VEVnJxWfG8_Ku2uhUS
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- tomwer/core/process/reconstruction/nabu/nabuvolume.py,sha256=O9d3PUvkk5r-YNEcOfzyPSx5DT1pu8wGXWXpQ0GhWnw,20556
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+ tomwer/core/process/reconstruction/nabu/nabuslices.py,sha256=sUpU1f6_qWbuKVUDNattFVvFE88By29f3CtTCtuKT-k,31517
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+ tomwer/core/process/reconstruction/nabu/nabuvolume.py,sha256=Fn0tkPDTDJQaMEJA4LzpPp0ZtG4MIu9YN82-jesxRKo,20052
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@@ -349,10 +350,10 @@ tomwer/core/process/reconstruction/normalization/normalization.py,sha256=lG9eqfz
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+ tomwer/core/process/reconstruction/saaxis/saaxis.py,sha256=dfPVPEL5YAIsJkAwjZpbQCPve1dgaI0L4ooxLKxYpvw,30166
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- tomwer/core/process/reconstruction/sadeltabeta/sadeltabeta.py,sha256=L01nI67Fhu0_mWMhncOEiFaItQirzbIbMJ0TYBFgIaE,29603
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+ tomwer/core/process/reconstruction/sadeltabeta/sadeltabeta.py,sha256=2HhoaWMiXKvJvpQ_J0ox6Tkn2ryqVmOCLt-ksxGOnt4,29076
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+ tomwer/core/process/reconstruction/tests/test_params_cache.py,sha256=mNqWbOLr4mo06mwF3KhFpQPRvGgFxsCTPhLlK-fF2Ro,1238
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@@ -368,7 +370,7 @@ tomwer/core/process/reconstruction/tests/test_utils.py,sha256=o_w8Bkk3T0btLCAan2
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+ tomwer/core/process/script/python.py,sha256=NScx6DtRA6m71jciiN6a7QIr3ICWmo3rXJY1hoExp5A,2074
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@@ -376,10 +378,10 @@ tomwer/core/process/stitching/nabustitcher.py,sha256=DQTmCqOvcei9S9eu-H9NoVXBcBQ
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- tomwer/core/process/tests/test_dark_and_flat.py,sha256=qLfx3YkZr6_XbTITxULerv7jCv8z7idCXsRKIsJXdMw,14121
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+ tomwer/core/process/tests/test_dark_and_flat.py,sha256=NmKDl-C6foyDWNt-Du8yAgcTC2D_k5DF2gqNkXPCniA,13765
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- tomwer/core/process/tests/test_data_transfer.py,sha256=y_W9uZc6GOt1kZRMQMF-b-0zGVDj7nWi-aRaoSg0okM,14095
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- tomwer/core/process/tests/test_data_watcher.py,sha256=BNKkcUtfyqea_Tu8gwAymNVFE_xw1wtyJfLfSTubccg,1815
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+ tomwer/core/process/tests/test_data_transfer.py,sha256=2eQ4-UzscI4PbFWopY0kACumAP4feVekN9W6uzbz2rM,14031
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+ tomwer/core/process/tests/test_data_watcher.py,sha256=i08qwGz1pOH8u_W8A7UpjYRActf2heKvcFWNvVJRSYQ,1262
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@@ -402,24 +404,22 @@ tomwer/core/process/visualization/tests/test_slice_stack.py,sha256=9gFx-FldlnjI6
