tomwer 1.3.0a0__py3-none-any.whl → 1.3.0.dev2__py3-none-any.whl

tomwer/core/process/reconstruction/nabu/nabuscores.py

@@ -19,6 +19,7 @@ import os
 from copy import deepcopy
 import subprocess
 from typing import Iterable, Optional, Union
+import numpy
 
 from nabu.pipeline.fullfield.nabu_config import (
     nabu_config as nabu_fullfield_default_config,
@@ -173,6 +174,12 @@ def run_nabu_multicor(
     else:
         process_name = ""
 
+    # TODO: FIXME small hack to make sure the configuration will be accepted when valie
+    # for now even if the cor values are given from a dedicated parameter nabu is still
+    # checking the value provided in the config file. If this value is invalid for
+    # half acquisition it will be refused
+    nabu_config["reconstruction"]["rotation_axis_position"] = numpy.mean(cors)
+
     reconstructor = _ReconstructorMultiCor(
         scan=scan,
         nabu_config=nabu_config,

tomwer/version.py

@@ -78,8 +78,8 @@ RELEASE_LEVEL_VALUE = {
 MAJOR = 1
 MINOR = 3
 MICRO = 0
-RELEV = "alpha"  # <16
-SERIAL = 0  # <16
+RELEV = "dev"  # <16
+SERIAL = 2  # <16
 
 date = __date__
 

{tomwer-1.3.0a0.dist-info → tomwer-1.3.0.dev2.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: tomwer
-Version: 1.3.0a0
+Version: 1.3.0.dev2
 Summary: "tomography workflow tools"
 Home-page: https://gitlab.esrf.fr/tomotools/tomwer
 Author: data analysis unit
@@ -170,6 +170,24 @@ Requires-Dist: tifffile ; extra == 'full_no_cuda'
 Requires-Dist: hdf5plugin ; extra == 'full_no_cuda'
 Requires-Dist: pyicat-plus ; extra == 'full_no_cuda'
 Requires-Dist: nabu (>=2023.3.0dev) ; extra == 'full_no_cuda'
+Provides-Extra: full_no_nabu
+Requires-Dist: orange-canvas-core ; extra == 'full_no_nabu'
+Requires-Dist: orange-widget-base ; extra == 'full_no_nabu'
+Requires-Dist: ewoks[orange] (>=0.1.1) ; extra == 'full_no_nabu'
+Requires-Dist: rsyncmanager ; extra == 'full_no_nabu'
+Requires-Dist: graypy ; extra == 'full_no_nabu'
+Requires-Dist: fabio ; extra == 'full_no_nabu'
+Requires-Dist: h5py (>=3) ; extra == 'full_no_nabu'
+Requires-Dist: lxml ; extra == 'full_no_nabu'
+Requires-Dist: werkzeug ; extra == 'full_no_nabu'
+Requires-Dist: json-rpc ; extra == 'full_no_nabu'
+Requires-Dist: scipy ; extra == 'full_no_nabu'
+Requires-Dist: Pillow ; extra == 'full_no_nabu'
+Requires-Dist: glymur ; extra == 'full_no_nabu'
+Requires-Dist: resource ; extra == 'full_no_nabu'
+Requires-Dist: tifffile ; extra == 'full_no_nabu'
+Requires-Dist: hdf5plugin ; extra == 'full_no_nabu'
+Requires-Dist: pyicat-plus ; extra == 'full_no_nabu'
 Provides-Extra: setup_requires
 Requires-Dist: setuptools ; extra == 'setup_requires'
 Requires-Dist: numpy (>=1.12) ; extra == 'setup_requires'

