spectre-core 0.0.10__py3-none-any.whl → 0.0.12__py3-none-any.whl

spectre_core-0.0.12.dist-info/RECORD

@@ -0,0 +1,64 @@
+spectre_core/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
+spectre_core/exceptions.py,sha256=XYRvBwhL7UQ_VOk6eaC7xRYWxcB-BdMXY5ar9dev00c,566
+spectre_core/_file_io/__init__.py,sha256=YlkTZsmzuvxYW4kbmzaOv4WcqhbyoV00D-V4mJyNfBQ,334
+spectre_core/_file_io/file_handlers.py,sha256=gPI9YVhqyJH22m2Rma6yOrY6-eqqMEttAbwWVtRDP9U,3404
+spectre_core/batches/__init__.py,sha256=2F187_EZ7rG36_mcVRzcZB74DRS_6lS_VMlZoT0WTKo,633
+spectre_core/batches/_base.py,sha256=YZ9l7wRJzEQPnckq9SYQ-a4KK0TO7VIFzk_F0P1bdjw,4893
+spectre_core/batches/_batches.py,sha256=6HT1CZ5TS8xxIiZyMUFcpa5I6Q_PbyDzETg5vz-eaMQ,7034
+spectre_core/batches/_factory.py,sha256=oiUaqJ0wkUDG1l3HxAz0GayKuAPY71BSG1t2Nm_KEC0,1056
+spectre_core/batches/_register.py,sha256=_T_e9QPgVkY0PtybwwWjYHkL1ovcB1w8MMKyZiv4q_0,435
+spectre_core/batches/library/_callisto.py,sha256=nOLHjC-8xPUXst3ZwxqI6TlqB-w-EmKIrg1gb2KZgB8,3731
+spectre_core/batches/library/_fixed_center_frequency.py,sha256=tMILhZPBBj_erF_XOBSXwf8g8_SmIcBD5sx1aNv7fvc,4770
+spectre_core/batches/library/_swept_center_frequency.py,sha256=s_6OO7y_UC5_UVAxwgCrMQxs3c3rijBU-qqxkACXuZ4,4724
+spectre_core/capture_configs/__init__.py,sha256=-OFfB1UMuKnfjq6UDYdEA8ihu5uObzv8FqxVMRUYpCU,973
+spectre_core/capture_configs/_capture_config.py,sha256=An0B4sQ3OQPTIZrDwOY6mqLTQTQX8NvyYpS3tuHwv8w,2630
+spectre_core/capture_configs/_capture_templates.py,sha256=3LtPR0hupHAbUJ4an-BCHWMKyAKkkl0YxdByOSeSzZo,7736
+spectre_core/capture_configs/_parameters.py,sha256=HcbMklmBHW0SVP6joiPLVpE8wTl4EZlf6sBHoVCaML8,3498
+spectre_core/capture_configs/_pconstraints.py,sha256=262ocQn11v3sJIiaQ-5Ihr4ZoLGTH2_pyFSA2dJb_pc,3241
+spectre_core/capture_configs/_ptemplates.py,sha256=eDB2FGKpRUUVcxwZ85wha8wLoNjldqYjwiw571ALl1o,23578
+spectre_core/capture_configs/_pvalidators.py,sha256=Or-eivBb505Ry0WqEqvjpKZgNZQ8r4pGGXqp7HMZwiA,7188
+spectre_core/config/__init__.py,sha256=wvp2MoslBupWB0kfKEnuB6PAlqx_nGGZBRQgKnqOraU,532
+spectre_core/config/_paths.py,sha256=n6ZUtQuRiDBb1Nw4LSNROlOlLTCheGaPzC40MChvXYI,2373
+spectre_core/config/_time_formats.py,sha256=Z1kiVBViEY2hkFw1vf0jl0vQ7y-5EUKJIzqQsbeIboQ,474
+spectre_core/logging/__init__.py,sha256=bdfcLby8VMDXI1aGg5VqJK7NPx20HIyMg5DUIVEYw80,370
+spectre_core/logging/_configure.py,sha256=HCPgggYNsevGq2Tv5-tX7ufdezH-L3Sc0yxrnTpdpJ8,1252
+spectre_core/logging/_decorators.py,sha256=89vJ_JZhfL7Azg2iFxMbj22c3Ajetgv6TOBkArTzx4A,639
+spectre_core/logging/_log_handlers.py,sha256=0vmkH2ekUTiJMafTncGyaF3T3XXf7DLKcJDIsUYEkvY,4884
+spectre_core/plotting/__init__.py,sha256=eYovaSQfdadspCTItTDyAhznLegXWifpki7c3RRjh3I,310
+spectre_core/plotting/_base.py,sha256=cXHKk15NwWt0lJADwndxWM5mXUTMj23qzVIlEvpwA1E,5339
+spectre_core/plotting/_format.py,sha256=3nB3xiiCjjerxkfMdhcOoeknLb2FimoN5sPPkrp1LQw,532
+spectre_core/plotting/_panel_stack.py,sha256=T1aASyTJEeJcSzy3vkxLcrFg5SpyVnPjV_0mS5t1W8A,5023
+spectre_core/plotting/_panels.py,sha256=isoh4AirGWT8wUFXiJ91NbqjzaVAK5iMI0ZUXoBlgWA,8658
+spectre_core/post_processing/__init__.py,sha256=SjRDqFd5rON2SdV7IpwV7yBufJx38n1NPlyJDPHtVcE,494
