swcgeom 0.21.0__cp313-cp313-win_amd64.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (72) hide show
  1. swcgeom/__init__.py +21 -0
  2. swcgeom/analysis/__init__.py +13 -0
  3. swcgeom/analysis/feature_extractor.py +454 -0
  4. swcgeom/analysis/features.py +218 -0
  5. swcgeom/analysis/lmeasure.py +750 -0
  6. swcgeom/analysis/sholl.py +201 -0
  7. swcgeom/analysis/trunk.py +183 -0
  8. swcgeom/analysis/visualization.py +191 -0
  9. swcgeom/analysis/visualization3d.py +81 -0
  10. swcgeom/analysis/volume.py +143 -0
  11. swcgeom/core/__init__.py +19 -0
  12. swcgeom/core/branch.py +129 -0
  13. swcgeom/core/branch_tree.py +65 -0
  14. swcgeom/core/compartment.py +107 -0
  15. swcgeom/core/node.py +130 -0
  16. swcgeom/core/path.py +155 -0
  17. swcgeom/core/population.py +398 -0
  18. swcgeom/core/swc.py +247 -0
  19. swcgeom/core/swc_utils/__init__.py +19 -0
  20. swcgeom/core/swc_utils/assembler.py +35 -0
  21. swcgeom/core/swc_utils/base.py +180 -0
  22. swcgeom/core/swc_utils/checker.py +112 -0
  23. swcgeom/core/swc_utils/io.py +335 -0
  24. swcgeom/core/swc_utils/normalizer.py +163 -0
  25. swcgeom/core/swc_utils/subtree.py +70 -0
  26. swcgeom/core/tree.py +387 -0
  27. swcgeom/core/tree_utils.py +277 -0
  28. swcgeom/core/tree_utils_impl.py +58 -0
  29. swcgeom/images/__init__.py +9 -0
  30. swcgeom/images/augmentation.py +149 -0
  31. swcgeom/images/contrast.py +87 -0
  32. swcgeom/images/folder.py +217 -0
  33. swcgeom/images/io.py +604 -0
  34. swcgeom/images/loaders/__init__.py +8 -0
  35. swcgeom/images/loaders/pbd.c +38785 -0
  36. swcgeom/images/loaders/pbd.cp313-win_amd64.pyd +0 -0
  37. swcgeom/images/loaders/raw.c +17408 -0
  38. swcgeom/images/loaders/raw.cp313-win_amd64.pyd +0 -0
  39. swcgeom/transforms/__init__.py +20 -0
  40. swcgeom/transforms/base.py +136 -0
  41. swcgeom/transforms/branch.py +223 -0
  42. swcgeom/transforms/branch_tree.py +74 -0
  43. swcgeom/transforms/geometry.py +270 -0
  44. swcgeom/transforms/image_preprocess.py +107 -0
  45. swcgeom/transforms/image_stack.py +219 -0
  46. swcgeom/transforms/images.py +206 -0
  47. swcgeom/transforms/mst.py +183 -0
  48. swcgeom/transforms/neurolucida_asc.py +498 -0
  49. swcgeom/transforms/path.py +56 -0
  50. swcgeom/transforms/population.py +36 -0
  51. swcgeom/transforms/tree.py +298 -0
  52. swcgeom/transforms/tree_assembler.py +160 -0
  53. swcgeom/utils/__init__.py +18 -0
  54. swcgeom/utils/debug.py +23 -0
  55. swcgeom/utils/download.py +119 -0
  56. swcgeom/utils/dsu.py +58 -0
  57. swcgeom/utils/ellipse.py +131 -0
  58. swcgeom/utils/file.py +90 -0
  59. swcgeom/utils/neuromorpho.py +581 -0
  60. swcgeom/utils/numpy_helper.py +70 -0
  61. swcgeom/utils/plotter_2d.py +134 -0
  62. swcgeom/utils/plotter_3d.py +35 -0
  63. swcgeom/utils/renderer.py +145 -0
  64. swcgeom/utils/sdf.py +324 -0
  65. swcgeom/utils/solid_geometry.py +154 -0
  66. swcgeom/utils/transforms.py +367 -0
  67. swcgeom/utils/volumetric_object.py +483 -0
  68. swcgeom-0.21.0.dist-info/METADATA +86 -0
  69. swcgeom-0.21.0.dist-info/RECORD +72 -0
  70. swcgeom-0.21.0.dist-info/WHEEL +5 -0
  71. swcgeom-0.21.0.dist-info/licenses/LICENSE +201 -0
  72. swcgeom-0.21.0.dist-info/top_level.txt +1 -0