taxoniumtools 2.1.18__py3-none-any.whl → 2.1.20__py3-none-any.whl

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Files changed (7) hide show
  1. taxoniumtools/_version.py +3 -3
  2. taxoniumtools/ushertools.py +2 -2
  3. {taxoniumtools-2.1.18.dist-info → taxoniumtools-2.1.20.dist-info}/METADATA +1 -1
  4. {taxoniumtools-2.1.18.dist-info → taxoniumtools-2.1.20.dist-info}/RECORD +7 -7
  5. {taxoniumtools-2.1.18.dist-info → taxoniumtools-2.1.20.dist-info}/WHEEL +0 -0
  6. {taxoniumtools-2.1.18.dist-info → taxoniumtools-2.1.20.dist-info}/entry_points.txt +0 -0
  7. {taxoniumtools-2.1.18.dist-info → taxoniumtools-2.1.20.dist-info}/top_level.txt +0 -0
taxoniumtools/_version.py CHANGED
@@ -28,7 +28,7 @@ version_tuple: VERSION_TUPLE
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  commit_id: COMMIT_ID
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  __commit_id__: COMMIT_ID
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- __version__ = version = '2.1.18'
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- __version_tuple__ = version_tuple = (2, 1, 18)
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+ __version__ = version = '2.1.20'
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+ __version_tuple__ = version_tuple = (2, 1, 20)
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- __commit_id__ = commit_id = 'g78a285409'
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+ __commit_id__ = commit_id = 'ged689f423'
taxoniumtools/ushertools.py CHANGED
@@ -138,8 +138,8 @@ def get_mutations(past_nuc_muts_dict,
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  initial_codon = complement(initial_codon)
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  final_codon = complement(final_codon)
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- initial_codon_trans = codon_table[initial_codon]
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- final_codon_trans = codon_table[final_codon]
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+ initial_codon_trans = codon_table.get(initial_codon, 'X')
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+ final_codon_trans = codon_table.get(final_codon, 'X')
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  if initial_codon_trans != final_codon_trans or disable_check_for_differences:
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  #(gene, codon_number + 1, initial_codon_trans, final_codon_trans)
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{taxoniumtools-2.1.18.dist-info → taxoniumtools-2.1.20.dist-info}/METADATA RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: taxoniumtools
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- Version: 2.1.18
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+ Version: 2.1.20
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  Summary: Generate files for taxonium
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  Home-page: https://github.com/theosanderson/taxonium
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  Author: Theo Sanderson
{taxoniumtools-2.1.18.dist-info → taxoniumtools-2.1.20.dist-info}/RECORD RENAMED
@@ -1,14 +1,14 @@
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  taxoniumtools/__init__.py,sha256=iizd2XLvtBHVDz6j82ZWJ2eojVvbTmtJCWQGk5MtqhE,51
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  taxoniumtools/__main__.py,sha256=0-mrc1_4NaJur-6SQXV6vGrJFFDuRRFvqeQvnlOA5l4,25
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- taxoniumtools/_version.py,sha256=WdeOPE3nJzQSqLw94mFWBUAjC5E2VgKushcIZ_4xRyc,714
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+ taxoniumtools/_version.py,sha256=kc0e6ls67VTZB9cfui7raKfqp9PdszH6Y1WpWDuXaEA,714
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  taxoniumtools/newick_to_taxonium.py,sha256=05JMQgmYLEo4nZVGPB0afAlF2s93WE7Ka_jwd0kCw0A,6207
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  taxoniumtools/parsimony_pb2.py,sha256=hE6jWYlgTpUbTS1uTjRKwVgPNO232QIu3LqjpJUlthU,15575
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  taxoniumtools/usher_to_taxonium.py,sha256=fir7_p18f8CaFGX7H1tRTm5YSryMhmcuA_PlL3sY2m4,12295
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- taxoniumtools/ushertools.py,sha256=duMipZuWfEtfOx-NosZe-6XSIL5YdKHGWKJbM9jM-sQ,16417
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+ taxoniumtools/ushertools.py,sha256=zF_V0ySNgI5Wx-cjXbwigFRH0hIz6_s2LVLBk2UT06o,16435
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  taxoniumtools/utils.py,sha256=sNbadwK7CNLK-sQFf31Au8nG1rUmcrbGMKDSV7UJMJo,10477
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  taxoniumtools/view_taxonium.py,sha256=LYWBhaXYrmOOrIHI2bBYhqNUw-HZRtYzdvMQb6ZombI,4640
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- taxoniumtools-2.1.18.dist-info/METADATA,sha256=47xoCHFFd3vj_hynHBnHqBThKJiJKgr_GnoCWpEuXCw,2168
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- taxoniumtools-2.1.18.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
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- taxoniumtools-2.1.18.dist-info/entry_points.txt,sha256=oIcDnAw81KjfG32-ePuBFvqS_wbLXWB8NmWo61o1LW0,183
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- taxoniumtools-2.1.18.dist-info/top_level.txt,sha256=EEWGvODb1nR_CiPHUDxcfU4UzxtPnVN4yTywlT3Z0nE,14
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- taxoniumtools-2.1.18.dist-info/RECORD,,
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+ taxoniumtools-2.1.20.dist-info/METADATA,sha256=Dz9ByNiFR6SHSm9a5VhBkTbq7FRLcHTePQrYaxOiOYI,2168
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+ taxoniumtools-2.1.20.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
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+ taxoniumtools-2.1.20.dist-info/entry_points.txt,sha256=oIcDnAw81KjfG32-ePuBFvqS_wbLXWB8NmWo61o1LW0,183
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+ taxoniumtools-2.1.20.dist-info/top_level.txt,sha256=EEWGvODb1nR_CiPHUDxcfU4UzxtPnVN4yTywlT3Z0nE,14
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+ taxoniumtools-2.1.20.dist-info/RECORD,,