toil 9.1.1__py3-none-any.whl → 9.2.0__py3-none-any.whl

{toil-9.1.1.dist-info → toil-9.2.0.dist-info}/RECORD

@@ -1,135 +1,135 @@
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@@ -186,16 +188,12 @@ toil/test/cwl/scatter_duplicate_outputs.cwl,sha256=1ubeij5YQhjHe0igq5xL-Caje6ghe
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@@ -264,53 +262,52 @@ toil/test/mesos/stress.py,sha256=0_-l6SvPc0qgwF0bsJgMm1-cmKx-LZ1-_4XlfghPU7s,212
 toil/test/options/__init__.py,sha256=9h1rcqYjjnn97DpDEJf8tlNOIDx0XiXyQwh0F_81y0k,612
 toil/test/options/options.py,sha256=xpp0PZKilYeXwkXUBszRZSC_LziX_rPi9shsQlemuuo,1474
 toil/test/provisioners/__init__.py,sha256=9h1rcqYjjnn97DpDEJf8tlNOIDx0XiXyQwh0F_81y0k,612
-toil/test/provisioners/clusterScalerTest.py,sha256=-Q5epOMHynfnlNZfpVXMU48puw_G9fyLiW8Gl8Qrk5o,44463
-toil/test/provisioners/clusterTest.py,sha256=CpTEXear3WnsjszU__pvkOm19o5X27BzKyFA2TaVycc,10180
+toil/test/provisioners/clusterScalerTest.py,sha256=7NbcCmUu_W5eH0VRfkNk9dJKmKtq8CyLuR1zd9nE-_A,44415
+toil/test/provisioners/clusterTest.py,sha256=Rck3dAp81UIALQHx_POADbWVbcHj29XVzOh7yRtr5g8,10148
 toil/test/provisioners/gceProvisionerTest.py,sha256=eL3G66PzMqjB2ahXMTUd6rBGByJgtblp5_uItSyRHv4,13619
 toil/test/provisioners/provisionerTest.py,sha256=_JAvTs9bjynVpRkJI0VLPHZw-Y7kHI9B1vaWR4RomKA,2179
 toil/test/provisioners/restartScript.py,sha256=GodLqsIiYNxXFWQtyYHrxACI1fSUeGzcltO6qOdznj4,416
 toil/test/provisioners/aws/__init__.py,sha256=9h1rcqYjjnn97DpDEJf8tlNOIDx0XiXyQwh0F_81y0k,612
-toil/test/provisioners/aws/awsProvisionerTest.py,sha256=JHkXHVez95-KQBSAwJwbfxy-j5_WYYD_9uesyw9WSgY,25266
+toil/test/provisioners/aws/awsProvisionerTest.py,sha256=loAkP55XJatv5ZDnIxoVDjVjARndOPjByK2-94NHiAI,25251
 toil/test/server/__init__.py,sha256=9h1rcqYjjnn97DpDEJf8tlNOIDx0XiXyQwh0F_81y0k,612
-toil/test/server/serverTest.py,sha256=2T9FD32-9uoGjtRC2mtJh67j9_3OWZgFONQmkA4f2tU,29399
+toil/test/server/serverTest.py,sha256=GbR6wG9EQe8TlHa5vL4G0ALpDLsoykTYOFgqkKqAyww,29397
 toil/test/sort/__init__.py,sha256=9h1rcqYjjnn97DpDEJf8tlNOIDx0XiXyQwh0F_81y0k,612
-toil/test/sort/restart_sort.py,sha256=A-1pWMhSIHSbtib-u1rvOFbhRqW_mQlf6dEbelFs7Q0,11358
-toil/test/sort/sort.py,sha256=H_f4DzLGSnkHpFRayYtJKkxlCAVcikuVR48MnuybrDI,11258
+toil/test/sort/restart_sort.py,sha256=d_aR1Z9M8yvGkkAS7WhI3eTfP-vpYufokKS__Ka4Q6g,11302