+spectre_core/post_processing/_base.py,sha256=--iWX86l2T6DmsQD4-UPfUIv494Y4QGDftzsuwdnudY,4932
+spectre_core/post_processing/_factory.py,sha256=Bn9wZgyBIGIWyeV7RTS6zAHuDDtrc43InxjJrBi1urA,1131
+spectre_core/post_processing/_post_processor.py,sha256=THIOtcm98GPTt-QSZ6kbgQDLFpeoaiNRuQpRLPjGTOA,1425
+spectre_core/post_processing/_register.py,sha256=DwlkU92IFkZ1_qvGfhep_OfuqTOIR_efY5qFpn1perw,498
+spectre_core/post_processing/library/_fixed_center_frequency.py,sha256=7HtkiwHbwGkYRYEsl0s4SVxi85-9rbmR3hdq1omESm8,4417
+spectre_core/post_processing/library/_swept_center_frequency.py,sha256=kE1NqdwL0ynFPOBOJH9m4fjzGDt7Xm7B6EYvbptJwCo,18632
+spectre_core/receivers/__init__.py,sha256=ZYoKKkv6ml8mOAYameUmuh2b6UESmnGeVMe8fR2wZHs,553
+spectre_core/receivers/_base.py,sha256=hBNs0om8g7uaTNEOuSZE4OVCII8q37rwrmOBNHOKeCw,5011
+spectre_core/receivers/_factory.py,sha256=3P1bxNnt4OxQS0tRNUEZ0Wc1iGc0hgjE9_qS8fGJPRM,822
+spectre_core/receivers/_register.py,sha256=xHcRnT-3NQxyIWL3nyT3P9qT14Wl5liM9HbflOvOUAM,617
+spectre_core/receivers/_spec_names.py,sha256=RlQzzD10V0-_ZyqaMUmG9LCoSLGAzyxmQ_eS7e6qvqY,936
+spectre_core/receivers/gr/__init__.py,sha256=oFSWmGoXQLK5X5xHvWzTdNr9amuaiiGjZirXZVogACU,154
+spectre_core/receivers/gr/_base.py,sha256=IcmiWOuUeSR2s4SoIbubHJGBTEQflawvMj2ivRT-pNY,883
+spectre_core/receivers/gr/_rsp1a.py,sha256=axPq2WXsxXAttQ2iaK8b3EfuOs_PDBmdaytnbUrq7oY,7226
+spectre_core/receivers/gr/_rspduo.py,sha256=bA3jBfZMxfmZE7oWaAKHI7O3jgvipN4kXW7yxfO0fXg,10856
+spectre_core/receivers/gr/_test.py,sha256=RSbmgiAFkIjRSwxCBwYpRNFIw6lhF5iyWEul__g6qJo,5897
+spectre_core/receivers/library/_rsp1a.py,sha256=a1BY27MzFgrSMH3zf2BbQxwYMRfcl1WZmX6FURe7-04,2533
+spectre_core/receivers/library/_rspduo.py,sha256=T5NIOsyEO1eiS7V44L-GtZSLWp6B6me_7jtusyCX2YQ,3180
+spectre_core/receivers/library/_sdrplay_receiver.py,sha256=br8uX_m-vpZB1Z-TZtSTHREoNm3YMhiL_Kx5BqU0LUM,6334
+spectre_core/receivers/library/_test.py,sha256=hiF904yd6_A1xB9Hj9cARCXHWLrZYX6O9AIhl5ezTIk,8278
+spectre_core/spectrograms/__init__.py,sha256=3_BmRi41isVW8oEM_-Ce61eg9kaF_WUZFNciITTDlhY,721
+spectre_core/spectrograms/_analytical.py,sha256=MyJ1t4QRpbaF0RRvA8thc5SQHTRSKowOEe36uwmzasU,8958
+spectre_core/spectrograms/_array_operations.py,sha256=H0TC2G_cos-LQ6_kqjJ9iIw7Kb9zXq9FQ46g2doISDs,4945
+spectre_core/spectrograms/_spectrogram.py,sha256=gzda7NqlaIU1grocXY3dplQcJZoK15EHxKMFFFMufGo,21946
+spectre_core/spectrograms/_transform.py,sha256=xTpuZ8-tXVfc_icQcpPfOLtt3wtuePiS4t97fWjZ4Oc,11373
+spectre_core/wgetting/__init__.py,sha256=dP7qu__escq8w47x0fRCa4gd481f1Bv4drGTo8b7AEQ,301
+spectre_core/wgetting/_callisto.py,sha256=8a0KGFr8BJVa0RhGd9w_NMzL2PulMbtBsBQKcCR4E9Q,4571
+spectre_core-0.0.12.dist-info/LICENSE,sha256=OXLcl0T2SZ8Pmy2_dmlvKuetivmyPd5m1q-Gyd-zaYY,35149
+spectre_core-0.0.12.dist-info/METADATA,sha256=S7zzpU5aAoYjbE_G-RUf1pPLWZCf8GY_uW1ImnK3GxA,42151
+spectre_core-0.0.12.dist-info/WHEEL,sha256=PZUExdf71Ui_so67QXpySuHtCi3-J3wvF4ORK6k_S8U,91
+spectre_core-0.0.12.dist-info/top_level.txt,sha256=-UsyjpFohXgZpgcZ9QbVeXhsIyF3Am8RxNFNDV_Ta2Y,13
+spectre_core-0.0.12.dist-info/RECORD,,

