tomwer 1.4.0rc3__py3-none-any.whl → 1.4.0rc5__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (10) hide show
  1. orangecontrib/tomwer/tutorials/test_cor.ows +19 -0
  2. tomwer/core/process/reconstruction/nabu/nabuscores.py +2 -2
  3. tomwer/core/process/reconstruction/saaxis/saaxis.py +1 -1
  4. tomwer/version.py +1 -1
  5. {tomwer-1.4.0rc3.dist-info → tomwer-1.4.0rc5.dist-info}/METADATA +1 -1
  6. {tomwer-1.4.0rc3.dist-info → tomwer-1.4.0rc5.dist-info}/RECORD +10 -9
  7. {tomwer-1.4.0rc3.dist-info → tomwer-1.4.0rc5.dist-info}/LICENSE +0 -0
  8. {tomwer-1.4.0rc3.dist-info → tomwer-1.4.0rc5.dist-info}/WHEEL +0 -0
  9. {tomwer-1.4.0rc3.dist-info → tomwer-1.4.0rc5.dist-info}/entry_points.txt +0 -0
  10. {tomwer-1.4.0rc3.dist-info → tomwer-1.4.0rc5.dist-info}/top_level.txt +0 -0
orangecontrib/tomwer/tutorials/test_cor.ows ADDED
@@ -0,0 +1,19 @@
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+ <?xml version='1.0' encoding='utf-8'?>
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+ <scheme version="2.0" title="" description="">
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+ <nodes>
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+ <node id="0" name="center of rotation finder" qualified_name="orangecontrib.tomwer.widgets.reconstruction.AxisOW.AxisOW" project_name="tomwer" version="" title="center of rotation finder" position="(375.0, 146.0)" />
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+ <node id="1" name="scan selector" qualified_name="orangecontrib.tomwer.widgets.control.DataSelectorOW.DataSelectorOW" project_name="tomwer" version="" title="scan selector" position="(150.0, 115.0)" />
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+ </nodes>
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+ <links>
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+ <link id="0" source_node_id="1" sink_node_id="0" source_channel="data" sink_channel="data" enabled="true" source_channel_id="data" sink_channel_id="data" />
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+ </links>
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+ <annotations />
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+ <thumbnail />
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+ <node_properties>
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+ <properties node_id="0" format="literal">{'_ewoks_default_inputs': {'data': None, 'axis_params': {'MODE': 'sino-coarse-to-fine', 'POSITION_VALUE': None, 'CALC_INPUT_TYPE': 'transmission_nopag', 'ANGLE_MODE': '0-180', 'SINOGRAM_LINE': 'middle', 'SINOGRAM_SUBSAMPLING': 10, 'AXIS_URL_1': '', 'AXIS_URL_2': '', 'LOOK_AT_STDMAX': False, 'NEAR_WX': 5, 'FINE_STEP_X': 0.1, 'SCALE_IMG2_TO_IMG1': False, 'NEAR_POSITION': 'right', 'PADDING_MODE': 'edge', 'FLIP_LR': True, 'COMPOSITE_OPTS': {'theta': 5, 'oversampling': 4, 'n_subsampling_y': 40, 'take_log': True, 'near_width': 40}, 'COR_OPTIONS': '', 'MOTOR_OFFSET': 0.0, 'X_ROTATION_AXIS_PIXEL_POSITION': 0.0}, 'gui': {'mode_is_lock': False, 'value_is_lock': False, 'auto_update_estimated_cor': True, 'y_axis_inverted': True}}, 'controlAreaVisible': True, 'savedWidgetGeometry': b'\x01\xd9\xd0\xcb\x00\x03\x00\x00\x00\x00\x017\x00\x00\x00\xe5\x00\x00\x06H\x00\x00\x03\xa6\x00\x00\x017\x00\x00\x01\n\x00\x00\x06H\x00\x00\x03\xa6\x00\x00\x00\x00\x00\x00\x00\x00\x07\x80\x00\x00\x017\x00\x00\x01\n\x00\x00\x06H\x00\x00\x03\xa6', '__version__': 1}</properties>
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+ <properties node_id="1" format="literal">{'_scanIDs': ['hdf5:scan:/home/payno/Datasets/tomography/bamboo_hercules/bambou_hercules_0001/bambou_hercules_0001_0000.nx?path=/entry0000'], 'controlAreaVisible': True, 'savedWidgetGeometry': b'\x01\xd9\xd0\xcb\x00\x03\x00\x00\x00\x00\n\xa0\x00\x00\x01Z\x00\x00\x0b\xcb\x00\x00\x03\x06\x00\x00\n\xa0\x00\x00\x01Z\x00\x00\x0b\xcb\x00\x00\x03\x06\x00\x00\x00\x01\x00\x00\x00\x00\x07\x80\x00\x00\n\xa0\x00\x00\x01Z\x00\x00\x0b\xcb\x00\x00\x03\x06', '__version__': 1}</properties>