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- tomwer/core/scan/edfscan.py,sha256=hsFzpYyPIrvsLM61J9aDmpdVskMTFO94fNcF3HEG_iI,21276
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+ tomwer/core/scan/edfscan.py,sha256=5brP6ewiDRaT0ssSf35kAYzfWwynyTaoSPcOjmNxf0o,20836
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- tomwer/core/scan/nxtomoscan.py,sha256=H-qSuRiO8orBV5EJBkg5uhUDAJOG2oF1nj5o13MO1xw,18913
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- tomwer/core/scan/scanbase.py,sha256=TMfoQHJgaWTNJfjXiOVYDLT58A03T-O-8MDOM6bwt3E,28514
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+ tomwer/core/scan/nxtomoscan.py,sha256=wfyTtgxSaazxacUyUxdESJldUTbpJ8G-NhF09xO1XGI,18413
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+ tomwer/core/scan/scanbase.py,sha256=GO5DgYHtLZJwLW1-Y4ztHxgfdGMPUIhx1rhBG9lWBeM,25627
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- tomwer/core/scan/tests/test_process_registration.py,sha256=g4Toef92SjxCBUE82MTbjonFJpc3PQqfpF6FSCarN5U,1988
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- tomwer/core/utils/Singleton.py,sha256=57g7-B2eqyrneT8DQ2Tzqha0bg-mcdSdaPtOjhsGWVc,1559
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@@ -428,7 +428,6 @@ tomwer/core/utils/ftseriesutils.py,sha256=HIiUzEPO9k3dRAYr0WB4LYqEifQ624r1HqMi3T
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- tomwer/core/utils/locker.py,sha256=k7IY84c4o2pR22R7CPasvh2COVVqWsIc5-AdVtOysUs,1777
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@@ -544,7 +543,7 @@ tomwer/gui/reconstruction/axis/AxisMainWindow.py,sha256=7w2LhdQ1pa8vU9U-XTA3ohGQ
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  tomwer/gui/reconstruction/axis/AxisWidget.py,sha256=nkORZHLo8D3Sk8j-8QVr9l3Qse66s-Nv-tB6kCkSMTY,19794
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- tomwer/gui/reconstruction/axis/CalculationWidget.py,sha256=OgEeOCml6p-vJwEpKZLIoHLXfIrU9X7nLWewPswN1jE,8628
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+ tomwer/gui/reconstruction/axis/CalculationWidget.py,sha256=E9zwJ2dNnc7KGH1QHRZE2eElIzj_r4GbPCIG_hn2yhw,8628
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  tomwer/gui/reconstruction/axis/CompareImages.py,sha256=jqzlMBU_tfIdR1yHuZa8Avt8Te0EPBkjI6R4TY6kIlw,11425
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  tomwer/gui/reconstruction/axis/ControlWidget.py,sha256=DsBPFIEZCva-JPUFxORjkAnoYfgb5udfJ71W-fCwgRY,10686
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  tomwer/gui/reconstruction/axis/EstimatedCORWidget.py,sha256=dL9SCjPEZ7MQLGZP0gZARb-rxD8YYSl-gcFyuN14jwg,17081
@@ -593,8 +592,8 @@ tomwer/gui/reconstruction/scores/scoreplot.py,sha256=TCVG29UDq3w-5oo5QMXJ9IIx2-v
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- tomwer/gui/reconstruction/tests/test_saaxis.py,sha256=XuIlhkdJXdnyYNStyhtmo3Qth4n8kz9z3pkz5XUyDWQ,6678