+toil/test/sort/sort.py,sha256=-wdiJkdRryNmCIKcLcXMVDW-5upLhgvZbHYR5dtaYHU,11201
 toil/test/sort/sortTest.py,sha256=0dUZ0RCzE66bRcmOHJUD5MFg4UkSRbwhnHVkzX54wI4,12239
 toil/test/src/__init__.py,sha256=9h1rcqYjjnn97DpDEJf8tlNOIDx0XiXyQwh0F_81y0k,612
 toil/test/src/autoDeploymentTest.py,sha256=GSflx0XQ_gQQ8tHVouR0GJ_1oDyVYdS8gaK9tpIV9Rg,23898
 toil/test/src/busTest.py,sha256=N49fTwZFT7kTt5a-9xxoxJTjoMnjvIPwyJdmX9N7nac,5353
 toil/test/src/checkpointTest.py,sha256=LahYir7B3FNttP4OhbiYFKjxIftjTiuIXHC83xsxzNI,4464
-toil/test/src/deferredFunctionTest.py,sha256=y8AAnmmn7VYbJozukKQFE3mx-vw9O6o6oeCiGv4PkeA,13355
+toil/test/src/deferredFunctionTest.py,sha256=n3K93MXKummufHSE_vjrQrgsCzJaV2T005D3BPuWgkM,13319
 toil/test/src/dockerCheckTest.py,sha256=CuXBewb1ba4rOO3YOrmChxPvdOfJGXNcT8P47HcaY1g,4407
-toil/test/src/environmentTest.py,sha256=k-WsZ3-9Xn0Vctd8tBQTPR_fVqY-f1VHC5U3_d7qdd4,4239
-toil/test/src/fileStoreTest.py,sha256=AZ9OazR5zRhUnH4eYYGiGsr8ZFcpX50ng3WGT00w0OQ,72970
+toil/test/src/environmentTest.py,sha256=jYjJfj4tmV08muv5VqEQ07d_dLdT1-ia90lEnEVT4Ho,4208
+toil/test/src/fileStoreTest.py,sha256=Pj4TUmlAwcyrtkXiaMwC4PC6QStG7wDIEYSCkEhAQXU,72942
 toil/test/src/helloWorldTest.py,sha256=vPxXEYDZZuMynm_yQ5ZZPcm3AzXdYLT9bs0kP72OM2w,1727
-toil/test/src/importExportFileTest.py,sha256=jqQQzQta0BH6QtxidFs8s-snpLIAS6P5y89oAU_gXAA,7974
+toil/test/src/importExportFileTest.py,sha256=3o8S0KXE09FNmjzGnHAD5P-z1vrxrcM196c2qqnzyiU,7944
 toil/test/src/jobDescriptionTest.py,sha256=ops9NpnUa1aKGPrTOXU3jTwiDszCRJzHHAZzQx8bF10,4335
 toil/test/src/jobEncapsulationTest.py,sha256=j4lrjF_Zcoudp9t4fNGxS-_vnChc1rmH88oIivXloR0,2386
 toil/test/src/jobFileStoreTest.py,sha256=88slShZfPJgVrEP6pTwuVxPJ-cROwMzdIdgPlogdg18,8977
-toil/test/src/jobServiceTest.py,sha256=2MgEKL2MJAYq6cM8z_bmFq2rbW0TCJEq3at8B8kfcvE,18222
-toil/test/src/jobTest.py,sha256=xksXuF9zjwVgwO1u6szUPx24o29bGMGLmptGBwsj5X0,28624
-toil/test/src/miscTests.py,sha256=uSDEJxU7EqG8wEYQ5Xqz7fsrvOe5l3oxzWpWOAtBYdA,8190
-toil/test/src/promisedRequirementTest.py,sha256=VMBciYMqJyukqCSshp1aoexBrL6XtH9JHVwh1nM8BvE,9271
+toil/test/src/jobServiceTest.py,sha256=B25lvltqK9gW6K55v89tAmt-xHCTS4OBbsfAFr0pGu0,18370
+toil/test/src/jobTest.py,sha256=1KiV_-8vyQzBX4VNOX7yl2ApHVG4G-zJe0JKCm3tVqc,32772
+toil/test/src/miscTests.py,sha256=dRc0BaeTupBqCXpcKNOu5GH96CGzLACitKPY4sG2uZM,8125