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+ </node_properties>
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+ <session_state>
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+ <window_groups />
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+ </session_state>
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+ </scheme>
tomwer/core/process/reconstruction/nabu/nabuscores.py CHANGED
@@ -287,7 +287,7 @@ class _Reconstructor(_NabuBaseReconstructor):
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  )
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  results = {}
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- if self.advancement:
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+ if self.advancement is not None:
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  self.advancement.total = len(self.nabu_configs)
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  for var_value, config in self.nabu_configs.items():
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  if self._cancelled:
@@ -312,7 +312,7 @@ class _Reconstructor(_NabuBaseReconstructor):
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  process_name=self.process_name,
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  )
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  # specific treatment for cor: rename output files
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- if self.advancement:
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+ if self.advancement is not None:
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  self.advancement.update()
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  return results
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tomwer/core/process/reconstruction/saaxis/saaxis.py CHANGED
@@ -317,7 +317,7 @@ class SAAxisTask(
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  for cor in cors:
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  cor_nabu_ref = relative_pos_to_absolute(
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- relative_pos=scan.axis_params.relative_cor_value,
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+ relative_pos=cor,
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  det_width=scan.dim_1,
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  )
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  volume_identifiers = get_multi_cor_recons_volume_identifiers(
tomwer/version.py CHANGED
@@ -79,7 +79,7 @@ MAJOR = 1
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  MINOR = 4
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  MICRO = 0
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  RELEV = "rc" # <16
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- SERIAL = 3 # <16
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+ SERIAL = 5 # <16
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  date = __date__
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{tomwer-1.4.0rc3.dist-info → tomwer-1.4.0rc5.dist-info}/METADATA RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: tomwer
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- Version: 1.4.0rc3
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+ Version: 1.4.0rc5
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  Summary: "tomography workflow tools"
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  Home-page: https://gitlab.esrf.fr/tomotools/tomwer