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- tomwer/gui/reconstruction/tests/test_sadeltabeta.py,sha256=fqzVuqFR74aHvDujxrMgoFCI8qj8F6dQRpODOBbhCg0,4477
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+ tomwer/gui/reconstruction/tests/test_saaxis.py,sha256=6lXKa5yY8pYkcBap7hyzLwhp8W3WWX8B3TTfBrm26dQ,6692
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+ tomwer/gui/reconstruction/tests/test_sadeltabeta.py,sha256=96tE_gxIcmp0qDXQmIwSEkYl3Js7dT2CyUH1doyjGc0,4491
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  tomwer/gui/stitching/SingleAxisStitchingWidget.py,sha256=syBzSf8yRE9poZh0UKqZcyD8ZmEt-vama8bVRsGBuDw,13023
@@ -613,7 +612,7 @@ tomwer/gui/stitching/stitching_preview.py,sha256=QqWfw5jOqpmfEDCR-VGrbTtGTU9l06q
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- tomwer/gui/stitching/config/axisparams.py,sha256=08UGAkuT3oJwK752JQ9yBBrKZ_K1nLwTJpyaMPwV8eo,7961
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+ tomwer/gui/stitching/config/axisparams.py,sha256=1cRa9ukPvVK7AGePJsJx2M_i_5TMLJocVwrotz7uxXk,8026
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  tomwer/gui/stitching/config/output.py,sha256=sVmPQDMmFjmG5Dtuqy-805Qh8ZIbnDMgShnQOgjWQxQ,5936
618
617
  tomwer/gui/stitching/config/positionoveraxis.py,sha256=NGgjxzhxCXa3fBtHP9O9oiqLw8lpUqV_NNbhrnRGrdY,16328
619
618
  tomwer/gui/stitching/config/stitchingstrategies.py,sha256=BI5KYs0qeEp-hfFI7M9MJN8EHmoC7iaJqQ7Hf902v6Y,4598
@@ -836,7 +835,7 @@ tomwer/synctools/stacks/processingstack.py,sha256=egB5kg5DesKkfzGhfcM9_ffozPFwBY
836
835
  tomwer/synctools/stacks/control/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
837
836
  tomwer/synctools/stacks/control/datalistener.py,sha256=XN40esWfSQPgsy9HHrjvd3imSg7gcTzZ2OJgAFEtbEs,3785
838
837
  tomwer/synctools/stacks/reconstruction/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
839
- tomwer/synctools/stacks/reconstruction/axis.py,sha256=yMqyElpL2c55sKjRTbZ3xLzIiev0I0-UTupfRn6IcsI,6922
838
+ tomwer/synctools/stacks/reconstruction/axis.py,sha256=yq36BFGUGq0dtrDYE581nA2kMomMex6Nl7JSF2EVa_U,6088
840
839
  tomwer/synctools/stacks/reconstruction/castvolume.py,sha256=hyLW_M6uR81nUAk1ZvyyYMd3gvIcWfqKF7RSdUgVzmQ,6795
841
840
  tomwer/synctools/stacks/reconstruction/dkrefcopy.py,sha256=bemmlZajyoT7hAvGeEfhEXuxIN1IwhgEwnYSe1htXKA,6171
842
841
  tomwer/synctools/stacks/reconstruction/nabu.py,sha256=sSrxcUdn3B6u4gKtevlw5Vc5wI9Qf-mzCbOowT2W0zM,6495
@@ -845,7 +844,7 @@ tomwer/synctools/stacks/reconstruction/saaxis.py,sha256=6HHfNfT4n6podzB_X88AjC7s
845
844
  tomwer/synctools/stacks/reconstruction/sadeltabeta.py,sha256=Oo0mczxv3-DxedpOybyMSUZAlcf65W8ZiCeTvPMHEas,5796
846
845
  tomwer/synctools/tests/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
847
846
  tomwer/synctools/tests/test_darkRefs.py,sha256=1OgWaV-hgDmi4rkh0hxjCW_codBAnxNhp3KFyZAWFOI,14534
848