spectre_core/chunks/__init__.py

@@ -1,22 +0,0 @@
-# SPDX-FileCopyrightText: © 2024 Jimmy Fitzpatrick <jcfitzpatrick12@gmail.com>
-# This file is part of SPECTRE
-# SPDX-License-Identifier: GPL-3.0-or-later
-
-# decorators run on import
-from .library._fixed_center_frequency import _Chunk
-from .library._swept_center_frequency import _Chunk
-from .library._callisto import _Chunk
-
-from ._base import BaseChunk, ChunkFile
-from ._factory import get_chunk_from_tag
-from ._chunks import Chunks
-from .library._swept_center_frequency import SweepMetadata
-
-__all__ = [
-    "BaseChunk",
-    "ChunkFile",
-    "get_chunk_from_tag",
-    "Chunks",
-    "SweepMetadata"
-]
-

spectre_core/chunks/_base.py

@@ -1,116 +0,0 @@
-# SPDX-FileCopyrightText: © 2024 Jimmy Fitzpatrick <jcfitzpatrick12@gmail.com>
-# This file is part of SPECTRE
-# SPDX-License-Identifier: GPL-3.0-or-later
-
-from datetime import datetime
-from typing import Optional
-
-from spectre_core._file_io import BaseFileHandler
-from spectre_core.config import get_chunks_dir_path, TimeFormats
-from spectre_core.exceptions import ChunkFileNotFoundError
-
-class ChunkFile(BaseFileHandler):
-    def __init__(self, 
-                 chunk_parent_path: str, 
-                 chunk_name: str, 
-                 extension: str, 
-                 **kwargs):
-        self._chunk_start_time, self._tag = chunk_name.split("_")
-        self._chunk_start_datetime: Optional[datetime] = None
-        super().__init__(chunk_parent_path, 
-                         chunk_name, 
-                         extension = extension, 
-                         **kwargs)
-
-
-    @property
-    def chunk_start_time(self) -> str:
-        return self._chunk_start_time
-    
-
-    @property
-    def tag(self) -> str:
-        return self._tag
-    
-
-    @property
-    def chunk_start_datetime(self) -> datetime:
-        if self._chunk_start_datetime is None:
-            self._chunk_start_datetime = datetime.strptime(self.chunk_start_time, TimeFormats.DATETIME)
-        return self._chunk_start_datetime
-    
-
-
-class BaseChunk:
-    def __init__(self, 
-                 chunk_start_time: str, 
-                 tag: str):
-        self._chunk_start_time: str = chunk_start_time
-        self._tag: str = tag
-        self._chunk_files: dict[str, ChunkFile] = {}
-        self._chunk_start_datetime: Optional[datetime] = None
-        self.chunk_parent_path: str = get_chunks_dir_path(year = self.chunk_start_datetime.year,
-                                                          month = self.chunk_start_datetime.month,
-                                                          day = self.chunk_start_datetime.day)
-        self._chunk_name: str = f"{self.chunk_start_time}_{self.tag}"
-
-
-    @property
-    def chunk_start_time(self) -> str:
-        return self._chunk_start_time
-
-
-    @property
-    def tag(self) -> str:
-        return self._tag
-      
-
-    @property
-    def chunk_start_datetime(self) -> datetime:
-        if self._chunk_start_datetime is None:
-            self._chunk_start_datetime = datetime.strptime(self.chunk_start_time, TimeFormats.DATETIME)
-        return self._chunk_start_datetime
-
-
-    @property
-    def chunk_name(self) -> str:
-        return f"{self._chunk_start_time}_{self._tag}"
-    
-
-    @property
-    def extensions(self) -> list[str]:
-        return list(self._chunk_files.keys())
-    
-    
-    def add_file(self, chunk_file: ChunkFile) -> None:
-        self._chunk_files[chunk_file.extension] = chunk_file
-    
-
-    def get_file(self, extension: str) -> ChunkFile:
-        try:
-            return self._chunk_files[extension]
-        except KeyError:
-            raise ChunkFileNotFoundError(f"No chunk file found with extension '{extension}'")
-
-
-    def read_file(self, extension: str):
-        chunk_file = self.get_file(extension)
-        return chunk_file.read()
-
-
-    def delete_file(self, extension: str, **kwargs):
-        chunk_file = self.get_file(extension)
-        try:
-            chunk_file.delete(**kwargs)
-        except FileNotFoundError as e:
-            raise ChunkFileNotFoundError(str(e))
-
-
-    def has_file(self, extension: str) -> bool:
-        try:
-            chunk_file = self.get_file(extension)
-            return chunk_file.exists
-        except ChunkFileNotFoundError:
-            return False
-
-

