spacr 1.0.6__py3-none-any.whl → 1.0.7__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- spacr/__init__.py +0 -9
- spacr/core.py +0 -357
- spacr/gui.py +2 -9
- spacr/gui_core.py +21 -28
- spacr/gui_elements.py +4 -1678
- spacr/gui_utils.py +3 -7
- spacr/resources/data/lopit.csv +3833 -3833
- spacr/resources/icons/flow_chart_v3.png +0 -0
- spacr/resources/icons/logo_spacr.png +0 -0
- {spacr-1.0.6.dist-info → spacr-1.0.7.dist-info}/METADATA +1 -1
- {spacr-1.0.6.dist-info → spacr-1.0.7.dist-info}/RECORD +15 -15
- {spacr-1.0.6.dist-info → spacr-1.0.7.dist-info}/entry_points.txt +0 -3
- {spacr-1.0.6.dist-info → spacr-1.0.7.dist-info}/LICENSE +0 -0
- {spacr-1.0.6.dist-info → spacr-1.0.7.dist-info}/WHEEL +0 -0
- {spacr-1.0.6.dist-info → spacr-1.0.7.dist-info}/top_level.txt +0 -0
spacr/gui_utils.py
CHANGED
@@ -463,14 +463,13 @@ def function_gui_wrapper(function=None, settings={}, q=None, fig_queue=None, imp
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def run_function_gui(settings_type, settings, q, fig_queue, stop_requested):
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from .core import generate_image_umap, preprocess_generate_masks
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-
from .spacr_cellpose import identify_masks_finetune, check_cellpose_models
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+
from .spacr_cellpose import identify_masks_finetune, check_cellpose_models
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from .submodules import analyze_recruitment
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from .ml import generate_ml_scores, perform_regression
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from .submodules import train_cellpose, analyze_plaques
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-
from .io import process_non_tif_non_2D_images
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+
from .io import process_non_tif_non_2D_images
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from .measure import measure_crop
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-
from .
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-
from .deep_spacr import deep_spacr, apply_model_to_tar
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+
from .deep_spacr import deep_spacr
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from .sequencing import generate_barecode_mapping
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process_stdout_stderr(q)
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@@ -483,9 +482,6 @@ def run_function_gui(settings_type, settings, q, fig_queue, stop_requested):
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elif settings_type == 'measure':
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function = measure_crop
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imports = 1
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-
elif settings_type == 'simulation':
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function = run_multiple_simulations
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-
imports = 1
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elif settings_type == 'classify':
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function = deep_spacr
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imports = 1
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