- tomwer/synctools/tests/test_foldertransfer.py,sha256=sfDJWPZv6UJNLWMGQj90L-e08lhMmydN3t7oEQSozV8,12724
847
+ tomwer/synctools/tests/test_foldertransfer.py,sha256=ZFIJWSjgYAWw3ktzamid5DJZNnMkAV6Pj72dKG69cJc,12024
849
848
  tomwer/synctools/utils/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
850
849
  tomwer/synctools/utils/scanstages.py,sha256=vIUKVDSfM2UwPjjmZTiIN1tNg4antnGcSPv1aYapJCY,7830
851
850
  tomwer/tests/__init__.py,sha256=dPPaIvpzHssjwxsMzYJM_gxQ2e0cnRyQHXxi9ux6ZOY,19
@@ -855,6 +854,9 @@ tomwer/tests/test_scripts.py,sha256=LAVRe9PLj-8I-9upzd4QTXhktIpuaCFmVyw_e_Lhwrk,
855
854
  tomwer/tests/test_utils.py,sha256=D0rNDSK6csEOYBY_7gD-4A3jp8rYAm8L1_Xg34A9I2s,305
856
855
  tomwer/tests/utils.py,sha256=RAXx5A99WD4Vyuv_wjHBdr-Xu7UiThHRKw2eiB5GX10,107
857
856
  tomwer/tests/app/test_stitching.py,sha256=Mxei5aekh9-58JgeSM0UcnH9sAGa2aol0lAyGYexF-U,4157
857
+ tomwer/tests/orangecontrib/tomwer/widgets/test_conditions.py,sha256=J5039sm1slNiXoNyMNjBehrhjkp16mZ1UAL5wTDSz5w,2866
858
+ tomwer/tests/orangecontrib/tomwer/widgets/test_darkref.py,sha256=SB8WrfRVcTc6yB752KReMkOihY69yZC0_8EGPpIpkV4,7700
859
+ tomwer/tests/orangecontrib/tomwer/widgets/test_foldertransfert.py,sha256=ESiODdNiEbxbuLTdt1E9qgVV66qIS74uzrXYqwzq_wM,3370
858
860
  tomwer/tests/orangecontrib/tomwer/widgets/cluster/tests/test_future_supervisorow.py,sha256=TzOs2zXMuNIZ1zvSIBUA7iouKW-IrB0msMYEQOQcHwU,1229
859
861
  tomwer/tests/orangecontrib/tomwer/widgets/cluster/tests/test_slurm_clusterow.py,sha256=oUoZrrBRyoYPrRSxwuaUcAqJcqkOi9BZrJn1nSeIYvU,1212
860
862
  tomwer/tests/orangecontrib/tomwer/widgets/control/tests/test_advancement.py,sha256=uWo7ORZyWjnjrVtAJFHmhCJKmnXcqfY2HVT4yL7E4Y8,207
@@ -883,16 +885,13 @@ tomwer/tests/orangecontrib/tomwer/widgets/reconstruction/tests/test_axis.py,sha2
883
885
  tomwer/tests/orangecontrib/tomwer/widgets/reconstruction/tests/test_cast_volumeow.py,sha256=4urO8fmzwNUyaThujIOX7X37g-_DEtTerpirgMz_47o,1612
884
886
  tomwer/tests/orangecontrib/tomwer/widgets/reconstruction/tests/test_dark_refs_widget.py,sha256=qCiY4Gm_z6OsoLjVDLpHv4W1zCYNiBDT5QSCvLPzrOc,4925
885
887
  tomwer/tests/orangecontrib/tomwer/widgets/reconstruction/tests/test_delta_beta_selector.py,sha256=BJcjGemqzqwjqBVVCMLB_ASDWGtAyQUO6cl4m2N9m2E,407
886
- tomwer/tests/orangecontrib/tomwer/widgets/reconstruction/tests/test_i_norm.py,sha256=KLRwzPG0UAAS9XLE97k7YcPd0LSabUnU5_TZ2yqi4mk,6543
888
+ tomwer/tests/orangecontrib/tomwer/widgets/reconstruction/tests/test_i_norm.py,sha256=L-wYwihJP5ZBzA-2jECIV8XPLM5hAguGpM_qDByA9Jc,6007
887
889
  tomwer/tests/orangecontrib/tomwer/widgets/reconstruction/tests/test_nabu_helical_prepare_weights_double.py,sha256=ofao24KYcPCWoxR771MtfKv4EY3TjFLFgRtJtEgKYrI,621
888
890
  tomwer/tests/orangecontrib/tomwer/widgets/reconstruction/tests/test_nabu_volume.py,sha256=0g0eCp6RDQlRSZe0me4LvGxTA66ChRtwQjCAWMmsvj8,2298
889
891