+toil/test/src/promisedRequirementTest.py,sha256=FK9rzSpa00OeAuKtdqXssvVOTvCA9X9Rn4YJ3oS7b4E,9292
 toil/test/src/promisesTest.py,sha256=HpFIDWWkEjdEA-vIAyX_Rn9oYwFOHMvSDSlOkihy-PE,2318
 toil/test/src/realtimeLoggerTest.py,sha256=bvr7YDS_co48fmdKo-c0bBXn2fnzvUAFRMODNyTkvfQ,2443
-toil/test/src/regularLogTest.py,sha256=ID01aA1yjocK3NEVYo7w7DXCPRIdjZ7Wh20_10u_E8E,4378
-toil/test/src/resourceTest.py,sha256=rVxIj8bNm0DLX2AkThOtz4dFrvlmWeX7Rtk_qyr2Etw,11241
-toil/test/src/restartDAGTest.py,sha256=Ys6p8ZGw24OTKnKy70yLidz2XIXsDRi3YCdiQyJSOSs,6160
-toil/test/src/resumabilityTest.py,sha256=PYculJnr74ywIMJjW_5Gy4BlbgLja2hHyMcWifreaWQ,4367
-toil/test/src/retainTempDirTest.py,sha256=2vyNpYzRG7A01l5kwaU7q0On7jcJxV9xrSbQ9x8cVdU,4944
-toil/test/src/systemTest.py,sha256=QXnQYsJ7r3MrLgzv_lwVYJP4LJsMno6RZ9CW4Dk0N2E,2320
-toil/test/src/threadingTest.py,sha256=WxAAr6-5VfuBGAkdw1JEcGghxA-M-u3MtycH1jojEEE,5194
+toil/test/src/regularLogTest.py,sha256=37wQ4jCGuX7_3sVe6SiLQzRGF4LrwhkF8PSZ67C21Ec,4347
+toil/test/src/resourceTest.py,sha256=s2P_fp_11DmlRj4f9hfaRdfDhbF-uJMiUBVjmiu3IjM,11156
+toil/test/src/restartDAGTest.py,sha256=9njsD3Qov8s0TkHs0g3EpO36CuYwDB3cUxukxbgIArY,6126
+toil/test/src/resumabilityTest.py,sha256=Vc_JXLX0HlpVGzrigtja70emUkc1mRd8KUnxRG3jKM0,4367
+toil/test/src/retainTempDirTest.py,sha256=_DRipIomDlEGV09lPcYrb-KWgqix52rQsp2Jom9od3Y,4944
+toil/test/src/systemTest.py,sha256=l_h9-EyIWbxhuHecfp4r6DDGvjkE7SgQQYYpgUuJdZg,2307
+toil/test/src/threadingTest.py,sha256=aHe347XpXnPWzY57kX5cYbY1yHD3xpNG0tT4eKOTqqw,5194
 toil/test/src/toilContextManagerTest.py,sha256=vM8AgCCghzI5GVginyyhaZZFGZF6xF42-NXl2S0quhY,3114
 toil/test/src/userDefinedJobArgTypeTest.py,sha256=5PaS_418DbCAk7csGmgx3VC90mB-9Y1X116b9LSLs1w,2869
-toil/test/src/workerTest.py,sha256=88Mz9ES62IijTkLdnzCxB3ZVEtLS2fxbIVlfhjI4SwI,6334
+toil/test/src/workerTest.py,sha256=5fLJZCUk6rrHybhtsqMCJi7AOkRxQGu9LKGwbPuJP7o,6303
 toil/test/utils/__init__.py,sha256=9h1rcqYjjnn97DpDEJf8tlNOIDx0XiXyQwh0F_81y0k,612
-toil/test/utils/toilDebugTest.py,sha256=Qp3_MaTyhjQOs4WkI2J7BwRSdx-MyjjcghTnPZ-EWKA,9757
-toil/test/utils/toilKillTest.py,sha256=iFApgCjKKgmeuq1FSCn04-9VJijOjmBCn-RdjlqSuKw,4136
-toil/test/utils/utilsTest.py,sha256=RuiYS5ogRz_rid2YqsRGhylpW3oGofe8ssGvUbXSBiE,22008
-toil/test/utils/ABCWorkflowDebug/ABC.txt,sha256=tdQEXD9Gb6kf4sxqvnkjKhpXzfEE96JucW4KHieJ33g,3
