tomwer 1.3.0rc9__py3-none-any.whl → 1.3.0rc10__py3-none-any.whl

tomwer/core/scan/nxtomoscan.py

@@ -45,7 +45,7 @@ from tomoscan.esrf.identifier.hdf5Identifier import (
 )
 from tomoscan.esrf.identifier.url_utils import UrlSettings, split_path, split_query
 from tomoscan.esrf.scan.nxtomoscan import NXtomoScan as _tsNXtomoScan
-from tomoscan.io import HDF5File
+from tomoscan.io import HDF5File, get_swmr_mode
 from nxtomo.nxobject.nxdetector import ImageKey
 
 from tomwer.utils import docstring
@@ -422,7 +422,7 @@ class NXtomoScan(_tsNXtomoScan, TomwerScanBase):
             return tuple()
         else:
             res = []
-            with HDF5File(file_path, mode="r", swmr=True) as h5s:
+            with HDF5File(file_path, mode="r", swmr=get_swmr_mode()) as h5s:
                 for entry_name, node in h5s.items():
                     if isinstance(node, h5py.Group):
                         if NXtomoScan.entry_is_nx_tomo(node):

tomwer/core/scan/scanbase.py

@@ -41,7 +41,7 @@ import numpy
 from silx.io.url import DataUrl
 from silx.utils.enum import Enum as _Enum
 from tomoscan.identifier import VolumeIdentifier
-from tomoscan.io import HDF5File
+from tomoscan.io import HDF5File, get_swmr_mode
 from tomoscan.normalization import IntensityNormalization
 from tomoscan.volumebase import VolumeBase
 from tomoscan.identifier import BaseIdentifier
@@ -131,7 +131,7 @@ class TomwerScanBase(TomwerObject):
             and self.process_file is not None
             and os.path.exists(self.process_file)
         ):
-            with HDF5File(self.process_file, mode="r", swmr=True) as h5s:
+            with HDF5File(self.process_file, mode="r", swmr=get_swmr_mode()) as h5s:
                 self._process_index = len(h5s.items())
         else:
             self._process_index = 0
@@ -756,7 +756,7 @@ class TomwerScanBase(TomwerObject):
         from tomwer.core.process.task import Task
 
         if os.path.exists(self.process_file):
-            with HDF5File(self.process_file, mode="r", swmr=True) as h5s:
+            with HDF5File(self.process_file, mode="r", swmr=get_swmr_mode()) as h5s:
                 if not hasattr(self, "entry"):
                     entry = "entry"
                 else:
@@ -864,7 +864,9 @@ def _get_reconstructed_single_file_volume(
 
                 if check_url is True:
                     try:
-                        with HDF5File(os.path.abspath(file_), "r", swmr=True) as h5f:
+                        with HDF5File(
+                            os.path.abspath(file_), "r", swmr=get_swmr_mode()
+                        ) as h5f:
                             if entry not in h5f:
                                 logger.info("{volume} does not exists")
                                 return None

tomwer/core/scan/test/test_process_registration.py

@@ -32,7 +32,7 @@ import shutil
 import tempfile
 import unittest
 
-from tomoscan.io import HDF5File
+from tomoscan.io import HDF5File, get_swmr_mode
 
 from tomwer.core.process.task import Task
 from tomwer.core.utils.scanutils import MockNXtomo
@@ -98,7 +98,7 @@ class TestProcessRegistration(unittest.TestCase):
                 process_index=i,
             )
 
-        with HDF5File(self.scan.process_file, "r", swmr=True) as h5f:
+        with HDF5File(self.scan.process_file, "r", swmr=get_swmr_mode()) as h5f:
             nodes = Task._get_process_nodes(
                 root_node=h5f[self.scan.entry], process=self.DummyProcess
             )

tomwer/core/settings.py

@@ -125,7 +125,7 @@ class SlurmSettings:
     N_JOBS = 1
     """on how many job we want to split the EwoksTask"""
 