spectre_core/chunks/_chunks.py

@@ -1,200 +0,0 @@
-# SPDX-FileCopyrightText: © 2024 Jimmy Fitzpatrick <jcfitzpatrick12@gmail.com>
-# This file is part of SPECTRE
-# SPDX-License-Identifier: GPL-3.0-or-later
-
-from logging import getLogger
-_LOGGER = getLogger(__name__)
-
-import os
-from typing import Optional
-from collections import OrderedDict
-import warnings
-from datetime import datetime
-
-from spectre_core.spectrograms import Spectrogram, time_chop, join_spectrograms
-from spectre_core.config import get_chunks_dir_path, TimeFormats
-from spectre_core.exceptions import (
-    SpectrogramNotFoundError,
-    ChunkNotFoundError
-)
-from ._base import BaseChunk
-from ._factory import get_chunk_from_tag
-
-class Chunks:
-    def __init__(self, 
-                 tag: str,
-                 year: Optional[int] = None, 
-                 month: Optional[int] = None, 
-                 day: Optional[int] = None):
-        self._tag = tag
-        self._Chunk = get_chunk_from_tag(tag)
-        self._chunk_map: dict[str, BaseChunk] = OrderedDict()
-        self._chunk_list: list[BaseChunk] = []
-        self._chunk_names: list[str] = []
-        self.set_date(year, month, day)
-
-
-    @property
-    def year(self) -> int:
-        return self._year
-
-
-    @property 
-    def month(self) -> int:
-        return self._month
-    
-
-    @property
-    def day(self) -> int:
-        return self._day
-
-
-    @property
-    def chunks_dir_path(self) -> str:
-        return get_chunks_dir_path(self.year, self.month, self.day)
-    
-
-    @property 
-    def chunk_map(self) -> dict[str, BaseChunk]:
-        return self._chunk_map
-    
-
-    @property
-    def chunk_list(self) -> list[BaseChunk]:
-        return  self._chunk_list
-    
-
-    @property
-    def chunk_names(self) -> list[str]:
-        return self._chunk_names
-
-
-    @property
-    def num_chunks(self) -> int:
-        return len(self.chunk_list)
-
-
-    def set_date(self, 
-                 year: Optional[int],
-                 month: Optional[int],
-                 day: Optional[int]) -> None:
-        self._year = year
-        self._month = month
-        self._day = day
-        self._update_chunk_map()
-
-
-    def _update_chunk_map(self) -> None:
-        self._chunk_map = OrderedDict() # reset cache
-        self._chunk_list = [] # reset cache
-        self._chunk_names = [] # reset cache
-
-        chunk_files = [f for (_, _, files) in os.walk(self.chunks_dir_path) for f in files]
-        
-        if len(chunk_files) == 0:
-            warning_message = "No chunks found, setting chunk map with empty dictionary."
-            _LOGGER.warning(warning_message)
-            warnings.warn(warning_message)
-            return
-        
-        for chunk_file in chunk_files:
-            file_name, _ = os.path.splitext(chunk_file)
-            chunk_start_time, tag = file_name.split("_", 1)
-            if tag == self._tag:
-                self._chunk_map[chunk_start_time] = self._Chunk(chunk_start_time, tag)
-        
-        self._chunk_map = OrderedDict(sorted(self._chunk_map.items()))
-        self._chunk_names = list(self._chunk_map.keys())
-        self._chunk_list = list(self._chunk_map.values())
-
-
-    def update(self) -> None:
-        """Public alias for setting chunk map"""
-        self._update_chunk_map()
-    
-
-    def __iter__(self):
-        yield from self.chunk_list
-
-
-    def _get_chunk_by_chunk_start_time(self, 
-                                      chunk_start_time: str) -> BaseChunk:
-        try:
-            return self.chunk_map[chunk_start_time]