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  Author: Henri Payno, Pierre Paleo, Pierre-Olivier Autran, Jérôme Lesaint, Alessandro Mirone
{tomwer-1.4.0rc3.dist-info → tomwer-1.4.0rc5.dist-info}/RECORD RENAMED
@@ -18,6 +18,7 @@ orangecontrib/tomwer/tutorials/simple_slice_reconstruction.ows,sha256=O9Bnunjh0Q
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  orangecontrib/tomwer/tutorials/simple_slice_reconstruction_on_slurm.ows,sha256=t-fwTMCvqQV17AIZWM0lSCmjC6loLEHNZSFmAADF9xY,6584
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  orangecontrib/tomwer/tutorials/simple_volume_local_reconstruction.ows,sha256=BBxkMX98PjDZsgxiVz4i-xPFw4WMdzif2YPnRQfONP4,5945
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  orangecontrib/tomwer/tutorials/simple_volume_to_slurm_reconstruction.ows,sha256=TxVvFAfuV-HCIq9k_J45w9VtHDhLfmsN6wWuTNVYnPI,9163
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+ orangecontrib/tomwer/tutorials/test_cor.ows,sha256=tlpNXVRRhGQR5yGMvWvVR5DqVyl1G3f8hSQ8u17hmLU,2464
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  orangecontrib/tomwer/tutorials/using_saaxis_to_find_cor.ows,sha256=TUZNkXEsQyj7Qra1GEb4IhGFDWv3uJzqXbp3P04jwbs,5192
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  orangecontrib/tomwer/tutorials/volume_casting_on_slurm.ows,sha256=yKa6pvd4UB6XDDlj_o7T8Md6bI8aQJXMCUnxyecdXbc,7568
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  orangecontrib/tomwer/tutorials/id16b/ID16b_full_volume.ows,sha256=eSxYxrZ-0WKsmDqXivsHxND7SR2dSwdgG6Wcjbr06Ew,1727
@@ -219,7 +220,7 @@ orangecontrib/tomwer/widgets/visualization/tests/__init__.py,sha256=47DEQpj8HBSa
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  tomwer/__init__.py,sha256=GeLSeY4__z-HQZu1y4ptZ5Y1OeXFvG8kuEwWXhkeaMA,360
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  tomwer/__main__.py,sha256=7tCADiS4u7k1PCxFhlRAcYSIOpxQTGUTx8sCEQ-hi1E,8707
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  tomwer/utils.py,sha256=7h7dEgKAEUmQ43jkULvC1B9Adl55nkCty-SEKUKCl4U,7008
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- tomwer/version.py,sha256=UuEkt01Y05Kcy01F62oh2NLZE9fErohrIU8VDCRcm78,4383
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+ tomwer/version.py,sha256=FFP_SSjW9EedBsRVt5VPPTylt-GUX-j-xkMwf6dL8E4,4383
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  tomwer/app/__init__.py,sha256=RYMB2YhbQaoMXC8W-oOyfZ_Y1vmHD7L13YkKeAMuShM,85
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  tomwer/app/axis.py,sha256=BJNuwMOjw1vS2w-9sKxltIgWMEWAPetnK2sAOFmXoZg,5880
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  tomwer/app/canvas.py,sha256=sM368nniUwbQXLA-oNCg1iNwMMol_ZGTKbiw8WsC4yw,1539
@@ -333,7 +334,7 @@ tomwer/core/process/reconstruction/nabu/__init__.py,sha256=47DEQpj8HBSa-_TImW-5J
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  tomwer/core/process/reconstruction/nabu/castvolume.py,sha256=4VEVnJxWfG8_Ku2uhUSQAgGfvP_08mXswmC3bHU7E4M,9317
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  tomwer/core/process/reconstruction/nabu/helical.py,sha256=gauUkoPiShvnvMQrCQXv28g0yLe-GceML5kYMSXmNIg,1997
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  tomwer/core/process/reconstruction/nabu/nabucommon.py,sha256=s1KxEzHQJ09JEWP3_EvKFe51k1boi_a8YRlbs3TppdE,23338
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- tomwer/core/process/reconstruction/nabu/nabuscores.py,sha256=SftxwaQlxN79m9b3-QhY-ROX674Y4lAXGblZfP--pMo,25251
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+ tomwer/core/process/reconstruction/nabu/nabuscores.py,sha256=e5tRG1QtmVAdXb8KHMTMtBXA3KQXqKKcqipY2HzMURg,25275
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  tomwer/core/process/reconstruction/nabu/nabuslices.py,sha256=WWvq4cx6-lklUILOEMPCjDG_r8oy-QsuCI7hGaseiAw,34919