-    MEMORY_PER_WORKER = 64  # memory in GB
+    MEMORY_PER_WORKER = 128  # memory in GB
     """Amount of memory per worker"""
 
     PARTITION = "p9gpu"
@@ -136,7 +136,7 @@ class SlurmSettings:
     N_GPUS_PER_WORKER = 1
     """number of gpu per worker"""
 
-    PYTHON_VENV = "/scisoft/tomotools/activate stable"
+    PYTHON_VENV = None
     """Python executable to take. Useful if compute nodes have a different environment from the front end.
     """
 
@@ -144,7 +144,7 @@ class SlurmSettings:
     """Slurm cluster project name. `scan`, `process` and `info` will be format.
     """
 
-    MODULES_TO_LOAD = tuple()  # in the future might be 'tomotools'. In this case we must remove the PYTHON_VENV
+    MODULES_TO_LOAD = ("tomotools/stable", )
 
     SBATCH_EXTRA_PARAMS = {
         "export": "NONE",  # value to provide to sbatch --export={}

tomwer/gui/cluster/slurm.py

@@ -168,6 +168,7 @@ class SlurmSettingsWindow(qt.QMainWindow):
                         "job_name": settingsClass.PROJECT_NAME,
                         "walltime": settingsClass.DEFAULT_WALLTIME,
                         "python_venv": settingsClass.PYTHON_VENV,
+                        "modules": settingsClass.MODULES_TO_LOAD,
                     }
                 )
 
@@ -270,7 +271,7 @@ class SlurmSettingsWidget(qt.QWidget):
         self.layout().addRow(self._preProcessingGroup)
 
         # python venv
-        self._pythonVenv = qt.QLineEdit("", self)
+        self._pythonVenv = qt.QLineEdit("/scisoft/tomotools/activate stable", self)
         self._sourceScriptCB = qt.QRadioButton("source script (python venv)", self)
         self._preProcessingButtonGroup.addButton(self._sourceScriptCB)
         self._preProcessingGroup.layout().addRow(self._sourceScriptCB, self._pythonVenv)
@@ -280,13 +281,13 @@ class SlurmSettingsWidget(qt.QWidget):
             """
         )
 
-        self._modulesQLE = qt.QLineEdit("tomotools,", self)
-        self._modulesCB = qt.QRadioButton("module to load", self)
+        self._modulesQLE = qt.QLineEdit(", ".join(SlurmSettings.MODULES_TO_LOAD), self)
+        self._modulesCB = qt.QRadioButton("module(s) to load", self)
         self._preProcessingButtonGroup.addButton(self._modulesCB)
         self._preProcessingGroup.layout().addRow(self._modulesCB, self._modulesQLE)
         self._preProcessingGroup.setToolTip(
             """
-            Optional list of modules to load before executing the script.
+            Optional list of modules to load before executing the script. each module must be separated by a coma
             """
         )
 
@@ -372,8 +373,7 @@ class SlurmSettingsWidget(qt.QWidget):
         self._nGpu.setValue(n_gpu)
         self._jobName.setText(SlurmSettings.PROJECT_NAME)
         self._wallTimeQLE.setText(SlurmSettings.DEFAULT_WALLTIME)
-        self._pythonVenv.setText(SlurmSettings.PYTHON_VENV)
-        self._sourceScriptCB.setChecked(True)
+        self._modulesCB.setChecked(True)  # by default we go for modules
         self._preProcessingModeChanged()
         self._partitionChanged()
         self._nGpuChanged()
@@ -569,7 +569,7 @@ class SlurmSettingsWidget(qt.QWidget):
         self.sigConfigChanged.emit()
 