{tomwer-1.3.0a0.dist-info → tomwer-1.3.0.dev2.dist-info}/RECORD

@@ -1,4 +1,4 @@
-tomwer-1.3.0a0-py3.11-nspkg.pth,sha256=xeeGR3TjdoVxdFeF6T-zSwZWh6Et--EYuPWu67LxL_c,574
+tomwer-1.3.0.dev2-py3.11-nspkg.pth,sha256=xeeGR3TjdoVxdFeF6T-zSwZWh6Et--EYuPWu67LxL_c,574
 orangecontrib/tomwer/__init__.py,sha256=B4DXy1gY_wXmNYa2aOfapmJb2mEuCAjoaNEGnpBs70g,148
 orangecontrib/tomwer/state_summary.py,sha256=5_dPzweL3r0ye4ZfJo6IV2ThJI8fQhWoO2ySdJJajj8,1711
 orangecontrib/tomwer/orange/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
@@ -224,7 +224,7 @@ orangecontrib/tomwer/widgets/visualization/icons/volumeviewer.svg,sha256=2uT9_px
 tomwer/__init__.py,sha256=82Jp1abyG4UWdGuT4nNU7LxaUV6xxkOte5pIz3w69Do,1745
 tomwer/__main__.py,sha256=65ohoCNpuwo7nvCGM5OeYazVDaD0LoAA3EoOzpoLyms,8878
 tomwer/utils.py,sha256=EgVwJ5CQVjoBvcKNwyVoXv_P4ciI11oxb8fNyy82Lck,8465
-tomwer/version.py,sha256=d2jDBVypWo0MB6FfEIGWF4o0UqiPMi6zd2dBDxPfPvU,4386
+tomwer/version.py,sha256=iiEyPit5qESU0GWRLvgBqqaShEwMWgJfgUTtvu9hKWA,4384
 tomwer/app/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 tomwer/app/axis.py,sha256=UQNxYpHzxnGdNpkV6sJoO_0tPGCxJkylghwbA7ENsM0,5948
 tomwer/app/canvas.py,sha256=RbQqgE7DuNjv4nGG6BNfnSevQO5_lCl7N71hGcLoxwE,1561
@@ -332,7 +332,7 @@ tomwer/core/process/reconstruction/nabu/__init__.py,sha256=47DEQpj8HBSa-_TImW-5J
 tomwer/core/process/reconstruction/nabu/castvolume.py,sha256=-V0FubAiBEdMPDgp3ovr0dAYeEzwrQbw_W0R3w8P4YQ,10237
 tomwer/core/process/reconstruction/nabu/helical.py,sha256=gauUkoPiShvnvMQrCQXv28g0yLe-GceML5kYMSXmNIg,1997
 tomwer/core/process/reconstruction/nabu/nabucommon.py,sha256=2Puy0tbVJXAe6xuYN8pHdXVVDzI6kvcbvlH8Eorra-4,23637
-tomwer/core/process/reconstruction/nabu/nabuscores.py,sha256=ucOezqybPddUgJwRmZbBfkekOg-6FcJ1QGkQVmpLlL8,23939
+tomwer/core/process/reconstruction/nabu/nabuscores.py,sha256=V3xHOYqiJHAJdnY0DRz8hO1HRSR9wcBRQyM-FZA08Nw,24333
 tomwer/core/process/reconstruction/nabu/nabuslices.py,sha256=jP074_K2Px_QlOx4gMgwONj8j0LwlrVUBnWvzGZv7QU,36802
 tomwer/core/process/reconstruction/nabu/nabuvolume.py,sha256=0Gkkee35PwlvGAukVRIlQJKoz0dXcmuwVKOxEnXECzw,21498
 tomwer/core/process/reconstruction/nabu/settings.py,sha256=JpHKf0smiXeWC8i9Mj7h3g67teJ3Gqycd-Uwg2yzGOQ,2279
@@ -814,10 +814,10 @@ tomwer/tests/datasets.py,sha256=Gz-gUkrKmE6WXjyXQUKKdSn-czEArrGZxgiXDbM76IA,335
 tomwer/tests/test_scripts.py,sha256=4Oyl_Xq1f81w-EiYSEoAI3rHUX6vMQimzFrKI-yWZ4k,5203
 tomwer/tests/test_utils.py,sha256=D0rNDSK6csEOYBY_7gD-4A3jp8rYAm8L1_Xg34A9I2s,305
 tomwer/tests/utils.py,sha256=RAXx5A99WD4Vyuv_wjHBdr-Xu7UiThHRKw2eiB5GX10,107
-tomwer-1.3.0a0.dist-info/LICENSE,sha256=yR_hIZ1MfDh9x2_s23uFqBH7m5DgrBl9nJKkE37YChM,1877
-tomwer-1.3.0a0.dist-info/METADATA,sha256=1Na7bIGZygO0tv6moSQSg_3Q_uTNkq6zfuANHOOtODc,10517
-tomwer-1.3.0a0.dist-info/WHEEL,sha256=pkctZYzUS4AYVn6dJ-7367OJZivF2e8RA9b_ZBjif18,92
-tomwer-1.3.0a0.dist-info/entry_points.txt,sha256=fIcDnCxjgwzfIylLYhUsFyiNZjZMxsfRQBxi4f-cJg8,440
-tomwer-1.3.0a0.dist-info/namespace_packages.txt,sha256=Iut-JTfT11SZHHm77_ZeszD7pZDWXcTweCbvrJpqDyQ,14
-tomwer-1.3.0a0.dist-info/top_level.txt,sha256=Yz5zKh0FPiImtzHYcPuztG1AO8-6KEpUWgoChGbA0Ys,21
-tomwer-1.3.0a0.dist-info/RECORD,,
+tomwer-1.3.0.dev2.dist-info/LICENSE,sha256=yR_hIZ1MfDh9x2_s23uFqBH7m5DgrBl9nJKkE37YChM,1877
+tomwer-1.3.0.dev2.dist-info/METADATA,sha256=jqexQBnHcKnjK_IkQBHoL8bApokqEryS5aW9p7ULpNs,11429
+tomwer-1.3.0.dev2.dist-info/WHEEL,sha256=pkctZYzUS4AYVn6dJ-7367OJZivF2e8RA9b_ZBjif18,92
+tomwer-1.3.0.dev2.dist-info/entry_points.txt,sha256=fIcDnCxjgwzfIylLYhUsFyiNZjZMxsfRQBxi4f-cJg8,440
+tomwer-1.3.0.dev2.dist-info/namespace_packages.txt,sha256=Iut-JTfT11SZHHm77_ZeszD7pZDWXcTweCbvrJpqDyQ,14
+tomwer-1.3.0.dev2.dist-info/top_level.txt,sha256=Yz5zKh0FPiImtzHYcPuztG1AO8-6KEpUWgoChGbA0Ys,21
+tomwer-1.3.0.dev2.dist-info/RECORD,,