+toil/test/utils/toilDebugTest.py,sha256=vUkMh5lrnQFHrnv7TVEu6QIMxDMjZGJMUtN3mb-vu5Q,9799
+toil/test/utils/toilKillTest.py,sha256=KuiyDIoUsymyV_hI16xrzdT6ck0FHfb1NsHZQQ1aPY4,4136
+toil/test/utils/utilsTest.py,sha256=Iew1H2zUoXAiwHdyUqfN5PfT5kiorO-lA6MddLs8V4U,22117
 toil/test/utils/ABCWorkflowDebug/B_file.txt,sha256=wM3nf6j--X1HbBCq09LVT8wvM2FA0HNlHC3Mzx43n9Y,2
 toil/test/utils/ABCWorkflowDebug/debugWorkflow.py,sha256=QF8tfoEVYdZbR7vyL43El4G_Q613zdGo_xF_m_zi7sk,6785
 toil/test/utils/ABCWorkflowDebug/mkFile.py,sha256=x0DSfKGpd-39F1X1lXHzY_CpGvFvsMFDneOJRRimDXE,454
@@ -320,8 +317,8 @@ toil/test/wdl/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 toil/test/wdl/lint_error.wdl,sha256=vLwgk8CrPzLNRJnMLuQV22m1E1cwG-m76ZM0XgSKfLY,86
 toil/test/wdl/test.csv,sha256=1hPDzKegqv1H582Bx-4CaFBLE-jCSyZo3N6KhjhsXO8,18
 toil/test/wdl/test.tsv,sha256=O4F7lQouDB33aMklmbL2KOoLNNEDx_EUiHmANZ4pKeg,18
-toil/test/wdl/wdltoil_test.py,sha256=GajkwQqFCcbUYqALEpW2KIUYhVvgnCcQH_qXwfHAzh4,51302
-toil/test/wdl/wdltoil_test_kubernetes.py,sha256=vJdmSuQJslvrfF6nadjORkdanED99xElG54EC7L2rR4,2996
+toil/test/wdl/wdltoil_test.py,sha256=fqqJD2K1zoJMdUkgetAKFtV9qSDrfMQ-bZrTcFpcnGM,57615
+toil/test/wdl/wdltoil_test_kubernetes.py,sha256=AEyWxMNtmS9-TBMwyCumHYQQ0DLHQp6T8StpRSxsnR8,2996
 toil/test/wdl/md5sum/empty_file.json,sha256=Y4Yb2dygeV8J7wowyUuTi8qOwmRR-znb70r3jsPw688,27
 toil/test/wdl/md5sum/md5sum-gs.json,sha256=PppK5H77nRcpo_n2ttZzEPkoxrLVypGlFD6Wrwe-hfk,123
 toil/test/wdl/md5sum/md5sum.1.0.wdl,sha256=BJMdlruHIRcuBLQY738T_eyHZms-8obz4-P6VxrwW30,445
@@ -429,24 +426,24 @@ toil/test/wdl/wdl_specification/v1_spec_declaration.wdl,sha256=-9YcGU3YotQP3vn4-
 toil/utils/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 toil/utils/toilClean.py,sha256=X6Fws6LVqa-ScUITMTomV5iohXa3yz_rAIFnUfXlqZU,1850
 toil/utils/toilConfig.py,sha256=Ki6gGV-9d21z06u-A0meE2H0MjJUCT4mQEsMmERHn8o,1502
-toil/utils/toilDebugFile.py,sha256=tRlsJgfCnPCV-1w4eS9WPIBDlywIxLgxzAXeQjjqhhk,6334
-toil/utils/toilDebugJob.py,sha256=K3j5wqDBzLHRGwThE_PDVN0-yKFl7xETDWXrNe6EnQc,10796
+toil/utils/toilDebugFile.py,sha256=t-WVOca8Imluf_xf6FA5TTE2NXWEkbjXCSkJorBAb2s,6260
+toil/utils/toilDebugJob.py,sha256=AtCTmkZyh9Rayvo0lH9BcOUEL9xyMrCe5q-NOP-eei0,10765
 toil/utils/toilDestroyCluster.py,sha256=OvwlKgomHiLptN8GjLouBzfFCo-SyLfrRWF4sv0kPww,1416