     def getConfiguration(self) -> dict:
-        return {
+        config = {
             "cpu-per-task": self.getNCores(),
             "n_tasks": self.getNWorkers(),
             "n_jobs": self.getNJobs(),
@@ -578,10 +578,15 @@ class SlurmSettingsWidget(qt.QWidget):
             "n_gpus": self.getNGPU(),
             "job_name": self.getProjectName(),
             "walltime": self.getWallTime(),
-            "python_venv": self.getPythonExe(),
-            "modules": self.getModulesToLoad(),
             "sbatch_extra_params": self.getSBatchExtraParams(),
         }
+        if self._modulesCB.isChecked():
+            config["modules"] = self.getModulesToLoad()
+        elif self._sourceScriptCB.isChecked():
+            config["python_venv"] = self.getPythonExe()
+        else:
+            raise ValueError("'modules' or python environement should be enable")
+        return config
 
     def getSlurmClusterConfiguration(self):
         from tomwer.core.cluster import SlurmClusterConfiguration

tomwer/gui/cluster/test/test_cluster.py

@@ -61,9 +61,8 @@ class TestSlurmWidget(TestCaseQt):
             "partition": SlurmSettings.PARTITION,
             "n_gpus": SlurmSettings.N_GPUS_PER_WORKER,
             "job_name": "tomwer_{scan}_-_{process}_-_{info}",
-            "modules": tuple(),
             "n_jobs": 1,
-            "python_venv": "/scisoft/tomotools/activate stable",
+            "modules": ("tomotools/stable",),
             "walltime": "01:00:00",
             "sbatch_extra_params": {
                 "export": "NONE",

tomwer/gui/control/datawatcher/controlwidget.py

@@ -99,10 +99,8 @@ class ControlWidget(qt.QWidget):
         """
         Ask the user the path to the folder to observe
         """
-        defaultDirectory = self.getFolderObserved()
+        defaultDirectory = self._qteFolderSelected.text()
         if defaultDirectory is None or not os.path.isdir(defaultDirectory):
-            if os.path.isdir(self.DEFAULT_DIRECTORY):
-                defaultDirectory = self.DEFAULT_DIRECTORY
             if defaultDirectory is None:
                 defaultDirectory = get_default_directory()
 
@@ -113,4 +111,4 @@ class ControlWidget(qt.QWidget):
             dialog.close()
             return
 
-        self.setFolderObserved(dialog.selectedFiles()[0])
+        self._qteFolderSelected.setText(dialog.selectedFiles()[0])

tomwer/gui/control/reducedarkflatselector.py

@@ -12,7 +12,7 @@ from silx.gui.dialog.DataFileDialog import DataFileDialog
 
 from tomoscan.esrf.scan.utils import cwd_context
 from tomoscan.framereducer.target import REDUCER_TARGET
-from tomoscan.io import HDF5File
+from tomoscan.io import HDF5File, get_swmr_mode
 
 from tomwer.io.utils import get_default_directory
 
@@ -249,7 +249,7 @@ class ReduceDarkFlatSelectorTableWidget(qt.QWidget):
         if not os.path.exists(file_path):
             _logger.error(f"file doesn't exists ({file_path})")
 
-        with HDF5File(file_path, mode="r", swmr=True) as h5f:
+        with HDF5File(file_path, mode="r", swmr=get_swmr_mode()) as h5f:
             entries = tuple(h5f.keys())
 
         res = []

tomwer/gui/edit/dkrfpatch.py

@@ -37,7 +37,7 @@ from silx.gui.dialog.DataFileDialog import DataFileDialog
 from silx.io.url import DataUrl
 from silx.io.utils import h5py_read_dataset
 from nxtomo.nxobject.nxdetector import ImageKey
-from tomoscan.io import HDF5File
+from tomoscan.io import HDF5File, get_swmr_mode
 
 import tomwer.core.utils.nxtomoutils as nxtomo_utils
 from tomwer.core.scan.nxtomoscan import NXtomoScan
@@ -83,7 +83,7 @@ class _DarkOrFlatUrl(qt.QWidget):
         url = self._redirectDataPath(url, logger=_logger)
 