-        except KeyError:
-            raise ChunkNotFoundError(f"Chunk with chunk start time {chunk_start_time} could not be found within {self.chunks_dir_path}")
-
-
-    def _get_chunk_by_index(self, 
-                           chunk_index: int) -> BaseChunk:
-        num_chunks = len(self.chunk_map)
-        if num_chunks == 0:
-            raise ChunkNotFoundError("No chunks are available")
-        index = chunk_index % num_chunks  # Use modulo to make the index wrap around. Allows the user to iterate over all the chunks via index cyclically.
-        return self.chunk_list[index]
-
-
-    def __getitem__(self, subscript: str | int):
-        if isinstance(subscript, str):
-            return self._get_chunk_by_chunk_start_time(subscript)
-        elif isinstance(subscript, int):
-            return self._get_chunk_by_index(subscript)
-
-
-    def get_index_by_chunk(self, 
-                           chunk_to_match: BaseChunk) -> int:
-        for i, chunk in enumerate(self):
-            if chunk.chunk_start_time == chunk_to_match.chunk_start_time:
-                return i
-        raise ChunkNotFoundError(f"No matching chunk found for chunk {chunk_to_match.chunk_name}")
-    
-
-    def count_chunk_files(self, 
-                          extension: str) -> int:
-        return sum(1 for chunk_file in self if chunk_file.has_file(extension))
-
-
-    def get_spectrogram_from_range(self, 
-                                   start_time: str, 
-                                   end_time: str) -> Spectrogram:
-        # Convert input strings to datetime objects
-        start_datetime = datetime.strptime(start_time, TimeFormats.DATETIME)
-        end_datetime = datetime.strptime(end_time, TimeFormats.DATETIME)
-
-        if start_datetime.day != end_datetime.day:
-            warning_message = "Joining spectrograms across multiple days"
-            _LOGGER.warning(warning_message)
-            warnings.warn(warning_message, RuntimeWarning)
-
-        spectrograms = []
-        num_fits_chunks = self.count_chunk_files("fits")
-
-        for i, chunk in enumerate(self):
-            # skip chunks without fits files
-            if not chunk.has_file("fits"):
-                continue
-            
-            # rather than reading all files to evaluate the actual upper bound to their time range (slow)
-            # place an upper bound by using the chunk start datetime for the next chunk
-            # this assumes that the chunks are non-overlapping (reasonable assumption)
-            lower_bound = chunk.chunk_start_datetime
-            if i < num_fits_chunks:
-                next_chunk = self[i + 1]
-                upper_bound = next_chunk.chunk_start_datetime
-            # if there is no "next chunk" then we do have to read the file
-            else:
-                fits_chunk = chunk.get_file("fits")
-                upper_bound = fits_chunk.datetimes[-1]
-
-            # if the chunk overlaps with the input time range, then read the fits file
-            if start_datetime <= upper_bound and lower_bound <= end_datetime:
-                spectrogram = chunk.read_file("fits")
-                spectrogram = time_chop(spectrogram, start_time, end_time)
-                # if we have a non-empty spectrogram, append it to the list of spectrograms
-                if spectrogram:
-                    spectrograms.append(spectrogram)
-
-        if spectrograms:
-            return join_spectrograms(spectrograms)
-        else:
-            raise SpectrogramNotFoundError("No spectrogram data found for the given time range")