  tomwer/tests/orangecontrib/tomwer/widgets/reconstruction/tests/test_nabu_widget.py,sha256=_yhT_ih0VIBsm2OdLObuZgjpLf38ILXvzn7pOTtxdl8,3780
890
- tomwer/tests/orangecontrib/tomwer/widgets/reconstruction/tests/test_sa_delta_beta.py,sha256=3zoCu0QYapnemEmQ5J0d-iG2MderB8_afxsHgiJCLFc,6222
891
- tomwer/tests/orangecontrib/tomwer/widgets/reconstruction/tests/test_saaxis.py,sha256=wLEFzUMvZVK6QXzMsgzsuf2YOeWp0jrHJGezoxptJZY,6191
892
+ tomwer/tests/orangecontrib/tomwer/widgets/reconstruction/tests/test_sa_delta_beta.py,sha256=0trFahCrr57ZWCN8WJsJAmiTvg8dF-p7TMtRQkT35iM,3736
893
+ tomwer/tests/orangecontrib/tomwer/widgets/reconstruction/tests/test_saaxis.py,sha256=Bus-KJvmrWrMj--VyDGwLiKMOllDAuoR_TuUbFxnj4w,4191
892
894
  tomwer/tests/orangecontrib/tomwer/widgets/stitching/tests/test_zstitching.py,sha256=wp7ZNtmHryB3hS01q79F4gJIr4phC_8GtFgSRCaHUzQ,11455
893
- tomwer/tests/orangecontrib/tomwer/widgets/tests/test_conditions.py,sha256=J5039sm1slNiXoNyMNjBehrhjkp16mZ1UAL5wTDSz5w,2866
894
- tomwer/tests/orangecontrib/tomwer/widgets/tests/test_darkref.py,sha256=9rw_q3-5Iuu_n7mA8glsjSEZUbGR3uAyIcEZGg1X9aM,8182
895
- tomwer/tests/orangecontrib/tomwer/widgets/tests/test_foldertransfert.py,sha256=HXK8b2qub-DKy1d-e2nu8xCSboQwCbf2FbDGaKUHxMw,3370
896
895
  tomwer/tests/orangecontrib/tomwer/widgets/visualization/tests/test_dataviewerow.py,sha256=1Tx32WRHF9sv4kMmQbCMB2E1t3GtL1-mCHgXgN_W8sc,1530
897
896
  tomwer/tests/orangecontrib/tomwer/widgets/visualization/tests/test_diffviewerow.py,sha256=_KoPyg8fvy-Ve9XilYUqz-YIEEs-eX4u4W2D0eEdAg8,985
898
897
  tomwer/tests/orangecontrib/tomwer/widgets/visualization/tests/test_nxtomo_metadata_viewer.py,sha256=TjOSoop9qMnMTMDUowcaFjuHcE-q5IxD1kH6nAlErcY,870
@@ -903,10 +902,10 @@ tomwer/tests/orangecontrib/tomwer/widgets/visualization/tests/test_slice_stackow
903
902
  tomwer/tests/orangecontrib/tomwer/widgets/visualization/tests/test_volume_viewerow.py,sha256=PjZI0EfFfxmR0bh-RS0gmvMrNg5tZllCWePQmnmD6oQ,810
904
903
  tomwer/tests/test_ewoks/test_conversion.py,sha256=a8cEWbErXiFCAkaapi0jeEoRKYxcFQCoa-Jr_u77_OM,3656
905
904
  tomwer/tests/test_ewoks/test_single_node_execution.py,sha256=YBUHfiAnkciv_kjj7biC5fOs7c7ofNImM_azGMn4LZM,2813
906
- tomwer/tests/test_ewoks/test_workflows.py,sha256=L0vNnfGpI6Soy8b_w6OjTMhLzUSutMFhWjPOe6kZO-E,5081
907
- tomwer-1.4.0rc6.dist-info/LICENSE,sha256=62p1wL0n9WMTu8x2YDv0odYgTqeSvTd9mQ0v6Mq7lzE,1876
908
- tomwer-1.4.0rc6.dist-info/METADATA,sha256=xnN8QVB_B601WfGoPaO4IkkeSN9moqqE37_bUKJIhwg,13406
909
- tomwer-1.4.0rc6.dist-info/WHEEL,sha256=PZUExdf71Ui_so67QXpySuHtCi3-J3wvF4ORK6k_S8U,91
910
- tomwer-1.4.0rc6.dist-info/entry_points.txt,sha256=py3ZUWvGnWGc5c7Yhw_uBTm8Fmew0BDw3aQZnWMBNZI,500
911
- tomwer-1.4.0rc6.dist-info/top_level.txt,sha256=Yz5zKh0FPiImtzHYcPuztG1AO8-6KEpUWgoChGbA0Ys,21
912
- tomwer-1.4.0rc6.dist-info/RECORD,,
905
+ tomwer/tests/test_ewoks/test_workflows.py,sha256=Eq80eexf5NVL7SzvwctLOaUeuQ8V3vDiFiHgbJA4Yb8,4871