         def dataset_invalid(url):
-            with HDF5File(url.file_path(), mode="r", swmr=True) as h5s:
+            with HDF5File(url.file_path(), mode="r", swmr=get_swmr_mode()) as h5s:
                 if not isinstance(h5s[url.data_path()], h5py.Dataset):
                     return True
             return False
@@ -113,7 +113,7 @@ class _DarkOrFlatUrl(qt.QWidget):
 
     def _redirectDataPath(self, url, logger=None):
         try:
-            with HDF5File(url.file_path(), mode="r", swmr=True) as h5s:
+            with HDF5File(url.file_path(), mode="r", swmr=get_swmr_mode()) as h5s:
                 node = h5s[url.data_path()]
 
                 if NXtomoScan.entry_is_nx_tomo(node):
@@ -188,7 +188,7 @@ class _DarkOrFlatUrl(qt.QWidget):
     def _getImageKey(self, url):
         # if we are on a 'detector / data dataset' then we can try to reach
         # image_key information
-        with HDF5File(url.file_path(), mode="r", swmr=True) as h5s:
+        with HDF5File(url.file_path(), mode="r", swmr=get_swmr_mode()) as h5s:
             dataset = h5s[url.data_path()]
             grp_parent = dataset.parent
             if grp_parent is not None and NXtomoScan.is_nxdetector(grp_parent):

tomwer/gui/edit/nxtomowarmer.py

@@ -3,7 +3,7 @@ import h5py
 from silx.gui import qt
 from tomwer.core.scan.nxtomoscan import NXtomoScan
 from tomwer.gui import icons
-from tomoscan.io import HDF5File
+from tomoscan.io import HDF5File, get_swmr_mode
 
 
 class NXtomoProxyWarmer(qt.QWidget):
@@ -44,7 +44,7 @@ class NXtomoProxyWarmer(qt.QWidget):
         if scan is None:
             self._activateWarning(False)
         elif isinstance(scan, NXtomoScan):
-            with HDF5File(scan.master_file, mode="r", swmr=True) as h5f:
+            with HDF5File(scan.master_file, mode="r", swmr=get_swmr_mode()) as h5f:
                 entry = h5f.get(
                     name=scan.entry, getclass=True, getlink=True, default=None
                 )

tomwer/gui/imagefromfile.py

@@ -34,7 +34,7 @@ import logging
 
 from silx.gui import qt
 from silx.io.url import DataUrl
-from tomoscan.io import HDF5File
+from tomoscan.io import HDF5File, get_swmr_mode
 
 from tomwer.core.scan.scanbase import TomwerScanBase
 from tomwer.synctools.imageloaderthread import ImageLoaderThread
@@ -71,7 +71,7 @@ class ImageFromFile(_Image):
 
                 def get_nabu_entry():
                     try:
-                        with HDF5File(_file, mode="r", swmr=True) as h5s:
+                        with HDF5File(_file, mode="r", swmr=get_swmr_mode()) as h5s:
                             for node in h5s:
                                 if "reconstruction" in h5s[node]:
                                     return "/".join(

tomwer/gui/reconstruction/darkref/darkrefwidget.py

@@ -198,7 +198,8 @@ class _TabGeneral(qt.QWidget):
         self._grpOptions = qt.QGroupBox("options", parent=self)
         self._grpOptions.setLayout(qt.QVBoxLayout())
         self._rmOptionCB = qt.QCheckBox(
-            parent=self._grpOptions, text="remove raw files when done"
+            parent=self._grpOptions,
+            text="remove raw EDF files when done (for spec only)",
         )
         self.sigRmToggled = self._rmOptionCB.toggled
         self._skipOptionCB = qt.QCheckBox(