spectre_core/chunks/_factory.py

@@ -1,25 +0,0 @@
-# SPDX-FileCopyrightText: © 2024 Jimmy Fitzpatrick <jcfitzpatrick12@gmail.com>
-# This file is part of SPECTRE
-# SPDX-License-Identifier: GPL-3.0-or-later
-
-from spectre_core.capture_configs import CaptureConfig, PNames
-from spectre_core.exceptions import ChunkNotFoundError
-from ._register import chunk_map
-from ._base import BaseChunk
-
-def _get_chunk(chunk_key: str) -> BaseChunk:
-    Chunk = chunk_map.get(chunk_key)
-    if Chunk is None:
-        valid_chunk_keys = list(chunk_map.keys())
-        raise ChunkNotFoundError(f"No chunk found for the chunk key: {chunk_key}. Valid chunk keys are: {valid_chunk_keys}")
-    return Chunk
-
-def get_chunk_from_tag(tag: str) -> BaseChunk:
-    # if we are dealing with a callisto chunk, the chunk key is equal to the tag
-    if "callisto" in tag:
-        chunk_key = "callisto"
-    # otherwise, we fetch the chunk key from the capture config
-    else:
-        capture_config= CaptureConfig(tag)
-        chunk_key = capture_config.get_parameter_value(PNames.CHUNK_KEY)
-    return _get_chunk(chunk_key)

spectre_core-0.0.10.dist-info/RECORD

@@ -1,63 +0,0 @@
-spectre_core/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
-spectre_core/exceptions.py,sha256=3MhbhqRzPgVEx4Z4r6jdyhviQZ1n0GJChAl0aY3dhmA,566
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