 toil/utils/toilKill.py,sha256=21zOstvFb32cwQlhMsG5Q4lPT2CSnZ7OXEK1mmyLmtk,2751
-toil/utils/toilLaunchCluster.py,sha256=nKoqmbAnadoZNKx7plzyZzAgMj6yn38tu2LOQqjLNUU,12931
+toil/utils/toilLaunchCluster.py,sha256=bFwgJ40tY0vKjUvqAC8_QxSPJXz80DpUr3FgzN1DRMU,12900
 toil/utils/toilMain.py,sha256=Lz7dtkpE8urTRgimRjewKvbh4Xgh6l0OJRtxX203LyI,2790
 toil/utils/toilRsyncCluster.py,sha256=cR-4o9KpoyBdObCwQgpAqpO30VK3gGzwHKOGyQHGQeQ,2150
 toil/utils/toilServer.py,sha256=4XbyOHQHgMWWrCWj9Uz1M-jLQheV2Ju-DQ_fNdnBg1o,1178
-toil/utils/toilSshCluster.py,sha256=yjNOjbtC1CdvTRK1vOygamXvlUYHnbmWtsOyH5lBNkg,3580
-toil/utils/toilStats.py,sha256=k6llhv5HOolSO4yQCoMuYVwbOpauGrPiGb5jSAWYAtM,26301
-toil/utils/toilStatus.py,sha256=qacxW5lcguvmhUi1b4cjm1acJik0zpsP7CsUuZyX-fo,20424
+toil/utils/toilSshCluster.py,sha256=VrMprvZf2AfTvWAoa0v_t_81T1Q6Nf1cdzEjJV-r-UE,3582
+toil/utils/toilStats.py,sha256=P2OEdDcsTjZzVqgD_Wq4-OgBQDNIBBeI3p6Br0_Ktws,26124
+toil/utils/toilStatus.py,sha256=Mxpbd5vx0Ff-LvRmd0SHD2tCIH9ZJiuUQksUGT0P9T4,20361
 toil/utils/toilUpdateEC2Instances.py,sha256=47972f1_oRvKOZv77EcBr3QjP2YNl8SZWhTsw6mWG-4,1318
 toil/wdl/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 toil/wdl/utils.py,sha256=U0TqbVTsap0VdeZjrUf4l71A7Zns-Hkso1B1Zdp2LRk,1316
-toil/wdl/wdltoil.py,sha256=DKGkqbGjjEaXt9QrnSKDzEE3JuAMNzE_jc9cxyibk7c,265992
-toil-9.1.1.dist-info/licenses/LICENSE,sha256=YVxVi652J1ZDmtC3EMP5r0EbK85-hm_pzogiULmlqUA,12862
-toil-9.1.1.dist-info/METADATA,sha256=__E7Qc3gMoOZf0U8AWTtBXtarqwFA8e-zpegiV35-Do,8695
-toil-9.1.1.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
-toil-9.1.1.dist-info/entry_points.txt,sha256=EF2yFhV2UYuJGr-OjMkUOd3RyOCgRWQbS6XJtBJ25eM,436
-toil-9.1.1.dist-info/top_level.txt,sha256=1ydj7IXvHS9tMT5OVTSSpub6ZOaQeIn3KGCgJqaikF0,5
-toil-9.1.1.dist-info/RECORD,,
+toil/wdl/wdltoil.py,sha256=DDqDwcKYhcs7f5w0fUc5Nqnp0WZBl_nuhY-nrXs6_Hk,267274
+toil-9.2.0.dist-info/licenses/LICENSE,sha256=YVxVi652J1ZDmtC3EMP5r0EbK85-hm_pzogiULmlqUA,12862
+toil-9.2.0.dist-info/METADATA,sha256=Dbp0s2tHZNz3aTDgW5p6puSxLgQU-XKYzF1FB1qVe2o,8473
+toil-9.2.0.dist-info/WHEEL,sha256=wUyA8OaulRlbfwMtmQsvNngGrxQHAvkKcvRmdizlJi0,92
+toil-9.2.0.dist-info/entry_points.txt,sha256=EF2yFhV2UYuJGr-OjMkUOd3RyOCgRWQbS6XJtBJ25eM,436
+toil-9.2.0.dist-info/top_level.txt,sha256=1ydj7IXvHS9tMT5OVTSSpub6ZOaQeIn3KGCgJqaikF0,5
+toil-9.2.0.dist-info/RECORD,,