tomwer/gui/test/test_axis_gui.py

@@ -14,27 +14,21 @@ class TestGetNabuCorOpts(TestCaseQt):
         """
         axis_params = QAxisRP()
         widget = AxisTabWidget(recons_params=axis_params)
-        assert (
-            axis_params.get_nabu_cor_options_as_str()
-            == "side='right' ; near_pos=ignore"
-        )
+        assert axis_params.get_nabu_cor_options_as_str() == "side='right'"
         widget._calculationWidget._corOpts.setText("low_pass=2")
         widget._calculationWidget._corOpts.editingFinished.emit()
         self.qapp.processEvents()
-        assert (
-            axis_params.get_nabu_cor_options_as_str()
-            == "side='right' ; near_pos=ignore ; low_pass=2"
-        )
+        assert axis_params.get_nabu_cor_options_as_str() == "side='right' ; low_pass=2"
         widget._calculationWidget._corOpts.setText("low_pass=2 ; high_pass=10")
         widget._calculationWidget._corOpts.editingFinished.emit()
         self.qapp.processEvents()
         assert axis_params.get_nabu_cor_options_as_str() == (
-            "side='right' ; near_pos=ignore ; low_pass=2 ; high_pass=10"
+            "side='right' ; low_pass=2 ; high_pass=10"
         )
         widget._calculationWidget._sideCB.setCurrentText("left")
         widget._calculationWidget._corOpts.editingFinished.emit()
         self.qapp.processEvents()
         assert (
             axis_params.get_nabu_cor_options_as_str()
-            == "side='left' ; near_pos=ignore ; low_pass=2 ; high_pass=10"
+            == "side='left' ; low_pass=2 ; high_pass=10"
         )

tomwer/gui/visualization/volumeviewer.py

@@ -15,7 +15,7 @@ from tomoscan.esrf.volume.hdf5volume import HDF5Volume
 from tomoscan.factory import Factory
 from tomoscan.identifier import VolumeIdentifier
 from tomoscan.volumebase import VolumeBase
-from tomoscan.io import HDF5File
+from tomoscan.io import HDF5File, get_swmr_mode
 
 from tomwer.core.scan.scanbase import TomwerScanBase
 from tomwer.gui.visualization.reconstructionparameters import ReconstructionParameters
@@ -300,7 +300,7 @@ class VolumeViewer(qt.QMainWindow):
         self._close_h5_file()
         if isinstance(volume, HDF5Volume):
             self._h5_file = HDF5File(
-                filename=volume.data_url.file_path(), mode="r", swmr=True
+                filename=volume.data_url.file_path(), mode="r", swmr=get_swmr_mode()
             )
             if volume.data_url.data_path() in self._h5_file:
                 data = self._h5_file[volume.data_url.data_path()]
@@ -380,30 +380,32 @@ class VolumeViewer(qt.QMainWindow):
                     f"Volume should be an instance of a Volume, a VolumeIdentifier or a string refering to a VolumeIdentifier. {type(volume)} provided"
                 )
 
+            # warning: load metadata before data because can get some conflict with the HDF5 reader flag if done after
+            try:
+                # warning: limitation expected for .vol as it gets two configuration file. The default one is vol.info and does not contains
+                # any of the metadata 'distance', 'pixel size'... but it is here for backward compatiblity
+                self._reconsWidget.setVolumeMetadata(
+                    volume.metadata or volume.load_metadata()
+                )
+            except Exception as e:
+                _logger.info(
+                    f"Unable to set reconstruction parameters from {volume.data_url}. Not handled for pyhst reconstructions. Error is {e}"
+                )
+
             data, state = self._get_data_volume(volume)
             # set volume dataset
             if state == "loading":
                 self._waitingOverlay.show()
-                pass
             elif state == "loaded":
                 self._waitingOverlay.hide()
                 if data is not None:
                     self._set_volume(data)
+
             elif state == "failed":
                 _logger.warning(
                     f"Failed to load data from {volume.get_identifier().to_str()}"
                 )
-                # set reconstruction parameters
-                try:
-                    # warning: limitation expected for .vol as it gets two configuration file. The default one is vol.info and does not contains
-                    # any of the metadata 'distance', 'pixel size'... but it is here for backward compatiblity
-                    self._reconsWidget.setVolumeMetadata(
-                        volume.metadata or volume.load_metadata()
-                    )
-                except Exception as e:
-                    _logger.info(
-                        f"Unable to set reconstruction parameters from {volume.data_url}. Not handled for pyhst reconstructions. Error is {e}"
-                    )
+                return
 