906
+ tomwer-1.4.1.dist-info/LICENSE,sha256=62p1wL0n9WMTu8x2YDv0odYgTqeSvTd9mQ0v6Mq7lzE,1876
907
+ tomwer-1.4.1.dist-info/METADATA,sha256=DrZfU31k8F-lEUAK-izfE6fr6M5DfOVHG4ecrw0OjW8,13377
908
+ tomwer-1.4.1.dist-info/WHEEL,sha256=PZUExdf71Ui_so67QXpySuHtCi3-J3wvF4ORK6k_S8U,91
909
+ tomwer-1.4.1.dist-info/entry_points.txt,sha256=py3ZUWvGnWGc5c7Yhw_uBTm8Fmew0BDw3aQZnWMBNZI,500
910
+ tomwer-1.4.1.dist-info/top_level.txt,sha256=Yz5zKh0FPiImtzHYcPuztG1AO8-6KEpUWgoChGbA0Ys,21
911
+ tomwer-1.4.1.dist-info/RECORD,,
@@ -1,64 +0,0 @@
1
- # coding: utf-8
2
- from __future__ import annotations
3
-
4
- import shutil
5
- import tempfile
6
- import unittest
7
-
8
- from tomoscan.io import HDF5File, get_swmr_mode
9
-
10
- from tomwer.core.process.task import Task
11
- from tomwer.core.utils.scanutils import MockNXtomo
12
-
13
-
14
- class TestProcessRegistration(unittest.TestCase):
15
- """
16
- Make sure utils link to the process registration are
17
- correctly working
18
- """
19
-
20
- class DummyProcess(Task):
21
- @staticmethod
22
- def program_name():
23
- """Name of the program used for this processing"""
24
- return "dummy program"
25
-
26
- @staticmethod
27
- def program_version():
28
- """version of the program used for this processing"""
29
- return "0.0.0"
30
-
31
- @staticmethod
32
- def definition():
33
- """definition of the process"""
34
- return "no definition"
35
-
36
- def setUp(self):
37
- self.tmp_dir = tempfile.mkdtemp()
38
- self.scan = MockNXtomo(scan_path=self.tmp_dir, n_proj=2).scan
39
-
40
- def tearDown(self):
41
- shutil.rmtree(self.tmp_dir)
42
-
43
- def testGetProcessNodes(self):
44
- """insure it return the last dark process based on the processing index"""
45
-
46
- for i in range(20):
47
- Task._register_process(
48
- self.scan.process_file,
49
- process=self.DummyProcess,
50
- entry=self.scan.entry,
51
- configuration=None,
52
- results={"output": i},
53
- process_index=i,
54
- )
55
-
56
- with HDF5File(self.scan.process_file, "r", swmr=get_swmr_mode()) as h5f:
57
- nodes = Task._get_process_nodes(
58
- root_node=h5f[self.scan.entry], process=self.DummyProcess
59
- )
60
- self.assertEqual(len(nodes), 20)
61
- self.assertTrue("/entry/tomwer_process_16" in nodes)
62
- self.assertEqual(nodes["/entry/tomwer_process_16"], 16)
63
- self.assertTrue("/entry/tomwer_process_1" in nodes)
64
- self.assertEqual(nodes["/entry/tomwer_process_1"], 1)
@@ -1,36 +0,0 @@
1
- # coding: utf-8
2
- # /*##########################################################################
3
- # Copyright (C) 2017 European Synchrotron Radiation Facility
4
- #
5
- # Permission is hereby granted, free of charge, to any person obtaining a copy
6
- # of this software and associated documentation files (the "Software"), to deal
7
- # in the Software without restriction, including without limitation the rights