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  tomwer/core/process/reconstruction/nabu/nabuvolume.py,sha256=O9d3PUvkk5r-YNEcOfzyPSx5DT1pu8wGXWXpQ0GhWnw,20556
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  tomwer/core/process/reconstruction/nabu/plane.py,sha256=366gWprWw8Rlob8jsMn753CqgudruvvVauU0ihH2lU4,400
@@ -348,7 +349,7 @@ tomwer/core/process/reconstruction/normalization/normalization.py,sha256=lG9eqfz
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  tomwer/core/process/reconstruction/normalization/params.py,sha256=WNCuA5A5EuiWJjvKqY309Eiaa7THocgnG7owkQFHdyc,3418
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  tomwer/core/process/reconstruction/saaxis/__init__.py,sha256=ZEOu0nZWlMyBoX_A64yeEjVflE5x4iWSpYLTgs45g0o,137
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  tomwer/core/process/reconstruction/saaxis/params.py,sha256=E16GiHpSXh28p6BIsSaWMY9y2K-yMRRhXtFf6stUFRA,4204
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- tomwer/core/process/reconstruction/saaxis/saaxis.py,sha256=KIqv94mNMRWs-sm4cLgRKQ-RoOZLuRACDSknk5-_0gU,30733
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+ tomwer/core/process/reconstruction/saaxis/saaxis.py,sha256=Bv2h4N_JlMSlIs2fj8_0SXou1gt_TcfW_HyzMPafI2Y,30701
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  tomwer/core/process/reconstruction/sadeltabeta/__init__.py,sha256=WDYJxfqPnz5IeLPCX5W8UEO8-Z-NSH79gkqp2DZn1bM,162
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  tomwer/core/process/reconstruction/sadeltabeta/params.py,sha256=ziAlTtQLy4EItIprFxDOm2Td1emHpSpnQb58niF1tI0,2691
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  tomwer/core/process/reconstruction/sadeltabeta/sadeltabeta.py,sha256=L01nI67Fhu0_mWMhncOEiFaItQirzbIbMJ0TYBFgIaE,29603
@@ -903,9 +904,9 @@ tomwer/tests/orangecontrib/tomwer/widgets/visualization/tests/test_volume_viewer
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  tomwer/tests/test_ewoks/test_conversion.py,sha256=a8cEWbErXiFCAkaapi0jeEoRKYxcFQCoa-Jr_u77_OM,3656
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  tomwer/tests/test_ewoks/test_single_node_execution.py,sha256=YBUHfiAnkciv_kjj7biC5fOs7c7ofNImM_azGMn4LZM,2813
905
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  tomwer/tests/test_ewoks/test_workflows.py,sha256=L0vNnfGpI6Soy8b_w6OjTMhLzUSutMFhWjPOe6kZO-E,5081
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- tomwer-1.4.0rc3.dist-info/LICENSE,sha256=62p1wL0n9WMTu8x2YDv0odYgTqeSvTd9mQ0v6Mq7lzE,1876
907
- tomwer-1.4.0rc3.dist-info/METADATA,sha256=3izJhmCSSMMMnTD2V-ixLN46I6rYAWSear15PeMWW3Q,13406
908
- tomwer-1.4.0rc3.dist-info/WHEEL,sha256=PZUExdf71Ui_so67QXpySuHtCi3-J3wvF4ORK6k_S8U,91
909
- tomwer-1.4.0rc3.dist-info/entry_points.txt,sha256=py3ZUWvGnWGc5c7Yhw_uBTm8Fmew0BDw3aQZnWMBNZI,500
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- tomwer-1.4.0rc3.dist-info/top_level.txt,sha256=Yz5zKh0FPiImtzHYcPuztG1AO8-6KEpUWgoChGbA0Ys,21
911
- tomwer-1.4.0rc3.dist-info/RECORD,,
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+ tomwer-1.4.0rc5.dist-info/LICENSE,sha256=62p1wL0n9WMTu8x2YDv0odYgTqeSvTd9mQ0v6Mq7lzE,1876
908
+ tomwer-1.4.0rc5.dist-info/METADATA,sha256=QA9gfoxWjJo6mP5qwOFn1N4Kts1szVa8TSAQ4yUEkb4,13406
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+ tomwer-1.4.0rc5.dist-info/WHEEL,sha256=PZUExdf71Ui_so67QXpySuHtCi3-J3wvF4ORK6k_S8U,91
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+ tomwer-1.4.0rc5.dist-info/entry_points.txt,sha256=py3ZUWvGnWGc5c7Yhw_uBTm8Fmew0BDw3aQZnWMBNZI,500
911
+ tomwer-1.4.0rc5.dist-info/top_level.txt,sha256=Yz5zKh0FPiImtzHYcPuztG1AO8-6KEpUWgoChGbA0Ys,21
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+ tomwer-1.4.0rc5.dist-info/RECORD,,