{toil-9.1.1.dist-info → toil-9.2.0.dist-info}/WHEEL

@@ -1,5 +1,5 @@
 Wheel-Version: 1.0
-Generator: setuptools (80.9.0)
+Generator: setuptools (80.10.2)
 Root-Is-Purelib: true
 Tag: py3-none-any
 

toil/test/cwl/staging_cat.cwl

@@ -1,27 +0,0 @@
-#!/usr/bin/env cwl-runner
-
-cwlVersion: v1.0
-class: CommandLineTool
-baseCommand: [ "bash", "run.sh" ]
-
-requirements:
-  DockerRequirement: # <- this is the part that causes the error
-    dockerPull: ubuntu:latest
-  InitialWorkDirRequirement:
-    listing:
-      - entryname: some_dir # <- put all the input files into a dir
-        writable: true
-        entry: "$({class: 'Directory', listing: inputs.input_files})"
-      - entryname: run.sh
-        entry: |-
-          for i in \$(find some_dir -type f); do cat \$i ; done
-
-stdout: output.txt
-
-inputs:
-  input_files:
-    type: File[]
-
-outputs:
-  output_file:
-    type: stdout

toil/test/cwl/staging_make_file.cwl

@@ -1,25 +0,0 @@
-#!/usr/bin/env cwl-runner
-
-cwlVersion: v1.0
-class: CommandLineTool
-baseCommand: [ "bash", "run.sh" ]
-
-stdout: output.txt
-
-requirements:
-  InitialWorkDirRequirement:
-    listing:
-      - entryname: run.sh
-        entry: |-
-          echo "$1"
-
-inputs:
-  sampleId:
-    type: string
-    inputBinding:
-      position: 1
-
-outputs:
-  output_file:
-    type: stdout
-

toil/test/cwl/staging_workflow.cwl

@@ -1,43 +0,0 @@
-#!/usr/bin/env cwl-runner
-
-cwlVersion: v1.0
-class: Workflow
-requirements:
-  MultipleInputFeatureRequirement: {}
-  ScatterFeatureRequirement: {}
-  StepInputExpressionRequirement: {}
-  InlineJavascriptRequirement: {}
-  SubworkflowFeatureRequirement: {}
-
-inputs:
-  samples:
-    type:
-      type: array
-      items:
-        type: record
-        fields:
-          sampleId: string
-
-steps:
-  make_file:
-    run: staging_make_file.cwl
-    scatter: sample
-    in:
-      sample: samples
-      sampleId:
-        valueFrom: ${ return inputs.sample['sampleId']; }
-    out:
-      [ output_file ]
-
-  gather_files:
-    run: staging_cat.cwl
-    in:
-      input_files: make_file/output_file
-    out:
-      [ output_file ]
-
-outputs:
-  output_file:
-    type: File
-    outputSource: gather_files/output_file
-

toil/test/cwl/zero_default.cwl

@@ -1,61 +0,0 @@
-#!/usr/bin/env cwl-runner
-cwlVersion: v1.2
-class: Workflow
-requirements:
-  MultipleInputFeatureRequirement: {}
-  InlineJavascriptRequirement: {}
-inputs:
-  valueA:
-    type: int?
-    default: 0
-  valueB:
-    type: int?
-  someFile:
-    type: File?
-steps:
-  prev_step:
-    run:
-      class: ExpressionTool
-      requirements:
-        InlineJavascriptRequirement: {}
-      inputs:
-        someFile:
-          type: File
-      outputs:
-        valueA:
-          type: int
-      expression: |
-        ${
-          return {valueA: 1};
-        }
-    in:
-      someFile: someFile
-    out: [valueA]
-    when: $(inputs.someFile != null)
-    
-  main_step:
-    run:
-      class: ExpressionTool
-      requirements:
-        InlineJavascriptRequirement: {}
-      inputs:
-        valueA:
-          type: int
-      outputs:
-        valueA:
-          type: int
-      expression: |
-        ${
-          return {valueA: inputs.valueA};
-        }
-    in:
-      valueA:
-        source: [prev_step/valueA, valueA]
-        pickValue: first_non_null
-    out: [valueA]
-outputs:
-  valueA:
-    type: int
-    outputSource: main_step/valueA
-
-

toil/test/utils/ABCWorkflowDebug/ABC.txt

@@ -1 +0,0 @@
-ABC