8
- # to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
9
- # copies of the Software, and to permit persons to whom the Software is
10
- # furnished to do so, subject to the following conditions:
11
- #
12
- # The above copyright notice and this permission notice shall be included in
13
- # all copies or substantial portions of the Software.
14
- #
15
- # THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
16
- # IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
17
- # FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
18
- # AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
19
- # LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
20
- # OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
21
- # THE SOFTWARE.
22
- #
23
- #############################################################################*/
24
-
25
- """Simple definition of a singleton"""
26
-
27
-
28
- def singleton(class_):
29
- instances = {}
30
-
31
- def wrapper(*args, **kwargs):
32
- if class_ not in instances:
33
- instances[class_] = class_(*args, **kwargs)
34
- return instances[class_]
35
-
36
- return wrapper
@@ -1,58 +0,0 @@
1
- # coding: utf-8
2
- from __future__ import annotations
3
-
4
- import os
5
- from flufl.lock import Lock
6
-
7
- from tomwer.core.utils.Singleton import singleton
8
-
9
- _FILE_LOCKERS = {}
10
-
11
-
12
- def get_lock_file_path(process_file_path):
13
- process_file_path = os.path.abspath(process_file_path)
14
- parts = process_file_path.split(os.sep)
15
- if len(parts) == 0:
16
- # file without any name ???!!!
17
- raise RuntimeError
18
- elif len(parts) == 1:
19
- file_path = ""
20
- else:
21
- file_path = os.path.join(*parts[:-1])
22
- lock_name = "." + parts[-1] + ".flufllock"
23
- return os.path.join(file_path, lock_name)
24
-
25
-
26
- @singleton
27
- class FileLockerManager:
28
- """Insure that for each file we will provide at most one locker"""
29
-
30
- def __init__(self):
31
- self.__lockers = {}
32
-
33
- def clear_locker(self, file_):
34
- if file_ in self.__lockers:
35
- del self.__lockers[file_]
36
-
37
- @staticmethod
38
- def get_lock(file_name):
39
- def get_lock_file_path(file_path):
40
- file_path = os.path.abspath(file_path)
41
- parts = file_path.split(os.sep)
42
- if len(parts) == 0:
43
- # file without any name ???!!!
44
- raise RuntimeError
45
- elif len(parts) == 1:
46
- file_path = ""
47
- else:
48
- file_path = os.sep.join(parts[:-1])
49
- lock_name = "." + parts[-1] + ".flufllock"
50
- return os.path.join(file_path, lock_name)
51
-
52
- lock_file_path = get_lock_file_path(file_name)
53
- # if not os.path.exists(lock_file_path):
54
- # from pathlib import Path
55
- # Path(lock_file_path).touch()
56
- if lock_file_path not in _FILE_LOCKERS:
57
- _FILE_LOCKERS[lock_file_path] = Lock(lock_file_path, default_timeout=3)
58
- return _FILE_LOCKERS[lock_file_path]