     def _set_volume(self, volume: Union[numpy.ndarray, h5py.Dataset]):
         self._centralWidget.setData(volume)

tomwer/io/utils/h5pyutils.py

@@ -35,7 +35,7 @@ import contextlib
 
 import h5py
 from silx.io.url import DataUrl
-from tomoscan.io import HDF5File
+from tomoscan.io import HDF5File, get_swmr_mode
 
 
 class _BaseReader(contextlib.AbstractContextManager):
@@ -61,7 +61,7 @@ class EntryReader(_BaseReader):
 
     def __enter__(self):
         self._file_handler = HDF5File(
-            filename=self._url.file_path(), mode="r", swmr=True
+            filename=self._url.file_path(), mode="r", swmr=get_swmr_mode()
         )
         entry = self._file_handler[self._url.data_path()]
         if not isinstance(entry, h5py.Group):
@@ -74,7 +74,7 @@ class DatasetReader(_BaseReader):
 
     def __enter__(self):
         self._file_handler = HDF5File(
-            filename=self._url.file_path(), mode="r", swmr=True
+            filename=self._url.file_path(), mode="r", swmr=get_swmr_mode()
         )
         entry = self._file_handler[self._url.data_path()]
         if not isinstance(entry, h5py.Dataset):

tomwer/io/utils/utils.py

@@ -39,7 +39,7 @@ import numpy.lib.npyio
 from PIL import Image
 from tomoscan.esrf import has_glymur
 from tomoscan.esrf.scan.utils import get_data as tomoscan_get_data
-from tomoscan.io import HDF5File
+from tomoscan.io import HDF5File, get_swmr_mode
 from typing import Union
 
 from tomwer.core.utils import ftseriesutils
@@ -201,7 +201,7 @@ def get_linked_files_with_entry(hdf5_file: str, entry: str) -> set:
             if item in treated_items:
                 continue
             dirname = os.path.dirname(abs_file_path)
-            with HDF5File(abs_file_path, mode="r", swmr=True) as h5f:
+            with HDF5File(abs_file_path, mode="r", swmr=get_swmr_mode()) as h5f:
                 node = h5f.get(data_path, getlink=True)
                 if isinstance(node, h5py.ExternalLink):
                     ext_file_path = node.filename
@@ -252,7 +252,7 @@ def get_linked_files_with_vds(hdf5_file: str, dataset_path: str) -> set:
             if item in treated_items:
                 continue
             dirname = os.path.dirname(abs_file_path)
-            with HDF5File(abs_file_path, mode="r", swmr=True) as h5f:
+            with HDF5File(abs_file_path, mode="r", swmr=get_swmr_mode()) as h5f:
                 dataset = h5f[dataset_path]
                 if dataset.is_virtual:
                     for vs_info in dataset.virtual_sources():

tomwer/version.py

@@ -79,7 +79,7 @@ MAJOR = 1
 MINOR = 3
 MICRO = 0
 RELEV = "rc"  # <16
-SERIAL = 9  # <16
+SERIAL = 10  # <16
 
 date = __date__
 

{tomwer-1.3.0rc9.dist-info → tomwer-1.3.0rc10.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: tomwer
-Version: 1.3.0rc9
+Version: 1.3.0rc10
 Summary: "tomography workflow tools"
 Home-page: https://gitlab.esrf.fr/tomotools/tomwer
 Author: data analysis unit
@@ -26,7 +26,7 @@ Requires-Dist: setuptools
 Requires-Dist: psutil
 Requires-Dist: silx[full] >=2.0
 Requires-Dist: tomoscan >=2.0.0a11
-Requires-Dist: nxtomo >=1.0.4
+Requires-Dist: nxtomo >=1.2.3rc1
 Requires-Dist: nxtomomill >=1.0dev
 Requires-Dist: processview >=1.3
 Requires-Dist: ewoks >=0.1.1
@@ -75,7 +75,7 @@ Requires-Dist: resource ; extra == 'dev'
 Requires-Dist: tifffile ; extra == 'dev'
 Requires-Dist: hdf5plugin ; extra == 'dev'
 Requires-Dist: pyicat-plus ; extra == 'dev'
-Requires-Dist: nabu[full] >=2023.3.0dev ; extra == 'dev'
+Requires-Dist: nabu[full] >=2023.3.1dev ; extra == 'dev'
 Requires-Dist: pycuda ; extra == 'dev'
 Requires-Dist: scikit-cuda ; extra == 'dev'
 Requires-Dist: black ; extra == 'dev'
@@ -100,7 +100,7 @@ Requires-Dist: resource ; extra == 'dev_no_cuda'
 Requires-Dist: tifffile ; extra == 'dev_no_cuda'
 Requires-Dist: hdf5plugin ; extra == 'dev_no_cuda'
 Requires-Dist: pyicat-plus ; extra == 'dev_no_cuda'
-Requires-Dist: nabu >=2023.3.0dev ; extra == 'dev_no_cuda'
+Requires-Dist: nabu >=2023.3.1dev ; extra == 'dev_no_cuda'
 Requires-Dist: black ; extra == 'dev_no_cuda'
 Requires-Dist: flake8 ; extra == 'dev_no_cuda'
 Requires-Dist: timeout-decorator ; extra == 'dev_no_cuda'
@@ -123,7 +123,7 @@ Requires-Dist: resource ; extra == 'doc'
 Requires-Dist: tifffile ; extra == 'doc'
 Requires-Dist: hdf5plugin ; extra == 'doc'
 Requires-Dist: pyicat-plus ; extra == 'doc'
-Requires-Dist: nabu >=2023.3.0dev ; extra == 'doc'
+Requires-Dist: nabu >=2023.3.1dev ; extra == 'doc'
 Requires-Dist: Sphinx >=4.0.0 ; extra == 'doc'
 Requires-Dist: nbsphinx ; extra == 'doc'
 Requires-Dist: pandoc ; extra == 'doc'
@@ -149,7 +149,7 @@ Requires-Dist: resource ; extra == 'full'
 Requires-Dist: tifffile ; extra == 'full'
 Requires-Dist: hdf5plugin ; extra == 'full'
 Requires-Dist: pyicat-plus ; extra == 'full'
-Requires-Dist: nabu[full] >=2023.3.0dev ; extra == 'full'
+Requires-Dist: nabu[full] >=2023.3.1dev ; extra == 'full'
 Requires-Dist: pycuda ; extra == 'full'
 Requires-Dist: scikit-cuda ; extra == 'full'
 Provides-Extra: full_no_cuda
@@ -170,7 +170,7 @@ Requires-Dist: resource ; extra == 'full_no_cuda'
 Requires-Dist: tifffile ; extra == 'full_no_cuda'
 Requires-Dist: hdf5plugin ; extra == 'full_no_cuda'
 Requires-Dist: pyicat-plus ; extra == 'full_no_cuda'
-Requires-Dist: nabu >=2023.3.0dev ; extra == 'full_no_cuda'
+Requires-Dist: nabu >=2023.3.1dev ; extra == 'full_no_cuda'
 Provides-Extra: full_no_nabu
 Requires-Dist: orange-canvas-core ; extra == 'full_no_nabu'
 Requires-Dist: orange-widget-base ; extra == 'full_no_nabu'
@@ -194,7 +194,7 @@ Requires-Dist: setuptools ; extra == 'setup_requires'
 Requires-Dist: numpy >=1.12 ; extra == 'setup_requires'
 Provides-Extra: test
 Requires-Dist: pytest-asyncio ; extra == 'test'
-Requires-Dist: tomoscan[test] >=2.0.0a11 ; extra == 'test'
+Requires-Dist: tomoscan[test] >=2.0.2rc17 ; extra == 'test'
 
 tomwer
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